CmoCh17G006430 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G006430
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Auxin responsive SAUR protein
Location	Cmo_Chr17: 6695908 .. 6696282 (+)
RNA-Seq Expression	CmoCh17G006430
Synteny	CmoCh17G006430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAAAGCTGGAGGAACTCTCACCAAGCTCAAGTCCGCCATTAAACGATGGCCCTCGATCTCCAAGCTCGGTCGGAGCTCTAGCTCCGTGTCGGTTGCTGCTGTGAGCAACTGTGCCAATATTGGCGAGGACATCTCTAAGGAGCTTCACACGGTCTACGTCGGTAAGTCTCGACGTCCGTATTTTGTCAGCTTAGATGTCATAGCACACCCTCTATTTCAAGAGTTGGTCGATAAGTCAATGTCTGACAACGACGGCGCAGTGGTCGTCTCTTGTGAAGTGGTCATGTTTGAACATTTGTTGTGGATGTTGGAAAATGCCGCAACCCAATTGGGGTCGACGGAGGAACTCGTCGAGTTTTACACTTGTTGA

mRNA sequence

ATGGTCAAAGCTGGAGGAACTCTCACCAAGCTCAAGTCCGCCATTAAACGATGGCCCTCGATCTCCAAGCTCGGTCGGAGCTCTAGCTCCGTGTCGGTTGCTGCTGTGAGCAACTGTGCCAATATTGGCGAGGACATCTCTAAGGAGCTTCACACGGTCTACGTCGGTAAGTCTCGACGTCCGTATTTTGTCAGCTTAGATGTCATAGCACACCCTCTATTTCAAGAGTTGGTCGATAAGTCAATGTCTGACAACGACGGCGCAGTGGTCGTCTCTTGTGAAGTGGTCATGTTTGAACATTTGTTGTGGATGTTGGAAAATGCCGCAACCCAATTGGGGTCGACGGAGGAACTCGTCGAGTTTTACACTTGTTGA

Coding sequence (CDS)

ATGGTCAAAGCTGGAGGAACTCTCACCAAGCTCAAGTCCGCCATTAAACGATGGCCCTCGATCTCCAAGCTCGGTCGGAGCTCTAGCTCCGTGTCGGTTGCTGCTGTGAGCAACTGTGCCAATATTGGCGAGGACATCTCTAAGGAGCTTCACACGGTCTACGTCGGTAAGTCTCGACGTCCGTATTTTGTCAGCTTAGATGTCATAGCACACCCTCTATTTCAAGAGTTGGTCGATAAGTCAATGTCTGACAACGACGGCGCAGTGGTCGTCTCTTGTGAAGTGGTCATGTTTGAACATTTGTTGTGGATGTTGGAAAATGCCGCAACCCAATTGGGGTCGACGGAGGAACTCGTCGAGTTTTACACTTGTTGA

Protein sequence

MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSMSDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVEFYTC

Homology

[Close]

BLAST of CmoCh17G006430 vs. ExPASy Swiss-Prot
Match: Q9LQI6 (Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.6e-27
Identity = 69/134 (51.49%), Postives = 90/134 (67.16%), Query Frame = 0


Query: 6   GTLTKLKSAIKRWPSISKLGRS---SSSVSVAAVSNCANIGEDISKELHTVYVGKSRRPY 65
           G LTKLKSAIK+WPS++K   S   ++S +V+ VS C        ++LH VYVGKSRRPY
Sbjct: 5   GKLTKLKSAIKKWPSLTKNHHSTMCTASTAVSEVSKC--------EDLHVVYVGKSRRPY 64

Query: 66  FVSLDVIAHPLFQELVDKSM-----SDNDGAVVVSCEVVMFEHLLWMLENAAT------- 124
            +S  VIAHPLFQEL+D+S        +   V+V+CEVV+FEHLLWML+N+++       
Sbjct: 65  MLSSHVIAHPLFQELLDRSSRFIEERHDQETVLVACEVVLFEHLLWMLKNSSSDHGDEDD 124

[Close]

BLAST of CmoCh17G006430 vs. ExPASy Swiss-Prot
Match: Q9C9E1 (Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-26
Identity = 68/121 (56.20%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 6   GTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRRPYFVS 65
           G LTKLKSA+K+WPS +K      S S AAVS+   + ED    LH VYVG++RRPY + 
Sbjct: 5   GKLTKLKSAMKKWPSFAK--NHHHSTSSAAVSD--ELSED--NNLHVVYVGQTRRPYMLR 64

Query: 66  LDVIAHPLFQELVDKSMS---DNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVEFY 124
            D+I+HPLFQELVD+S S   + D  +VV+CEVV+FEHLLWML+ +  + GS EEL EFY
Sbjct: 65  PDIISHPLFQELVDRSSSRSIEQDREIVVACEVVLFEHLLWMLK-SGQEGGSVEELAEFY 118

[Close]

BLAST of CmoCh17G006430 vs. ExPASy Swiss-Prot
Match: Q29PU2 (Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.6e-21
Identity = 60/129 (46.51%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRR 60
           M K G  L KLKS +K+  S +   + +   +    S  + +    S++L TVYVG++RR
Sbjct: 1   MAKGGNKLMKLKSVLKKLNSFNT--KPNQPPAQTNHSRSSAVSAFPSEDLQTVYVGRTRR 60

Query: 61  PYFVSLDVIAHPLFQEL--VDKSMSDNDGAVVVSCEVVMFEHLLWMLENA---ATQLGST 120
            Y VS DV++HPLFQ+L  VD      DG++ VSCEVV+FEHLLWMLENA    ++  S 
Sbjct: 61  TYHVSSDVVSHPLFQQLAAVDGGCGSEDGSISVSCEVVLFEHLLWMLENADADESRPESV 120

Query: 121 EELVEFYTC 125
            ELVEFY C
Sbjct: 121 YELVEFYAC 127

[Close]

BLAST of CmoCh17G006430 vs. ExPASy TrEMBL
Match: A0A6J1GNV0 (uncharacterized protein LOC111456121 OS=Cucurbita moschata OX=3662 GN=LOC111456121 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRR 60
           MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRR
Sbjct: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRR 60

Query: 61  PYFVSLDVIAHPLFQELVDKSMSDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120
           PYFVSLDVIAHPLFQELVDKSMSDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE
Sbjct: 61  PYFVSLDVIAHPLFQELVDKSMSDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120

Query: 121 FYTC 125
           FYTC
Sbjct: 121 FYTC 124

[Close]

BLAST of CmoCh17G006430 vs. ExPASy TrEMBL
Match: A0A6J1JXK2 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111488746 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 7.3e-57
Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRR 60
           MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVS+ ANI E+ISKELHTVYVGKSRR
Sbjct: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSDGANIDENISKELHTVYVGKSRR 60

Query: 61  PYFVSLDVIAHPLFQELVDKSMSDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120
           PYFVSLDVIAHPLFQELVDKS SDND AVVVSCEVVMFEHLLWMLENAATQLGSTEELVE
Sbjct: 61  PYFVSLDVIAHPLFQELVDKSSSDNDSAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120

Query: 121 FYTC 125
           FYTC
Sbjct: 121 FYTC 124

[Close]

BLAST of CmoCh17G006430 vs. ExPASy TrEMBL
Match: A0A0A0KAQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448680 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.6e-50
Identity = 111/126 (88.10%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDI-SKELHTVYVGKSR 60
           MVKA GTLTKLKSAIKRWPSI+KLGRSSSSVSVAAVS+ AN+GE+I SKEL TVYVGKSR
Sbjct: 1   MVKA-GTLTKLKSAIKRWPSITKLGRSSSSVSVAAVSDGANVGENINSKELRTVYVGKSR 60

Query: 61  RPYFVSLDVIAHPLFQELVDKSMS-DNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEEL 120
           RPYFVSLDV+ HPLFQELVDKS S D DG +VVSCEVVMFEHLLWMLENAATQLGSTEEL
Sbjct: 61  RPYFVSLDVVTHPLFQELVDKSSSFDEDGELVVSCEVVMFEHLLWMLENAATQLGSTEEL 120

Query: 121 VEFYTC 125
           VEFYTC
Sbjct: 121 VEFYTC 125

[Close]

BLAST of CmoCh17G006430 vs. ExPASy TrEMBL
Match: A0A5D3BXT3 (Auxin responsive SAUR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001520 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48
Identity = 108/126 (85.71%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDI-SKELHTVYVGKSR 60
           MVKA GTLTKLKSAIKRWPSI+KLGRSSSSVSVAAVS+  N+G++  SKEL TVYVGKSR
Sbjct: 1   MVKA-GTLTKLKSAIKRWPSITKLGRSSSSVSVAAVSDGGNVGDNTNSKELRTVYVGKSR 60

Query: 61  RPYFVSLDVIAHPLFQELVDKSMS-DNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEEL 120
           RPYFVSLDV+ HPLFQELVDKS S D DG +VVSCEVVMFEHLLWMLENAATQLGSTEEL
Sbjct: 61  RPYFVSLDVVTHPLFQELVDKSSSFDEDGELVVSCEVVMFEHLLWMLENAATQLGSTEEL 120

Query: 121 VEFYTC 125
           VEFYTC
Sbjct: 121 VEFYTC 125

[Close]

BLAST of CmoCh17G006430 vs. ExPASy TrEMBL
Match: A0A1S3CI22 (uncharacterized protein LOC103500661 OS=Cucumis melo OX=3656 GN=LOC103500661 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48
Identity = 108/126 (85.71%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDI-SKELHTVYVGKSR 60
           MVKA GTLTKLKSAIKRWPSI+KLGRSSSSVSVAAVS+  N+G++  SKEL TVYVGKSR
Sbjct: 1   MVKA-GTLTKLKSAIKRWPSITKLGRSSSSVSVAAVSDGGNVGDNTNSKELRTVYVGKSR 60

Query: 61  RPYFVSLDVIAHPLFQELVDKSMS-DNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEEL 120
           RPYFVSLDV+ HPLFQELVDKS S D DG +VVSCEVVMFEHLLWMLENAATQLGSTEEL
Sbjct: 61  RPYFVSLDVVTHPLFQELVDKSSSFDEDGELVVSCEVVMFEHLLWMLENAATQLGSTEEL 120

Query: 121 VEFYTC 125
           VEFYTC
Sbjct: 121 VEFYTC 125

[Close]

BLAST of CmoCh17G006430 vs. NCBI nr
Match: XP_022953657.1 (uncharacterized protein LOC111456121 [Cucurbita moschata])

HSP 1 Score: 245.4 bits (625), Expect = 2.7e-61
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRR 60
           MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRR
Sbjct: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRR 60

Query: 61  PYFVSLDVIAHPLFQELVDKSMSDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120
           PYFVSLDVIAHPLFQELVDKSMSDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE
Sbjct: 61  PYFVSLDVIAHPLFQELVDKSMSDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120

Query: 121 FYTC 125
           FYTC
Sbjct: 121 FYTC 124

[Close]

BLAST of CmoCh17G006430 vs. NCBI nr
Match: KAG6575422.1 (Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.3 bits (599), Expect = 2.8e-58
Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRR 60
           MVKAGGTLTKLKSAIKRWPSISKLGRSSSS+SVAAVS+ ANIGEDISKELHTVYVGKSRR
Sbjct: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRR 60

Query: 61  PYFVSLDVIAHPLFQELVDKSMSDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120
           PYFVSLDVIAHPLFQELVDKS SDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE
Sbjct: 61  PYFVSLDVIAHPLFQELVDKSASDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120

Query: 121 FYTC 125
           FYTC
Sbjct: 121 FYTC 124

[Close]

BLAST of CmoCh17G006430 vs. NCBI nr
Match: KAG7013963.1 (hypothetical protein SDJN02_24132, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235.0 bits (598), Expect = 3.6e-58
Identity = 119/124 (95.97%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRR 60
           MVKAGGTLTKLKSAIKRWPSISKLGRSSSS+SVAAVS+ ANIGEDISKELHTVYVGKSRR
Sbjct: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRR 60

Query: 61  PYFVSLDVIAHPLFQELVDKSMSDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120
           PYFVSLDVIAHPLFQELVDKS SDNDGAV+VSCEVVMFEHLLWMLENAATQLGSTEELVE
Sbjct: 61  PYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEHLLWMLENAATQLGSTEELVE 120

Query: 121 FYTC 125
           FYTC
Sbjct: 121 FYTC 124

[Close]

BLAST of CmoCh17G006430 vs. NCBI nr
Match: XP_022992444.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 229.6 bits (584), Expect = 1.5e-56
Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRR 60
           MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVS+ ANI E+ISKELHTVYVGKSRR
Sbjct: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSDGANIDENISKELHTVYVGKSRR 60

Query: 61  PYFVSLDVIAHPLFQELVDKSMSDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120
           PYFVSLDVIAHPLFQELVDKS SDND AVVVSCEVVMFEHLLWMLENAATQLGSTEELVE
Sbjct: 61  PYFVSLDVIAHPLFQELVDKSSSDNDSAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120

Query: 121 FYTC 125
           FYTC
Sbjct: 121 FYTC 124

[Close]

BLAST of CmoCh17G006430 vs. NCBI nr
Match: XP_023548428.1 (uncharacterized protein LOC111807083 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 1.8e-54
Identity = 116/120 (96.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRR 60
           MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVS+ ANI EDISKELHTVYVGKSRR
Sbjct: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSDGANIVEDISKELHTVYVGKSRR 60

Query: 61  PYFVSLDVIAHPLFQELVDKSMSDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120
           PYFVSLDVIAHPLFQELVDKS SDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE
Sbjct: 61  PYFVSLDVIAHPLFQELVDKSASDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120

[Close]

BLAST of CmoCh17G006430 vs. TAIR 10
Match: AT1G17345.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 121.3 bits (303), Expect = 5.4e-28
Identity = 69/134 (51.49%), Postives = 90/134 (67.16%), Query Frame = 0


Query: 6   GTLTKLKSAIKRWPSISKLGRS---SSSVSVAAVSNCANIGEDISKELHTVYVGKSRRPY 65
           G LTKLKSAIK+WPS++K   S   ++S +V+ VS C        ++LH VYVGKSRRPY
Sbjct: 5   GKLTKLKSAIKKWPSLTKNHHSTMCTASTAVSEVSKC--------EDLHVVYVGKSRRPY 64

Query: 66  FVSLDVIAHPLFQELVDKSM-----SDNDGAVVVSCEVVMFEHLLWMLENAAT------- 124
            +S  VIAHPLFQEL+D+S        +   V+V+CEVV+FEHLLWML+N+++       
Sbjct: 65  MLSSHVIAHPLFQELLDRSSRFIEERHDQETVLVACEVVLFEHLLWMLKNSSSDHGDEDD 124

[Close]

BLAST of CmoCh17G006430 vs. TAIR 10
Match: AT1G72430.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-27
Identity = 68/121 (56.20%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 6   GTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRRPYFVS 65
           G LTKLKSA+K+WPS +K      S S AAVS+   + ED    LH VYVG++RRPY + 
Sbjct: 5   GKLTKLKSAMKKWPSFAK--NHHHSTSSAAVSD--ELSED--NNLHVVYVGQTRRPYMLR 64

Query: 66  LDVIAHPLFQELVDKSMS---DNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVEFY 124
            D+I+HPLFQELVD+S S   + D  +VV+CEVV+FEHLLWML+ +  + GS EEL EFY
Sbjct: 65  PDIISHPLFQELVDRSSSRSIEQDREIVVACEVVLFEHLLWMLK-SGQEGGSVEELAEFY 118

[Close]

BLAST of CmoCh17G006430 vs. TAIR 10
Match: AT5G20820.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-22
Identity = 60/129 (46.51%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRR 60
           M K G  L KLKS +K+  S +   + +   +    S  + +    S++L TVYVG++RR
Sbjct: 1   MAKGGNKLMKLKSVLKKLNSFNT--KPNQPPAQTNHSRSSAVSAFPSEDLQTVYVGRTRR 60

Query: 61  PYFVSLDVIAHPLFQEL--VDKSMSDNDGAVVVSCEVVMFEHLLWMLENA---ATQLGST 120
            Y VS DV++HPLFQ+L  VD      DG++ VSCEVV+FEHLLWMLENA    ++  S 
Sbjct: 61  TYHVSSDVVSHPLFQQLAAVDGGCGSEDGSISVSCEVVLFEHLLWMLENADADESRPESV 120

Query: 121 EELVEFYTC 125
            ELVEFY C
Sbjct: 121 YELVEFYAC 127

[Close]

BLAST of CmoCh17G006430 vs. TAIR 10
Match: AT3G12955.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 39/113 (34.51%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 10  KLKSAIKRWPSIS-KLGRSSSSVSVAAVS-------NCANIGEDISKELH-TVYVGKSRR 69
           +L   ++R  S+S +LGRS S  S+ + S       +  ++ +  +  ++ TV VG++++
Sbjct: 6   RLMMMLRRCKSVSTQLGRSYSYTSLRSKSARRDPQDHLQDVDQSPTPSMYQTVLVGRTKK 65

Query: 70  PYFVSLDVIAHPLFQELVDKSM-----SDNDGA--VVVSCEVVMFEHLLWMLE 107
           PY +S   + HPL   LV+K        + DG+  + V CEVV+F+HLLWMLE
Sbjct: 66  PYLISKKHLKHPLLNALVEKQQRYEEDDNEDGSCIITVKCEVVLFDHLLWMLE 118

The following BLAST results are available for this feature:

BLAST of CmoCh17G006430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQI6	7.6e-27	51.49	Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 S...	[more]
Q9C9E1	1.7e-26	56.20	Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 S...	[more]
Q29PU2	1.6e-21	46.51	Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 S...	[more]

BLAST of CmoCh17G006430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GNV0	1.3e-61	100.00	uncharacterized protein LOC111456121 OS=Cucurbita moschata OX=3662 GN=LOC1114561...	[more]
A0A6J1JXK2	7.3e-57	95.16	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111488746...	[more]
A0A0A0KAQ4	6.6e-50	88.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448680 PE=3 SV=1	[more]
A0A5D3BXT3	1.6e-48	85.71	Auxin responsive SAUR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CI22	1.6e-48	85.71	uncharacterized protein LOC103500661 OS=Cucumis melo OX=3656 GN=LOC103500661 PE=...	[more]

BLAST of CmoCh17G006430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953657.1	2.7e-61	100.00	uncharacterized protein LOC111456121 [Cucurbita moschata]	[more]
KAG6575422.1	2.8e-58	96.77	Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7013963.1	3.6e-58	95.97	hypothetical protein SDJN02_24132, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022992444.1	1.5e-56	95.16	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]
XP_023548428.1	1.8e-54	96.67	uncharacterized protein LOC111807083 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh17G006430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17345.1	5.4e-28	51.49	SAUR-like auxin-responsive protein family	[more]
AT1G72430.1	1.2e-27	56.20	SAUR-like auxin-responsive protein family	[more]
AT5G20820.1	1.2e-22	46.51	SAUR-like auxin-responsive protein family	[more]
AT3G12955.1	1.1e-09	34.51	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 16..105 e-value: 1.8E-17 score: 63.3
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 6..124
None	No IPR available	PANTHER	PTHR31374:SF5	AUXIN-RESPONSIVE PROTEIN SAUR78	coord: 6..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G006430.1	CmoCh17G006430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin