CmoCh17G004540 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G004540
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	scarecrow-like protein 6
Location	Cmo_Chr17: 3141301 .. 3143472 (+)
RNA-Seq Expression	CmoCh17G004540
Synteny	CmoCh17G004540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCCATGCCCTTTCCTTACCCTTTTGATGACCTTCGTCCAAATGGGGTTTTGAATTTTTCCTCTGTTTCCGATTCTTCGCCGCCTCCCTTCCGCCGTCACAACCACCGTCAACACTGGAGTTCTACTGATAACACTAATCTGCTCAAACAGATTTGCTATGTGGGTGCTGCTGAACCCACCTCTGTTCTCGACACTAGAAGAAGCCCAAGCCCTCCCACTTCCACTTCCACACTGTCTTCCTCTCTCGGCGGCGGCGGCGGTGGTGGTGGTACTGCCTCCACCGACACTACCGTGGCGGCGCCGCAGTCTTCTCTCCCTGAAAACCCTTCTCCTTTAGATAAATGTGGCGGCGGAGGCGGCCTTGGAATGGATGATTGGGAGAGCGTTTTGCCGGAATCCCCTGGGCAAGGACCCTCCATTCTTGGGTTAATTATGGGTGATGTGGAAGACCCATCTCTTGGATTGAATAAACTCCTGCAGAGCGGCGGTGGCGGTGGCGGTGTTGGTGGTGGTGGTGGTGGTGATTCTCATCTGGACTTGGAATTCTCCGGGAGTTTTTCCGGTGTCGATCATGGGTTGGTGTTCGAACCCAATACTCTCGCCGGCGAGTCCATTGTCGACCCTTCTCTCCAAGCCCCATCTTATGCTAGACTTTCCGCCGCCGTGTCGAACTCGAACGCCATGTTTTCCGGCGTGTTTCAGAATCAAAATCAGCTGTCGGAGACCGTTGACGAGAAGCCACAGATTTTCAATTCTCCCCAAGTTATGATGAATCAAAATCAAACCCAGTTCACTCATAATCCACCTCTGTTTATGCCTCTTCCTTTTGCCTCTCCCGGCCAAGATCACCACCAGAACCACCACCACTTCCTCGGCGGTGTCCCGCCGACAAAACGGTTCAATTCCGGTCCGATTCCACCAAATTATCCAGTGAAATCACCATTTCTTGATTCGGGTCAAGAAAGTATCAATCGCAGACAACAACAACAACAACAGCCCCAACAAGTTCAGTTGTTTCCTCATCAGCAGCAGAGGCCATCCATGGCGGCCTTGGCCAAACAAAAAATGGTGAATGAAGACATAGCGAATCAACAACTCCAACAGGGCATCTCCGACCAGCTATTCAAGGCCGTAGAGCTGATCGAAACAGGCAATTCAGTTCTCGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCTTCCCCTATTGGGAAGCCCTTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCCTTGCAATCGCTCCTTCAAAACCCATCAAACCCCTCCAAACCTTCCCCTCTCAGCATCATTTTCAAAATCGCGGCCTACAAATCCTTCTCCGAAGTCTCCCCTGTTCTCCAATTTGCCAATTTCACCTCAAACCAAGCCCTCCTTGAGGCCTTTAACGGCTCCGGTCGGATTCACATCATCGACTTCGACATCGGCTACGGTGGTCAATGGGCTTCTCTAATGCAGGAGCTTGCCTTAAGAGGACCCCCATTTCTCAAAATCACTGCCTTTGCTTCCACTTCCACACACGACGATTTCGAGCTCGGTTTCACTCAAGAAAACCTCAAGAATTTCGCTAACGATCTCAACATTGGATTCGAGCTCGAAATCATAAACATCGAGTCTCTCAATTCTGGTTCATGGCCTCTAGCTCTTAATGTCTCTGAAAACGAAGCCATTGCAGTGAATCTCCCCGTTGGTTCCCTTTCATTGCCAATGATCCTCCGTTTCATAAAGCATCTTAACCCTAAAATCGTAGTGTCTGTCGACCGAGGCTGCAGCCGAGTCGATGCGCCATTCCCCCACCGTGTTATCCACGGTCTGCACTCATACTCGGCGCTGCTCGAATCCATGGAAGCTGTAACAGTGAATATGGATGCCCAGCTGAAAATTGAAAGGTACTTGGTGCAGCCATGTATCGAAAAAGTGGTGACGAGTTCTCAATGTTTGAACGAGAGGCTTCCGCCATTGAAATCGATGTTTTTGTCATCCGGGTTTTCGCCATTGACATTCAGTAACTTCACGGAGTCGCAGGCGGAGTGTCTGCTGCAGAGGACGCCAGTTCAGGGGTTCCATATCGACAAGAGACACTCCTCGCTTGTTCTATGCTGGCACCGGAAGGAGCTCGTTTCAATCTCTGCTTGGAGGTCTTGA

mRNA sequence

ATGAAGGCCATGCCCTTTCCTTACCCTTTTGATGACCTTCGTCCAAATGGGGTTTTGAATTTTTCCTCTGTTTCCGATTCTTCGCCGCCTCCCTTCCGCCGTCACAACCACCGTCAACACTGGAGTTCTACTGATAACACTAATCTGCTCAAACAGATTTGCTATGTGGGTGCTGCTGAACCCACCTCTGTTCTCGACACTAGAAGAAGCCCAAGCCCTCCCACTTCCACTTCCACACTGTCTTCCTCTCTCGGCGGCGGCGGCGGTGGTGGTGGTACTGCCTCCACCGACACTACCGTGGCGGCGCCGCAGTCTTCTCTCCCTGAAAACCCTTCTCCTTTAGATAAATGTGGCGGCGGAGGCGGCCTTGGAATGGATGATTGGGAGAGCGTTTTGCCGGAATCCCCTGGGCAAGGACCCTCCATTCTTGGGTTAATTATGGGTGATGTGGAAGACCCATCTCTTGGATTGAATAAACTCCTGCAGAGCGGCGGTGGCGGTGGCGGTGTTGGTGGTGGTGGTGGTGGTGATTCTCATCTGGACTTGGAATTCTCCGGGAGTTTTTCCGGTGTCGATCATGGGTTGGTGTTCGAACCCAATACTCTCGCCGGCGAGTCCATTGTCGACCCTTCTCTCCAAGCCCCATCTTATGCTAGACTTTCCGCCGCCGTGTCGAACTCGAACGCCATGTTTTCCGGCGTGTTTCAGAATCAAAATCAGCTGTCGGAGACCGTTGACGAGAAGCCACAGATTTTCAATTCTCCCCAAGTTATGATGAATCAAAATCAAACCCAGTTCACTCATAATCCACCTCTGTTTATGCCTCTTCCTTTTGCCTCTCCCGGCCAAGATCACCACCAGAACCACCACCACTTCCTCGGCGGTGTCCCGCCGACAAAACGGTTCAATTCCGGTCCGATTCCACCAAATTATCCAGTGAAATCACCATTTCTTGATTCGGGTCAAGAAAGTATCAATCGCAGACAACAACAACAACAACAGCCCCAACAAGTTCAGTTGTTTCCTCATCAGCAGCAGAGGCCATCCATGGCGGCCTTGGCCAAACAAAAAATGGTGAATGAAGACATAGCGAATCAACAACTCCAACAGGGCATCTCCGACCAGCTATTCAAGGCCGTAGAGCTGATCGAAACAGGCAATTCAGTTCTCGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCTTCCCCTATTGGGAAGCCCTTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCCTTGCAATCGCTCCTTCAAAACCCATCAAACCCCTCCAAACCTTCCCCTCTCAGCATCATTTTCAAAATCGCGGCCTACAAATCCTTCTCCGAAGTCTCCCCTGTTCTCCAATTTGCCAATTTCACCTCAAACCAAGCCCTCCTTGAGGCCTTTAACGGCTCCGGTCGGATTCACATCATCGACTTCGACATCGGCTACGGTGGTCAATGGGCTTCTCTAATGCAGGAGCTTGCCTTAAGAGGACCCCCATTTCTCAAAATCACTGCCTTTGCTTCCACTTCCACACACGACGATTTCGAGCTCGGTTTCACTCAAGAAAACCTCAAGAATTTCGCTAACGATCTCAACATTGGATTCGAGCTCGAAATCATAAACATCGAGTCTCTCAATTCTGGTTCATGGCCTCTAGCTCTTAATGTCTCTGAAAACGAAGCCATTGCAGTGAATCTCCCCGTTGGTTCCCTTTCATTGCCAATGATCCTCCGTTTCATAAAGCATCTTAACCCTAAAATCGTAGTGTCTGTCGACCGAGGCTGCAGCCGAGTCGATGCGCCATTCCCCCACCGTGTTATCCACGGTCTGCACTCATACTCGGCGCTGCTCGAATCCATGGAAGCTGTAACAGTGAATATGGATGCCCAGCTGAAAATTGAAAGGTACTTGGTGCAGCCATGTATCGAAAAAGTGGTGACGAGTTCTCAATGTTTGAACGAGAGGCTTCCGCCATTGAAATCGATGTTTTTGTCATCCGGGTTTTCGCCATTGACATTCAGTAACTTCACGGAGTCGCAGGCGGAGTGTCTGCTGCAGAGGACGCCAGTTCAGGGGTTCCATATCGACAAGAGACACTCCTCGCTTGTTCTATGCTGGCACCGGAAGGAGCTCGTTTCAATCTCTGCTTGGAGGTCTTGA

Coding sequence (CDS)

ATGAAGGCCATGCCCTTTCCTTACCCTTTTGATGACCTTCGTCCAAATGGGGTTTTGAATTTTTCCTCTGTTTCCGATTCTTCGCCGCCTCCCTTCCGCCGTCACAACCACCGTCAACACTGGAGTTCTACTGATAACACTAATCTGCTCAAACAGATTTGCTATGTGGGTGCTGCTGAACCCACCTCTGTTCTCGACACTAGAAGAAGCCCAAGCCCTCCCACTTCCACTTCCACACTGTCTTCCTCTCTCGGCGGCGGCGGCGGTGGTGGTGGTACTGCCTCCACCGACACTACCGTGGCGGCGCCGCAGTCTTCTCTCCCTGAAAACCCTTCTCCTTTAGATAAATGTGGCGGCGGAGGCGGCCTTGGAATGGATGATTGGGAGAGCGTTTTGCCGGAATCCCCTGGGCAAGGACCCTCCATTCTTGGGTTAATTATGGGTGATGTGGAAGACCCATCTCTTGGATTGAATAAACTCCTGCAGAGCGGCGGTGGCGGTGGCGGTGTTGGTGGTGGTGGTGGTGGTGATTCTCATCTGGACTTGGAATTCTCCGGGAGTTTTTCCGGTGTCGATCATGGGTTGGTGTTCGAACCCAATACTCTCGCCGGCGAGTCCATTGTCGACCCTTCTCTCCAAGCCCCATCTTATGCTAGACTTTCCGCCGCCGTGTCGAACTCGAACGCCATGTTTTCCGGCGTGTTTCAGAATCAAAATCAGCTGTCGGAGACCGTTGACGAGAAGCCACAGATTTTCAATTCTCCCCAAGTTATGATGAATCAAAATCAAACCCAGTTCACTCATAATCCACCTCTGTTTATGCCTCTTCCTTTTGCCTCTCCCGGCCAAGATCACCACCAGAACCACCACCACTTCCTCGGCGGTGTCCCGCCGACAAAACGGTTCAATTCCGGTCCGATTCCACCAAATTATCCAGTGAAATCACCATTTCTTGATTCGGGTCAAGAAAGTATCAATCGCAGACAACAACAACAACAACAGCCCCAACAAGTTCAGTTGTTTCCTCATCAGCAGCAGAGGCCATCCATGGCGGCCTTGGCCAAACAAAAAATGGTGAATGAAGACATAGCGAATCAACAACTCCAACAGGGCATCTCCGACCAGCTATTCAAGGCCGTAGAGCTGATCGAAACAGGCAATTCAGTTCTCGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCTTCCCCTATTGGGAAGCCCTTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCCTTGCAATCGCTCCTTCAAAACCCATCAAACCCCTCCAAACCTTCCCCTCTCAGCATCATTTTCAAAATCGCGGCCTACAAATCCTTCTCCGAAGTCTCCCCTGTTCTCCAATTTGCCAATTTCACCTCAAACCAAGCCCTCCTTGAGGCCTTTAACGGCTCCGGTCGGATTCACATCATCGACTTCGACATCGGCTACGGTGGTCAATGGGCTTCTCTAATGCAGGAGCTTGCCTTAAGAGGACCCCCATTTCTCAAAATCACTGCCTTTGCTTCCACTTCCACACACGACGATTTCGAGCTCGGTTTCACTCAAGAAAACCTCAAGAATTTCGCTAACGATCTCAACATTGGATTCGAGCTCGAAATCATAAACATCGAGTCTCTCAATTCTGGTTCATGGCCTCTAGCTCTTAATGTCTCTGAAAACGAAGCCATTGCAGTGAATCTCCCCGTTGGTTCCCTTTCATTGCCAATGATCCTCCGTTTCATAAAGCATCTTAACCCTAAAATCGTAGTGTCTGTCGACCGAGGCTGCAGCCGAGTCGATGCGCCATTCCCCCACCGTGTTATCCACGGTCTGCACTCATACTCGGCGCTGCTCGAATCCATGGAAGCTGTAACAGTGAATATGGATGCCCAGCTGAAAATTGAAAGGTACTTGGTGCAGCCATGTATCGAAAAAGTGGTGACGAGTTCTCAATGTTTGAACGAGAGGCTTCCGCCATTGAAATCGATGTTTTTGTCATCCGGGTTTTCGCCATTGACATTCAGTAACTTCACGGAGTCGCAGGCGGAGTGTCTGCTGCAGAGGACGCCAGTTCAGGGGTTCCATATCGACAAGAGACACTCCTCGCTTGTTCTATGCTGGCACCGGAAGGAGCTCGTTTCAATCTCTGCTTGGAGGTCTTGA

Protein sequence

MKAMPFPYPFDDLRPNGVLNFSSVSDSSPPPFRRHNHRQHWSSTDNTNLLKQICYVGAAEPTSVLDTRRSPSPPTSTSTLSSSLGGGGGGGGTASTDTTVAAPQSSLPENPSPLDKCGGGGGLGMDDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGGVGGGGGGDSHLDLEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPSYARLSAAVSNSNAMFSGVFQNQNQLSETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQNHHHFLGGVPPTKRFNSGPIPPNYPVKSPFLDSGQESINRRQQQQQQPQQVQLFPHQQQRPSMAALAKQKMVNEDIANQQLQQGISDQLFKAVELIETGNSVLAQGILARLNHQLSSPIGKPFQRAAFYFKEALQSLLQNPSNPSKPSPLSIIFKIAAYKSFSEVSPVLQFANFTSNQALLEAFNGSGRIHIIDFDIGYGGQWASLMQELALRGPPFLKITAFASTSTHDDFELGFTQENLKNFANDLNIGFELEIINIESLNSGSWPLALNVSENEAIAVNLPVGSLSLPMILRFIKHLNPKIVVSVDRGCSRVDAPFPHRVIHGLHSYSALLESMEAVTVNMDAQLKIERYLVQPCIEKVVTSSQCLNERLPPLKSMFLSSGFSPLTFSNFTESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSISAWRS

Homology

[Close]

BLAST of CmoCh17G004540 vs. ExPASy Swiss-Prot
Match: O81316 (Scarecrow-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=SCL6 PE=1 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 5.4e-133
Identity = 313/725 (43.17%), Postives = 404/725 (55.72%), Query Frame = 0


Query: 7   PYPFDDLRPNGVLNFSSVSDS--SPPPFRRHNHRQHWSSTDNTNLLKQICYVGAAEPTSV 66
           P PF++ +  G+  FSS S S   PP     +HR+     +          V AAEPTSV
Sbjct: 2   PLPFEEFQGKGISCFSSFSSSFPQPPSSPLLSHRKARGGEEEEE------EVPAAEPTSV 61

Query: 67  LDTRRSPSPPTSTSTLSSSLGGGG--GGGGTASTDTTVAAPQSSLPENPSPLDKCGGGGG 126
           LD+  S   PTS+ST+SSS GG    GGGG A+TD                 ++C   G 
Sbjct: 62  LDSLIS---PTSSSTVSSSHGGNSAVGGGGDATTD-----------------EQC---GA 121

Query: 127 LGMDDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGGVGGGGGGDSHLDL 186
           +G+ DWE  +P    Q  SILGLIMGD  DPSL LN +LQ+            G   +D 
Sbjct: 122 IGLGDWEEQVPHDHEQ--SILGLIMGDSTDPSLELNSILQTSPTFHDSDYSSPGFGVVDT 181

Query: 187 EFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPSYARLSAAVSNSNAMFSGVFQNQNQLS 246
            F     G+DH  V  P+ ++G                                      
Sbjct: 182 GF-----GLDHHSV-PPSHVSG-------------------------------------- 241

Query: 247 ETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQNHHHFLGGVPPTKRF 306
                         +++NQ+QT +T NP               + +HHH     PP KR 
Sbjct: 242 --------------LLINQSQTHYTQNPAAIF-----------YGHHHH---TPPPAKRL 301

Query: 307 NSGPIPPNYPVKSPFLDSGQESINRRQQQQQQPQQVQLFPHQQQRPSMAALAKQKMVNED 366
           N GP+                                                       
Sbjct: 302 NPGPV------------------------------------------------------- 361

Query: 367 IANQQLQQGISDQLFKAVELIETGNSVLAQGILARLNHQLSSPIGKPFQRAAFYFKEALQ 426
                   GI++QL KA E+IE+ ++ LAQGILARLN QLSSP+GKP +RAAFYFKEAL 
Sbjct: 362 --------GITEQLVKAAEVIES-DTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALN 421

Query: 427 SLLQNPSNPSKPSPLSIIFKIAAYKSFSEVSPVLQFANFTSNQALLEAFNGSGRIHIIDF 486
           +LL N S     +P S+IFKIAAYKSFSE+SPVLQFANFTSNQALLE+F+G  R+HIIDF
Sbjct: 422 NLLHNVSQTL--NPYSLIFKIAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDF 481

Query: 487 DIGYGGQWASLMQELALR---GPPFLKITAFASTSTHDDFELGFTQENLKNFANDLNIGF 546
           DIGYGGQWASLMQEL LR    P  LKIT FAS + HD  ELGFTQ+NLK+FA+++NI  
Sbjct: 482 DIGYGGQWASLMQELVLRDNAAPLSLKITVFASPANHDQLELGFTQDNLKHFASEINISL 541

Query: 547 ELEIINIESLNSGSWPLALNVSENEAIAVNLPVGSLS-LPMILRFIKHLNPKIVVSVDRG 606
           ++++++++ L S SWP   N SE EA+AVN+   S S LP++LRF+KHL+P I+V  DRG
Sbjct: 542 DIQVLSLDLLGSISWP---NSSEKEAVAVNISAASFSHLPLVLRFVKHLSPTIIVCSDRG 554

Query: 607 CSRVDAPFPHRVIHGLHSYSALLESMEAVTVNMDAQLKIERYLVQPCIEKVVTS-SQCLN 666
           C R D PF  ++ H LHS++AL ES++AV  N+DA  KIER+L+QP IEK+V   S+ + 
Sbjct: 602 CERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKIERFLIQPEIEKLVLDRSRPIE 554

Query: 667 ERLPPLKSMFLSSGFSPLTFSNFTESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVS 723
             +   ++MFL  GFSP+T SNFTESQAECL+QRTPV+GFH++K+H+SL+LCW R ELV 
Sbjct: 662 RPMMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTELVG 554

[Close]

BLAST of CmoCh17G004540 vs. ExPASy Swiss-Prot
Match: Q7XJM8 (Scarecrow-like protein 27 OS=Arabidopsis thaliana OX=3702 GN=SCL27 PE=2 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.8e-112
Identity = 319/750 (42.53%), Postives = 411/750 (54.80%), Query Frame = 0


Query: 7   PYPFDDLRPNGVLNFSSVSDSSPPPFRRHNHRQHWSSTDNTNLLKQ-ICYVGAA---EPT 66
           P  F+  +  GV   SS S  S       + ++ WS+ D T   ++ + YV      EPT
Sbjct: 2   PLSFERFQGEGVFGLSSSSFYS-------DSQKIWSNQDKTEAKQEDLGYVVGGFLPEPT 61

Query: 67  SVLDTRRSPSPPTSTSTLSSSLGGGGGGGGTASTDTTVAAPQSSLPENPSPLDKCGGGGG 126
           SVLD  RSPSP  S S+ +++L    GGGGT  T+TTV A       + +  +KC     
Sbjct: 62  SVLDALRSPSPLASYSSTTTTLSSSHGGGGTTVTNTTVTA------GDDNNNNKC---SQ 121

Query: 127 LGMDDWESVL-PESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGGVGGGGGGDSHLD 186
           +G+DD + VL   SPGQ  SIL LIM    DP           G   GV   G G     
Sbjct: 122 MGLDDLDGVLSASSPGQEQSILRLIM----DP-----------GSAFGVFDPGFG----- 181

Query: 187 LEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPSYARLSAAVS-NSNAMFSGVFQNQNQ 246
               GS SG                             +SA VS NSN + +  FQ    
Sbjct: 182 ---FGSGSG----------------------------PVSAPVSDNSNLLCNFPFQ---- 241

Query: 247 LSETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQNHHHFLGGVPPTK 306
                    +I N  + ++N +     +NPPL                        PP K
Sbjct: 242 ---------EITNPAEALINPSNHCLFYNPPL-----------------------SPPAK 301

Query: 307 RFNSGPI-PPNYPVKSPFLDSGQESINRRQQQQQQP----QQVQLFPHQQQRPSMAALAK 366
           RFNSG +  P +P+  P  D G + + RRQ Q Q P     Q Q FP      S  A+A 
Sbjct: 302 RFNSGSLHQPVFPLSDP--DPGHDPV-RRQHQFQFPFYHNNQQQQFPSSS---SSTAVAM 361

Query: 367 QKMVNEDIANQQLQQGISDQLFKAVELI-ETGN-----SVLAQGILARLNHQL--SSPIG 426
             + +  +A    Q  I +QLF A ELI  TGN     +VLAQGILARLNH L  SS   
Sbjct: 362 VPVPSPGMAGDD-QSVIIEQLFNAAELIGTTGNNNGDHTVLAQGILARLNHHLNTSSNHK 421

Query: 427 KPFQRAAFYFKEALQSLLQNPSNPSKPSPLSIIFKIAAYKSFSEVSPVLQFANFTSNQAL 486
            PFQRAA +  EAL SL+ N S+P   +P ++I +IAAY+SFSE SP LQF NFT+NQ++
Sbjct: 422 SPFQRAASHIAEALLSLIHNESSPPLITPENLILRIAAYRSFSETSPFLQFVNFTANQSI 481

Query: 487 LEAFNGSG--RIHIIDFDIGYGGQWASLMQELA-------LRGPPFLKITAFA--STSTH 546
           LE+ N SG  RIHIIDFD+GYGGQW+SLMQELA             LK+T FA   ++  
Sbjct: 482 LESCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKLTVFAPPPSTVS 541

Query: 547 DDFELGFTQENLKNFANDLNIGFELEIINIE-SLNSGSWPLALNVSENEAIAVNLPVGSL 606
           D+FEL FT+ENLK FA ++ I FE+E++++E  LN   WPL+L  SE EAIAVNLPV S+
Sbjct: 542 DEFELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEAIAVNLPVNSV 601

Query: 607 S---LPMILRFIKHLNPKIVVSVDRGCSRVDAPFPHRVIHGLHSYSALLESMEAVTVNMD 666
           +   LP+ILRF+K L+P IVV  DRGC R DAPFP+ VIH L  +++LLES++A   N D
Sbjct: 602 ASGYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDA-NQNQD 639

Query: 667 AQLKIERYLVQPCIEKVVTSSQCLNERLPPLKSMFLSSGFSPLTFSNFTESQAECLLQRT 723
               IER+ VQP IEK++       ER PP + +F   GFSP + S   E+QAECLLQR 
Sbjct: 662 -DSSIERFWVQPSIEKLLMKRHRWIERSPPWRILFTQCGFSPASLSQMAEAQAECLLQRN 639

[Close]

BLAST of CmoCh17G004540 vs. ExPASy Swiss-Prot
Match: Q9M000 (Scarecrow-like protein 22 OS=Arabidopsis thaliana OX=3702 GN=SCL22 PE=1 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.5e-109
Identity = 304/756 (40.21%), Postives = 394/756 (52.12%), Query Frame = 0


Query: 7   PYPFDDLRPNGVLNFSSVSDSSPPPFRRHNHRQHWSSTDNTN--LLKQICYV----GAAE 66
           P PF+  +  GVL F  +  SS P ++       W++ +  +  + + +C+V    G +E
Sbjct: 2   PLPFEQFQGKGVLGF--LDSSSSPGYK------IWANPEKLHGRVEEDLCFVVNNGGFSE 61

Query: 67  PTSVLDTRRSPSP--PTSTSTLSSSLGGGGGGGGTASTDTTVAAPQSSLPENPSPLDKCG 126
           PTSVLD+ RSPSP   +ST+TLSSS GG  GGG  A+T +                 KC 
Sbjct: 62  PTSVLDSVRSPSPFVSSSTTTLSSSHGGPSGGGAAAATFSGADG-------------KC- 121

Query: 127 GGGGLGMDDWESVLP-ESPGQGPSILGLIM-GDVEDPSLGLNKLLQSGGGGGGVGGGGGG 186
               +G +D + VL   SPGQ  SI  LIM GDV DP                       
Sbjct: 122 --DQMGFEDLDGVLSGGSPGQEQSIFRLIMAGDVVDP----------------------- 181

Query: 187 DSHLDLEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPSYARLSAAVSNSNAMFSGVFQ 246
                      F G D G   +P                        + N N +F   F 
Sbjct: 182 --------GSEFVGFDIGSGSDP-----------------------VIDNPNPLFGYGFP 241

Query: 247 NQNQLSETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQNHHHFLGGV 306
            QN   E   EK QI  +P             NP  F   P +                 
Sbjct: 242 FQNAPEE---EKFQISINP-------------NPGFFSDPPSS----------------- 301

Query: 307 PPTKRFNSG-PIPPNYPVKSPFLDSGQESINRRQQQQQQPQQVQLFPHQQQRPSMAALAK 366
           PP KR NSG P   +     PF D G ES +                          L  
Sbjct: 302 PPAKRLNSGQPGSQHLQWVFPFSDPGHESHD------------------------PFLTP 361

Query: 367 QKMVNEDIANQQLQQGISDQLFKAVELIET----GNSVLAQGILARLNHQLSSPIG---- 426
            K+  ED  +Q     I DQLF A   + T     N VLAQGILARLNH L++       
Sbjct: 362 PKIAGEDQNDQDQSAVIIDQLFSAAAELTTNGGDNNPVLAQGILARLNHNLNNNNDDTNN 421

Query: 427 ---KPFQRAAFYFKEALQSLLQNP--SNPSKPSPLSIIFKIAAYKSFSEVSPVLQFANFT 486
               PF RAA Y  EAL SLLQ+   S PS   P ++IF+IAAY++FSE SP LQF NFT
Sbjct: 422 NPKPPFHRAASYITEALHSLLQDSSLSPPSLSPPQNLIFRIAAYRAFSETSPFLQFVNFT 481

Query: 487 SNQALLEAFNGSGRIHIIDFDIGYGGQWASLMQELALR-----GPPFLKITAFASTST-H 546
           +NQ +LE+F G  RIHI+DFDIGYGGQWASL+QELA +       P LKITAFAS ST  
Sbjct: 482 ANQTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTVS 541

Query: 547 DDFELGFTQENLKNFANDLNIGFELEIINIE-SLNSGSWPLAL-NVSENEAIAVNLPVGS 606
           D+FEL FT+ENL++FA +  + FE+E++N+E  LN   WPL+L   SE EAIAVNLP+ S
Sbjct: 542 DEFELRFTEENLRSFAGETGVSFEIELLNMEILLNPTYWPLSLFRSSEKEAIAVNLPISS 601

Query: 607 L---SLPMILRFIKHLNPKIVVSVDRGCSR-VDAPFPHRVIHGLHSYSALLESMEAVTV- 666
           +    LP+ILRF+K ++P +VV  DR C R  DAPFP+ VI+ L  Y++LLES+++  + 
Sbjct: 602 MVSGYLPLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLESLDSGNLN 622

Query: 667 NMDAQLKIERYLVQPCIEKVVTSSQCLNERLPPLKSMFLSSGFSPLTFSNFTESQAECLL 723
           N +A   IER+ VQP I+K++T+     ER PP +S+F   GF+P+T S   E+QAE LL
Sbjct: 662 NAEAATSIERFCVQPSIQKLLTNRYRWMERSPPWRSLFGQCGFTPVTLSQTAETQAEYLL 622

[Close]

BLAST of CmoCh17G004540 vs. ExPASy Swiss-Prot
Match: O23210 (Scarecrow-like protein 15 OS=Arabidopsis thaliana OX=3702 GN=SCL15 PE=1 SV=3)

HSP 1 Score: 209.5 bits (532), Expect = 1.2e-52
Identity = 131/364 (35.99%), Postives = 207/364 (56.87%), Query Frame = 0


Query: 374 DQLFKAVELIETGNSVLAQGILARLNHQLSSPIGKPFQRAAFYFKEALQSLLQNPS-NPS 433
           + L + V+ +E+    LAQ +L+RLN +L SP G+P QRAAFYFKEAL S L   + NP 
Sbjct: 124 EDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGSNRNPI 183

Query: 434 KPSPLS-IIFKIAAYKSFSEVSPVLQFANFTSNQALLEAF---NGSGRIHIIDFDIGYGG 493
           + S  S I+ +I A K +S +SP+  F++FT+NQA+L++    + S  +H++DF+IG+GG
Sbjct: 184 RLSSWSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGG 243

Query: 494 QWASLMQELALRGPP--FLKITAFASTSTHDDFELGFTQENLKNFANDLNIGFELEIINI 553
           Q+ASLM+E+  +     FL++TA  +       E    +ENL  FA ++ I F++E + +
Sbjct: 244 QYASLMREITEKSVSGGFLRVTAVVAEEC--AVETRLVKENLTQFAAEMKIRFQIEFVLM 303

Query: 554 ESLNSGSWPLALNVSENEAIAVNLPVGSLSLPMILRFIKHL---NPKIVVSVD-RGCSRV 613
           ++    S+     V     + +  P     L  I  F+ +L   +PK+VV VD  G + +
Sbjct: 304 KTFEMLSFKAIRFVEGERTVVLISPAIFRRLSGITDFVNNLRRVSPKVVVFVDSEGWTEI 363

Query: 614 --DAPFPHRVIHGLHSYSALLESMEAVTVNMDAQLKI-ERYLVQPCIEKVV-TSSQCLNE 673
                F    +  L  Y+ +LES++A     D   KI E ++++P I   V T++   + 
Sbjct: 364 AGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVETAADRRHT 423

Query: 674 RLPPLKSMFLSSGFSPLTFSNFTESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSI 723
                +  F ++G  P+  S F + QAECLL++  V+GFH+ KR   LVLCWH + LV+ 
Sbjct: 424 GEMTWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLCWHGRALVAT 483

[Close]

BLAST of CmoCh17G004540 vs. ExPASy Swiss-Prot
Match: Q6EI06 (DELLA protein GAIP OS=Cucurbita maxima OX=3661 GN=GAIP PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 7.5e-34
Identity = 110/363 (30.30%), Postives = 173/363 (47.66%), Query Frame = 0


Query: 376 LFKAVELIETGNSVLAQGILARLNHQLSSPIGKPFQRAAFYFKEALQSLLQN--PSNPSK 435
           L    E ++  N  LA+ ++ R+++   S  G   ++ A +F EAL   +    P NP  
Sbjct: 215 LMVCAEAVQQNNLNLAEALVKRIDYLAVSQAG-AMRKVATFFAEALARRIYRLCPENPLD 274

Query: 436 PSPLSIIFKIAAYKSFSEVSPVLQFANFTSNQALLEAFNGSGRIHIIDFDIGYGGQWASL 495
            S L ++        F E  P L+FA+FT+NQA+LEAF G  R+H+IDF +  G QW +L
Sbjct: 275 RSVLDML-----QMHFYESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGIQWPAL 334

Query: 496 MQELALR--GPPFLKITAFASTSTHDDFELGFTQENLKNFANDLNIGFELEIINIESL-N 555
           +Q LALR  GPP  ++T     +  +   L      L  FA  L++ FE       SL +
Sbjct: 335 IQALALRPSGPPTFRLTGIGPPAPDNSDYLQDVGWKLVKFAETLHVEFEYRGFVANSLAD 394

Query: 556 SGSWPLALNVSENEAIAVN-------LPVGSLSLPMILRFIKHLNPKIVVSVDRGCSRVD 615
             +  L L  SE E++ VN       L     ++  +L  +K + P+IV  V++  +   
Sbjct: 395 LDASMLELRPSEVESVVVNSVFELHQLLARPGAIEKVLSVVKQMKPEIVTVVEQEANHNG 454

Query: 616 APFPHRVIHGLHSYSALLESMEAVTVNMDAQLKIERYLVQPCIEKVVTSSQCLNER---L 675
             F  R    LH YS L +S+E  + N   ++  E YL +     V        ER   L
Sbjct: 455 PVFVERFTESLHYYSTLFDSLEC-SPNSQDKMMSEMYLGKQICNVVACEGADRVERHETL 514

Query: 676 PPLKSMFLSSGFSPLTFSNFTESQAECLLQR-TPVQGFHIDKRHSSLVLCWHRKELVSIS 723
              ++   S+GF P+   +    QA  LL      +G+ +++   SL+L WH + L++ S
Sbjct: 515 TQWRTRLSSAGFDPIHLGSNAFKQASILLALFGSGEGYRVEENEGSLMLGWHTRPLIATS 570

[Close]

BLAST of CmoCh17G004540 vs. ExPASy TrEMBL
Match: A0A6J1H426 (scarecrow-like protein 27 OS=Cucurbita moschata OX=3662 GN=LOC111460231 PE=3 SV=1)

HSP 1 Score: 1427.5 bits (3694), Expect = 0.0e+00
Identity = 723/723 (100.00%), Postives = 723/723 (100.00%), Query Frame = 0


Query: 1   MKAMPFPYPFDDLRPNGVLNFSSVSDSSPPPFRRHNHRQHWSSTDNTNLLKQICYVGAAE 60
           MKAMPFPYPFDDLRPNGVLNFSSVSDSSPPPFRRHNHRQHWSSTDNTNLLKQICYVGAAE
Sbjct: 1   MKAMPFPYPFDDLRPNGVLNFSSVSDSSPPPFRRHNHRQHWSSTDNTNLLKQICYVGAAE 60

Query: 61  PTSVLDTRRSPSPPTSTSTLSSSLGGGGGGGGTASTDTTVAAPQSSLPENPSPLDKCGGG 120
           PTSVLDTRRSPSPPTSTSTLSSSLGGGGGGGGTASTDTTVAAPQSSLPENPSPLDKCGGG
Sbjct: 61  PTSVLDTRRSPSPPTSTSTLSSSLGGGGGGGGTASTDTTVAAPQSSLPENPSPLDKCGGG 120

Query: 121 GGLGMDDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGGVGGGGGGDSHL 180
           GGLGMDDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGGVGGGGGGDSHL
Sbjct: 121 GGLGMDDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGGVGGGGGGDSHL 180

Query: 181 DLEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPSYARLSAAVSNSNAMFSGVFQNQNQ 240
           DLEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPSYARLSAAVSNSNAMFSGVFQNQNQ
Sbjct: 181 DLEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPSYARLSAAVSNSNAMFSGVFQNQNQ 240

Query: 241 LSETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQNHHHFLGGVPPTK 300
           LSETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQNHHHFLGGVPPTK
Sbjct: 241 LSETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQNHHHFLGGVPPTK 300

Query: 301 RFNSGPIPPNYPVKSPFLDSGQESINRRQQQQQQPQQVQLFPHQQQRPSMAALAKQKMVN 360
           RFNSGPIPPNYPVKSPFLDSGQESINRRQQQQQQPQQVQLFPHQQQRPSMAALAKQKMVN
Sbjct: 301 RFNSGPIPPNYPVKSPFLDSGQESINRRQQQQQQPQQVQLFPHQQQRPSMAALAKQKMVN 360

Query: 361 EDIANQQLQQGISDQLFKAVELIETGNSVLAQGILARLNHQLSSPIGKPFQRAAFYFKEA 420
           EDIANQQLQQGISDQLFKAVELIETGNSVLAQGILARLNHQLSSPIGKPFQRAAFYFKEA
Sbjct: 361 EDIANQQLQQGISDQLFKAVELIETGNSVLAQGILARLNHQLSSPIGKPFQRAAFYFKEA 420

Query: 421 LQSLLQNPSNPSKPSPLSIIFKIAAYKSFSEVSPVLQFANFTSNQALLEAFNGSGRIHII 480
           LQSLLQNPSNPSKPSPLSIIFKIAAYKSFSEVSPVLQFANFTSNQALLEAFNGSGRIHII
Sbjct: 421 LQSLLQNPSNPSKPSPLSIIFKIAAYKSFSEVSPVLQFANFTSNQALLEAFNGSGRIHII 480

Query: 481 DFDIGYGGQWASLMQELALRGPPFLKITAFASTSTHDDFELGFTQENLKNFANDLNIGFE 540
           DFDIGYGGQWASLMQELALRGPPFLKITAFASTSTHDDFELGFTQENLKNFANDLNIGFE
Sbjct: 481 DFDIGYGGQWASLMQELALRGPPFLKITAFASTSTHDDFELGFTQENLKNFANDLNIGFE 540

Query: 541 LEIINIESLNSGSWPLALNVSENEAIAVNLPVGSLSLPMILRFIKHLNPKIVVSVDRGCS 600
           LEIINIESLNSGSWPLALNVSENEAIAVNLPVGSLSLPMILRFIKHLNPKIVVSVDRGCS
Sbjct: 541 LEIINIESLNSGSWPLALNVSENEAIAVNLPVGSLSLPMILRFIKHLNPKIVVSVDRGCS 600

Query: 601 RVDAPFPHRVIHGLHSYSALLESMEAVTVNMDAQLKIERYLVQPCIEKVVTSSQCLNERL 660
           RVDAPFPHRVIHGLHSYSALLESMEAVTVNMDAQLKIERYLVQPCIEKVVTSSQCLNERL
Sbjct: 601 RVDAPFPHRVIHGLHSYSALLESMEAVTVNMDAQLKIERYLVQPCIEKVVTSSQCLNERL 660

Query: 661 PPLKSMFLSSGFSPLTFSNFTESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSISA 720
           PPLKSMFLSSGFSPLTFSNFTESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSISA
Sbjct: 661 PPLKSMFLSSGFSPLTFSNFTESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSISA 720

Query: 721 WRS 724
           WRS
Sbjct: 721 WRS 723

[Close]

BLAST of CmoCh17G004540 vs. ExPASy TrEMBL
Match: A0A6J1KXZ8 (scarecrow-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111499225 PE=3 SV=1)

HSP 1 Score: 1365.1 bits (3532), Expect = 0.0e+00
Identity = 705/728 (96.84%), Postives = 707/728 (97.12%), Query Frame = 0


Query: 1   MKAMPFPYPFDDLRPNGVLNFSSVSDSSPPPFRRHNHRQHWSSTDNTNLLKQICYVGAAE 60
           MKAMPFPYPFDDLRPNGVLNFSSVSDSSPP  RRHNHRQHWSSTDNTNLLKQICYVGAAE
Sbjct: 1   MKAMPFPYPFDDLRPNGVLNFSSVSDSSPPTLRRHNHRQHWSSTDNTNLLKQICYVGAAE 60

Query: 61  PTSVLDTRRSPSPPTSTSTLSSSLGGGG---GGGGTASTDTTVAAPQSSLPENPSPLDKC 120
           PTSVLDTRRSPSPPTSTSTLSSSLGGGG   GGGGTASTDTTVAAPQSSLP NPSPLDKC
Sbjct: 61  PTSVLDTRRSPSPPTSTSTLSSSLGGGGGGSGGGGTASTDTTVAAPQSSLPGNPSPLDKC 120

Query: 121 --GGGGGLGMDDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGGVGGGGG 180
             GGGGGLGMDDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGG+ GGGG
Sbjct: 121 GGGGGGGLGMDDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGGI-GGGG 180

Query: 181 GDSHLDLEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPSYARLSAAVSNSNAMFSGVF 240
           GDSHLDLEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPSYARLSAAVSNSNAMFSGVF
Sbjct: 181 GDSHLDLEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPSYARLSAAVSNSNAMFSGVF 240

Query: 241 QNQNQLSETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQNHHHFLGG 300
           QNQNQLSETVDEKPQI NSPQVMMNQNQTQFTHNPPLFMPLPFASPGQD    HHHFLGG
Sbjct: 241 QNQNQLSETVDEKPQILNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQD----HHHFLGG 300

Query: 301 VPPTKRFNSGPIPPNYPVKSPFLDSGQESINRRQQQQQQPQQVQLFPHQQQRPSMAALAK 360
           VP TKRFNSGPIPPNYPVKSPFLDSGQE+INRRQQQQQQ QQVQLFPHQQQRPSMAALAK
Sbjct: 301 VPRTKRFNSGPIPPNYPVKSPFLDSGQENINRRQQQQQQTQQVQLFPHQQQRPSMAALAK 360

Query: 361 QKMVNEDIANQQLQQGISDQLFKAVELIETGNSVLAQGILARLNHQLSSPIGKPFQRAAF 420
           QKMVNEDI NQQLQQGISDQLFKAVELIETGNSVLAQGILARLNHQLSSPIGKPFQRAAF
Sbjct: 361 QKMVNEDIVNQQLQQGISDQLFKAVELIETGNSVLAQGILARLNHQLSSPIGKPFQRAAF 420

Query: 421 YFKEALQSLLQNPSNPSKPSPLSIIFKIAAYKSFSEVSPVLQFANFTSNQALLEAFNGSG 480
           YFKEALQSLLQNPSNPS PSPLSIIFKIAAYKSFSEVSPVLQFANFTSNQALLEAFNGSG
Sbjct: 421 YFKEALQSLLQNPSNPSNPSPLSIIFKIAAYKSFSEVSPVLQFANFTSNQALLEAFNGSG 480

Query: 481 RIHIIDFDIGYGGQWASLMQELALRGPPFLKITAFASTSTHDDFELGFTQENLKNFANDL 540
           RIHIIDFDIGYGGQWASLMQELALRGPPFLKITAFASTSTHDDFELGFTQENLKNFANDL
Sbjct: 481 RIHIIDFDIGYGGQWASLMQELALRGPPFLKITAFASTSTHDDFELGFTQENLKNFANDL 540

Query: 541 NIGFELEIINIESLNSGSWPLALNVSENEAIAVNLPVGSLSLPMILRFIKHLNPKIVVSV 600
           NIGFELEIINIESLNSGSWPLALNVSENEAIAVNLPVGSLSLPMILRFIKHLNPKIVVSV
Sbjct: 541 NIGFELEIINIESLNSGSWPLALNVSENEAIAVNLPVGSLSLPMILRFIKHLNPKIVVSV 600

Query: 601 DRGCSRVDAPFPHRVIHGLHSYSALLESMEAVTVNMDAQLKIERYLVQPCIEKVVTSSQC 660
           DRGCSRVDAPFPHRVIHGLHSYSALLESMEAVTVNMDAQLKIERYLVQPCIEKVVTSSQC
Sbjct: 601 DRGCSRVDAPFPHRVIHGLHSYSALLESMEAVTVNMDAQLKIERYLVQPCIEKVVTSSQC 660

Query: 661 LNERLPPLKSMFLSSGFSPLTFSNFTESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKEL 720
            NERL PLKSMFLSSGFSPLTFSNFTESQAECLLQRTPVQGFHIDK HSSLVLCWHRKEL
Sbjct: 661 SNERLLPLKSMFLSSGFSPLTFSNFTESQAECLLQRTPVQGFHIDKSHSSLVLCWHRKEL 720

Query: 721 VSISAWRS 724
           VSISAWRS
Sbjct: 721 VSISAWRS 723

[Close]

BLAST of CmoCh17G004540 vs. ExPASy TrEMBL
Match: A0A0A0KAR4 (GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109640 PE=3 SV=1)

HSP 1 Score: 1218.8 bits (3152), Expect = 0.0e+00
Identity = 648/761 (85.15%), Postives = 674/761 (88.57%), Query Frame = 0


Query: 1   MKAMPFPYPFDDLRPNGVLNFSSVSDSSPPP-------FRRHNHRQHWSSTDNTNLLKQI 60
           MKAMP P+PFD+LRPNGVLNF+SVSDSSPP         RRHN   HWS TDNTNLLK+I
Sbjct: 1   MKAMPLPFPFDELRPNGVLNFTSVSDSSPPQPPTSTTLLRRHN---HWSCTDNTNLLKEI 60

Query: 61  CYVGAAEPTSVLDTRRSPSPPTSTSTLSSSLGG-GGGGGGTASTDTTVAAPQSSLPENPS 120
           CYVGAAEPTSVLDTRRSPSPPTSTSTLSSSLGG GGGGGGTASTDTTVAAP SSLPENPS
Sbjct: 61  CYVGAAEPTSVLDTRRSPSPPTSTSTLSSSLGGCGGGGGGTASTDTTVAAPPSSLPENPS 120

Query: 121 PLDKCGGGGGLGMDDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGGVGG 180
           PLDKCGGGG LG+DDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGG    GG
Sbjct: 121 PLDKCGGGGSLGIDDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGG----GG 180

Query: 181 GGGGDSHLDLEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPS-----YARLSAAVSNS 240
           GGGG SHLDLEFS  F+ VDHGLVFEPN+L+GESIVDPSLQ PS      ARL+AAVSNS
Sbjct: 181 GGGGGSHLDLEFSAGFTAVDHGLVFEPNSLSGESIVDPSLQGPSCSDFHNARLAAAVSNS 240

Query: 241 NAMFSGVFQNQNQLSETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQ 300
           NAMFSGVFQNQNQ+ E VDEKPQIF+S QV+MNQNQ QFT NP LFMPLP+ASP Q+HHQ
Sbjct: 241 NAMFSGVFQNQNQMVEGVDEKPQIFSSSQVVMNQNQAQFTQNPALFMPLPYASPVQEHHQ 300

Query: 301 N-HHHFLGGVPPTKRFNSGPIPPNYPVKSPFLDSGQESINRRQQQQQQPQQVQLFPH--- 360
           N HHH LGG PP KRFNSG I PNYPVKSPFLDSGQE+ +RRQQQQQQP QVQLFPH   
Sbjct: 301 NHHHHLLGGAPPAKRFNSGSIGPNYPVKSPFLDSGQENFSRRQQQQQQPHQVQLFPHHSH 360

Query: 361 ------QQQRPSMAALAKQKMVNEDIANQQLQQGISDQLFKAVELIETGNSVLAQGILAR 420
                 QQQRPSMAALAKQKMVNEDIANQQLQQGISDQLFKAVELIETGNSVLAQGILAR
Sbjct: 361 HHNVPQQQQRPSMAALAKQKMVNEDIANQQLQQGISDQLFKAVELIETGNSVLAQGILAR 420

Query: 421 LNHQLSSPIGKPFQRAAFYFKEALQSLLQNPSN-PS---KPSPLSIIFKIAAYKSFSEVS 480
           LNHQLSSPIGKPFQRAAFYFKEALQ LLQNPSN PS    PSP +IIFKIAAYKSFSEVS
Sbjct: 421 LNHQLSSPIGKPFQRAAFYFKEALQLLLQNPSNHPSSNPNPSPFTIIFKIAAYKSFSEVS 480

Query: 481 PVLQFANFTSNQALLEAFNGSGRIHIIDFDIGYGGQWASLMQELALR------GPPFLKI 540
           PVLQFANFTSNQALLEAFNG  RIHIIDFDIGYGGQWASLMQELALR      GPPFL+I
Sbjct: 481 PVLQFANFTSNQALLEAFNGFDRIHIIDFDIGYGGQWASLMQELALRSSTTGGGPPFLRI 540

Query: 541 TAFASTSTHDDFELGFTQENLKNFANDLNIGFELEIINIESLNSGSWPLALNVSENEAIA 600
           TAFASTSTHDDFELGFTQENLKNFANDLNIGFELE++N+E LNSGSWPL LNVSENEAIA
Sbjct: 541 TAFASTSTHDDFELGFTQENLKNFANDLNIGFELEVVNVECLNSGSWPLPLNVSENEAIA 600

Query: 601 VNLPVG-----SLSLPMILRFIKHLNPKIVVSVDRGCSRVDAPFPHRVIHGLHSYSALLE 660
           VNLPVG     SLSLPMILRF+KHLNPKIVVSVDRGCSR+DAPFPHRVI+ LHSYSALLE
Sbjct: 601 VNLPVGSFFNYSLSLPMILRFVKHLNPKIVVSVDRGCSRMDAPFPHRVINALHSYSALLE 660

Query: 661 SMEAVTVNMDAQLKIERYLVQPCIEKVVTSSQCLNERLPPLKSMFLSSGFSPLTFSNFTE 720
           SMEAVTVNMD QLKIERYLVQPCIEKVVT+ Q  NER  P KS+FLSSGF PLTFSNFTE
Sbjct: 661 SMEAVTVNMDTQLKIERYLVQPCIEKVVTNPQSSNERAAPWKSVFLSSGFCPLTFSNFTE 720

Query: 721 SQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSISAWRS 724
           SQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSISAWRS
Sbjct: 721 SQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSISAWRS 754

[Close]

BLAST of CmoCh17G004540 vs. ExPASy TrEMBL
Match: A0A5D3CSI2 (Scarecrow-like protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00010 PE=3 SV=1)

HSP 1 Score: 1207.2 bits (3122), Expect = 0.0e+00
Identity = 647/762 (84.91%), Postives = 673/762 (88.32%), Query Frame = 0


Query: 1   MKAMPFPYPFDDLRPNGVLNFSSVSDSSP--PP-----FRRHNHRQHWSSTDNTNLLKQI 60
           MKAMP P+PFD+LRPNGVLNF+SVSDSSP  PP      RRHN   HWS TDNTNLLK+I
Sbjct: 1   MKAMPLPFPFDELRPNGVLNFTSVSDSSPSQPPTSTTLLRRHN---HWSCTDNTNLLKEI 60

Query: 61  CYVGAAEPTSVLDTRRSPSPPTSTSTLSSSL-GGGGGGGGTASTDTTVAAPQSSLPENPS 120
           CYVGAAEPTSVLDTRRSPSPPTSTSTLSSSL GGGGGGGGTASTDTTVAAP SSLPENPS
Sbjct: 61  CYVGAAEPTSVLDTRRSPSPPTSTSTLSSSLGGGGGGGGGTASTDTTVAAPPSSLPENPS 120

Query: 121 PLDKCGGGGGLGMDDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGGVGG 180
           PLDKCGGGG LG+DDWESVLPESP QGPSILGLIMGDVEDPSLGLNKLLQSGGG    GG
Sbjct: 121 PLDKCGGGGSLGIDDWESVLPESPSQGPSILGLIMGDVEDPSLGLNKLLQSGGG----GG 180

Query: 181 GGGGDSHLDLEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPS-----YARLSAAVSNS 240
            GGGDSHLDLEFS  FS VDHGLVFEPN+LAGESIVDPSLQ  S      ARL+AAVSNS
Sbjct: 181 SGGGDSHLDLEFSAGFSAVDHGLVFEPNSLAGESIVDPSLQGSSCSDFPNARLAAAVSNS 240

Query: 241 NAMFSGVFQNQNQLSETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQ 300
           NA+FSG+FQNQNQ+ E VDEKPQIF+S QV+MNQNQTQFT NP LFMPLP+ASP QDHHQ
Sbjct: 241 NAIFSGMFQNQNQMVEGVDEKPQIFSSSQVVMNQNQTQFTQNPALFMPLPYASPVQDHHQ 300

Query: 301 N--HHHFLGGVPPTKRFNSGPIPPNYPVKSPFLDSGQESINRRQQQQQQPQQVQLFPH-- 360
           N  HHH LGG PP KRFNSG I PNYPVKSPFLDSGQE+ +RR QQQQQP QVQLFPH  
Sbjct: 301 NHHHHHLLGGAPPAKRFNSGSIGPNYPVKSPFLDSGQENFSRR-QQQQQPHQVQLFPHHS 360

Query: 361 -------QQQRPSMAALAKQKMVNEDIANQQLQQGISDQLFKAVELIETGNSVLAQGILA 420
                  QQQRPSMAALAKQKMVNEDIANQQLQQGISDQLFKAVELIETGNSVLAQGILA
Sbjct: 361 HHHNVPQQQQRPSMAALAKQKMVNEDIANQQLQQGISDQLFKAVELIETGNSVLAQGILA 420

Query: 421 RLNHQLSSPIGKPFQRAAFYFKEALQSLLQNPSN-PS---KPSPLSIIFKIAAYKSFSEV 480
           RLNHQLSSPIGKPFQRAAFYFKEALQ LLQNPSN PS    PSP +IIFKIAAYKSFSEV
Sbjct: 421 RLNHQLSSPIGKPFQRAAFYFKEALQLLLQNPSNHPSSNPNPSPFTIIFKIAAYKSFSEV 480

Query: 481 SPVLQFANFTSNQALLEAFNGSGRIHIIDFDIGYGGQWASLMQELALR------GPPFLK 540
           SPVLQFANFTSNQALLEAFNG  RIHIIDFDIGYGGQWASLMQELALR      GPPFL+
Sbjct: 481 SPVLQFANFTSNQALLEAFNGFDRIHIIDFDIGYGGQWASLMQELALRSNTTGGGPPFLR 540

Query: 541 ITAFASTSTHDDFELGFTQENLKNFANDLNIGFELEIINIESLNSGSWPLALNVSENEAI 600
           ITAFASTSTHD+FELGFTQENLKNFANDLNIGFELE++N+E LNSGSWPL LNVSENEAI
Sbjct: 541 ITAFASTSTHDNFELGFTQENLKNFANDLNIGFELEVVNVECLNSGSWPLPLNVSENEAI 600

Query: 601 AVNLPVG-----SLSLPMILRFIKHLNPKIVVSVDRGCSRVDAPFPHRVIHGLHSYSALL 660
           AVNLPVG     SLSLPMILRF+KHLNPKIVVSVDRGCSR+DAPFPHRVI+ LHSYSALL
Sbjct: 601 AVNLPVGSFFNYSLSLPMILRFVKHLNPKIVVSVDRGCSRMDAPFPHRVINALHSYSALL 660

Query: 661 ESMEAVTVNMDAQLKIERYLVQPCIEKVVTSSQCLNERLPPLKSMFLSSGFSPLTFSNFT 720
           ESMEAVTVNMD QLKIERYLVQPCIEKVVT+ Q  NER  P KS+FLSSGF PLTFSNFT
Sbjct: 661 ESMEAVTVNMDTQLKIERYLVQPCIEKVVTNPQSSNERAAPWKSVFLSSGFCPLTFSNFT 720

Query: 721 ESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSISAWRS 724
           ESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSISAWRS
Sbjct: 721 ESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSISAWRS 754

[Close]

BLAST of CmoCh17G004540 vs. ExPASy TrEMBL
Match: A0A1S3C7R0 (LOW QUALITY PROTEIN: scarecrow-like protein 6 OS=Cucumis melo OX=3656 GN=LOC103497658 PE=3 SV=1)

HSP 1 Score: 1199.9 bits (3103), Expect = 0.0e+00
Identity = 644/762 (84.51%), Postives = 670/762 (87.93%), Query Frame = 0


Query: 1   MKAMPFPYPFDDLRPNGVLNFSSVSDSSP--PP-----FRRHNHRQHWSSTDNTNLLKQI 60
           MKAMP P+PFD+LRPNGVLNF+SVSDSSP  PP      RRHN   HWS TDNTNLLK+I
Sbjct: 1   MKAMPLPFPFDELRPNGVLNFTSVSDSSPSQPPTSTTLLRRHN---HWSCTDNTNLLKEI 60

Query: 61  CYVGAAEPTSVLDTRRSPSPPTSTSTLSSSL-GGGGGGGGTASTDTTVAAPQSSLPENPS 120
           CYVGAAEPTSVLDTRRSPSPPTSTSTLSSSL GGGGGGGGTASTDTTVAAP SSLPENPS
Sbjct: 61  CYVGAAEPTSVLDTRRSPSPPTSTSTLSSSLGGGGGGGGGTASTDTTVAAPPSSLPENPS 120

Query: 121 PLDKCGGGGGLGMDDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGGVGG 180
           PLDKCGGGG LG+DDWESV   SP QGPSILGLIMGDVEDPSLGLNKLLQSGGG    GG
Sbjct: 121 PLDKCGGGGSLGIDDWESVFAGSPSQGPSILGLIMGDVEDPSLGLNKLLQSGGG----GG 180

Query: 181 GGGGDSHLDLEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPS-----YARLSAAVSNS 240
            GGGDSHLDLEFS  FS VDHGLVFEPN+LAGESIVDPSLQ  S      ARL+AAVSNS
Sbjct: 181 SGGGDSHLDLEFSAGFSAVDHGLVFEPNSLAGESIVDPSLQGSSCSDFPNARLAAAVSNS 240

Query: 241 NAMFSGVFQNQNQLSETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQ 300
           NA+FSG+FQNQNQ+ E VDEKPQIF+S QV+MNQNQTQFT NP LFMPLP+ASP QDHHQ
Sbjct: 241 NAIFSGMFQNQNQMVEGVDEKPQIFSSSQVVMNQNQTQFTQNPALFMPLPYASPVQDHHQ 300

Query: 301 N--HHHFLGGVPPTKRFNSGPIPPNYPVKSPFLDSGQESINRRQQQQQQPQQVQLFPH-- 360
           N  HHH LGG PP KRFNSG I PNYPVKSPFLDSGQE+ +RR QQQQQP QVQLFPH  
Sbjct: 301 NHHHHHLLGGAPPAKRFNSGSIGPNYPVKSPFLDSGQENFSRR-QQQQQPHQVQLFPHHS 360

Query: 361 -------QQQRPSMAALAKQKMVNEDIANQQLQQGISDQLFKAVELIETGNSVLAQGILA 420
                  QQQRPSMAALAKQKMVNEDIANQQLQQGISDQLFKAVELIETGNSVLAQGILA
Sbjct: 361 HHHNVPQQQQRPSMAALAKQKMVNEDIANQQLQQGISDQLFKAVELIETGNSVLAQGILA 420

Query: 421 RLNHQLSSPIGKPFQRAAFYFKEALQSLLQNPSN-PS---KPSPLSIIFKIAAYKSFSEV 480
           RLNHQLSSPIGKPFQRAAFYFKEALQ LLQNPSN PS    PSP +IIFKIAAYKSFSEV
Sbjct: 421 RLNHQLSSPIGKPFQRAAFYFKEALQLLLQNPSNHPSSNPNPSPFTIIFKIAAYKSFSEV 480

Query: 481 SPVLQFANFTSNQALLEAFNGSGRIHIIDFDIGYGGQWASLMQELALR------GPPFLK 540
           SPVLQFANFTSNQALLEAFNG  RIHIIDFDIGYGGQWASLMQELALR      GPPFL+
Sbjct: 481 SPVLQFANFTSNQALLEAFNGFDRIHIIDFDIGYGGQWASLMQELALRSNTTGGGPPFLR 540

Query: 541 ITAFASTSTHDDFELGFTQENLKNFANDLNIGFELEIINIESLNSGSWPLALNVSENEAI 600
           ITAFASTSTHD+FELGFTQENLKNFANDLNIGFELE++N+E LNSGSWPL LNVSENEAI
Sbjct: 541 ITAFASTSTHDNFELGFTQENLKNFANDLNIGFELEVVNVECLNSGSWPLPLNVSENEAI 600

Query: 601 AVNLPVG-----SLSLPMILRFIKHLNPKIVVSVDRGCSRVDAPFPHRVIHGLHSYSALL 660
           AVNLPVG     SLSLPMILRF+KHLNPKIVVSVDRGCSR+DAPFPHRVI+ LHSYSALL
Sbjct: 601 AVNLPVGSFFNYSLSLPMILRFVKHLNPKIVVSVDRGCSRMDAPFPHRVINALHSYSALL 660

Query: 661 ESMEAVTVNMDAQLKIERYLVQPCIEKVVTSSQCLNERLPPLKSMFLSSGFSPLTFSNFT 720
           ESMEAVTVNMD QLKIERYLVQPCIEKVVT+ Q  NER  P KS+FLSSGF PLTFSNFT
Sbjct: 661 ESMEAVTVNMDTQLKIERYLVQPCIEKVVTNPQSSNERAAPWKSVFLSSGFCPLTFSNFT 720

Query: 721 ESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSISAWRS 724
           ESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSISAWRS
Sbjct: 721 ESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSISAWRS 754

[Close]

BLAST of CmoCh17G004540 vs. TAIR 10
Match: AT4G00150.1 (GRAS family transcription factor )

HSP 1 Score: 476.5 bits (1225), Expect = 3.9e-134
Identity = 313/725 (43.17%), Postives = 404/725 (55.72%), Query Frame = 0


Query: 7   PYPFDDLRPNGVLNFSSVSDS--SPPPFRRHNHRQHWSSTDNTNLLKQICYVGAAEPTSV 66
           P PF++ +  G+  FSS S S   PP     +HR+     +          V AAEPTSV
Sbjct: 2   PLPFEEFQGKGISCFSSFSSSFPQPPSSPLLSHRKARGGEEEEE------EVPAAEPTSV 61

Query: 67  LDTRRSPSPPTSTSTLSSSLGGGG--GGGGTASTDTTVAAPQSSLPENPSPLDKCGGGGG 126
           LD+  S   PTS+ST+SSS GG    GGGG A+TD                 ++C   G 
Sbjct: 62  LDSLIS---PTSSSTVSSSHGGNSAVGGGGDATTD-----------------EQC---GA 121

Query: 127 LGMDDWESVLPESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGGVGGGGGGDSHLDL 186
           +G+ DWE  +P    Q  SILGLIMGD  DPSL LN +LQ+            G   +D 
Sbjct: 122 IGLGDWEEQVPHDHEQ--SILGLIMGDSTDPSLELNSILQTSPTFHDSDYSSPGFGVVDT 181

Query: 187 EFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPSYARLSAAVSNSNAMFSGVFQNQNQLS 246
            F     G+DH  V  P+ ++G                                      
Sbjct: 182 GF-----GLDHHSV-PPSHVSG-------------------------------------- 241

Query: 247 ETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQNHHHFLGGVPPTKRF 306
                         +++NQ+QT +T NP               + +HHH     PP KR 
Sbjct: 242 --------------LLINQSQTHYTQNPAAIF-----------YGHHHH---TPPPAKRL 301

Query: 307 NSGPIPPNYPVKSPFLDSGQESINRRQQQQQQPQQVQLFPHQQQRPSMAALAKQKMVNED 366
           N GP+                                                       
Sbjct: 302 NPGPV------------------------------------------------------- 361

Query: 367 IANQQLQQGISDQLFKAVELIETGNSVLAQGILARLNHQLSSPIGKPFQRAAFYFKEALQ 426
                   GI++QL KA E+IE+ ++ LAQGILARLN QLSSP+GKP +RAAFYFKEAL 
Sbjct: 362 --------GITEQLVKAAEVIES-DTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALN 421

Query: 427 SLLQNPSNPSKPSPLSIIFKIAAYKSFSEVSPVLQFANFTSNQALLEAFNGSGRIHIIDF 486
           +LL N S     +P S+IFKIAAYKSFSE+SPVLQFANFTSNQALLE+F+G  R+HIIDF
Sbjct: 422 NLLHNVSQTL--NPYSLIFKIAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDF 481

Query: 487 DIGYGGQWASLMQELALR---GPPFLKITAFASTSTHDDFELGFTQENLKNFANDLNIGF 546
           DIGYGGQWASLMQEL LR    P  LKIT FAS + HD  ELGFTQ+NLK+FA+++NI  
Sbjct: 482 DIGYGGQWASLMQELVLRDNAAPLSLKITVFASPANHDQLELGFTQDNLKHFASEINISL 541

Query: 547 ELEIINIESLNSGSWPLALNVSENEAIAVNLPVGSLS-LPMILRFIKHLNPKIVVSVDRG 606
           ++++++++ L S SWP   N SE EA+AVN+   S S LP++LRF+KHL+P I+V  DRG
Sbjct: 542 DIQVLSLDLLGSISWP---NSSEKEAVAVNISAASFSHLPLVLRFVKHLSPTIIVCSDRG 554

Query: 607 CSRVDAPFPHRVIHGLHSYSALLESMEAVTVNMDAQLKIERYLVQPCIEKVVTS-SQCLN 666
           C R D PF  ++ H LHS++AL ES++AV  N+DA  KIER+L+QP IEK+V   S+ + 
Sbjct: 602 CERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKIERFLIQPEIEKLVLDRSRPIE 554

Query: 667 ERLPPLKSMFLSSGFSPLTFSNFTESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVS 723
             +   ++MFL  GFSP+T SNFTESQAECL+QRTPV+GFH++K+H+SL+LCW R ELV 
Sbjct: 662 RPMMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTELVG 554

[Close]

BLAST of CmoCh17G004540 vs. TAIR 10
Match: AT2G45160.1 (GRAS family transcription factor )

HSP 1 Score: 408.3 bits (1048), Expect = 1.3e-113
Identity = 319/750 (42.53%), Postives = 411/750 (54.80%), Query Frame = 0


Query: 7   PYPFDDLRPNGVLNFSSVSDSSPPPFRRHNHRQHWSSTDNTNLLKQ-ICYVGAA---EPT 66
           P  F+  +  GV   SS S  S       + ++ WS+ D T   ++ + YV      EPT
Sbjct: 2   PLSFERFQGEGVFGLSSSSFYS-------DSQKIWSNQDKTEAKQEDLGYVVGGFLPEPT 61

Query: 67  SVLDTRRSPSPPTSTSTLSSSLGGGGGGGGTASTDTTVAAPQSSLPENPSPLDKCGGGGG 126
           SVLD  RSPSP  S S+ +++L    GGGGT  T+TTV A       + +  +KC     
Sbjct: 62  SVLDALRSPSPLASYSSTTTTLSSSHGGGGTTVTNTTVTA------GDDNNNNKC---SQ 121

Query: 127 LGMDDWESVL-PESPGQGPSILGLIMGDVEDPSLGLNKLLQSGGGGGGVGGGGGGDSHLD 186
           +G+DD + VL   SPGQ  SIL LIM    DP           G   GV   G G     
Sbjct: 122 MGLDDLDGVLSASSPGQEQSILRLIM----DP-----------GSAFGVFDPGFG----- 181

Query: 187 LEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPSYARLSAAVS-NSNAMFSGVFQNQNQ 246
               GS SG                             +SA VS NSN + +  FQ    
Sbjct: 182 ---FGSGSG----------------------------PVSAPVSDNSNLLCNFPFQ---- 241

Query: 247 LSETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQNHHHFLGGVPPTK 306
                    +I N  + ++N +     +NPPL                        PP K
Sbjct: 242 ---------EITNPAEALINPSNHCLFYNPPL-----------------------SPPAK 301

Query: 307 RFNSGPI-PPNYPVKSPFLDSGQESINRRQQQQQQP----QQVQLFPHQQQRPSMAALAK 366
           RFNSG +  P +P+  P  D G + + RRQ Q Q P     Q Q FP      S  A+A 
Sbjct: 302 RFNSGSLHQPVFPLSDP--DPGHDPV-RRQHQFQFPFYHNNQQQQFPSSS---SSTAVAM 361

Query: 367 QKMVNEDIANQQLQQGISDQLFKAVELI-ETGN-----SVLAQGILARLNHQL--SSPIG 426
             + +  +A    Q  I +QLF A ELI  TGN     +VLAQGILARLNH L  SS   
Sbjct: 362 VPVPSPGMAGDD-QSVIIEQLFNAAELIGTTGNNNGDHTVLAQGILARLNHHLNTSSNHK 421

Query: 427 KPFQRAAFYFKEALQSLLQNPSNPSKPSPLSIIFKIAAYKSFSEVSPVLQFANFTSNQAL 486
            PFQRAA +  EAL SL+ N S+P   +P ++I +IAAY+SFSE SP LQF NFT+NQ++
Sbjct: 422 SPFQRAASHIAEALLSLIHNESSPPLITPENLILRIAAYRSFSETSPFLQFVNFTANQSI 481

Query: 487 LEAFNGSG--RIHIIDFDIGYGGQWASLMQELA-------LRGPPFLKITAFA--STSTH 546
           LE+ N SG  RIHIIDFD+GYGGQW+SLMQELA             LK+T FA   ++  
Sbjct: 482 LESCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKLTVFAPPPSTVS 541

Query: 547 DDFELGFTQENLKNFANDLNIGFELEIINIE-SLNSGSWPLALNVSENEAIAVNLPVGSL 606
           D+FEL FT+ENLK FA ++ I FE+E++++E  LN   WPL+L  SE EAIAVNLPV S+
Sbjct: 542 DEFELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEAIAVNLPVNSV 601

Query: 607 S---LPMILRFIKHLNPKIVVSVDRGCSRVDAPFPHRVIHGLHSYSALLESMEAVTVNMD 666
           +   LP+ILRF+K L+P IVV  DRGC R DAPFP+ VIH L  +++LLES++A   N D
Sbjct: 602 ASGYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDA-NQNQD 639

Query: 667 AQLKIERYLVQPCIEKVVTSSQCLNERLPPLKSMFLSSGFSPLTFSNFTESQAECLLQRT 723
               IER+ VQP IEK++       ER PP + +F   GFSP + S   E+QAECLLQR 
Sbjct: 662 -DSSIERFWVQPSIEKLLMKRHRWIERSPPWRILFTQCGFSPASLSQMAEAQAECLLQRN 639

[Close]

BLAST of CmoCh17G004540 vs. TAIR 10
Match: AT3G60630.1 (GRAS family transcription factor )

HSP 1 Score: 397.9 bits (1021), Expect = 1.7e-110
Identity = 304/756 (40.21%), Postives = 394/756 (52.12%), Query Frame = 0


Query: 7   PYPFDDLRPNGVLNFSSVSDSSPPPFRRHNHRQHWSSTDNTN--LLKQICYV----GAAE 66
           P PF+  +  GVL F  +  SS P ++       W++ +  +  + + +C+V    G +E
Sbjct: 2   PLPFEQFQGKGVLGF--LDSSSSPGYK------IWANPEKLHGRVEEDLCFVVNNGGFSE 61

Query: 67  PTSVLDTRRSPSP--PTSTSTLSSSLGGGGGGGGTASTDTTVAAPQSSLPENPSPLDKCG 126
           PTSVLD+ RSPSP   +ST+TLSSS GG  GGG  A+T +                 KC 
Sbjct: 62  PTSVLDSVRSPSPFVSSSTTTLSSSHGGPSGGGAAAATFSGADG-------------KC- 121

Query: 127 GGGGLGMDDWESVLP-ESPGQGPSILGLIM-GDVEDPSLGLNKLLQSGGGGGGVGGGGGG 186
               +G +D + VL   SPGQ  SI  LIM GDV DP                       
Sbjct: 122 --DQMGFEDLDGVLSGGSPGQEQSIFRLIMAGDVVDP----------------------- 181

Query: 187 DSHLDLEFSGSFSGVDHGLVFEPNTLAGESIVDPSLQAPSYARLSAAVSNSNAMFSGVFQ 246
                      F G D G   +P                        + N N +F   F 
Sbjct: 182 --------GSEFVGFDIGSGSDP-----------------------VIDNPNPLFGYGFP 241

Query: 247 NQNQLSETVDEKPQIFNSPQVMMNQNQTQFTHNPPLFMPLPFASPGQDHHQNHHHFLGGV 306
            QN   E   EK QI  +P             NP  F   P +                 
Sbjct: 242 FQNAPEE---EKFQISINP-------------NPGFFSDPPSS----------------- 301

Query: 307 PPTKRFNSG-PIPPNYPVKSPFLDSGQESINRRQQQQQQPQQVQLFPHQQQRPSMAALAK 366
           PP KR NSG P   +     PF D G ES +                          L  
Sbjct: 302 PPAKRLNSGQPGSQHLQWVFPFSDPGHESHD------------------------PFLTP 361

Query: 367 QKMVNEDIANQQLQQGISDQLFKAVELIET----GNSVLAQGILARLNHQLSSPIG---- 426
            K+  ED  +Q     I DQLF A   + T     N VLAQGILARLNH L++       
Sbjct: 362 PKIAGEDQNDQDQSAVIIDQLFSAAAELTTNGGDNNPVLAQGILARLNHNLNNNNDDTNN 421

Query: 427 ---KPFQRAAFYFKEALQSLLQNP--SNPSKPSPLSIIFKIAAYKSFSEVSPVLQFANFT 486
               PF RAA Y  EAL SLLQ+   S PS   P ++IF+IAAY++FSE SP LQF NFT
Sbjct: 422 NPKPPFHRAASYITEALHSLLQDSSLSPPSLSPPQNLIFRIAAYRAFSETSPFLQFVNFT 481

Query: 487 SNQALLEAFNGSGRIHIIDFDIGYGGQWASLMQELALR-----GPPFLKITAFASTST-H 546
           +NQ +LE+F G  RIHI+DFDIGYGGQWASL+QELA +       P LKITAFAS ST  
Sbjct: 482 ANQTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTVS 541

Query: 547 DDFELGFTQENLKNFANDLNIGFELEIINIE-SLNSGSWPLAL-NVSENEAIAVNLPVGS 606
           D+FEL FT+ENL++FA +  + FE+E++N+E  LN   WPL+L   SE EAIAVNLP+ S
Sbjct: 542 DEFELRFTEENLRSFAGETGVSFEIELLNMEILLNPTYWPLSLFRSSEKEAIAVNLPISS 601

Query: 607 L---SLPMILRFIKHLNPKIVVSVDRGCSR-VDAPFPHRVIHGLHSYSALLESMEAVTV- 666
           +    LP+ILRF+K ++P +VV  DR C R  DAPFP+ VI+ L  Y++LLES+++  + 
Sbjct: 602 MVSGYLPLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLESLDSGNLN 622

Query: 667 NMDAQLKIERYLVQPCIEKVVTSSQCLNERLPPLKSMFLSSGFSPLTFSNFTESQAECLL 723
           N +A   IER+ VQP I+K++T+     ER PP +S+F   GF+P+T S   E+QAE LL
Sbjct: 662 NAEAATSIERFCVQPSIQKLLTNRYRWMERSPPWRSLFGQCGFTPVTLSQTAETQAEYLL 622

[Close]

BLAST of CmoCh17G004540 vs. TAIR 10
Match: AT4G36710.1 (GRAS family transcription factor )

HSP 1 Score: 209.5 bits (532), Expect = 8.8e-54
Identity = 131/364 (35.99%), Postives = 207/364 (56.87%), Query Frame = 0


Query: 374 DQLFKAVELIETGNSVLAQGILARLNHQLSSPIGKPFQRAAFYFKEALQSLLQNPS-NPS 433
           + L + V+ +E+    LAQ +L+RLN +L SP G+P QRAAFYFKEAL S L   + NP 
Sbjct: 124 EDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGSNRNPI 183

Query: 434 KPSPLS-IIFKIAAYKSFSEVSPVLQFANFTSNQALLEAF---NGSGRIHIIDFDIGYGG 493
           + S  S I+ +I A K +S +SP+  F++FT+NQA+L++    + S  +H++DF+IG+GG
Sbjct: 184 RLSSWSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGG 243

Query: 494 QWASLMQELALRGPP--FLKITAFASTSTHDDFELGFTQENLKNFANDLNIGFELEIINI 553
           Q+ASLM+E+  +     FL++TA  +       E    +ENL  FA ++ I F++E + +
Sbjct: 244 QYASLMREITEKSVSGGFLRVTAVVAEEC--AVETRLVKENLTQFAAEMKIRFQIEFVLM 303

Query: 554 ESLNSGSWPLALNVSENEAIAVNLPVGSLSLPMILRFIKHL---NPKIVVSVD-RGCSRV 613
           ++    S+     V     + +  P     L  I  F+ +L   +PK+VV VD  G + +
Sbjct: 304 KTFEMLSFKAIRFVEGERTVVLISPAIFRRLSGITDFVNNLRRVSPKVVVFVDSEGWTEI 363

Query: 614 --DAPFPHRVIHGLHSYSALLESMEAVTVNMDAQLKI-ERYLVQPCIEKVV-TSSQCLNE 673
                F    +  L  Y+ +LES++A     D   KI E ++++P I   V T++   + 
Sbjct: 364 AGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVETAADRRHT 423

Query: 674 RLPPLKSMFLSSGFSPLTFSNFTESQAECLLQRTPVQGFHIDKRHSSLVLCWHRKELVSI 723
                +  F ++G  P+  S F + QAECLL++  V+GFH+ KR   LVLCWH + LV+ 
Sbjct: 424 GEMTWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLCWHGRALVAT 483

[Close]

BLAST of CmoCh17G004540 vs. TAIR 10
Match: AT1G14920.1 (GRAS family transcription factor family protein )

HSP 1 Score: 134.8 bits (338), Expect = 2.8e-31
Identity = 107/361 (29.64%), Postives = 170/361 (47.09%), Query Frame = 0


Query: 376 LFKAVELIETGNSVLAQGILARLNHQLSSPIGKPFQRAAFYFKEALQSLLQNPSNPSKPS 435
           L    E ++  N  +A+ ++ ++     S IG   ++ A YF EAL   +   S PS+ S
Sbjct: 173 LLACAEAVQKENLTVAEALVKQIGFLAVSQIG-AMRKVATYFAEALARRIYRLS-PSQ-S 232

Query: 436 PLSIIFKIAAYKSFSEVSPVLQFANFTSNQALLEAFNGSGRIHIIDFDIGYGGQWASLMQ 495
           P+           F E  P L+FA+FT+NQA+LEAF G  R+H+IDF +  G QW +LMQ
Sbjct: 233 PIDHSLSDTLQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWPALMQ 292

Query: 496 ELALR--GPPFLKITAFASTSTHDDFELGFTQENLKNFANDLNIGFELEIINIESL-NSG 555
            LALR  GPP  ++T     +  +   L      L + A  +++ FE       +L +  
Sbjct: 293 ALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVEFEYRGFVANTLADLD 352

Query: 556 SWPLALNVSENEAIAVN-------LPVGSLSLPMILRFIKHLNPKIVVSVDRGCSRVDAP 615
           +  L L  SE E++AVN       L     ++  +L  +  + P+I   V++  +     
Sbjct: 353 ASMLELRPSEIESVAVNSVFELHKLLGRPGAIDKVLGVVNQIKPEIFTVVEQESNHNSPI 412

Query: 616 FPHRVIHGLHSYSALLESMEAVTVNMDAQLKIERYLVQPCIEKVVTSSQCLNER---LPP 675
           F  R    LH YS L +S+E V    D ++  E YL +     V        ER   L  
Sbjct: 413 FLDRFTESLHYYSTLFDSLEGVPSGQD-KVMSEVYLGKQICNVVACDGPDRVERHETLSQ 472

Query: 676 LKSMFLSSGFSPLTFSNFTESQAECLLQR-TPVQGFHIDKRHSSLVLCWHRKELVSISAW 723
            ++ F S+GF+     +    QA  LL      +G+ +++    L+L WH + L++ SAW
Sbjct: 473 WRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDGCLMLGWHTRPLIATSAW 529

The following BLAST results are available for this feature:

BLAST of CmoCh17G004540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81316	5.4e-133	43.17	Scarecrow-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=SCL6 PE=1 SV=1	[more]
Q7XJM8	1.8e-112	42.53	Scarecrow-like protein 27 OS=Arabidopsis thaliana OX=3702 GN=SCL27 PE=2 SV=1	[more]
Q9M000	2.5e-109	40.21	Scarecrow-like protein 22 OS=Arabidopsis thaliana OX=3702 GN=SCL22 PE=1 SV=1	[more]
O23210	1.2e-52	35.99	Scarecrow-like protein 15 OS=Arabidopsis thaliana OX=3702 GN=SCL15 PE=1 SV=3	[more]
Q6EI06	7.5e-34	30.30	DELLA protein GAIP OS=Cucurbita maxima OX=3661 GN=GAIP PE=2 SV=1	[more]

BLAST of CmoCh17G004540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H426	0.0e+00	100.00	scarecrow-like protein 27 OS=Cucurbita moschata OX=3662 GN=LOC111460231 PE=3 SV=...	[more]
A0A6J1KXZ8	0.0e+00	96.84	scarecrow-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111499225 PE=3 SV=1	[more]
A0A0A0KAR4	0.0e+00	85.15	GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109640 PE=3 S...	[more]
A0A5D3CSI2	0.0e+00	84.91	Scarecrow-like protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3C7R0	0.0e+00	84.51	LOW QUALITY PROTEIN: scarecrow-like protein 6 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of CmoCh17G004540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00150.1	3.9e-134	43.17	GRAS family transcription factor	[more]
AT2G45160.1	1.3e-113	42.53	GRAS family transcription factor	[more]
AT3G60630.1	1.7e-110	40.21	GRAS family transcription factor	[more]
AT4G36710.1	8.8e-54	35.99	GRAS family transcription factor	[more]
AT1G14920.1	2.8e-31	29.64	GRAS family transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 374..722 e-value: 1.8E-92 score: 310.2
IPR005202	Transcription factor GRAS	PANTHER	PTHR31636	OSJNBA0084A10.13 PROTEIN-RELATED	coord: 38..722
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 363..722 score: 56.766296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..44
None	No IPR available	PANTHER	PTHR31636:SF136	SCARECROW-LIKE PROTEIN 6	coord: 38..722

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G004540.1	CmoCh17G004540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding