CmoCh17G004010 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G004010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	tRNA-specific adenosine deaminase 1 isoform X1
Location	Cmo_Chr17: 2667374 .. 2671170 (+)
RNA-Seq Expression	CmoCh17G004010
Synteny	CmoCh17G004010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAATGGAGGATTGCTTCTGTTCATCCTCTTCTTCGGAGAGCTGGGGAGAGACGATTTCGGAGAAGGTATTCTCTCTCTACAACTCTCTCCCAAAGAAAGGCAAGCCTCAGGGTCGTGAAGTCACTGTATTGGCTGCATTTCTCGTTTCATCTCCTTCCGCACAAGGTTCCCTTTCAAAACCCTACCAATTTCCCCTCCGTTTCCTGTTTTATGTGCGAATTTGATGGTGTTAACTCTACTGGTAGTGAAAGTATCCTATTCGTTTTCGTTTTTCAATCGGTGTTCCGCGTTTCTGTTGATTCTAGTTCCAGATGAAAGTTACTCGAACTGTTTTTAAATGTTTTCTATTTTGTTATCGATTTAGATTTGGAAGTTGTGGCGTTAGGGACGGGGACTAAGTGTCTCGGTCGCTCGCAGTTAAGCTCAAATGGTGACGTTGTGAATGATTCACACGCCGAAATAATTGCTCGGAGAGCTTTAATGAGGTTTTACTTATTTCTGCGTTTTTGTTGCTTTCTTTGATTTGTATGAACATTTTCTATGATTTGGTATACTTTTGGTCTCTAGTAAGTGATAAATTATTACGTTTGCGCTTTTGGTTTCTAGGCGTTTATTTTGTCACTGTGCCAGTGAGATTTTGTAGTTTGAGATATTATGTATTTGAGATGAGCTTATAAACTTTGTTCTTTTCCCAATTTGACTCTGTTTACCAGGTTCTTCTACACACAGATTCAACATTTGTCCCAGAACAACTGTGAGAGTGAACATCACAAAACGAAGAAGATGAGGTGTGACAATGTAATAAACTTTTTGTTTCAATTAGATGAGGAGGCTGGTGCTGAACGAAAATATGTCATGAGAAAGGGCTGGAAATTGCATTTATACATATCTCAGTTACCATGTATATTTTCCAATTTCCATGAATTGAATATTGATTTTTTAAAAGAAAGTTTCGTATATGAATTTTGAAATACAATGCACGTGCATCAAATTGTTTGTTCTTTCTTGGGTTTATGCAAGGTGGGGATGCTTCATCTTCAACTCCCAGAGACGTCCAACCTAGAACAGAGGATACGCCACCATGTTTGATTGATGAAGGTATGGATACACTACCACAGGCTAAAATGGAAGATAGTGATTTCTTGCTTATATTTCATGTTTAAGAGGGGAATTTACCTCTTAACATAAAAAAATTTCTTCATTCGTGAAGAATGTATGGGTGGATTCAAATTTCAGGGGATGATTCACAGTGCATAGGTTTCGTTCAGAGGAAGCCTGGTCGTGGTGATACAACATTGTCAGTTAGCTGTTCTGACAAGATAGCTCGATGGAATGTAGCTGGAGTTCAAGGTGTGTTATGCGGTAGAACCATAGCAGTAGAAGTTAACCTTATTAATACCATGCTGCAGTGAGCTTGGCTGTGTGATAATAAGTTATAATCCGGTGACTTAATGTTGAAATGACATTTATTTTGTAGCACAAGCATATTGCCAAATACACGTGTTTTTTGTGTGAGTTATTGTTAGTCACAACTTTCATTTTCTGTTTTGTTAGTTATTTGAGCATGCTTGGATTATGTAATTTCTGACTTAGCTACTATACGTGCGTATCGATTTATCTTTTGCTTTTTAGTTTTTATAATGGTGTTCTGCATCACTATTTGCGGGACTATTTTATGGTTTGAATTTGTAATGTACAAATGCTTTATTTATGCATCAACTGAGATGGTTTCTTCTCATCTTGTATCAGGAGCTCTTCTCTCGTACTTTCTTCAGCCTGTTTATCTTTCCTCTATAACAGTTGGATTGTCCCCTCATAGTGCCAAAAATTGTACACTGAAGGAACAAGTGAAAAGAGCAATATGTGATCGAGTACAGCCATTTTCGAATGAGCTAACGACTCCCTTAAAGGGGAACCAGGTACATTAAGCACTGATCTTAGGTACACAATATGGCAGGACAGGATGACAATATTATGCTTTATAACTTTTTTTTTTAATTCTTTGTGTTAAGTGGATTTGCAGCCATTGTTTTGCACAGCTCCAATACCACCAAAGGAGTTCCAACACTCGGAGTCTGCTTTAAACACGATAACTTGCGGGTACTGTCTCAACTAGATCAAATGTATCTGCAAGAGTTGTCTTGTAATCGATCATATCGTTAAATTAATCTTCCTGGCGAACTTACAGATACTCTATTTGTTGGAATAAGTCTGGCTTGCATGAGGTCGTCCTTGGAACTATTGGAAGAAAGCAAGGAGCCTCTGCTAAAGGGGCACAGTATCCATCAACTGAGTCATCTTTATGCAAGTAATGTATCACTTTAAGCATGGTTTGACTAGCTTGTGAACATAGTTGATCTATTCTGATCAGCATTATATCAATATCTCAGGAAGCGGTTACTGGAAATGTTCTGGTCGCTTAAAAGTGTATGCCCTACTAAATTTCTTGCCAGCAACATCTCTTATAGAACGCTGAAGGTAAATTTTATTTCTGTTTAGTCTGACCACCTTGAACCTTGAAGGAAAACTGTCACTAAGTCTCATCTATAGAGGTCCCGCATTATAAATTTACTGACATTGTTTATCATGCACTATTATATTGTGATGCATCAAATGAAGTCCTTCACATTCAAGTCAACCCCAAGGGTTGGATTCCGTGAAGTAAGTGAATTCAAACATATGGTCATCAGTTCAAGATCCTTTAGTTTACAAACTTTGGACAATAAATCGCAAACTTTTGGTCTATATGATATTATAGGGCTGATAGTCAAATCTCAAACTTGACCCACATAAATGGGTCAATGGATTTTTGGTGTTTGAGGTGGGCACAAGCTTTCCTGAACACCCATAAGAGATAAAGATTCTTCGTGTTCTTTGCTGACCGTCATGATGTTATTGCGCTGAAAAAGAAAAAGATTAGAAAAGAGATACCCTCAGCAATGGCTGTGCTGAAAGTTTGGACACATTTAGTTCATATTGAGAATATAGCAGATGTTTCTAATAGAGGATTTAATGTTGTTAGCATTGTAGACTTGAGATTTTATCATGGCGTTTGTCTAGGCTTCATCGTCTGGCAGTACCGGGCAAGCCATTGCTCATAGAACTAGGTAGTGTCCCAAGAAATTATTCAACACTAGCTGTAGCATAGCAGGTTCTCACTTTCCTACTTTTCGTCATCGTAACTGTGTCACTCCAAAAAGTAAAAGTAATGTAGCGGCCCAAGTCCACCGCTAGCAGAACAATTCTCTTGGGGCTTTTCCGGCTTCCCCTCGAAGCTTTTAAAACGCGTCTCCTAGTTAGTGGTTTCCATGCTCTTATAAAGAATGTTTCGTTCTCCTCATCAACCGATGTGAGATCTCACAAGTAATTAGTTCGATCGTTTTGAAATATAAAACACCTGAAATTGTAGAAAGTAGCTTTCATTTTCCCCTGATAATGATGCCAGCCTCATGTTTTAATCCAATGCAGGATGGATCTCAAGATTACCATTTAACATCTAAAGTTTTCAAAGAACTATCAGCGTTTAAGAACTGGATATCAAAACCTATCAACTACGAGGCGTTCTCCTTTGGATGCGAGTGAGGTACGTGTTTGTTAGCCATCCATTTTAATGCTAATTGAAAGATAAGAGGTGAATATGAATGTTTCTGAATGATCTGCCTCCATGTTTGTACAATCTTTCTTGGTCTATGCCAGTGAAGTAGTTAGCTTGTGGCTTTCTGTATTTTCAACCTCTCAAGGCTCCTAAAGATGTTTTAACAACAGATCACTCTATAAAAACACATGAATTTCAG

mRNA sequence

GAAAAATGGAGGATTGCTTCTGTTCATCCTCTTCTTCGGAGAGCTGGGGAGAGACGATTTCGGAGAAGGTATTCTCTCTCTACAACTCTCTCCCAAAGAAAGGCAAGCCTCAGGGTCGTGAAGTCACTGTATTGGCTGCATTTCTCGTTTCATCTCCTTCCGCACAAGATTTGGAAGTTGTGGCGTTAGGGACGGGGACTAAGTGTCTCGGTCGCTCGCAGTTAAGCTCAAATGGTGACGTTGTGAATGATTCACACGCCGAAATAATTGCTCGGAGAGCTTTAATGAGGTTCTTCTACACACAGATTCAACATTTGTCCCAGAACAACTGTGAGAGTGAACATCACAAAACGAAGAAGATGAGGTGTGACAATGTAATAAACTTTTTGTTTCAATTAGATGAGGAGGCTGGTGCTGAACGAAAATATGTCATGAGAAAGGGCTGGAAATTGCATTTATACATATCTCAGTTACCATGTGGGGATGCTTCATCTTCAACTCCCAGAGACGTCCAACCTAGAACAGAGGATACGCCACCATGTTTGATTGATGAAGGGGATGATTCACAGTGCATAGGTTTCGTTCAGAGGAAGCCTGGTCGTGGTGATACAACATTGTCAGTTAGCTGTTCTGACAAGATAGCTCGATGGAATGTAGCTGGAGTTCAAGGAGCTCTTCTCTCGTACTTTCTTCAGCCTGTTTATCTTTCCTCTATAACAGTTGGATTGTCCCCTCATAGTGCCAAAAATTGTACACTGAAGGAACAAGTGAAAAGAGCAATATGTGATCGAGTACAGCCATTTTCGAATGAGCTAACGACTCCCTTAAAGGGGAACCAGCCATTGTTTTGCACAGCTCCAATACCACCAAAGGAGTTCCAACACTCGGAGTCTGCTTTAAACACGATAACTTGCGGATACTCTATTTGTTGGAATAAGTCTGGCTTGCATGAGGTCGTCCTTGGAACTATTGGAAGAAAGCAAGGAGCCTCTGCTAAAGGGGCACAGTATCCATCAACTGAGTCATCTTTATGCAAGAAGCGGTTACTGGAAATGTTCTGGTCGCTTAAAAGTGTATGCCCTACTAAATTTCTTGCCAGCAACATCTCTTATAGAACGCTGAAGGATGGATCTCAAGATTACCATTTAACATCTAAAGTTTTCAAAGAACTATCAGCGTTTAAGAACTGGATATCAAAACCTATCAACTACGAGGCGTTCTCCTTTGGATGCGAGTGAGGTACGTGTTTGTTAGCCATCCATTTTAATGCTAATTGAAAGATAAGAGGTGAATATGAATGTTTCTGAATGATCTGCCTCCATGTTTGTACAATCTTTCTTGGTCTATGCCAGTGAAGTAGTTAGCTTGTGGCTTTCTGTATTTTCAACCTCTCAAGGCTCCTAAAGATGTTTTAACAACAGATCACTCTATAAAAACACATGAATTTCAG

Coding sequence (CDS)

ATGGAGGATTGCTTCTGTTCATCCTCTTCTTCGGAGAGCTGGGGAGAGACGATTTCGGAGAAGGTATTCTCTCTCTACAACTCTCTCCCAAAGAAAGGCAAGCCTCAGGGTCGTGAAGTCACTGTATTGGCTGCATTTCTCGTTTCATCTCCTTCCGCACAAGATTTGGAAGTTGTGGCGTTAGGGACGGGGACTAAGTGTCTCGGTCGCTCGCAGTTAAGCTCAAATGGTGACGTTGTGAATGATTCACACGCCGAAATAATTGCTCGGAGAGCTTTAATGAGGTTCTTCTACACACAGATTCAACATTTGTCCCAGAACAACTGTGAGAGTGAACATCACAAAACGAAGAAGATGAGGTGTGACAATGTAATAAACTTTTTGTTTCAATTAGATGAGGAGGCTGGTGCTGAACGAAAATATGTCATGAGAAAGGGCTGGAAATTGCATTTATACATATCTCAGTTACCATGTGGGGATGCTTCATCTTCAACTCCCAGAGACGTCCAACCTAGAACAGAGGATACGCCACCATGTTTGATTGATGAAGGGGATGATTCACAGTGCATAGGTTTCGTTCAGAGGAAGCCTGGTCGTGGTGATACAACATTGTCAGTTAGCTGTTCTGACAAGATAGCTCGATGGAATGTAGCTGGAGTTCAAGGAGCTCTTCTCTCGTACTTTCTTCAGCCTGTTTATCTTTCCTCTATAACAGTTGGATTGTCCCCTCATAGTGCCAAAAATTGTACACTGAAGGAACAAGTGAAAAGAGCAATATGTGATCGAGTACAGCCATTTTCGAATGAGCTAACGACTCCCTTAAAGGGGAACCAGCCATTGTTTTGCACAGCTCCAATACCACCAAAGGAGTTCCAACACTCGGAGTCTGCTTTAAACACGATAACTTGCGGATACTCTATTTGTTGGAATAAGTCTGGCTTGCATGAGGTCGTCCTTGGAACTATTGGAAGAAAGCAAGGAGCCTCTGCTAAAGGGGCACAGTATCCATCAACTGAGTCATCTTTATGCAAGAAGCGGTTACTGGAAATGTTCTGGTCGCTTAAAAGTGTATGCCCTACTAAATTTCTTGCCAGCAACATCTCTTATAGAACGCTGAAGGATGGATCTCAAGATTACCATTTAACATCTAAAGTTTTCAAAGAACTATCAGCGTTTAAGAACTGGATATCAAAACCTATCAACTACGAGGCGTTCTCCTTTGGATGCGAGTGA

Protein sequence

MEDCFCSSSSSESWGETISEKVFSLYNSLPKKGKPQGREVTVLAAFLVSSPSAQDLEVVALGTGTKCLGRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMRCDNVINFLFQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQPRTEDTPPCLIDEGDDSQCIGFVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFLQPVYLSSITVGLSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPLKGNQPLFCTAPIPPKEFQHSESALNTITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVCPTKFLASNISYRTLKDGSQDYHLTSKVFKELSAFKNWISKPINYEAFSFGCE

Homology

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BLAST of CmoCh17G004010 vs. ExPASy Swiss-Prot
Match: F4HU58 (tRNA-specific adenosine deaminase TAD1 OS=Arabidopsis thaliana OX=3702 GN=TAD1 PE=1 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 5.1e-120
Identity = 228/418 (54.55%), Postives = 288/418 (68.90%), Query Frame = 0


Query: 12  ESWGETISEKVFSLYNSLPKKGKPQGREVTVLAAFLVSSPSAQDLEVVALGTGTKCLGRS 71
           E WG+T+SEKV S Y SLPKKGKPQGREVTVL+AFLVSSPS QD +V+ALGTGTKC+  S
Sbjct: 3   EDWGKTVSEKVISAYMSLPKKGKPQGREVTVLSAFLVSSPS-QDPKVIALGTGTKCVSGS 62

Query: 72  QLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMRCDN-VINFLFQ 131
            LS  GD+VNDSHAE++ARRAL+RFFY++IQ +   + +S  ++ K+ R D+   + L  
Sbjct: 63  LLSPRGDIVNDSHAEVVARRALIRFFYSEIQRMQLTSGKS--NEAKRQRIDSETSSILES 122

Query: 132 LDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQ---PRTEDTPPCLI------ 191
            D     E KY ++ G  LHLYISQLPCG AS+S+P       P T+     L+      
Sbjct: 123 ADSSCPGEVKYKLKSGCLLHLYISQLPCGYASTSSPLYALKKIPSTQVDDSLLVQASDIC 182

Query: 192 --------------DEGDDSQCIGFVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSY 251
                         ++G+ SQ    VQRKPGRG+TTLSVSCSDKIARWNV GVQGALL  
Sbjct: 183 SSRHSDVPEIGSNSNKGNGSQVADMVQRKPGRGETTLSVSCSDKIARWNVLGVQGALLYQ 242

Query: 252 FLQPVYLSSITVGLSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPLKGNQPLFCTAPIP 311
            LQPVY+S+ITVG S HS  N +L + ++R++ +R+ P S+EL T  + N+PLF  AP+P
Sbjct: 243 VLQPVYISTITVGQSLHSPDNFSLADHLRRSLYERILPLSDELLTSFRLNKPLFFVAPVP 302

Query: 312 PKEFQHSESALNTITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRL 371
           P EFQHSE+A  T+TCGYS+CWN SGLHEV+LGT GRKQG SAKGA YPST+SS+CK+RL
Sbjct: 303 PSEFQHSETAQATLTCGYSLCWNYSGLHEVILGTTGRKQGTSAKGALYPSTQSSICKQRL 362

Query: 372 LEMFWSLKSVCPTKFLASNISYRTLKDGSQDYHLTSKVFKELSAFKNWISKPINYEAF 406
           LE+F         +   S  SYR LK+ + +Y+L SK+FK    F NW+ KP+N E F
Sbjct: 363 LELFLKETHGHKRESSKSKKSYRELKNKATEYYLMSKIFKGKYPFNNWLRKPLNCEDF 417

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BLAST of CmoCh17G004010 vs. ExPASy Swiss-Prot
Match: Q28FE8 (tRNA-specific adenosine deaminase 1 OS=Xenopus tropicalis OX=8364 GN=adat1 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.0e-35
Identity = 135/480 (28.12%), Postives = 205/480 (42.71%), Query Frame = 0


Query: 29  LPKKGKPQ-GREVTVLAAFLVSSPSAQDL----EVVALGTGTKCLGRSQLSSNGDVVNDS 88
           LPK+G P   RE T++AA ++   S +D     +VVA+GTGTKC+G+++L   GDV+ DS
Sbjct: 24  LPKQGLPDPSREWTLMAA-VIQIESVEDTKVIKKVVAMGTGTKCIGQAKLRKTGDVLQDS 83

Query: 89  HAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMRCDNVINFLFQLDEEAGAERKYVM 148
           HAEIIA+R+  R+   Q+                 +   +  + LF    E G   K+++
Sbjct: 84  HAEIIAKRSFQRYLLHQL----------------SLAVSDTKDCLFIPGTEKG---KWML 143

Query: 149 RKGWKLHLYISQLPCGDAS------------SSTPRDV--------------------QP 208
           R       + S  PCGDAS               P +V                    + 
Sbjct: 144 RPEISFVFFTSHTPCGDASIIPVISHEDELGHPLPSEVTEKDHSSNNVCESVNTTYKRKV 203

Query: 209 RTED-----------------TPP---------------------------CLIDEGDDS 268
           R+E+                 T P                           C+  E  DS
Sbjct: 204 RSEEDIGFISKKMKHSIDEILTRPENYEEENRHDFPSTCQKALDVHRTGAKCVAGELQDS 263

Query: 269 -------QCIGFVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFL-QPVYLSSITV 328
                    +G ++ KPGRGD T+S+SCSDK+ARWNV G QGALL +FL QP+YLS++ V
Sbjct: 264 YSPGVNYHTVGVLRIKPGRGDRTMSMSCSDKMARWNVLGCQGALLMHFLQQPIYLSAVVV 323

Query: 329 GLSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPLKGNQPLFCTAPIPPKEFQHSESAL- 388
           G  P S      ++ ++RA+ +R     + L    + N+     + +   EFQH   AL 
Sbjct: 324 GKCPFS------QDAMERALYNRCHKVLS-LPCAFRLNRVQIIQSDL---EFQHGRHALT 383

Query: 389 ------NTITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFW 407
                   + CG ++ W+    H + +   G +QG + K    P   S +CK  +   F 
Sbjct: 384 KKDATRKLVPCGAAVSWSAVPHHPLDVTANGYRQGTTRKAIGSPQCRSRICKAEIFNTFR 443

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BLAST of CmoCh17G004010 vs. ExPASy Swiss-Prot
Match: Q54XP3 (tRNA-specific adenosine deaminase 1 OS=Dictyostelium discoideum OX=44689 GN=adat1 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.3e-34
Identity = 141/539 (26.16%), Postives = 210/539 (38.96%), Query Frame = 0


Query: 29  LPKKGKPQGREVTVLAAFLV---SSPSAQDLEVVALGTGTKCLGRSQLSSNGDVVNDSHA 88
           L KKGKP   E TVLA  ++   ++ S +  +V++LGTG +CLG+S LS+ GDV+NDSHA
Sbjct: 25  LIKKGKPISGEWTVLATLVLVVENTSSYEIKQVLSLGTGNRCLGKSSLSNQGDVLNDSHA 84

Query: 89  EIIARRALMRFFYTQIQHLSQNNCES------EHHKTKKMRCDNVINFLFQLDEEAGAER 148
           EII +R+  +F Y +I +L Q+   +      E+H +     DN         +  G+  
Sbjct: 85  EIICKRSFQKFCYNEILNLLQSKYYNSILFNIEYHDSNNNNKDN---------DNNGSLP 144

Query: 149 KYVMRKGWKLHLYISQLPCGDAS-SSTPRDVQPRTEDTPPCLIDEGDDS----------- 208
              ++KG  LH Y++Q PCGD S     ++ QP        L  +G D            
Sbjct: 145 TISIKKGHSLHFYVNQTPCGDCSIFPFKKETQPENFIEKEKLEKDGKDKIENHEKKEQKD 204

Query: 209 ------------------------------------------------------------ 268
                                                                       
Sbjct: 205 IIKQVDKDKDEENYEDEESKRKLKKVKDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 264

Query: 269 ---------------------------------------QCIGFVQRKPGRGDTTLSVSC 328
                                                    IG ++ KPGRGD T+S+SC
Sbjct: 265 NNNNNNINNNNNQYDDIQRTGAKTVFGEPEDKKLIGVDYHQIGVLRVKPGRGDPTVSMSC 324

Query: 329 SDKIARWNVAGVQGALLSYFL-QPVYLSSITVG-LSPHSAKNCTLKEQVKRAICDRVQPF 388
           SDKIARWNV G+QG+LLS+F+ + ++LSSIT+G L  HS+        + R +  R+ P 
Sbjct: 325 SDKIARWNVLGIQGSLLSHFIKEQIFLSSITIGDLFNHSS--------IYRGLIGRLLPN 384

Query: 389 SNELTT-------------------PLKGNQPLFCTAPIPPKEFQHSESAL--------N 406
               TT                    L  +  +F T      +FQ S+  L         
Sbjct: 385 PTTTTTETSSSSSSSSSSSNTIPNFKLNSDLEIFST----NIQFQFSKLLLESDQQNNNK 444

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BLAST of CmoCh17G004010 vs. ExPASy Swiss-Prot
Match: Q9V3R6 (tRNA-specific adenosine deaminase 1 OS=Drosophila melanogaster OX=7227 GN=Adat1 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.5e-34
Identity = 118/409 (28.85%), Postives = 183/409 (44.74%), Query Frame = 0


Query: 18  ISEKVFSLYNSLPKKGKPQGREVTVLAAFLVSSPSAQDLEVVALGTGTKCLGRSQLSSNG 77
           I+E     + SLPK GKP   + T+LA  +  + + +  ++V+LG GTKC+G S+L  NG
Sbjct: 12  IAELCLKKFESLPKTGKPTANQWTILAGIVEFNRNTEACQLVSLGCGTKCIGESKLCPNG 71

Query: 78  DVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMRCDNVINFLFQLDEEAGA 137
            ++NDSHAE++ARR  +RF Y +++                   D + ++   L      
Sbjct: 72  LILNDSHAEVLARRGFLRFLYQELKQ------------------DRIFHWNSTLS----- 131

Query: 138 ERKYVMRKGWKLHLYISQLPCGDA-----SSSTPRDVQPRTED------TPPCLIDEGDD 197
              Y M +  + H   +Q PCGDA          R  + R ++      T   LI +  D
Sbjct: 132 --TYDMDEHVEFHFLSTQTPCGDACILEEEQPAARAKRQRLDEDSEMVYTGAKLISDLSD 191

Query: 198 S---QCIGFVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFL-QPVYLSSITVGLS 257
               Q  G ++ KPGRG+ TLS+SCSDKIARWNV GVQGALL   + +P+Y SS+     
Sbjct: 192 DPMLQTPGALRTKPGRGERTLSMSCSDKIARWNVIGVQGALLDVLISKPIYFSSLNFCCD 251

Query: 258 PHSAKNCTLKEQVKRAICDR--VQPFSNELTTPLKGNQPLFCTAPIPPKEFQHSESALNT 317
                     E ++RAI  R   + F +    P +    +      P   F+ S+ + + 
Sbjct: 252 DAQL------ESLERAIFKRFDCRTFKHTRFQPQRPQINI-----DPGIRFEFSQRS-DW 311

Query: 318 ITCGYSICWNK--SGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVC 377
                 + W++    L    +   G++QG + K  +      ++ K +L   F  L    
Sbjct: 312 QPSPNGLIWSQVPEELRPYEISVNGKRQGVTKKKMKTSQAALAISKYKLFLTFLELVKFN 371

Query: 378 PTKFL--------ASNISYRTLKDGSQDYHLTSKVFKELSAFKNWISKP 400
           P               I+Y + KD ++DY    +  KE   F  W  KP
Sbjct: 372 PKLSEMFDQQLSDPERIAYASCKDLARDYQFAWREIKE-KYFLQWTKKP 382

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BLAST of CmoCh17G004010 vs. ExPASy Swiss-Prot
Match: Q5ZI16 (tRNA-specific adenosine deaminase 1 OS=Gallus gallus OX=9031 GN=ADAT1 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.6e-33
Identity = 135/517 (26.11%), Postives = 211/517 (40.81%), Query Frame = 0


Query: 16  ETISEKVFSLYNS-LPKKGKPQ-GREVTVLAAFLVSSPSAQDL------------EVVAL 75
           + I+E  +  Y S LPK+GKP   RE T LAA +    +A +             EVVAL
Sbjct: 5   DEIAELCYEHYRSRLPKQGKPDPSREWTSLAAVVKVESAANEAGSAVLGTLQVAKEVVAL 64

Query: 76  GTGTKCLGRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQ------------------- 135
           GTGTKC+G +++   GDV+NDSHAE++A+R+  R+   Q++                   
Sbjct: 65  GTGTKCIGLNKMRKTGDVLNDSHAEVVAKRSFQRYLLHQMRLATSYQQCSIFIPGTETGK 124

Query: 136 -------------------------------HLSQ----------------NNCE----S 195
                                          HLS+                +NC+     
Sbjct: 125 WKLKPNIIFIFFCSHTPCGDASIIPIRETENHLSKSVDGHDIAGQSVLCSSSNCDHRGPE 184

Query: 196 EHHKTKKMRCDNVI--------NFLFQLDEEAGAERKYVMRKG---------------WK 255
           +  K++KM   ++I         F   + E+   ++ +   +G                 
Sbjct: 185 DKRKSEKMASSHMIKRMKNADGGFFSTITEDMAVQQVFAKPEGNVNPECCESSEEMQAAN 244

Query: 256 LHLYISQLPCGDASSSTPRDVQPRTEDTPPCLIDEGDDSQCIGFVQRKPGRGDTTLSVSC 315
                 +L       +  + V     DT    +  G +  C+G ++ KPGRGD T S+SC
Sbjct: 245 KETNAGKLKAVGVYRTGAKFVPGELSDT----LIPGIEYHCVGLLRVKPGRGDRTCSMSC 304

Query: 316 SDKIARWNVAGVQGALLSYFLQ-PVYLSSITVGLSPHSAKNCTLKEQVKRAICDRVQPFS 375
           SDK+ARWNV G QGALL +FLQ PVYLS++ VG  P+S      +E ++RA+ +R +  S
Sbjct: 305 SDKLARWNVLGCQGALLMHFLQYPVYLSAVIVGKCPYS------QEAMQRAVIERCRHIS 364

Query: 376 ----NELTTPLKGNQPLFCTAPIPPKEFQHSESAL---------NTITCGYSICWNKSGL 406
                 LT  ++  Q           +F+HS  A+           + C  +I W+    
Sbjct: 365 LLPDGFLTQEVQLLQ--------SDLQFEHSRQAIQEGQTSSKRKLVPCSAAISWSAVPE 424

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BLAST of CmoCh17G004010 vs. ExPASy TrEMBL
Match: A0A6J1H3J2 (tRNA-specific adenosine deaminase 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460170 PE=4 SV=1)

HSP 1 Score: 844.3 bits (2180), Expect = 2.1e-241
Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 0


Query: 1   MEDCFCSSSSSESWGETISEKVFSLYNSLPKKGKPQGREVTVLAAFLVSSPSAQDLEVVA 60
           MEDCFCSSSSSESWGETISEKVFSLYNSLPKKGKPQGREVTVLAAFLVSSPSAQDLEVVA
Sbjct: 1   MEDCFCSSSSSESWGETISEKVFSLYNSLPKKGKPQGREVTVLAAFLVSSPSAQDLEVVA 60

Query: 61  LGTGTKCLGRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMR 120
           LGTGTKCLGRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMR
Sbjct: 61  LGTGTKCLGRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMR 120

Query: 121 CDNVINFLFQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQPRTEDTPPCL 180
           CDNVINFLFQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQPRTEDTPPCL
Sbjct: 121 CDNVINFLFQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQPRTEDTPPCL 180

Query: 181 IDEGDDSQCIGFVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFLQPVYLSSITVG 240
           IDEGDDSQCIGFVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFLQPVYLSSITVG
Sbjct: 181 IDEGDDSQCIGFVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFLQPVYLSSITVG 240

Query: 241 LSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPLKGNQPLFCTAPIPPKEFQHSESALNT 300
           LSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPLKGNQPLFCTAPIPPKEFQHSESALNT
Sbjct: 241 LSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPLKGNQPLFCTAPIPPKEFQHSESALNT 300

Query: 301 ITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVCPT 360
           ITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVCPT
Sbjct: 301 ITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVCPT 360

Query: 361 KFLASNISYRTLKDGSQDYHLTSKVFKELSAFKNWISKPINYEAFSFGCE 411
           KFLASNISYRTLKDGSQDYHLTSKVFKELSAFKNWISKPINYEAFSFGCE
Sbjct: 361 KFLASNISYRTLKDGSQDYHLTSKVFKELSAFKNWISKPINYEAFSFGCE 410

[Close]

BLAST of CmoCh17G004010 vs. ExPASy TrEMBL
Match: A0A6J1H6X3 (tRNA-specific adenosine deaminase 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460170 PE=4 SV=1)

HSP 1 Score: 832.0 bits (2148), Expect = 1.1e-237
Identity = 407/410 (99.27%), Postives = 407/410 (99.27%), Query Frame = 0


Query: 1   MEDCFCSSSSSESWGETISEKVFSLYNSLPKKGKPQGREVTVLAAFLVSSPSAQDLEVVA 60
           MEDCFCSSSSSESWGETISEKVFSLYNSLPKKGKPQGREVTVLAAFLVSSPSAQDLEVVA
Sbjct: 1   MEDCFCSSSSSESWGETISEKVFSLYNSLPKKGKPQGREVTVLAAFLVSSPSAQDLEVVA 60

Query: 61  LGTGTKCLGRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMR 120
           LGTGTKCLGRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMR
Sbjct: 61  LGTGTKCLGRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMR 120

Query: 121 CDNVINFLFQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQPRTEDTPPCL 180
           CDNVINFLFQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQPRTEDTPPCL
Sbjct: 121 CDNVINFLFQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQPRTEDTPPCL 180

Query: 181 IDEGDDSQCIGFVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFLQPVYLSSITVG 240
           IDEGDDSQCIGFVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFLQPVYLSSITVG
Sbjct: 181 IDEGDDSQCIGFVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFLQPVYLSSITVG 240

Query: 241 LSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPLKGNQPLFCTAPIPPKEFQHSESALNT 300
           LSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPLK   PLFCTAPIPPKEFQHSESALNT
Sbjct: 241 LSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPLK---PLFCTAPIPPKEFQHSESALNT 300

Query: 301 ITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVCPT 360
           ITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVCPT
Sbjct: 301 ITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVCPT 360

Query: 361 KFLASNISYRTLKDGSQDYHLTSKVFKELSAFKNWISKPINYEAFSFGCE 411
           KFLASNISYRTLKDGSQDYHLTSKVFKELSAFKNWISKPINYEAFSFGCE
Sbjct: 361 KFLASNISYRTLKDGSQDYHLTSKVFKELSAFKNWISKPINYEAFSFGCE 407

[Close]

BLAST of CmoCh17G004010 vs. ExPASy TrEMBL
Match: A0A6J1L0J0 (tRNA-specific adenosine deaminase 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499268 PE=4 SV=1)

HSP 1 Score: 825.9 bits (2132), Expect = 7.6e-236
Identity = 401/409 (98.04%), Postives = 404/409 (98.78%), Query Frame = 0


Query: 1   MEDCFCSSSSSESWGETISEKVFSLYNSLPKKGKPQGREVTVLAAFLVSSPSAQDLEVVA 60
           MEDCFCSS SSESWGET+SEKVFSLYNSLPKKGKPQG EVTVLAAFLVSSPSAQDLEVVA
Sbjct: 1   MEDCFCSSPSSESWGETVSEKVFSLYNSLPKKGKPQGHEVTVLAAFLVSSPSAQDLEVVA 60

Query: 61  LGTGTKCLGRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMR 120
           LGTGTKCLGRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMR
Sbjct: 61  LGTGTKCLGRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMR 120

Query: 121 CDNVINFLFQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQPRTEDTPPCL 180
           CDNVINFLFQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQPRTEDTPPCL
Sbjct: 121 CDNVINFLFQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQPRTEDTPPCL 180

Query: 181 IDEGDDSQCIGFVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFLQPVYLSSITVG 240
           IDEGDDSQCIG VQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFLQPVYLSSITVG
Sbjct: 181 IDEGDDSQCIGLVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFLQPVYLSSITVG 240

Query: 241 LSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPLKGNQPLFCTAPIPPKEFQHSESALNT 300
           LSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPL+ NQPLFCTAPIPPKEFQHSESALNT
Sbjct: 241 LSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPLEVNQPLFCTAPIPPKEFQHSESALNT 300

Query: 301 ITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVCPT 360
           ITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVCPT
Sbjct: 301 ITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVCPT 360

Query: 361 KFLASNISYRTLKDGSQDYHLTSKVFKELSAFKNWISKPINYEAFSFGC 410
           KFLASNISYRTLKDGSQDY+LTSKVFKE SAFKNWISKPINYEAFSFGC
Sbjct: 361 KFLASNISYRTLKDGSQDYYLTSKVFKEQSAFKNWISKPINYEAFSFGC 409

[Close]

BLAST of CmoCh17G004010 vs. ExPASy TrEMBL
Match: A0A6J1KY57 (tRNA-specific adenosine deaminase 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499268 PE=4 SV=1)

HSP 1 Score: 817.4 bits (2110), Expect = 2.7e-233
Identity = 399/409 (97.56%), Postives = 402/409 (98.29%), Query Frame = 0


Query: 1   MEDCFCSSSSSESWGETISEKVFSLYNSLPKKGKPQGREVTVLAAFLVSSPSAQDLEVVA 60
           MEDCFCSS SSESWGET+SEKVFSLYNSLPKKGKPQG EVTVLAAFLVSSPSAQDLEVVA
Sbjct: 1   MEDCFCSSPSSESWGETVSEKVFSLYNSLPKKGKPQGHEVTVLAAFLVSSPSAQDLEVVA 60

Query: 61  LGTGTKCLGRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMR 120
           LGTGTKCLGRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMR
Sbjct: 61  LGTGTKCLGRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMR 120

Query: 121 CDNVINFLFQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQPRTEDTPPCL 180
           CDNVINFLFQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQPRTEDTPPCL
Sbjct: 121 CDNVINFLFQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQPRTEDTPPCL 180

Query: 181 IDEGDDSQCIGFVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFLQPVYLSSITVG 240
           IDEGDDSQCIG VQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFLQPVYLSSITVG
Sbjct: 181 IDEGDDSQCIGLVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFLQPVYLSSITVG 240

Query: 241 LSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPLKGNQPLFCTAPIPPKEFQHSESALNT 300
           LSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPL   +PLFCTAPIPPKEFQHSESALNT
Sbjct: 241 LSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPL---EPLFCTAPIPPKEFQHSESALNT 300

Query: 301 ITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVCPT 360
           ITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVCPT
Sbjct: 301 ITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVCPT 360

Query: 361 KFLASNISYRTLKDGSQDYHLTSKVFKELSAFKNWISKPINYEAFSFGC 410
           KFLASNISYRTLKDGSQDY+LTSKVFKE SAFKNWISKPINYEAFSFGC
Sbjct: 361 KFLASNISYRTLKDGSQDYYLTSKVFKEQSAFKNWISKPINYEAFSFGC 406

[Close]

BLAST of CmoCh17G004010 vs. ExPASy TrEMBL
Match: A0A5D3BVY3 (tRNA-specific adenosine deaminase 1 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00970 PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.6e-204
Identity = 349/401 (87.03%), Postives = 370/401 (92.27%), Query Frame = 0


Query: 9   SSSESWGETISEKVFSLYNSLPKKGKPQGREVTVLAAFLVSSPSAQDLEVVALGTGTKCL 68
           SS E WGETISEKV S+YN+LPKKGKPQGREVTVLAAFL+SSPS QDLEVVALGTGTKCL
Sbjct: 6   SSPERWGETISEKVLSVYNTLPKKGKPQGREVTVLAAFLLSSPSPQDLEVVALGTGTKCL 65

Query: 69  GRSQLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMRCDNVINFL 128
           GRSQLSSNGDVVNDSHAE IARRALMRFFYTQI H SQ+NCESEHHKTKKMRCDNV NFL
Sbjct: 66  GRSQLSSNGDVVNDSHAEAIARRALMRFFYTQIHHQSQSNCESEHHKTKKMRCDNVNNFL 125

Query: 129 FQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQPRTEDTPPCLIDEGDDSQ 188
            QLDEEAGAERKYVMRKGWKLHLYISQLPCGDASS   RDVQPR+++  PCL D+GDDSQ
Sbjct: 126 LQLDEEAGAERKYVMRKGWKLHLYISQLPCGDASSPPTRDVQPRSDNVAPCLFDKGDDSQ 185

Query: 189 CIGFVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSYFLQPVYLSSITVGLSPHSAKN 248
           C G VQRKPGRGDTTLSVSCSDKIARWNVAG+QGALLSYFLQPV+LSSITVGLSPHSAKN
Sbjct: 186 CKGSVQRKPGRGDTTLSVSCSDKIARWNVAGLQGALLSYFLQPVFLSSITVGLSPHSAKN 245

Query: 249 CTLKEQVKRAICDRVQPFSNELTTPLKGNQPLFCTAPIPPKEFQHSESALNTITCGYSIC 308
           C ++ Q+K A+CDRVQ FSNEL T LK NQPLFCTAPIPPKEFQHSESALNTITCGYSIC
Sbjct: 246 CIVEGQLKSAVCDRVQSFSNELMTSLKVNQPLFCTAPIPPKEFQHSESALNTITCGYSIC 305

Query: 309 WNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSVCPTKFLASNIS 368
           WNKSGLHEVVLGT GRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKS C +KF +++I 
Sbjct: 306 WNKSGLHEVVLGTTGRKQGASAKGAQYPSTESSLCKKRLLEMFWSLKSECTSKFPSTDIP 365

Query: 369 YRTLKDGSQDYHLTSKVFKELSAFKNWISKPINYEAFSFGC 410
           YRTLKDGSQDY+LTSK+FKE  AF+NWISKPINYEAFSFGC
Sbjct: 366 YRTLKDGSQDYYLTSKIFKEQPAFRNWISKPINYEAFSFGC 406

[Close]

BLAST of CmoCh17G004010 vs. TAIR 10
Match: AT1G01760.1 (adenosine deaminases;RNA binding;RNA binding;adenosine deaminases )

HSP 1 Score: 432.6 bits (1111), Expect = 3.6e-121
Identity = 228/418 (54.55%), Postives = 288/418 (68.90%), Query Frame = 0


Query: 12  ESWGETISEKVFSLYNSLPKKGKPQGREVTVLAAFLVSSPSAQDLEVVALGTGTKCLGRS 71
           E WG+T+SEKV S Y SLPKKGKPQGREVTVL+AFLVSSPS QD +V+ALGTGTKC+  S
Sbjct: 3   EDWGKTVSEKVISAYMSLPKKGKPQGREVTVLSAFLVSSPS-QDPKVIALGTGTKCVSGS 62

Query: 72  QLSSNGDVVNDSHAEIIARRALMRFFYTQIQHLSQNNCESEHHKTKKMRCDN-VINFLFQ 131
            LS  GD+VNDSHAE++ARRAL+RFFY++IQ +   + +S  ++ K+ R D+   + L  
Sbjct: 63  LLSPRGDIVNDSHAEVVARRALIRFFYSEIQRMQLTSGKS--NEAKRQRIDSETSSILES 122

Query: 132 LDEEAGAERKYVMRKGWKLHLYISQLPCGDASSSTPRDVQ---PRTEDTPPCLI------ 191
            D     E KY ++ G  LHLYISQLPCG AS+S+P       P T+     L+      
Sbjct: 123 ADSSCPGEVKYKLKSGCLLHLYISQLPCGYASTSSPLYALKKIPSTQVDDSLLVQASDIC 182

Query: 192 --------------DEGDDSQCIGFVQRKPGRGDTTLSVSCSDKIARWNVAGVQGALLSY 251
                         ++G+ SQ    VQRKPGRG+TTLSVSCSDKIARWNV GVQGALL  
Sbjct: 183 SSRHSDVPEIGSNSNKGNGSQVADMVQRKPGRGETTLSVSCSDKIARWNVLGVQGALLYQ 242

Query: 252 FLQPVYLSSITVGLSPHSAKNCTLKEQVKRAICDRVQPFSNELTTPLKGNQPLFCTAPIP 311
            LQPVY+S+ITVG S HS  N +L + ++R++ +R+ P S+EL T  + N+PLF  AP+P
Sbjct: 243 VLQPVYISTITVGQSLHSPDNFSLADHLRRSLYERILPLSDELLTSFRLNKPLFFVAPVP 302

Query: 312 PKEFQHSESALNTITCGYSICWNKSGLHEVVLGTIGRKQGASAKGAQYPSTESSLCKKRL 371
           P EFQHSE+A  T+TCGYS+CWN SGLHEV+LGT GRKQG SAKGA YPST+SS+CK+RL
Sbjct: 303 PSEFQHSETAQATLTCGYSLCWNYSGLHEVILGTTGRKQGTSAKGALYPSTQSSICKQRL 362

Query: 372 LEMFWSLKSVCPTKFLASNISYRTLKDGSQDYHLTSKVFKELSAFKNWISKPINYEAF 406
           LE+F         +   S  SYR LK+ + +Y+L SK+FK    F NW+ KP+N E F
Sbjct: 363 LELFLKETHGHKRESSKSKKSYRELKNKATEYYLMSKIFKGKYPFNNWLRKPLNCEDF 417

The following BLAST results are available for this feature:

BLAST of CmoCh17G004010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HU58	5.1e-120	54.55	tRNA-specific adenosine deaminase TAD1 OS=Arabidopsis thaliana OX=3702 GN=TAD1 P...	[more]
Q28FE8	3.0e-35	28.13	tRNA-specific adenosine deaminase 1 OS=Xenopus tropicalis OX=8364 GN=adat1 PE=2 ...	[more]
Q54XP3	3.3e-34	26.16	tRNA-specific adenosine deaminase 1 OS=Dictyostelium discoideum OX=44689 GN=adat...	[more]
Q9V3R6	9.5e-34	28.85	tRNA-specific adenosine deaminase 1 OS=Drosophila melanogaster OX=7227 GN=Adat1 ...	[more]
Q5ZI16	3.6e-33	26.11	tRNA-specific adenosine deaminase 1 OS=Gallus gallus OX=9031 GN=ADAT1 PE=2 SV=1	[more]

BLAST of CmoCh17G004010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3J2	2.1e-241	100.00	tRNA-specific adenosine deaminase 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1H6X3	1.1e-237	99.27	tRNA-specific adenosine deaminase 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1L0J0	7.6e-236	98.04	tRNA-specific adenosine deaminase 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1KY57	2.7e-233	97.56	tRNA-specific adenosine deaminase 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5D3BVY3	1.6e-204	87.03	tRNA-specific adenosine deaminase 1 isoform X4 OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of CmoCh17G004010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01760.1	3.6e-121	54.55	adenosine deaminases;RNA binding;RNA binding;adenosine deaminases	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002466	Adenosine deaminase/editase	SMART	SM00552	adara_8	coord: 13..406 e-value: 1.6E-98 score: 343.3
IPR002466	Adenosine deaminase/editase	PFAM	PF02137	A_deamin	coord: 60..399 e-value: 1.6E-84 score: 284.2
IPR002466	Adenosine deaminase/editase	PROSITE	PS50141	A_DEAMIN_EDITASE	coord: 60..405 score: 51.651932
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..178
None	No IPR available	PANTHER	PTHR10910:SF62	A-TO-I RNA EDITING REGULATOR ADR-1	coord: 8..407
None	No IPR available	PANTHER	PTHR10910	EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN	coord: 8..407

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G004010.1	CmoCh17G004010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006382	adenosine to inosine editing
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003726	double-stranded RNA adenosine deaminase activity
molecular_function	GO:0003725	double-stranded RNA binding
molecular_function	GO:0008251	tRNA-specific adenosine deaminase activity
molecular_function	GO:0004000	adenosine deaminase activity
molecular_function	GO:0003723	RNA binding