CmoCh17G002480 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAAACCTCCATTGCTATCTTCTTCCTCTTCTTCTTCATTTATCAAGCTTTGAACCAGAATGGTAGCCGGCGTTGACGGTCGAGTATCATTCTCGACGGCGGCACACTTGCACGGCGCAATGGCATTGCAGAAAATCAGGAGCTCCATCTTGCAGGTGAGGTTCTGTAATGGAGAACTCATGGGGAAGAAGCTTACCTTGCAACAGAGGAAGCATGCCGTTAACTACATTCCAAATGCCAGAAGGAAAGTTCGTGTGTCATCTCTTCTTGCCAATATAGCAGAATCTGAATCCAAGGTAAGCTAATGCAAAGCCTCTTTCAAATTTTGTTCTAACTTAGAATCTTCGTACGATTAGTATTCGAAAGAGGTTTTAACGATAGTTCGATGTAGTTGAAGGAACTGAACATGGAAAAACCTGACCCGAGGACGGTGGTAGCGATTGTACTCGGAGGTGGAGCGGGAACTCGTTTGTTCCCGCTCACGAAACAGAGAGCAAAGCCAGCGGTGATTATTGCCTCTTCTTGAATCTCTGCGTCTTATCAAATTGATTTAGGTCTTATCTTCAAATCTCCATAAATTTTAGGTTCCAATCGGTGGAGCTTATAGGTTGATCGATGTGCCGATGAGCAATTGCATAAACAGCGGAATCAACAAGGTTTACATTCTCACGCAATTCAACTCTACATCGCTCAATCGGCATCTCGCTCGTGCCTATAACTTCGGTGGCGGAGTCACCTTGGGCGATGGTTATGTAGAGGTAATTTCTTAATTTTTCATATCGATTTATATCGTTTTGCAATTTTTATGGTGAATAAACAGAGTGGTGAAAGATTTCGACGAATTTCTCGTCATTATTGTTGCAGGTTCTAGCAGCGACTCAAACTCCAGGAAAGGCTGGAAAGCAGTGGTTCCAAGGGACTGCCGATGCAGTACGACAGTTCCATTGGCTCTTTGAGGTATTTATAAATTAG CAAACCTCCATTGCTATCTTCTTCCTCTTCTTCTTCATTTATCAAGCTTTGAACCAGAATGGTAGCCGGCGTTGACGGTCGAGTATCATTCTCGACGGCGGCACACTTGCACGGCGCAATGGCATTGCAGAAAATCAGGAGCTCCATCTTGCAGGTGAGGTTCTGTAATGGAGAACTCATGGGGAAGAAGCTTACCTTGCAACAGAGGAAGCATGCCGTTAACTACATTCCAAATGCCAGAAGGAAAGTTCGTGTGTCATCTCTTCTTGCCAATATAGCAGAATCTGAATCCAAGTTGAAGGAACTGAACATGGAAAAACCTGACCCGAGGACGGTGGTAGCGATTGTACTCGGAGGTGGAGCGGGAACTCGTTTGTTCCCGCTCACGAAACAGAGAGCAAAGCCAGCGGTTCCAATCGGTGGAGCTTATAGGTTGATCGATGTGCCGATGAGCAATTGCATAAACAGCGGAATCAACAAGGTTTACATTCTCACGCAATTCAACTCTACATCGCTCAATCGGCATCTCGCTCGTGCCTATAACTTCGGTGGCGGAGTCACCTTGGGCGATGGTTATGTAGAGGTTCTAGCAGCGACTCAAACTCCAGGAAAGGCTGGAAAGCAGTGGTTCCAAGGGACTGCCGATGCAGTACGACAGTTCCATTGGCTCTTTGAGGTATTTATAAATTAG ATGGTAGCCGGCGTTGACGGTCGAGTATCATTCTCGACGGCGGCACACTTGCACGGCGCAATGGCATTGCAGAAAATCAGGAGCTCCATCTTGCAGGTGAGGTTCTGTAATGGAGAACTCATGGGGAAGAAGCTTACCTTGCAACAGAGGAAGCATGCCGTTAACTACATTCCAAATGCCAGAAGGAAAGTTCGTGTGTCATCTCTTCTTGCCAATATAGCAGAATCTGAATCCAAGTTGAAGGAACTGAACATGGAAAAACCTGACCCGAGGACGGTGGTAGCGATTGTACTCGGAGGTGGAGCGGGAACTCGTTTGTTCCCGCTCACGAAACAGAGAGCAAAGCCAGCGGTTCCAATCGGTGGAGCTTATAGGTTGATCGATGTGCCGATGAGCAATTGCATAAACAGCGGAATCAACAAGGTTTACATTCTCACGCAATTCAACTCTACATCGCTCAATCGGCATCTCGCTCGTGCCTATAACTTCGGTGGCGGAGTCACCTTGGGCGATGGTTATGTAGAGGTTCTAGCAGCGACTCAAACTCCAGGAAAGGCTGGAAAGCAGTGGTTCCAAGGGACTGCCGATGCAGTACGACAGTTCCATTGGCTCTTTGAGGTATTTATAAATTAG MVAGVDGRVSFSTAAHLHGAMALQKIRSSILQVRFCNGELMGKKLTLQQRKHAVNYIPNARRKVRVSSLLANIAESESKLKELNMEKPDPRTVVAIVLGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGGGVTLGDGYVEVLAATQTPGKAGKQWFQGTADAVRQFHWLFEVFIN Homology
BLAST of CmoCh17G002480 vs. ExPASy Swiss-Prot
Match: P55229 (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADG2 PE=1 SV=3) HSP 1 Score: 249.6 bits (636), Expect = 3.1e-65 Identity = 134/212 (63.21%), Postives = 153/212 (72.17%), Query Frame = 0
BLAST of CmoCh17G002480 vs. ExPASy Swiss-Prot
Match: P55243 (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4113 GN=AGPS3 PE=2 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 3.4e-59 Identity = 122/168 (72.62%), Postives = 135/168 (80.36%), Query Frame = 0
BLAST of CmoCh17G002480 vs. ExPASy Swiss-Prot
Match: Q6AVT2 (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica OX=39947 GN=AGPL1 PE=1 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.3e-55 Identity = 102/122 (83.61%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of CmoCh17G002480 vs. ExPASy Swiss-Prot
Match: P55230 (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APL2 PE=1 SV=2) HSP 1 Score: 210.3 bits (534), Expect = 2.1e-53 Identity = 99/141 (70.21%), Postives = 114/141 (80.85%), Query Frame = 0
BLAST of CmoCh17G002480 vs. ExPASy Swiss-Prot
Match: P55233 (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris OX=161934 GN=AGPS1 PE=2 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 2.8e-53 Identity = 98/120 (81.67%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of CmoCh17G002480 vs. ExPASy TrEMBL
Match: A0A6J1H645 (Glucose-1-phosphate adenylyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111460369 PE=3 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 3.9e-111 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CmoCh17G002480 vs. ExPASy TrEMBL
Match: A0A6J1KXS2 (Glucose-1-phosphate adenylyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111499163 PE=3 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.5e-110 Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0
BLAST of CmoCh17G002480 vs. ExPASy TrEMBL
Match: A0A6J1CAQ7 (Glucose-1-phosphate adenylyltransferase OS=Momordica charantia OX=3673 GN=LOC111009522 PE=3 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 2.0e-91 Identity = 177/207 (85.51%), Postives = 189/207 (91.30%), Query Frame = 0
BLAST of CmoCh17G002480 vs. ExPASy TrEMBL
Match: A0A0A0KEY8 (Glucose-1-phosphate adenylyltransferase OS=Cucumis sativus OX=3659 GN=Csa_6G153460 PE=3 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 5.7e-86 Identity = 163/196 (83.16%), Postives = 179/196 (91.33%), Query Frame = 0
BLAST of CmoCh17G002480 vs. ExPASy TrEMBL
Match: A0A5A7STU9 (Glucose-1-phosphate adenylyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00680 PE=3 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 4.8e-85 Identity = 164/196 (83.67%), Postives = 178/196 (90.82%), Query Frame = 0
BLAST of CmoCh17G002480 vs. TAIR 10
Match: AT5G19220.1 (ADP glucose pyrophosphorylase large subunit 1 ) HSP 1 Score: 249.6 bits (636), Expect = 2.2e-66 Identity = 134/212 (63.21%), Postives = 153/212 (72.17%), Query Frame = 0
BLAST of CmoCh17G002480 vs. TAIR 10
Match: AT1G27680.1 (ADPGLC-PPase large subunit ) HSP 1 Score: 210.3 bits (534), Expect = 1.5e-54 Identity = 99/141 (70.21%), Postives = 114/141 (80.85%), Query Frame = 0
BLAST of CmoCh17G002480 vs. TAIR 10
Match: AT4G39210.1 (Glucose-1-phosphate adenylyltransferase family protein ) HSP 1 Score: 192.2 bits (487), Expect = 4.2e-49 Identity = 98/183 (53.55%), Postives = 129/183 (70.49%), Query Frame = 0
BLAST of CmoCh17G002480 vs. TAIR 10
Match: AT2G21590.1 (Glucose-1-phosphate adenylyltransferase family protein ) HSP 1 Score: 189.1 bits (479), Expect = 3.6e-48 Identity = 98/172 (56.98%), Postives = 118/172 (68.60%), Query Frame = 0
BLAST of CmoCh17G002480 vs. TAIR 10
Match: AT2G21590.2 (Glucose-1-phosphate adenylyltransferase family protein ) HSP 1 Score: 189.1 bits (479), Expect = 3.6e-48 Identity = 98/172 (56.98%), Postives = 118/172 (68.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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