CmoCh17G001130 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G001130
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	cyclin-dependent kinase inhibitor 5
Location	Cmo_Chr17: 602277 .. 604401 (-)
RNA-Seq Expression	CmoCh17G001130
Synteny	CmoCh17G001130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCCCCTCTGCTTCTTCTTCTTCCTTCATTTTCCCTTCTTGGGCTCTGCAACTTTCTTCTTCAATCCCTTCTGTGTTGGGGCCATTTCCTTCGGTCTGTGTCTGGTTCGCTAACTTCATGAAAGCTTGCGTTAGGTGGAATTAATGGGGAAGTACATGAGGAAAACCAAGTCATTAGGCGAAGTTGCAGTCATGGAGGTTTCACAGTCCTCTCTTGGGGTTTTGACTAGGGCTAAGACTCTAGCCTTGCGTCGTCTCCAACAATCTCCGACGCCGTCGCCGTCGCCGTCTCCGGTTGCTTCTGGTTCTTATCTTCAGCTTAGGAGCCGTAGGCTTGAGAAGCCACCGGTTGTATTTTCTGGCCATGAATCGAAGAGGCAGAAGCAAAGCCCTAAAGAGGGCTGCACGAGAAACCCTAGCCCTAGGGTCAGTTCTAGTTTGAGGCCGGCCATGCCGGAAAAGTCGGTCTCGCTTGGCCGTGTTAATGAAGAGGGGGATCACACGGCGGAGGAGGAGGCGGCGGCGGCGGCAGAGGAATCCGTCGGGAAATTTGATGAAATTCATGCCAGTGGAAGTAAGAATGAGAATATTGATTTGGTCATTGAAGAGGCCTCGTTTGGTGAAAATAATTTGGATTTTGAGAGCAGAGAGAGGTGGGATTTCTTCTGTTTTTCCCCTCATTTTCTTGTTCCATTTAATTAACGTTGGCTGAATTTTGTTATCCTTCATGACTTCCGTACCTAAGATTTTCGACATTTTGGAGACTGAAATTGTCCATTTATAGAGCTAGCGGTGTCTGGTGAAAAACATGCAAGAGGTTTTACTCTGAAATTTTCATTTCCATGATATTGTTGGCTATGAATGCGTTAAGGTCGAAATTAAGCTTCAATTTGTTGTTGTTCATCTCTTGGTGTTGAATTTTCTGTCTGTGGCCCTCGTTTTTTCTCTTCATTAACTTTGTATTTTGGAATCAAACTTGAAATTGAGCATCCAGATTCTTGTGTTCTAGGATTTTCTACAGCGCAAAGGCCCCAGATATAATCTTTCCGCCATCACTTTTTTTTTTTAATTGAAAATTTCATGATGGTATTTGTCAAACTTTTATGCGCACCTTGTTTATATGTTCATACTTTTTTAGGCTCCTGTTAGACTACCTTTCCTATAGAGAGCTATTTTATTACGCAGATGACTTTTTAGTGGTTATTTTTTTTAACTTTTCCTTGGCACATTGTCCTGGGATTCTCTTCCCCAGTTGAAATGGTCATTCAAGACTATCATTTTCTTGTTTGTATATCATGTGTTTGTTCTTTTGTTTACTCTGCTTTTTCGCCCATTTATTCCGCTTGAAAGGAAAAAACTTATAGATGTATTTGCTTGTAATTTTTTCTGTTTGTCTTGTTCTGGAAGAGAAGGATTTTGAAATGACTTTTTTTTTTTTTTTTTATCCTTTTTCTCTTTTCCTTGGTTGGAACTGGAGGTACAGTCGCAAGGTTTACTTTCCATGGATAGACCACCTTAATGAATTTTTTTTTTCTTCTGTTTTTTTGTTACCATGATTATTGAAAATTTGAATGGTAATTATGTTCTTCAAACGTTAAATGGAGGTAAAAAGGGTATTCAGTTACTGAAATGTTACTTGAGGTAATATCCACTTGAAATCAACTCGGTGTTTCTCAACGTTTGGGTCATCTGATTACTACATTGTTTATCATTGTTTCTCAGTTTGCTATGTCTAACGGAGGATGCTTTGGATTGTACCAGGAGTACTAGGGAATCTACTCCTTCCAGTTTGATAAGGAATCCTGATATCATCAGAACACCCAGTTCTACAACCAGGCCAACATCCAGCATGATCGAAACTAACCGTAGAAATCTGTACTCATCTAATCGACACATACCGACAGCTAGTGAAATGGACGAGTTTTTTGCTCTTGCTGAAGAGAAGCAGCAGCGACACTTCATTGAGAAGTATGTTATAACATGTACATTTCTTCCAAAGCTGTAAAAGTACCTTTGTTCGCACTAGTAACAGTCTCAATGCTATGATGTTTGCAGGTACAACTTCGATCCCGTGAATGATACGCCGCTTCCAGGCCGTTACGAATGGGAGAAGTTGCAACCATAG

mRNA sequence

CCCCCCCTCTGCTTCTTCTTCTTCCTTCATTTTCCCTTCTTGGGCTCTGCAACTTTCTTCTTCAATCCCTTCTGTGTTGGGGCCATTTCCTTCGGTCTGTGTCTGGTTCGCTAACTTCATGAAAGCTTGCGTTAGGTGGAATTAATGGGGAAGTACATGAGGAAAACCAAGTCATTAGGCGAAGTTGCAGTCATGGAGGTTTCACAGTCCTCTCTTGGGGTTTTGACTAGGGCTAAGACTCTAGCCTTGCGTCGTCTCCAACAATCTCCGACGCCGTCGCCGTCGCCGTCTCCGGTTGCTTCTGGTTCTTATCTTCAGCTTAGGAGCCGTAGGCTTGAGAAGCCACCGGTTGTATTTTCTGGCCATGAATCGAAGAGGCAGAAGCAAAGCCCTAAAGAGGGCTGCACGAGAAACCCTAGCCCTAGGGTCAGTTCTAGTTTGAGGCCGGCCATGCCGGAAAAGTCGGTCTCGCTTGGCCGTGTTAATGAAGAGGGGGATCACACGGCGGAGGAGGAGGCGGCGGCGGCGGCAGAGGAATCCGTCGGGAAATTTGATGAAATTCATGCCAGTGGAAGTAAGAATGAGAATATTGATTTGGTCATTGAAGAGGCCTCGTTTGGTGAAAATAATTTGGATTTTGAGAGCAGAGAGAGGAGTACTAGGGAATCTACTCCTTCCAGTTTGATAAGGAATCCTGATATCATCAGAACACCCAGTTCTACAACCAGGCCAACATCCAGCATGATCGAAACTAACCGTAGAAATCTGTACTCATCTAATCGACACATACCGACAGCTAGTGAAATGGACGAGTTTTTTGCTCTTGCTGAAGAGAAGCAGCAGCGACACTTCATTGAGAAGTACAACTTCGATCCCGTGAATGATACGCCGCTTCCAGGCCGTTACGAATGGGAGAAGTTGCAACCATAG

Coding sequence (CDS)

ATGGGGAAGTACATGAGGAAAACCAAGTCATTAGGCGAAGTTGCAGTCATGGAGGTTTCACAGTCCTCTCTTGGGGTTTTGACTAGGGCTAAGACTCTAGCCTTGCGTCGTCTCCAACAATCTCCGACGCCGTCGCCGTCGCCGTCTCCGGTTGCTTCTGGTTCTTATCTTCAGCTTAGGAGCCGTAGGCTTGAGAAGCCACCGGTTGTATTTTCTGGCCATGAATCGAAGAGGCAGAAGCAAAGCCCTAAAGAGGGCTGCACGAGAAACCCTAGCCCTAGGGTCAGTTCTAGTTTGAGGCCGGCCATGCCGGAAAAGTCGGTCTCGCTTGGCCGTGTTAATGAAGAGGGGGATCACACGGCGGAGGAGGAGGCGGCGGCGGCGGCAGAGGAATCCGTCGGGAAATTTGATGAAATTCATGCCAGTGGAAGTAAGAATGAGAATATTGATTTGGTCATTGAAGAGGCCTCGTTTGGTGAAAATAATTTGGATTTTGAGAGCAGAGAGAGGAGTACTAGGGAATCTACTCCTTCCAGTTTGATAAGGAATCCTGATATCATCAGAACACCCAGTTCTACAACCAGGCCAACATCCAGCATGATCGAAACTAACCGTAGAAATCTGTACTCATCTAATCGACACATACCGACAGCTAGTGAAATGGACGAGTTTTTTGCTCTTGCTGAAGAGAAGCAGCAGCGACACTTCATTGAGAAGTACAACTTCGATCCCGTGAATGATACGCCGCTTCCAGGCCGTTACGAATGGGAGAAGTTGCAACCATAG

Protein sequence

MGKYMRKTKSLGEVAVMEVSQSSLGVLTRAKTLALRRLQQSPTPSPSPSPVASGSYLQLRSRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEEGDHTAEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASFGENNLDFESRERSTRESTPSSLIRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRHIPTASEMDEFFALAEEKQQRHFIEKYNFDPVNDTPLPGRYEWEKLQP

Homology

[Close]

BLAST of CmoCh17G001130 vs. ExPASy Swiss-Prot
Match: Q8GYJ3 (Cyclin-dependent kinase inhibitor 4 OS=Arabidopsis thaliana OX=3702 GN=KRP4 PE=1 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-37
Identity = 124/313 (39.62%), Postives = 167/313 (53.35%), Query Frame = 0


Query: 1   MGKYMRKTKSLG-----------------EVAVMEV----SQSSLGVLTRAKTLALRRLQ 60
           MGKY+RK+K  G                  +A+M+V    S SSLGVLTRAK+LAL++ Q
Sbjct: 1   MGKYIRKSKIDGAGAGAGGGGGGGGGGESSIALMDVVSPSSSSSLGVLTRAKSLALQQQQ 60

Query: 61  QS------------PTPSPSPSPVAS-------------GSYLQLRSRRLE-KPPVVFSG 120
           Q             P  S SP+P +              GSYLQLRSRRL+ KPP+V   
Sbjct: 61  QRCLLQKPSSPSSLPPTSASPNPPSKQKMKKKQQQMNDCGSYLQLRSRRLQKKPPIVVIR 120

Query: 121 HESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEEGDHTAEEEAAAAAEESV 180
              +R++Q   E C RNP+PR              +L  +  +G        + +  ESV
Sbjct: 121 STKRRKQQRRNETCGRNPNPR-------------SNLDSIRGDGSR------SDSVSESV 180

Query: 181 GKFDEIHASGSKNENIDLVIEEASFGENNLDFE-----SRERSTRESTPSSLIRNPDIIR 240
                    G   + I  + ++ +FG+N  D E     S  R+TRESTP SLIR P+I+ 
Sbjct: 181 -------VFGKDKDLISEINKDPTFGQNFFDLEEEHTQSFNRTTRESTPCSLIRRPEIMT 240

Query: 241 TPSSTTRPTSSMIETNRR--NLYSSNRHIPTASEMDEFFALAEEKQQRHFIEKYNFDPVN 260
           TP S+T+    + E+N+R  +L  S+R  PT  EMDEFF+ AEE+QQ+ FIEKYNFDPVN
Sbjct: 241 TPGSSTKLNICVSESNQREDSLSRSHRRRPTTPEMDEFFSGAEEEQQKQFIEKYNFDPVN 287

[Close]

BLAST of CmoCh17G001130 vs. ExPASy Swiss-Prot
Match: Q283L0 (Cyclin-dependent kinase inhibitor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=KRP5 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.5e-35
Identity = 111/267 (41.57%), Postives = 143/267 (53.56%), Query Frame = 0


Query: 1   MGKYMRKTKSLGEVAVMEVSQSSLGVLTRAKTLALRRLQQSPTP------SPSPSPVASG 60
           MGKYMRK K  GEVAVMEV  + LGV TR++TLAL+R   S  P       P     A  
Sbjct: 1   MGKYMRKGKVSGEVAVMEVGGALLGVRTRSRTLALQRTTSSQKPPEKGEGDPGAGAGAGA 60

Query: 61  SYLQLRSRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVN 120
            YL+LRSRRLEKPP               KE   R  +   ++   PA P+         
Sbjct: 61  EYLELRSRRLEKPP-------PHTPPAKEKETARRASAAAAAAVRMPAAPQ--------- 120

Query: 121 EEGDHTAEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASFGEN--NLDFESRERST 180
                        AAEE   +                   E SFG+N  +LD ++ ERST
Sbjct: 121 -------------AAEEFEAEV------------------EVSFGDNVLDLDGDAMERST 180

Query: 181 RESTPSSLIRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRHIPTASEMDEFFALAEEKQ 240
           RE+TP SLIR+ ++I TP STT+ T++ I + RR   S  R++P++ EM+EFFA AE++Q
Sbjct: 181 RETTPCSLIRSSEMISTPGSTTK-TNTSISSRRRMETSVCRYVPSSLEMEEFFAAAEQQQ 219

Query: 241 QRHFIEKYNFDPVNDTPLPGRYEWEKL 260
            + F E+YNF PVND PLPGRYEW +L
Sbjct: 241 HQAFRERYNFCPVNDCPLPGRYEWTRL 219

[Close]

BLAST of CmoCh17G001130 vs. ExPASy Swiss-Prot
Match: Q9FKB5 (Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=KRP3 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.0e-33
Identity = 111/265 (41.89%), Postives = 145/265 (54.72%), Query Frame = 0


Query: 1   MGKYMRKTKSLGEVAVMEVSQS---SLGVLTR-AKTLALRRLQQSPTPSPSPSPVASGSY 60
           MGKYM+K+K  G+++VMEVS++   S GV TR AKTLAL+RL  S   S  P+   S  Y
Sbjct: 1   MGKYMKKSKITGDISVMEVSKATAPSPGVRTRAAKTLALKRLNSSAADSALPND--SSCY 60

Query: 61  LQLRSRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEE 120
           LQLRSRRLEKP                            SS + P  P       RV+  
Sbjct: 61  LQLRSRRLEKP----------------------------SSLIEPKQPP------RVHRS 120

Query: 121 GDHTAEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASFGENNLDFESRERSTREST 180
           G    +E  + +  +SV       +S       + V  + S GEN+L FESR  STREST
Sbjct: 121 G---IKESGSRSRVDSVNSVPVAQSSNEDECFDNFVSVQVSCGENSLGFESR-HSTREST 180

Query: 181 PSSLIRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRHIPTASEMDEFFALAEEKQQRHF 240
           P + + + +I+ TP S+TR   SM    +      +  IPT SEM+EFFA AE++QQR F
Sbjct: 181 PCNFVEDMEIMVTPGSSTR---SMCRATKEYTREQDNVIPTTSEMEEFFAYAEQQQQRLF 222

Query: 241 IEKYNFDPVNDTPLPGRYEWEKLQP 262
           +EKYNFD VND PL GRYEW +++P
Sbjct: 241 MEKYNFDIVNDIPLSGRYEWVQVKP 222

[Close]

BLAST of CmoCh17G001130 vs. ExPASy Swiss-Prot
Match: Q7XDH8 (Cyclin-dependent kinase inhibitor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=KRP4 PE=2 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 4.5e-29
Identity = 106/267 (39.70%), Postives = 139/267 (52.06%), Query Frame = 0


Query: 1   MGKYMRKTKSL--GEV---AVMEVSQSSLGVLTRAKTLALRRLQQSPTPSPSPSPVASGS 60
           MGKYMRK K +  GEV   AVME++ + LGV TRA++LAL++ Q              G 
Sbjct: 1   MGKYMRKAKVVVSGEVVAAAVMELAAAPLGVRTRARSLALQKRQ-------------GGE 60

Query: 61  YLQLRSRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNE 120
           YL+LRSRRLEK P                      P P       P  P +  +      
Sbjct: 61  YLELRSRRLEKLP----------------------PPP-------PPPPRRRATAAAA-- 120

Query: 121 EGDHTAEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASF-GENNLDFESRERSTRE 180
               TA+  AA +AE                        E SF GEN L+ E+ ER+TRE
Sbjct: 121 ----TADATAAESAE-----------------------AEVSFGGENVLELEAMERNTRE 180

Query: 181 STPSSLIRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRH--IPTASEMDEFFALAEEKQ 240
           +TP SLIR+PD I TP STTR + S   ++   + +  RH  IP ++E++ FFA  E++Q
Sbjct: 181 TTPCSLIRDPDTISTPGSTTRRSHS---SSHCKVQTPVRHNIIPASAELEAFFAAEEQRQ 193

Query: 241 QRHFIEKYNFDPVNDTPLPGRYEWEKL 260
           ++ FI+KYNFDPVND PLPGR+EW KL
Sbjct: 241 RQAFIDKYNFDPVNDCPLPGRFEWVKL 193

[Close]

BLAST of CmoCh17G001130 vs. ExPASy Swiss-Prot
Match: Q9LRY0 (Cyclin-dependent kinase inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=KRP5 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.0e-18
Identity = 87/265 (32.83%), Postives = 121/265 (45.66%), Query Frame = 0


Query: 1   MGKYMRKTKSLGEVAVMEVSQ-SSLGVLTR---AKTLALRRLQQSPTPSPSPSPVASGSY 60
           MGKY++K+K  G V+V + S   +LG  TR   AK LAL RL+     +       S +Y
Sbjct: 1   MGKYIKKSKVAGAVSVKDKSHPPALGFRTRAAAAKNLALHRLRSHSDEAD------SFNY 60

Query: 61  LQLRSRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEE 120
           LQLRSRRL K P++ +  + ++Q+  P     +  +PR SS      P K +       E
Sbjct: 61  LQLRSRRLVKLPLLTNTRKQQKQQLIPSVNQCQTKNPRASSG-----PAKKL-------E 120

Query: 121 GDHTAEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASFGENNLDFESRERSTREST 180
            D T EE  A    E + + D                   +FG+   D ES  RS     
Sbjct: 121 PDTTTEE--ACGDNERISRSD------------------CNFGDKGFDLESENRS----- 180

Query: 181 PSSLIRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRHIPTASEMDEFFALAEEKQQRHF 240
                                          + S ++ I   SE+++FFA AE++QQR F
Sbjct: 181 -------------------------------MISDSKSI--QSEIEDFFASAEQQQQRFF 189

Query: 241 IEKYNFDPVNDTPLPGRYEWEKLQP 262
           I+KYNFD V+D PLPGRYEW K+ P
Sbjct: 241 IQKYNFDIVSDNPLPGRYEWVKVMP 189

[Close]

BLAST of CmoCh17G001130 vs. ExPASy TrEMBL
Match: A0A6J1H4X5 (cyclin-dependent kinase inhibitor 5 OS=Cucurbita moschata OX=3662 GN=LOC111460427 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 8.8e-137
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MGKYMRKTKSLGEVAVMEVSQSSLGVLTRAKTLALRRLQQSPTPSPSPSPVASGSYLQLR 60
           MGKYMRKTKSLGEVAVMEVSQSSLGVLTRAKTLALRRLQQSPTPSPSPSPVASGSYLQLR
Sbjct: 1   MGKYMRKTKSLGEVAVMEVSQSSLGVLTRAKTLALRRLQQSPTPSPSPSPVASGSYLQLR 60

Query: 61  SRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEEGDHT 120
           SRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEEGDHT
Sbjct: 61  SRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEEGDHT 120

Query: 121 AEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASFGENNLDFESRERSTRESTPSSL 180
           AEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASFGENNLDFESRERSTRESTPSSL
Sbjct: 121 AEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASFGENNLDFESRERSTRESTPSSL 180

Query: 181 IRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRHIPTASEMDEFFALAEEKQQRHFIEKY 240
           IRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRHIPTASEMDEFFALAEEKQQRHFIEKY
Sbjct: 181 IRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRHIPTASEMDEFFALAEEKQQRHFIEKY 240

Query: 241 NFDPVNDTPLPGRYEWEKLQP 262
           NFDPVNDTPLPGRYEWEKLQP
Sbjct: 241 NFDPVNDTPLPGRYEWEKLQP 261

[Close]

BLAST of CmoCh17G001130 vs. ExPASy TrEMBL
Match: A0A6J1L513 (cyclin-dependent kinase inhibitor 5 OS=Cucurbita maxima OX=3661 GN=LOC111499197 PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.7e-135
Identity = 259/261 (99.23%), Postives = 259/261 (99.23%), Query Frame = 0


Query: 1   MGKYMRKTKSLGEVAVMEVSQSSLGVLTRAKTLALRRLQQSPTPSPSPSPVASGSYLQLR 60
           MGKYMRKTKSLGEVAVMEVSQSSLGVLTRAKTLALRRLQQSPTPSPSPSPVASGSYLQLR
Sbjct: 1   MGKYMRKTKSLGEVAVMEVSQSSLGVLTRAKTLALRRLQQSPTPSPSPSPVASGSYLQLR 60

Query: 61  SRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEEGDHT 120
           SRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEEGDHT
Sbjct: 61  SRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEEGDHT 120

Query: 121 AEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASFGENNLDFESRERSTRESTPSSL 180
           AEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASFGENNLDFESRERSTRESTPSSL
Sbjct: 121 AEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASFGENNLDFESRERSTRESTPSSL 180

Query: 181 IRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRHIPTASEMDEFFALAEEKQQRHFIEKY 240
           IRNPDIIRTPSSTTRPTSSMIE NRRNLYSSNRHIPTASEMDEFFALAEEKQQRHFIEKY
Sbjct: 181 IRNPDIIRTPSSTTRPTSSMIEANRRNLYSSNRHIPTASEMDEFFALAEEKQQRHFIEKY 240

Query: 241 NFDPVNDTPLPGRYEWEKLQP 262
           NFDPV DTPLPGRYEWEKLQP
Sbjct: 241 NFDPVKDTPLPGRYEWEKLQP 261

[Close]

BLAST of CmoCh17G001130 vs. ExPASy TrEMBL
Match: A0A0A0LK94 (CDI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G138190 PE=3 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.9e-115
Identity = 230/265 (86.79%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 1   MGKYMRKTKSLGEVAVMEVSQSSLGVLTRAKTLALRRLQQSPTPSPSP----SPVASGSY 60
           MGKYMRKTKSLGEVAVME+SQSSLGVLTRAKTLALRRLQQSPTPSPSP    SPVASGSY
Sbjct: 1   MGKYMRKTKSLGEVAVMELSQSSLGVLTRAKTLALRRLQQSPTPSPSPASPASPVASGSY 60

Query: 61  LQLRSRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEE 120
           LQLR+RRLEKP VVFS HESKRQK +P+E CT NPSPRVSSSL+ AMPE+SVSLGRVNEE
Sbjct: 61  LQLRNRRLEKPTVVFSAHESKRQKPTPREACTTNPSPRVSSSLKLAMPERSVSLGRVNEE 120

Query: 121 GDHTAEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASFGENNLDFESRERSTREST 180
           GDHTAE+     AE+SVGKFDEIHA  SKNENIDLVIEEASFGEN LDFESRERSTREST
Sbjct: 121 GDHTAED----VAEKSVGKFDEIHAGESKNENIDLVIEEASFGENILDFESRERSTREST 180

Query: 181 PSSLIRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRHIPTASEMDEFFALAEEKQQRHF 240
           PSSLIRNPD IRTPSSTTRPT+S +ETN RN YSSNR IPTA EMDEFFALAEEKQQRHF
Sbjct: 181 PSSLIRNPDTIRTPSSTTRPTTSAVETNHRNPYSSNRPIPTAREMDEFFALAEEKQQRHF 240

Query: 241 IEKYNFDPVNDTPLPGRYEWEKLQP 262
           IEKYNFDPV DTPLPGRYEWEKLQP
Sbjct: 241 IEKYNFDPVKDTPLPGRYEWEKLQP 261

[Close]

BLAST of CmoCh17G001130 vs. ExPASy TrEMBL
Match: A0A5A7SS66 (Cyclin-dependent kinase inhibitor 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00870 PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.3e-115
Identity = 230/267 (86.14%), Postives = 240/267 (89.89%), Query Frame = 0


Query: 1   MGKYMRKTKSLGEVAVMEVSQSSLGVLTRAKTLALRRLQQSPTPSPSP----SPVASGSY 60
           MGKYMRKTKSLGEVAVME+SQSSLGVLTRAKTLALRRLQQSP+PSPSP    SPVASGSY
Sbjct: 1   MGKYMRKTKSLGEVAVMELSQSSLGVLTRAKTLALRRLQQSPSPSPSPASPASPVASGSY 60

Query: 61  LQLRSRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEE 120
           LQLR+RRLEKPP+VFSGHESKRQK SP+E CTRNPSPRVSSSLRPAMPE+SVSLGRVNEE
Sbjct: 61  LQLRNRRLEKPPLVFSGHESKRQKPSPREACTRNPSPRVSSSLRPAMPERSVSLGRVNEE 120

Query: 121 GDHTAEEEAAAAAEESVGKFDEIHA--SGSKNENIDLVIEEASFGENNLDFESRERSTRE 180
           GDHTAE+     AE+S+ KFDEIH     SKNENIDLVIEEASFGEN LDFESRERSTRE
Sbjct: 121 GDHTAED----VAEKSLVKFDEIHGGMGESKNENIDLVIEEASFGENILDFESRERSTRE 180

Query: 181 STPSSLIRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRHIPTASEMDEFFALAEEKQQR 240
           STPSSLIRNPD IRTP STTRPT+S IETN RN YSSNRHIPT  EMDEFFALAEEKQQR
Sbjct: 181 STPSSLIRNPDTIRTPGSTTRPTTSAIETNHRNPYSSNRHIPTTREMDEFFALAEEKQQR 240

Query: 241 HFIEKYNFDPVNDTPLPGRYEWEKLQP 262
           HFIEKYNFDPV D PLPGRYEWEKLQP
Sbjct: 241 HFIEKYNFDPVKDMPLPGRYEWEKLQP 263

[Close]

BLAST of CmoCh17G001130 vs. ExPASy TrEMBL
Match: A0A1S4E283 (cyclin-dependent kinase inhibitor 5-like OS=Cucumis melo OX=3656 GN=LOC103496975 PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.3e-115
Identity = 230/267 (86.14%), Postives = 240/267 (89.89%), Query Frame = 0


Query: 1   MGKYMRKTKSLGEVAVMEVSQSSLGVLTRAKTLALRRLQQSPTPSPSP----SPVASGSY 60
           MGKYMRKTKSLGEVAVME+SQSSLGVLTRAKTLALRRLQQSP+PSPSP    SPVASGSY
Sbjct: 1   MGKYMRKTKSLGEVAVMELSQSSLGVLTRAKTLALRRLQQSPSPSPSPASPASPVASGSY 60

Query: 61  LQLRSRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEE 120
           LQLR+RRLEKPP+VFSGHESKRQK SP+E CTRNPSPRVSSSLRPAMPE+SVSLGRVNEE
Sbjct: 61  LQLRNRRLEKPPLVFSGHESKRQKPSPREACTRNPSPRVSSSLRPAMPERSVSLGRVNEE 120

Query: 121 GDHTAEEEAAAAAEESVGKFDEIHA--SGSKNENIDLVIEEASFGENNLDFESRERSTRE 180
           GDHTAE+     AE+S+ KFDEIH     SKNENIDLVIEEASFGEN LDFESRERSTRE
Sbjct: 121 GDHTAED----VAEKSLVKFDEIHGGMGESKNENIDLVIEEASFGENILDFESRERSTRE 180

Query: 181 STPSSLIRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRHIPTASEMDEFFALAEEKQQR 240
           STPSSLIRNPD IRTP STTRPT+S IETN RN YSSNRHIPT  EMDEFFALAEEKQQR
Sbjct: 181 STPSSLIRNPDTIRTPGSTTRPTTSAIETNHRNPYSSNRHIPTTREMDEFFALAEEKQQR 240

Query: 241 HFIEKYNFDPVNDTPLPGRYEWEKLQP 262
           HFIEKYNFDPV D PLPGRYEWEKLQP
Sbjct: 241 HFIEKYNFDPVKDMPLPGRYEWEKLQP 263

[Close]

BLAST of CmoCh17G001130 vs. TAIR 10
Match: AT2G32710.2 (Cyclin-dependent kinase inhibitor family protein )

HSP 1 Score: 159.5 bits (402), Expect = 3.8e-39
Identity = 123/310 (39.68%), Postives = 167/310 (53.87%), Query Frame = 0


Query: 1   MGKYMRKTKSLG-----------------EVAVMEV----SQSSLGVLTRAKTLALRRLQ 60
           MGKY+RK+K  G                  +A+M+V    S SSLGVLTRAK+LAL++ Q
Sbjct: 1   MGKYIRKSKIDGAGAGAGGGGGGGGGGESSIALMDVVSPSSSSSLGVLTRAKSLALQQQQ 60

Query: 61  QS------------PTPSPSPSPVAS-------------GSYLQLRSRRLE-KPPVVFSG 120
           Q             P  S SP+P +              GSYLQLRSRRL+ KPP+V   
Sbjct: 61  QRCLLQKPSSPSSLPPTSASPNPPSKQKMKKKQQQMNDCGSYLQLRSRRLQKKPPIVVIR 120

Query: 121 HESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEEGDHTAEEEAAAAAEESV 180
              +R++Q   E C RNP+PR              +L  +  +G        + +  ESV
Sbjct: 121 STKRRKQQRRNETCGRNPNPR-------------SNLDSIRGDGSR------SDSVSESV 180

Query: 181 GKFDEIHASGSKNENIDLVIEEASFGENNLDFESR--ERSTRESTPSSLIRNPDIIRTPS 240
                    G   + I  + ++ +FG+N  D E    +R+TRESTP SLIR P+I+ TP 
Sbjct: 181 -------VFGKDKDLISEINKDPTFGQNFFDLEEEHTQRTTRESTPCSLIRRPEIMTTPG 240

Query: 241 STTRPTSSMIETNRR--NLYSSNRHIPTASEMDEFFALAEEKQQRHFIEKYNFDPVNDTP 260
           S+T+    + E+N+R  +L  S+R  PT  EMDEFF+ AEE+QQ+ FIEKYNFDPVN+ P
Sbjct: 241 SSTKLNICVSESNQREDSLSRSHRRRPTTPEMDEFFSGAEEEQQKQFIEKYNFDPVNEQP 284

[Close]

BLAST of CmoCh17G001130 vs. TAIR 10
Match: AT2G32710.1 (Cyclin-dependent kinase inhibitor family protein )

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-38
Identity = 124/313 (39.62%), Postives = 167/313 (53.35%), Query Frame = 0


Query: 1   MGKYMRKTKSLG-----------------EVAVMEV----SQSSLGVLTRAKTLALRRLQ 60
           MGKY+RK+K  G                  +A+M+V    S SSLGVLTRAK+LAL++ Q
Sbjct: 1   MGKYIRKSKIDGAGAGAGGGGGGGGGGESSIALMDVVSPSSSSSLGVLTRAKSLALQQQQ 60

Query: 61  QS------------PTPSPSPSPVAS-------------GSYLQLRSRRLE-KPPVVFSG 120
           Q             P  S SP+P +              GSYLQLRSRRL+ KPP+V   
Sbjct: 61  QRCLLQKPSSPSSLPPTSASPNPPSKQKMKKKQQQMNDCGSYLQLRSRRLQKKPPIVVIR 120

Query: 121 HESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEEGDHTAEEEAAAAAEESV 180
              +R++Q   E C RNP+PR              +L  +  +G        + +  ESV
Sbjct: 121 STKRRKQQRRNETCGRNPNPR-------------SNLDSIRGDGSR------SDSVSESV 180

Query: 181 GKFDEIHASGSKNENIDLVIEEASFGENNLDFE-----SRERSTRESTPSSLIRNPDIIR 240
                    G   + I  + ++ +FG+N  D E     S  R+TRESTP SLIR P+I+ 
Sbjct: 181 -------VFGKDKDLISEINKDPTFGQNFFDLEEEHTQSFNRTTRESTPCSLIRRPEIMT 240

Query: 241 TPSSTTRPTSSMIETNRR--NLYSSNRHIPTASEMDEFFALAEEKQQRHFIEKYNFDPVN 260
           TP S+T+    + E+N+R  +L  S+R  PT  EMDEFF+ AEE+QQ+ FIEKYNFDPVN
Sbjct: 241 TPGSSTKLNICVSESNQREDSLSRSHRRRPTTPEMDEFFSGAEEEQQKQFIEKYNFDPVN 287

[Close]

BLAST of CmoCh17G001130 vs. TAIR 10
Match: AT5G48820.1 (inhibitor/interactor with cyclin-dependent kinase )

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-34
Identity = 111/265 (41.89%), Postives = 145/265 (54.72%), Query Frame = 0


Query: 1   MGKYMRKTKSLGEVAVMEVSQS---SLGVLTR-AKTLALRRLQQSPTPSPSPSPVASGSY 60
           MGKYM+K+K  G+++VMEVS++   S GV TR AKTLAL+RL  S   S  P+   S  Y
Sbjct: 1   MGKYMKKSKITGDISVMEVSKATAPSPGVRTRAAKTLALKRLNSSAADSALPND--SSCY 60

Query: 61  LQLRSRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEE 120
           LQLRSRRLEKP                            SS + P  P       RV+  
Sbjct: 61  LQLRSRRLEKP----------------------------SSLIEPKQPP------RVHRS 120

Query: 121 GDHTAEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASFGENNLDFESRERSTREST 180
           G    +E  + +  +SV       +S       + V  + S GEN+L FESR  STREST
Sbjct: 121 G---IKESGSRSRVDSVNSVPVAQSSNEDECFDNFVSVQVSCGENSLGFESR-HSTREST 180

Query: 181 PSSLIRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRHIPTASEMDEFFALAEEKQQRHF 240
           P + + + +I+ TP S+TR   SM    +      +  IPT SEM+EFFA AE++QQR F
Sbjct: 181 PCNFVEDMEIMVTPGSSTR---SMCRATKEYTREQDNVIPTTSEMEEFFAYAEQQQQRLF 222

Query: 241 IEKYNFDPVNDTPLPGRYEWEKLQP 262
           +EKYNFD VND PL GRYEW +++P
Sbjct: 241 MEKYNFDIVNDIPLSGRYEWVQVKP 222

[Close]

BLAST of CmoCh17G001130 vs. TAIR 10
Match: AT5G48820.2 (inhibitor/interactor with cyclin-dependent kinase )

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-32
Identity = 111/282 (39.36%), Postives = 145/282 (51.42%), Query Frame = 0


Query: 1   MGKYMRKTKSLGEVAVMEVSQS---SLGVLTR-AKTLALRRLQQSPTPSPSPSPVASGSY 60
           MGKYM+K+K  G+++VMEVS++   S GV TR AKTLAL+RL  S   S  P+   S  Y
Sbjct: 1   MGKYMKKSKITGDISVMEVSKATAPSPGVRTRAAKTLALKRLNSSAADSALPND--SSCY 60

Query: 61  LQLRSRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEE 120
           LQLRSRRLEKP                            SS + P  P       RV+  
Sbjct: 61  LQLRSRRLEKP----------------------------SSLIEPKQPP------RVHRS 120

Query: 121 GDHTAEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASFGENNLDFESRER------ 180
           G    +E  + +  +SV       +S       + V  + S GEN+L FESR R      
Sbjct: 121 G---IKESGSRSRVDSVNSVPVAQSSNEDECFDNFVSVQVSCGENSLGFESRHRFVVFFF 180

Query: 181 -----------STRESTPSSLIRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRHIPTAS 240
                       TRESTP + + + +I+ TP S+TR   SM    +      +  IPT S
Sbjct: 181 FFLFFMFPLLVCTRESTPCNFVEDMEIMVTPGSSTR---SMCRATKEYTREQDNVIPTTS 240

Query: 241 EMDEFFALAEEKQQRHFIEKYNFDPVNDTPLPGRYEWEKLQP 262
           EM+EFFA AE++QQR F+EKYNFD VND PL GRYEW +++P
Sbjct: 241 EMEEFFAYAEQQQQRLFMEKYNFDIVNDIPLSGRYEWVQVKP 240

[Close]

BLAST of CmoCh17G001130 vs. TAIR 10
Match: AT3G24810.1 (Cyclin-dependent kinase inhibitor family protein )

HSP 1 Score: 92.4 bits (228), Expect = 5.7e-19
Identity = 87/265 (32.83%), Postives = 121/265 (45.66%), Query Frame = 0


Query: 1   MGKYMRKTKSLGEVAVMEVSQ-SSLGVLTR---AKTLALRRLQQSPTPSPSPSPVASGSY 60
           MGKY++K+K  G V+V + S   +LG  TR   AK LAL RL+     +       S +Y
Sbjct: 1   MGKYIKKSKVAGAVSVKDKSHPPALGFRTRAAAAKNLALHRLRSHSDEAD------SFNY 60

Query: 61  LQLRSRRLEKPPVVFSGHESKRQKQSPKEGCTRNPSPRVSSSLRPAMPEKSVSLGRVNEE 120
           LQLRSRRL K P++ +  + ++Q+  P     +  +PR SS      P K +       E
Sbjct: 61  LQLRSRRLVKLPLLTNTRKQQKQQLIPSVNQCQTKNPRASSG-----PAKKL-------E 120

Query: 121 GDHTAEEEAAAAAEESVGKFDEIHASGSKNENIDLVIEEASFGENNLDFESRERSTREST 180
            D T EE  A    E + + D                   +FG+   D ES  RS     
Sbjct: 121 PDTTTEE--ACGDNERISRSD------------------CNFGDKGFDLESENRS----- 180

Query: 181 PSSLIRNPDIIRTPSSTTRPTSSMIETNRRNLYSSNRHIPTASEMDEFFALAEEKQQRHF 240
                                          + S ++ I   SE+++FFA AE++QQR F
Sbjct: 181 -------------------------------MISDSKSI--QSEIEDFFASAEQQQQRFF 189

Query: 241 IEKYNFDPVNDTPLPGRYEWEKLQP 262
           I+KYNFD V+D PLPGRYEW K+ P
Sbjct: 241 IQKYNFDIVSDNPLPGRYEWVKVMP 189

The following BLAST results are available for this feature:

BLAST of CmoCh17G001130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYJ3	1.5e-37	39.62	Cyclin-dependent kinase inhibitor 4 OS=Arabidopsis thaliana OX=3702 GN=KRP4 PE=1...	[more]
Q283L0	5.5e-35	41.57	Cyclin-dependent kinase inhibitor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q9FKB5	3.0e-33	41.89	Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=KRP3 PE=1...	[more]
Q7XDH8	4.5e-29	39.70	Cyclin-dependent kinase inhibitor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q9LRY0	8.0e-18	32.83	Cyclin-dependent kinase inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=KRP5 PE=1...	[more]

BLAST of CmoCh17G001130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H4X5	8.8e-137	100.00	cyclin-dependent kinase inhibitor 5 OS=Cucurbita moschata OX=3662 GN=LOC11146042...	[more]
A0A6J1L513	1.7e-135	99.23	cyclin-dependent kinase inhibitor 5 OS=Cucurbita maxima OX=3661 GN=LOC111499197 ...	[more]
A0A0A0LK94	1.9e-115	86.79	CDI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G138190 PE=3 SV...	[more]
A0A5A7SS66	4.3e-115	86.14	Cyclin-dependent kinase inhibitor 5-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S4E283	4.3e-115	86.14	cyclin-dependent kinase inhibitor 5-like OS=Cucumis melo OX=3656 GN=LOC103496975...	[more]

BLAST of CmoCh17G001130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32710.2	3.8e-39	39.68	Cyclin-dependent kinase inhibitor family protein	[more]
AT2G32710.1	1.1e-38	39.62	Cyclin-dependent kinase inhibitor family protein	[more]
AT5G48820.1	2.1e-34	41.89	inhibitor/interactor with cyclin-dependent kinase	[more]
AT5G48820.2	2.0e-32	39.36	inhibitor/interactor with cyclin-dependent kinase	[more]
AT3G24810.1	5.7e-19	32.83	Cyclin-dependent kinase inhibitor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044275	Cyclin-dependent kinase inhibitor, plant	PIRSF	PIRSF017811	CKI_KRP_plant	coord: 140..261 e-value: 1.5E-37 score: 127.9 coord: 1..152 e-value: 1.5E-8 score: 33.3
IPR044275	Cyclin-dependent kinase inhibitor, plant	PANTHER	PTHR46776	CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED	coord: 1..259
IPR044898	Cyclin-dependent kinase inhibitor domain superfamily	GENE3D	4.10.365.10	p27	coord: 202..261 e-value: 4.8E-12 score: 47.6
IPR003175	Cyclin-dependent kinase inhibitor domain	PFAM	PF02234	CDI	coord: 212..259 e-value: 2.4E-19 score: 69.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..84
None	No IPR available	PANTHER	PTHR46776:SF3	CYCLIN-DEPENDENT KINASE INHIBITOR 4	coord: 1..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G001130.1	CmoCh17G001130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process	GO:0051726	regulation of cell cycle
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity