Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCCAACATTTGTGACGTGAATCATCTCGATTCCGATGTTCTTCTACCGCCAAGAAAGCGCCTTCTTGCTGGCTTGAGAAAGCAAGGTGCCGATGGTGATGGTACTTTTAATCTGCCACCAGTTGCCTCCTCCTCTTGTTCTCCTCCTCCCTCTCCTTCCTATGGCTTCACATCTATTGAGTTCAATATGCGGCTTAACAATCTGTTTAGTGCTCATTCAAATACTAACCTATCATCTGAAGAGATAGTGGAGGCCTCAAGATCAGCCGCAGCTGCAGCTGTGAAGGCTGCGGAGGCTGCCAGGGCAGCAGCTGAAGAGAAGGCGGCGATTGCAGCAAGGGCTGTTGCGGCTGCAAAGAGTGCCATGGACTTGGTTGCCACCATTTCTGAAGAAGCAGCCTATAAAGAAATAAACCTGAGAAAGAACAAGCTGAAGAAACATGTCCCAGTTCAGCTTCTATACACAAAATATCAACCTCTTGAGAATACCAAGACAGATGAAGAGTTAGCTCGCAAATTGCATCGAGCCATAAATAGCTCCCCGAGAATTTTGAAGAATTCATCTGGTTCTGATGCTAGAGGCCACAGACATAAGAGGTTCAAAGGTTCACCTGGTTCGGAGAAAACTAAGGTTTCCAACTGTGGCATCTCACAGGAGTTGGACCCTACTCCCAGGTGCAATGGGCATGCTAGAACCAGTGAGGCTGACTCTGAGGGCAGCGTTCAGGAAGTACGCAAGCTCAAAGCTGATGAGAAGAACAATCAGTCCGAGATGGATAATGGAGAAGCAGAGACAAGTCAGAAGGAGAAAACGTGCGACAATATTAGTGTCGCTGTTAAAAAGAGGGGAAGAGTAAAGCTTAGAAAACTGCCCTTGAGTATTTGTTCTTTCAGGGATCAGACAACTCTCAAGGAAGACATGAATGACGGAAGTTCCCCAATGTCGAGTGTGCAAAGCCCGACATCTGAAAATGTTATTTTACATTCTGTAGATAGCCCGACCGAAGGCGTGATGGCAATAGAACCCGCATCAGTATGGAAATGCCAGGAGTTTAATCCTCCTCTTTCTGTCAAACAAAATAAAGTTATGCAGTCATGA
mRNA sequence
ATGGAGGCCAACATTTGTGACGTGAATCATCTCGATTCCGATGTTCTTCTACCGCCAAGAAAGCGCCTTCTTGCTGGCTTGAGAAAGCAAGGTGCCGATGGTGATGGTACTTTTAATCTGCCACCAGTTGCCTCCTCCTCTTGTTCTCCTCCTCCCTCTCCTTCCTATGGCTTCACATCTATTGAGTTCAATATGCGGCTTAACAATCTGTTTAGTGCTCATTCAAATACTAACCTATCATCTGAAGAGATAGTGGAGGCCTCAAGATCAGCCGCAGCTGCAGCTGTGAAGGCTGCGGAGGCTGCCAGGGCAGCAGCTGAAGAGAAGGCGGCGATTGCAGCAAGGGCTGTTGCGGCTGCAAAGAGTGCCATGGACTTGGTTGCCACCATTTCTGAAGAAGCAGCCTATAAAGAAATAAACCTGAGAAAGAACAAGCTGAAGAAACATGTCCCAGTTCAGCTTCTATACACAAAATATCAACCTCTTGAGAATACCAAGACAGATGAAGAGTTAGCTCGCAAATTGCATCGAGCCATAAATAGCTCCCCGAGAATTTTGAAGAATTCATCTGGTTCTGATGCTAGAGGCCACAGACATAAGAGGTTCAAAGGTTCACCTGGTTCGGAGAAAACTAAGGTTTCCAACTGTGGCATCTCACAGGAGTTGGACCCTACTCCCAGGTGCAATGGGCATGCTAGAACCAGTGAGGCTGACTCTGAGGGCAGCGTTCAGGAAGTACGCAAGCTCAAAGCTGATGAGAAGAACAATCAGTCCGAGATGGATAATGGAGAAGCAGAGACAAGTCAGAAGGAGAAAACGTGCGACAATATTAGTGTCGCTGTTAAAAAGAGGGGAAGAGTAAAGCTTAGAAAACTGCCCTTGAGTATTTGTTCTTTCAGGGATCAGACAACTCTCAAGGAAGACATGAATGACGGAAGTTCCCCAATGTCGAGTGTGCAAAGCCCGACATCTGAAAATGTTATTTTACATTCTGTAGATAGCCCGACCGAAGGCGTGATGGCAATAGAACCCGCATCAGTATGGAAATGCCAGGAGTTTAATCCTCCTCTTTCTGTCAAACAAAATAAAGTTATGCAGTCATGA
Coding sequence (CDS)
ATGGAGGCCAACATTTGTGACGTGAATCATCTCGATTCCGATGTTCTTCTACCGCCAAGAAAGCGCCTTCTTGCTGGCTTGAGAAAGCAAGGTGCCGATGGTGATGGTACTTTTAATCTGCCACCAGTTGCCTCCTCCTCTTGTTCTCCTCCTCCCTCTCCTTCCTATGGCTTCACATCTATTGAGTTCAATATGCGGCTTAACAATCTGTTTAGTGCTCATTCAAATACTAACCTATCATCTGAAGAGATAGTGGAGGCCTCAAGATCAGCCGCAGCTGCAGCTGTGAAGGCTGCGGAGGCTGCCAGGGCAGCAGCTGAAGAGAAGGCGGCGATTGCAGCAAGGGCTGTTGCGGCTGCAAAGAGTGCCATGGACTTGGTTGCCACCATTTCTGAAGAAGCAGCCTATAAAGAAATAAACCTGAGAAAGAACAAGCTGAAGAAACATGTCCCAGTTCAGCTTCTATACACAAAATATCAACCTCTTGAGAATACCAAGACAGATGAAGAGTTAGCTCGCAAATTGCATCGAGCCATAAATAGCTCCCCGAGAATTTTGAAGAATTCATCTGGTTCTGATGCTAGAGGCCACAGACATAAGAGGTTCAAAGGTTCACCTGGTTCGGAGAAAACTAAGGTTTCCAACTGTGGCATCTCACAGGAGTTGGACCCTACTCCCAGGTGCAATGGGCATGCTAGAACCAGTGAGGCTGACTCTGAGGGCAGCGTTCAGGAAGTACGCAAGCTCAAAGCTGATGAGAAGAACAATCAGTCCGAGATGGATAATGGAGAAGCAGAGACAAGTCAGAAGGAGAAAACGTGCGACAATATTAGTGTCGCTGTTAAAAAGAGGGGAAGAGTAAAGCTTAGAAAACTGCCCTTGAGTATTTGTTCTTTCAGGGATCAGACAACTCTCAAGGAAGACATGAATGACGGAAGTTCCCCAATGTCGAGTGTGCAAAGCCCGACATCTGAAAATGTTATTTTACATTCTGTAGATAGCCCGACCGAAGGCGTGATGGCAATAGAACCCGCATCAGTATGGAAATGCCAGGAGTTTAATCCTCCTCTTTCTGTCAAACAAAATAAAGTTATGCAGTCATGA
Protein sequence
MEANICDVNHLDSDVLLPPRKRLLAGLRKQGADGDGTFNLPPVASSSCSPPPSPSYGFTSIEFNMRLNNLFSAHSNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVAAAKSAMDLVATISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAINSSPRILKNSSGSDARGHRHKRFKGSPGSEKTKVSNCGISQELDPTPRCNGHARTSEADSEGSVQEVRKLKADEKNNQSEMDNGEAETSQKEKTCDNISVAVKKRGRVKLRKLPLSICSFRDQTTLKEDMNDGSSPMSSVQSPTSENVILHSVDSPTEGVMAIEPASVWKCQEFNPPLSVKQNKVMQS
Homology
BLAST of CmoCh16G013360 vs. ExPASy TrEMBL
Match:
A0A6J1E5V1 (uncharacterized protein LOC111430990 OS=Cucurbita moschata OX=3662 GN=LOC111430990 PE=4 SV=1)
HSP 1 Score: 684.5 bits (1765), Expect = 2.5e-193
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0
Query: 1 MEANICDVNHLDSDVLLPPRKRLLAGLRKQGADGDGTFNLPPVASSSCSPPPSPSYGFTS 60
MEANICDVNHLDSDVLLPPRKRLLAGLRKQGADGDGTFNLPPVASSSCSPPPSPSYGFTS
Sbjct: 1 MEANICDVNHLDSDVLLPPRKRLLAGLRKQGADGDGTFNLPPVASSSCSPPPSPSYGFTS 60
Query: 61 IEFNMRLNNLFSAHSNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVAAA 120
IEFNMRLNNLFSAHSNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVAAA
Sbjct: 61 IEFNMRLNNLFSAHSNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVAAA 120
Query: 121 KSAMDLVATISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAIN 180
KSAMDLVATISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAIN
Sbjct: 121 KSAMDLVATISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAIN 180
Query: 181 SSPRILKNSSGSDARGHRHKRFKGSPGSEKTKVSNCGISQELDPTPRCNGHARTSEADSE 240
SSPRILKNSSGSDARGHRHKRFKGSPGSEKTKVSNCGISQELDPTPRCNGHARTSEADSE
Sbjct: 181 SSPRILKNSSGSDARGHRHKRFKGSPGSEKTKVSNCGISQELDPTPRCNGHARTSEADSE 240
Query: 241 GSVQEVRKLKADEKNNQSEMDNGEAETSQKEKTCDNISVAVKKRGRVKLRKLPLSICSFR 300
GSVQEVRKLKADEKNNQSEMDNGEAETSQKEKTCDNISVAVKKRGRVKLRKLPLSICSFR
Sbjct: 241 GSVQEVRKLKADEKNNQSEMDNGEAETSQKEKTCDNISVAVKKRGRVKLRKLPLSICSFR 300
Query: 301 DQTTLKEDMNDGSSPMSSVQSPTSENVILHSVDSPTEGVMAIEPASVWKCQEFNPPLSVK 360
DQTTLKEDMNDGSSPMSSVQSPTSENVILHSVDSPTEGVMAIEPASVWKCQEFNPPLSVK
Sbjct: 301 DQTTLKEDMNDGSSPMSSVQSPTSENVILHSVDSPTEGVMAIEPASVWKCQEFNPPLSVK 360
Query: 361 QNKVMQS 368
QNKVMQS
Sbjct: 361 QNKVMQS 367
BLAST of CmoCh16G013360 vs. ExPASy TrEMBL
Match:
A0A6J1L152 (uncharacterized protein LOC111500210 OS=Cucurbita maxima OX=3661 GN=LOC111500210 PE=4 SV=1)
HSP 1 Score: 667.9 bits (1722), Expect = 2.4e-188
Identity = 360/368 (97.83%), Postives = 364/368 (98.91%), Query Frame = 0
Query: 1 MEANICDVNHLDSDVLLPPRKRLLAGLRKQGADGDGTFNLPPVASSSCSPPPSPSYGFTS 60
MEANICD NHLDSDVLLPPRKRLLAGLRKQGADGDGTFNLPPVASSSCSPPPSPSYGFTS
Sbjct: 1 MEANICDANHLDSDVLLPPRKRLLAGLRKQGADGDGTFNLPPVASSSCSPPPSPSYGFTS 60
Query: 61 IEFNMRLNNLFSAHSNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVAAA 120
IEFNMRLNNL SAHSNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVAAA
Sbjct: 61 IEFNMRLNNLLSAHSNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVAAA 120
Query: 121 KSAMDLVATISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAIN 180
KSAMDLVATISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAIN
Sbjct: 121 KSAMDLVATISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAIN 180
Query: 181 SSPRILKNSSGSDARGHRHKRFKGSPGSEKTKVSNCGISQELDPTPRCNGHARTSEADSE 240
SSPRILKNSSGSDARGHRHKRFKGSPGSEKTKVSNCGISQELDPTPRCNGHARTSEADSE
Sbjct: 181 SSPRILKNSSGSDARGHRHKRFKGSPGSEKTKVSNCGISQELDPTPRCNGHARTSEADSE 240
Query: 241 GSVQEVRKLKADEKNNQSEMDNGEAETSQKEKTCDNISVAVKKRGRVKLRKLPLSICSFR 300
GSVQEVRKLKAD+KNNQSEMDNGEAETSQKEKTCDNISVAVKKRGRVKL+KLPLSICSFR
Sbjct: 241 GSVQEVRKLKADKKNNQSEMDNGEAETSQKEKTCDNISVAVKKRGRVKLKKLPLSICSFR 300
Query: 301 DQTTLKEDMNDGSSPMSSVQSPT-SENVILHSVDSPTEGVMAIEPASVWKCQEFNPPLSV 360
DQTTLKEDMN+GSSP+SSVQSPT SENVILHSVDSPTEGVM IEPASVWKCQEFNPPLSV
Sbjct: 301 DQTTLKEDMNNGSSPISSVQSPTSSENVILHSVDSPTEGVMPIEPASVWKCQEFNPPLSV 360
Query: 361 KQNKVMQS 368
KQNKVMQS
Sbjct: 361 KQNKVMQS 368
BLAST of CmoCh16G013360 vs. ExPASy TrEMBL
Match:
A0A6J1DVF5 (uncharacterized protein LOC111024810 OS=Momordica charantia OX=3673 GN=LOC111024810 PE=4 SV=1)
HSP 1 Score: 570.5 bits (1469), Expect = 5.2e-159
Identity = 315/376 (83.78%), Postives = 336/376 (89.36%), Query Frame = 0
Query: 1 MEANICDVNHLDSDVLLPPRKRLLAGLRKQGADGDGTFNLPPVASSSCSPPPSPSYGFTS 60
MEANICDVNHLD+DVLLPPRKRLLAGLRKQGADGDGTFNLPPVAS SCSPPPSPSY TS
Sbjct: 1 MEANICDVNHLDADVLLPPRKRLLAGLRKQGADGDGTFNLPPVASPSCSPPPSPSYATTS 60
Query: 61 IEFNMRLNNLFSAHSNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVAAA 120
IEFN+RL+NL SAHSNTNLS EEIVEASRSAAAAAVKAA++ARAAAEEKAAIAA+AVAAA
Sbjct: 61 IEFNIRLSNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAQSARAAAEEKAAIAAKAVAAA 120
Query: 121 KSAMDLVATISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAIN 180
KSAMDLVA+ISEEAA KEINLRKNKLKKHVPVQLLYTKYQP+EN KTDEELARKLHRAIN
Sbjct: 121 KSAMDLVASISEEAACKEINLRKNKLKKHVPVQLLYTKYQPIENCKTDEELARKLHRAIN 180
Query: 181 SSPRILKNSSGSDARGHRHKRFKGSPGSEKTKVSNCGISQELDPTPRCNGHARTSEADSE 240
SSPRI KNSS D RG +HK+ K SPGSEKT+VSNC ISQELDPTP CNGHA+ SEA SE
Sbjct: 181 SSPRITKNSSSPDVRGQKHKKLKSSPGSEKTRVSNCDISQELDPTPSCNGHAKISEASSE 240
Query: 241 GSVQEVRKLKAD------EKNNQSEMDNGEAETSQKEKTCDNISVAVKKRGRVKLRKLPL 300
S +EV KLKAD EKN QS MDNGEAETS+KEKTCD+ISV VKKRGRVKL+KLPL
Sbjct: 241 CSFREVYKLKADEKTSKYEKNYQSRMDNGEAETSRKEKTCDDISVTVKKRGRVKLKKLPL 300
Query: 301 SICSFRDQTTLKEDMNDGSSPMSSVQ---SPTSENVILHSVDSPTEGVMAIEPASVWKCQ 360
SICSFRDQ TLKE+MN+GSSP+ +VQ SPTSENVILHSV SPTEGVM I+ SVWKCQ
Sbjct: 301 SICSFRDQATLKEEMNNGSSPILTVQKTGSPTSENVILHSVGSPTEGVMPIDSTSVWKCQ 360
Query: 361 EFNPPLSVKQNKVMQS 368
EFN PLSVKQNKVMQS
Sbjct: 361 EFNAPLSVKQNKVMQS 376
BLAST of CmoCh16G013360 vs. ExPASy TrEMBL
Match:
A0A6J1G7K8 (uncharacterized protein LOC111451593 OS=Cucurbita moschata OX=3662 GN=LOC111451593 PE=4 SV=1)
HSP 1 Score: 563.9 bits (1452), Expect = 4.8e-157
Identity = 312/379 (82.32%), Postives = 340/379 (89.71%), Query Frame = 0
Query: 1 MEANICDVNHLDSDVLLPPRKRLLAGLRKQGADGDGTFNLPPVASSSCSPPPSPSYGFTS 60
MEANICDVNHLDSDVLLPPRKRLLAGLRK+GADGDGTFN+PPVAS+SCSPPPSPSYGFTS
Sbjct: 1 MEANICDVNHLDSDVLLPPRKRLLAGLRKKGADGDGTFNVPPVASTSCSPPPSPSYGFTS 60
Query: 61 IEFNMRLNNLFSAHSNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVAAA 120
IEFN+RLNNL SAHSNTNLS EEIVEASRSAAAAAVKAAEAAR AAEEKAAIAA+AVAAA
Sbjct: 61 IEFNIRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARTAAEEKAAIAAKAVAAA 120
Query: 121 KSAMDLVATISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAIN 180
KSAMDLVA+ISEEAAYKEI RKNKLKKHVPVQ LYTKYQPLENT+TDEE+ARKLHRAIN
Sbjct: 121 KSAMDLVASISEEAAYKEIKQRKNKLKKHVPVQFLYTKYQPLENTRTDEEMARKLHRAIN 180
Query: 181 SSPRILKNSSGSDARGHRHKRFKGSPGSEKTKVSNCGISQELDPTPRCNGHARTSEADSE 240
SSPRILKNSSGSDARGH+HK+ K SPGSEK VSNCGISQEL+PTP CNGHA+T+EADSE
Sbjct: 181 SSPRILKNSSGSDARGHKHKKLKTSPGSEKIMVSNCGISQELEPTPTCNGHAKTNEADSE 240
Query: 241 GSVQEVRKLKAD------EKNNQSEMDNGEAETSQKE-KTCDNISVAVKKRGRVKLRKLP 300
S QEV KLK+D EKNNQS+MD GEAETSQKE KTCD+I+V KK+GRVKL+KL
Sbjct: 241 CSFQEVYKLKSDEKTIKYEKNNQSQMDTGEAETSQKEKKTCDDINVTGKKKGRVKLKKLS 300
Query: 301 LSICSFRDQTTLKEDMNDGSSPMSSVQ---SPTSENVILHSVD--SPTEGVMAIEPASVW 360
LSICSFRDQ LKEDM++GSSP+ +VQ SPT ENVILHSVD SPT+GV+ I+ S+W
Sbjct: 301 LSICSFRDQKALKEDMDNGSSPILAVQNTGSPTPENVILHSVDSPSPTQGVLPIDSTSLW 360
Query: 361 KCQEFNPPLSVKQNKVMQS 368
KCQEF PLSV+QNKVMQS
Sbjct: 361 KCQEFKAPLSVEQNKVMQS 379
BLAST of CmoCh16G013360 vs. ExPASy TrEMBL
Match:
A0A5D3CHI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00150 PE=4 SV=1)
HSP 1 Score: 562.4 bits (1448), Expect = 1.4e-156
Identity = 311/376 (82.71%), Postives = 334/376 (88.83%), Query Frame = 0
Query: 1 MEANICDVNHLDSDVLLPPRKRLLAGLRKQGADGDGTFNLPPVASSSCSPPPSPSYGFTS 60
ME NICDVNHL+SDVLLPPRKRLLAGLRKQG DGDGTFNLPPVASS+CSPPPSPSYGFTS
Sbjct: 1 MEGNICDVNHLNSDVLLPPRKRLLAGLRKQGGDGDGTFNLPPVASSTCSPPPSPSYGFTS 60
Query: 61 IEFNMRLNNLFSAHSNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVAAA 120
IEFN+RLN+L SAHSN+NLS EEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAV A
Sbjct: 61 IEFNIRLNSLLSAHSNSNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVTVA 120
Query: 121 KSAMDLVATISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAIN 180
KSAMDLVA+ISEEAAYKEINLRKNKLKKHVPVQ LYTKYQPLENTKTDEELARKLHRAIN
Sbjct: 121 KSAMDLVASISEEAAYKEINLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARKLHRAIN 180
Query: 181 SSPRILKNSSGSDARGHRHKRFKGSPGSEKTKVSNCGISQELDPTPRCNGHARTSEADSE 240
SSPRILKNSSGSD R H+HK+ K S SEK +VSNCGISQ+LDP CNGHA+++EADSE
Sbjct: 181 SSPRILKNSSGSDVRSHKHKKLKSSTSSEKIRVSNCGISQDLDPATTCNGHAKSNEADSE 240
Query: 241 GSVQEVRKLKAD------EKNNQSEMDNGEAETSQKEKTCDNISVAVKKRGRVKLRKLPL 300
S QEV K K D EKNNQS D+GE ETSQKEKTCD+ISV +KKRGRVKL+KLPL
Sbjct: 241 CSFQEVYKPKPDEKTSKYEKNNQSLTDDGE-ETSQKEKTCDDISVTIKKRGRVKLKKLPL 300
Query: 301 SICSFRDQTTLKEDMNDGSSPMSSVQ---SPTSENVILHSVDSPTEGVMAIEPASVWKCQ 360
SICSFRD+TTLKEDMN+GSSP+ +VQ SPTSE VILHSVDSPTEGVM I+ SVWKCQ
Sbjct: 301 SICSFRDKTTLKEDMNNGSSPILTVQNMGSPTSEKVILHSVDSPTEGVMPIDSTSVWKCQ 360
Query: 361 EFNPPLSVKQNKVMQS 368
EF PLSVKQNKV+QS
Sbjct: 361 EFKAPLSVKQNKVVQS 375
BLAST of CmoCh16G013360 vs. TAIR 10
Match:
AT4G35510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17540.3); Has 182 Blast hits to 179 proteins in 73 species: Archae - 0; Bacteria - 87; Metazoa - 17; Fungi - 9; Plants - 50; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). )
HSP 1 Score: 179.9 bits (455), Expect = 3.8e-45
Identity = 155/373 (41.55%), Postives = 211/373 (56.57%), Query Frame = 0
Query: 1 MEANICDVNHLDSDVLLPPRKRLLAGLRKQGADGDGTFNLPPVASSSCSPPPSPSYGFTS 60
ME N CD+N LDSD LPPRKRLLAG +K ++G + ASSS + S S G +S
Sbjct: 1 METNPCDMNQLDSDSHLPPRKRLLAGFKKFNSNGINGSSPSDFASSSST---SNSNGSSS 60
Query: 61 IEFNMR--LNNLFSAHSNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVA 120
N++ L NL S+ N + S EE+VEA+RSAAA AVKAA+AARA A EKA I+A+A+A
Sbjct: 61 ASTNVQTHLGNLLSSPFNNDQSPEELVEATRSAAALAVKAAKAARAIANEKALISAKAIA 120
Query: 121 AAKSAMDLVATISEEAA--YKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLH 180
AAK A++LV + +EA KE + RKNK KKHVPV+LLY+K Q + +++LAR+LH
Sbjct: 121 AAKRALELVDSFPKEAMADCKERSPRKNKQKKHVPVELLYSKGQLRDE---EDDLARRLH 180
Query: 181 RAIN--SSPRILKNSSGSDARGHRHKRFKGSPGSEKTKVSNCGISQELDPTPRCNGHART 240
RAI+ S PR+L+ S+ G R+K+ K K K G S + T A
Sbjct: 181 RAIDNTSYPRVLRT---SEENGQRYKKQK------KNKSVVEGGSSSIIVTGSMKDIAGV 240
Query: 241 SEADSEGSVQEVRKLKADEKNNQSEMDNGEAETSQKEKTCDNISVAVKKRGRVKLRKLPL 300
++DS E+ + DE ++ M EK+ + + VK+RGRVKL+KLPL
Sbjct: 241 VDSDSSYEGLEIARSNRDEADSMLMM----------EKSGEESNSLVKRRGRVKLKKLPL 300
Query: 301 SICSFRDQTTLKEDMNDGSSPMSSVQSPTSENVILHSVDSPTEGVMAIEPASVWKCQEFN 360
SIC+ R+Q E+ +SP+ Q I I +S WKCQ+
Sbjct: 301 SICNSRNQ----ENGTSSASPLPVAQPQEDGGAI-----------TVIAGSSSWKCQDIK 333
Query: 361 PPLSVKQNKVMQS 368
P VKQNK ++S
Sbjct: 361 APECVKQNKAVRS 333
BLAST of CmoCh16G013360 vs. TAIR 10
Match:
AT2G17540.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )
HSP 1 Score: 106.7 bits (265), Expect = 4.1e-23
Identity = 119/370 (32.16%), Postives = 170/370 (45.95%), Query Frame = 0
Query: 1 MEANICDVNHLDSDVLLPPRKRLLAGLRKQGADGDGTFNLPPVASSSCSPPPSPSYGFTS 60
M N C L+SD LLPPRKRLLAG + Q + PP ASSS S S ++
Sbjct: 1 MATNAC----LESDSLLPPRKRLLAGFKNQNSRISNESPSPPFASSSSSTTTSNGSSASA 60
Query: 61 IEFNMRLNNLFSAHSNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVAAA 120
+ L++L + + S EE+ +AS++ AA AVK A+AARA A EKA IA++AVAAA
Sbjct: 61 VVHTHHLDHLLNDQTR---SPEELAQASKATAALAVKVAKAARATANEKAIIASKAVAAA 120
Query: 121 KSAMDLVATISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAIN 180
K+A++L A+ P T + +E +L RAIN
Sbjct: 121 KNALELFASF------------------------------PAAETVSCKE--PRLIRAIN 180
Query: 181 SSPRILKNSSGSDARGHRHKRFKGSPGSEKTKVSNCGISQELDPTPRCNGHARTSEADSE 240
+SPR+L +D GHR+K+ +KT S +G+ DS+
Sbjct: 181 NSPRVL-----TDCSGHRNKK-------QKTLTSTMN-----------DGNDVAGVVDSD 240
Query: 241 GSVQEVRKLKADEKNNQSEMDNGEAETSQKEKTCDNISVAVKKRGRVKLRKLPLSICSFR 300
+ KL + + KEKT + S K+RGRV KLPLS+C+++
Sbjct: 241 DGTRVNGKLLL-------------CDNTLKEKTEEESSSLGKRRGRV---KLPLSMCAYK 275
Query: 301 DQ---TTLKEDMNDGSSPMSSVQSPTSENVILHSVDSPTEGVMAIEPASVWKCQEFNPPL 360
DQ TL+E+ N+ + + GV + WKCQ+ P
Sbjct: 301 DQENGITLEEN-----------------NLSVSKSEGYNGGVAQVIERPSWKCQDLKSPE 275
Query: 361 SVKQNKVMQS 368
VKQNKV++S
Sbjct: 361 CVKQNKVVRS 275
BLAST of CmoCh16G013360 vs. TAIR 10
Match:
AT2G17540.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35510.1); Has 39 Blast hits to 39 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )
HSP 1 Score: 106.7 bits (265), Expect = 4.1e-23
Identity = 119/370 (32.16%), Postives = 170/370 (45.95%), Query Frame = 0
Query: 1 MEANICDVNHLDSDVLLPPRKRLLAGLRKQGADGDGTFNLPPVASSSCSPPPSPSYGFTS 60
M N C L+SD LLPPRKRLLAG + Q + PP ASSS S S ++
Sbjct: 1 MATNAC----LESDSLLPPRKRLLAGFKNQNSRISNESPSPPFASSSSSTTTSNGSSASA 60
Query: 61 IEFNMRLNNLFSAHSNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVAAA 120
+ L++L + + S EE+ +AS++ AA AVK A+AARA A EKA IA++AVAAA
Sbjct: 61 VVHTHHLDHLLNDQTR---SPEELAQASKATAALAVKVAKAARATANEKAIIASKAVAAA 120
Query: 121 KSAMDLVATISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAIN 180
K+A++L A+ P T + +E +L RAIN
Sbjct: 121 KNALELFASF------------------------------PAAETVSCKE--PRLIRAIN 180
Query: 181 SSPRILKNSSGSDARGHRHKRFKGSPGSEKTKVSNCGISQELDPTPRCNGHARTSEADSE 240
+SPR+L +D GHR+K+ +KT S +G+ DS+
Sbjct: 181 NSPRVL-----TDCSGHRNKK-------QKTLTSTMN-----------DGNDVAGVVDSD 240
Query: 241 GSVQEVRKLKADEKNNQSEMDNGEAETSQKEKTCDNISVAVKKRGRVKLRKLPLSICSFR 300
+ KL + + KEKT + S K+RGRV KLPLS+C+++
Sbjct: 241 DGTRVNGKLLL-------------CDNTLKEKTEEESSSLGKRRGRV---KLPLSMCAYK 275
Query: 301 DQ---TTLKEDMNDGSSPMSSVQSPTSENVILHSVDSPTEGVMAIEPASVWKCQEFNPPL 360
DQ TL+E+ N+ + + GV + WKCQ+ P
Sbjct: 301 DQENGITLEEN-----------------NLSVSKSEGYNGGVAQVIERPSWKCQDLKSPE 275
Query: 361 SVKQNKVMQS 368
VKQNKV++S
Sbjct: 361 CVKQNKVVRS 275
BLAST of CmoCh16G013360 vs. TAIR 10
Match:
AT2G17540.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 106.7 bits (265), Expect = 4.1e-23
Identity = 119/370 (32.16%), Postives = 170/370 (45.95%), Query Frame = 0
Query: 1 MEANICDVNHLDSDVLLPPRKRLLAGLRKQGADGDGTFNLPPVASSSCSPPPSPSYGFTS 60
M N C L+SD LLPPRKRLLAG + Q + PP ASSS S S ++
Sbjct: 1 MATNAC----LESDSLLPPRKRLLAGFKNQNSRISNESPSPPFASSSSSTTTSNGSSASA 60
Query: 61 IEFNMRLNNLFSAHSNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVAAA 120
+ L++L + + S EE+ +AS++ AA AVK A+AARA A EKA IA++AVAAA
Sbjct: 61 VVHTHHLDHLLNDQTR---SPEELAQASKATAALAVKVAKAARATANEKAIIASKAVAAA 120
Query: 121 KSAMDLVATISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAIN 180
K+A++L A+ P T + +E +L RAIN
Sbjct: 121 KNALELFASF------------------------------PAAETVSCKE--PRLIRAIN 180
Query: 181 SSPRILKNSSGSDARGHRHKRFKGSPGSEKTKVSNCGISQELDPTPRCNGHARTSEADSE 240
+SPR+L +D GHR+K+ +KT S +G+ DS+
Sbjct: 181 NSPRVL-----TDCSGHRNKK-------QKTLTSTMN-----------DGNDVAGVVDSD 240
Query: 241 GSVQEVRKLKADEKNNQSEMDNGEAETSQKEKTCDNISVAVKKRGRVKLRKLPLSICSFR 300
+ KL + + KEKT + S K+RGRV KLPLS+C+++
Sbjct: 241 DGTRVNGKLLL-------------CDNTLKEKTEEESSSLGKRRGRV---KLPLSMCAYK 275
Query: 301 DQ---TTLKEDMNDGSSPMSSVQSPTSENVILHSVDSPTEGVMAIEPASVWKCQEFNPPL 360
DQ TL+E+ N+ + + GV + WKCQ+ P
Sbjct: 301 DQENGITLEEN-----------------NLSVSKSEGYNGGVAQVIERPSWKCQDLKSPE 275
Query: 361 SVKQNKVMQS 368
VKQNKV++S
Sbjct: 361 CVKQNKVVRS 275
BLAST of CmoCh16G013360 vs. TAIR 10
Match:
AT5G66000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17540.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 60.1 bits (144), Expect = 4.4e-09
Identity = 61/145 (42.07%), Postives = 89/145 (61.38%), Query Frame = 0
Query: 52 PSPSYGFTSIEFNMRLNNLFSAH-SNTNLSSEEIVEASRSAAAAAVKAAEAARAAAEEKA 111
P PS T++++++ + L ++H SN +L+ +EI +ASR AAAA AA+AARA A+EKA
Sbjct: 17 PHPS---TNVDYHLSI--LLASHLSNPDLTPQEIADASRCTAAAAAIAAKAARATADEKA 76
Query: 112 AIAARAVAAAKSAMDLVATI-SEEAAYKEINLRKNK--LKKHVPVQLLYTKYQPLENTKT 171
A AA+AVAAAK+A+DL+A+ + ++ L K+K KKHV LL++K
Sbjct: 77 AAAAKAVAAAKTALDLIASFPPNQGLVQDACLHKDKKMKKKHVAADLLFSK--------- 136
Query: 172 DEELARKLHRAINSSPRILKNSSGS 193
D+ L KL S I+ NSS S
Sbjct: 137 DDALPSKLQLGGVVSQGIVSNSSSS 147
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1E5V1 | 2.5e-193 | 100.00 | uncharacterized protein LOC111430990 OS=Cucurbita moschata OX=3662 GN=LOC1114309... | [more] |
A0A6J1L152 | 2.4e-188 | 97.83 | uncharacterized protein LOC111500210 OS=Cucurbita maxima OX=3661 GN=LOC111500210... | [more] |
A0A6J1DVF5 | 5.2e-159 | 83.78 | uncharacterized protein LOC111024810 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1G7K8 | 4.8e-157 | 82.32 | uncharacterized protein LOC111451593 OS=Cucurbita moschata OX=3662 GN=LOC1114515... | [more] |
A0A5D3CHI9 | 1.4e-156 | 82.71 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT4G35510.1 | 3.8e-45 | 41.55 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT2G17540.2 | 4.1e-23 | 32.16 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT2G17540.1 | 4.1e-23 | 32.16 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT2G17540.3 | 4.1e-23 | 32.16 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT5G66000.1 | 4.4e-09 | 42.07 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |