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CmoCh16G013240 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATTCTCTGAATTTCACTCCCACTAAACTTTCCGATGCAATTCACTTCGTTGTTCTTCTGATCGATCAATTCGGAGGAATTGGTTAAGGAAGCAGGTTTTGTTTCAGAGACTGCGTTTTGTTTTCTGTTTTGACAGTGAATTTTGCGTACTGATTACGGACTTCAATTGTTGAGGTTCTGTTATATGCAAGCTACACCACTCTGGATGATTTTTTTTTTTTTTTTTAATTTTATCGTGTGAAATTGTTAATTCTCTCAAATTATGTTGTAGATTGATGATTTTGAGAAAATGAAGTGATTAATGAGTCTATTTTTCGGAGAACTTCTTGTTTGCTACCACGAATTTCCTTCTAGCCTTTCAAACATATGATATCTAACCTGTTCTTCCTTATATGGATCTTGCTCTGGTGGTTCTCCGATTTCTGGAATAGTTGTGCTTGTTATGATTCCTGGTGATATTTTTGTTCATAATCGAGCCATTGAATTTCTCCGCTTACTGATTTCGGCAAACCAAAATCTCAGGAAAATGAGGGGAGATTTTGGTTTGGATTTTCTAATTAGGGCGTACTGTTGATTCTGTAGCTCATATTCATACATGATTTTATTCTCATGCATCCTCCGAATCAAATTCTTCTAAGCAGATGGACCTGCACTCATCTTATAATGAAAATGACAAGGCTGCTGATGGATGGAACAGCGGTAAGAAGATGGGAAAATCACGCCGACGGGAACACCCTCAGGAGGAGGAATTACAAAAGTTCAAGAAGGAATCTGAAGCATGGCAAGCTGCAAGGTTTAGGGAGTGTTCAAGGGTTATTGAAGTTAGTAGAGCATTAATAGACTGTCTCTCTTGCTCAGGAAAACCTTGTCAAGAAGAAGATTGCCAACTGTTGTGA ATTCTCTGAATTTCACTCCCACTAAACTTTCCGATGCAATTCACTTCGTTGTTCTTCTGATCGATCAATTCGGAGGAATTGGTTAAGGAAGCAGGTTTTGTTTCAGAGACTGCGTTTTGTTTTCTGTTTTGACAGTGAATTTTGCGTACTGATTACGGACTTCAATTGTTGAGATGGACCTGCACTCATCTTATAATGAAAATGACAAGGCTGCTGATGGATGGAACAGCGGTAAGAAGATGGGAAAATCACGCCGACGGGAACACCCTCAGGAGGAGGAATTACAAAAGTTCAAGAAGGAATCTGAAGCATGGCAAGCTGCAAGGTTTAGGGAGTGTTCAAGGGTTATTGAAGTTAGTAGAGCATTAATAGACTGTCTCTCTTGCTCAGGAAAACCTTGTCAAGAAGAAGATTGCCAACTGTTGTGA ATGGACCTGCACTCATCTTATAATGAAAATGACAAGGCTGCTGATGGATGGAACAGCGGTAAGAAGATGGGAAAATCACGCCGACGGGAACACCCTCAGGAGGAGGAATTACAAAAGTTCAAGAAGGAATCTGAAGCATGGCAAGCTGCAAGGTTTAGGGAGTGTTCAAGGGTTATTGAAGTTAGTAGAGCATTAATAGACTGTCTCTCTTGCTCAGGAAAACCTTGTCAAGAAGAAGATTGCCAACTGTTGTGA MDLHSSYNENDKAADGWNSGKKMGKSRRREHPQEEELQKFKKESEAWQAARFRECSRVIEVSRALIDCLSCSGKPCQEEDCQLL Homology
BLAST of CmoCh16G013240 vs. ExPASy TrEMBL
Match: A0A1S3BKM8 (uncharacterized protein LOC103490651 OS=Cucumis melo OX=3656 GN=LOC103490651 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.5e-18 Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = 0
BLAST of CmoCh16G013240 vs. ExPASy TrEMBL
Match: A0A5D3CJM8 (RB1-inducible coiled-coil protein 1, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00260 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.5e-18 Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = 0
BLAST of CmoCh16G013240 vs. ExPASy TrEMBL
Match: A0A6J1CW53 (uncharacterized protein LOC111014768 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014768 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.3e-17 Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of CmoCh16G013240 vs. ExPASy TrEMBL
Match: A0A6J1CUS2 (uncharacterized protein LOC111014768 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014768 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.3e-17 Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of CmoCh16G013240 vs. ExPASy TrEMBL
Match: A0A0A0L638 (DUF4378 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002320 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 8.6e-17 Identity = 51/64 (79.69%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of CmoCh16G013240 vs. TAIR 10
Match: AT2G17550.1 (unknown protein; Has 264 Blast hits to 258 proteins in 65 species: Archae - 5; Bacteria - 5; Metazoa - 66; Fungi - 16; Plants - 107; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 7.9e-07 Identity = 23/34 (67.65%), Postives = 31/34 (91.18%), Query Frame = 0
BLAST of CmoCh16G013240 vs. TAIR 10
Match: AT2G17550.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 215 Blast hits to 205 proteins in 55 species: Archae - 5; Bacteria - 0; Metazoa - 50; Fungi - 10; Plants - 99; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 7.9e-07 Identity = 23/34 (67.65%), Postives = 31/34 (91.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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