CmoCh16G012840 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G012840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Translocase of chloroplast
Location	Cmo_Chr16: 9153773 .. 9156051 (-)
RNA-Seq Expression	CmoCh16G012840
Synteny	CmoCh16G012840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCACACAGCTTCATGGCATCCCAGGTTATCCGTGAGTGGATTGGGATTAACAACTTTGCAATGGCCACACAAGTCAAATTACTTGAGTTGCTGGGAAGACTGAAACTGGAGGTCATATATTCATTTTTACCCATATGTCGTGGTCACGAATCCGTATCTTCGTGATTTATTTTTCCATTTAAGCCTTTGCACTGCATTTTTCACAATCTCTAATGATTCATTGACTTTTGATATCTTTCTACAGAATGTCAGCACCTTGACCATACTTGTAATGGGAAAGGGTGGCGTTGGAAAGTCATCCACTGTGAATTCCATTATTGGTGAAAGAGCTGTTTCTGTTAGTCCTTTTCAGGTACTTTAGTTATTCACTTCACTTGAATTTTGGTTGATTGAAGTGCACAGAAGGTTCATGATTTGATTTCAGAAATGAAATGTTTATAGTCAGAAGTGCCAAGGCCTGTGATGGTTTCTCGCTCAAGGGCTGGATTTACATTAAACATCATTGATACACCTGGTATCATAGAAGGAGGTTGTATCAATGATCAGACACTTGAGATCATAAAACGGTAATTTCTAATGTTACTTTTTACTTCAGACTGATTTTTTTCGAGATAATTATGTGGGTCTTGTCTTTGTATTTCCTTATCTTTCTTTTTTGAGCAGCTTTCTTTTGAATAAGACCATAGATATTCTTCTCTATGTGGACCGCTTGGATGCATATAGAGTAGATAACTTGGAAAAGCAGGTTATTAAGGCCATAACAAACAGCTTTGGTAAAGCAATATGGAATAGGGCTTTGGTCGTCCTCACTCATGCTCAATTTTCCCCACCAGATGGAGTACCATATGAAGAATTTTTCTCCAGACGATCAGAAGCTCTACTGAAAACCGTCCGATTCGGTCCCTCTTCCAACAAAAAAGATATTCAGGTGGCTTTTGCTATTTTGTTTGCCATTGTGAGCAAATCTTGAGTTCCATTTTGTTTTCTGTACCCTTTTTTATTGTATGCCTATATGTCTATGTGAACATATTTTTAGTCGATAATACTCATGTCATCACATTTGATCTTTCCTGCCCCTGTTTTCTTCCATTTGTTCTCAATAAAAAATTTTGTTTTATCATTTAAAAAACTGATAGATTTCAAGGAAAATCCTTGAATATCTTCAGTAAATTTTTCTGTTACTGATAGATTTCAACTGAAGATATTCAAGGATTTCCTGCCCATGTCTTTGATCTTTCTTTCAGTAAAATCTATCAGAATTACGGCATGAGATGAAATCCATTTCTTCCTTTTGTTCCACAGAAGATTAGATTACTTAATTTACTTGTCGCTCATTGAATGATAAAAGTATTTAAATTCTGTACCTTCTAGGCGTTGAATATTCCAGTTGTTTTGGTTGAGAACAGTGGACGGTGCAATAAGAACGAGAAAGATGAAAAGGTTCTACTTCTCTCTCTCTGTCTTAAAAATGTTCATTAGAATCTTTTCAACTTATTGGTTGGACTAATCTTTTTCTCAACAGGTTCTTCCAAATGGGATTGCTTGGATTCCTCACTTGGTTGAGACAATCACCGCAGTTGTGTTGAAAGAAGGAACCAAGTCTATTTTTGTTGATAAAAATTTGATCGCAGGCCCAAACCCCAATCAAAGGGGAAAGTTGCTGATTCCTTTTATTGTTGTACTCCAAGTATGCATCTGAAACTTAAAACGATTCTATAATTTTCCTCTTCTCTTACGATTTAGGGACTGACCCCATATCTGTTTGCTTCTTATGTTGGCTTGTTATTCACAGTATCTCTTCGCTGTTAGACCTATTGAGCGAGCAATAAGAAGTGATATATTAAATGAAAGTAGACCATCGTGGGAGACGCATGAGTACTAGCTTATCCAGCCGCAGGTATTGATTTGGCCTCATAAATATCCTGAGCGATCAATAGGGTTGTTTGGTGAGTTAATCCGAGTCTTTTTGTCCATGTTGAGATTTGAGATTTGAGATTAGACTTTGTCGTATTTTTTTAGAAGTTTGAATTTTGAAACAACTGAGTTTCTGTAAGCAAATTCATATACGCTACAAGGTTTAGCTACTCGGATTTAGTTAAGCAAGAAATTATTCGATTTCTTCTAGAAGCGGATGATTATTCATCTGCTTCTCGCGTTCCGTGAATAGTTTTATTTAATACATTATAATGTTCCCCAATCCCCATCACTCTTCCCAATGGGCAATCGAACTTTCAAACTCATGCAAATGTTATAATGTTCATGATCGAGATATTTAATAT

mRNA sequence

GCACACAGCTTCATGGCATCCCAGGTTATCCGTGAGTGGATTGGGATTAACAACTTTGCAATGGCCACACAAGTCAAATTACTTGAGTTGCTGGGAAGACTGAAACTGGAGGTCATATATTCATTTTTACCCATATGTCGTGGTCACGAATCCAATGTCAGCACCTTGACCATACTTGTAATGGGAAAGGGTGGCGTTGGAAAGTCATCCACTGTGAATTCCATTATTGGTGAAAGAGCTGTTTCTGTTAGTCCTTTTCAGTCAGAAGTGCCAAGGCCTGTGATGGTTTCTCGCTCAAGGGCTGGATTTACATTAAACATCATTGATACACCTGGTATCATAGAAGGAGGTTGTATCAATGATCAGACACTTGAGATCATAAAACGCTTTCTTTTGAATAAGACCATAGATATTCTTCTCTATGTGGACCGCTTGGATGCATATAGAGTAGATAACTTGGAAAAGCAGGTTATTAAGGCCATAACAAACAGCTTTGGTAAAGCAATATGGAATAGGGCTTTGGTCGTCCTCACTCATGCTCAATTTTCCCCACCAGATGGAGTACCATATGAAGAATTTTTCTCCAGACGATCAGAAGCTCTACTGAAAACCGTCCGATTCGGTCCCTCTTCCAACAAAAAAGATATTCAGGTGGCTTTTGCTATTTTGTTTGCCATTGCGTTGAATATTCCAGTTGTTTTGGTTGAGAACAGTGGACGGTGCAATAAGAACGAGAAAGATGAAAAGGTTCTTCCAAATGGGATTGCTTGGATTCCTCACTTGGTTGAGACAATCACCGCAGTTGTGTTGAAAGAAGGAACCAAGTCTATTTTTGTTGATAAAAATTTGATCGCAGGCCCAAACCCCAATCAAAGGGGAAAGTTGCTGATTCCTTTTATTGTTGTACTCCAATATCTCTTCGCTGTTAGACCTATTGAGCGAGCAATAAGAAGTGATATATTAAATGAAAGTAGACCATCGTGGGAGACGCATGAGTACTAGCTTATCCAGCCGCAGGTATTGATTTGGCCTCATAAATATCCTGAGCGATCAATAGGGTTGTTTGGTGAGTTAATCCGAGTCTTTTTGTCCATGTTGAGATTTGAGATTTGAGATTAGACTTTGTCGTATTTTTTTAGAAGTTTGAATTTTGAAACAACTGAGTTTCTGTAAGCAAATTCATATACGCTACAAGGTTTAGCTACTCGGATTTAGTTAAGCAAGAAATTATTCGATTTCTTCTAGAAGCGGATGATTATTCATCTGCTTCTCGCGTTCCGTGAATAGTTTTATTTAATACATTATAATGTTCCCCAATCCCCATCACTCTTCCCAATGGGCAATCGAACTTTCAAACTCATGCAAATGTTATAATGTTCATGATCGAGATATTTAATAT

Coding sequence (CDS)

GCACACAGCTTCATGGCATCCCAGGTTATCCGTGAGTGGATTGGGATTAACAACTTTGCAATGGCCACACAAGTCAAATTACTTGAGTTGCTGGGAAGACTGAAACTGGAGGTCATATATTCATTTTTACCCATATGTCGTGGTCACGAATCCAATGTCAGCACCTTGACCATACTTGTAATGGGAAAGGGTGGCGTTGGAAAGTCATCCACTGTGAATTCCATTATTGGTGAAAGAGCTGTTTCTGTTAGTCCTTTTCAGTCAGAAGTGCCAAGGCCTGTGATGGTTTCTCGCTCAAGGGCTGGATTTACATTAAACATCATTGATACACCTGGTATCATAGAAGGAGGTTGTATCAATGATCAGACACTTGAGATCATAAAACGCTTTCTTTTGAATAAGACCATAGATATTCTTCTCTATGTGGACCGCTTGGATGCATATAGAGTAGATAACTTGGAAAAGCAGGTTATTAAGGCCATAACAAACAGCTTTGGTAAAGCAATATGGAATAGGGCTTTGGTCGTCCTCACTCATGCTCAATTTTCCCCACCAGATGGAGTACCATATGAAGAATTTTTCTCCAGACGATCAGAAGCTCTACTGAAAACCGTCCGATTCGGTCCCTCTTCCAACAAAAAAGATATTCAGGTGGCTTTTGCTATTTTGTTTGCCATTGCGTTGAATATTCCAGTTGTTTTGGTTGAGAACAGTGGACGGTGCAATAAGAACGAGAAAGATGAAAAGGTTCTTCCAAATGGGATTGCTTGGATTCCTCACTTGGTTGAGACAATCACCGCAGTTGTGTTGAAAGAAGGAACCAAGTCTATTTTTGTTGATAAAAATTTGATCGCAGGCCCAAACCCCAATCAAAGGGGAAAGTTGCTGATTCCTTTTATTGTTGTACTCCAATATCTCTTCGCTGTTAGACCTATTGAGCGAGCAATAAGAAGTGATATATTAAATGAAAGTAGACCATCGTGGGAGACGCATGAGTACTAG

Protein sequence

AHSFMASQVIREWIGINNFAMATQVKLLELLGRLKLEVIYSFLPICRGHESNVSTLTILVMGKGGVGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGCINDQTLEIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRALVVLTHAQFSPPDGVPYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIALNIPVVLVENSGRCNKNEKDEKVLPNGIAWIPHLVETITAVVLKEGTKSIFVDKNLIAGPNPNQRGKLLIPFIVVLQYLFAVRPIERAIRSDILNESRPSWETHEY

Homology

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BLAST of CmoCh16G012840 vs. ExPASy Swiss-Prot
Match: Q41009 (Translocase of chloroplast 34 OS=Pisum sativum OX=3888 GN=TOC34 PE=1 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 1.8e-123
Identity = 231/325 (71.08%), Postives = 260/325 (80.00%), Query Frame = 0


Query: 8   QVIREWIGINNFAMATQVKLLELLGRLKLEVIYSFLPICRGHESNVSTLTILVMGKGGVG 67
           Q +REW GIN FA ATQ KLLELLG LK E              +V++LTILVMGKGGVG
Sbjct: 6   QTVREWSGINTFAPATQTKLLELLGNLKQE--------------DVNSLTILVMGKGGVG 65

Query: 68  KSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGCINDQTLEII 127
           KSSTVNSIIGER VS+SPFQSE PRPVMVSRSRAGFTLNIIDTPG+IEGG IND  L II
Sbjct: 66  KSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNII 125

Query: 128 KRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRALVVLTHAQFSPPDG 187
           K FLL+KTID+LLYVDRLDAYRVDNL+K V KAIT+SFGK IWN+A+V LTHAQFSPPDG
Sbjct: 126 KSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDG 185

Query: 188 VPYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIALNIPVVLVENSGRCNKNEKD 247
           +PY+EFFS+RSEALL+ VR G +S KKD Q         A +IPVVL+ENSGRCNKN+ D
Sbjct: 186 LPYDEFFSKRSEALLQVVRSG-ASLKKDAQ---------ASDIPVVLIENSGRCNKNDSD 245

Query: 248 EKVLPNGIAWIPHLVETITAVVLKEGTKSIFVDKNLIAGPNPNQRGKLLIPFIVVLQYLF 307
           EKVLPNGIAWIPHLV+TIT V L + ++SIFVDKNLI GPNPNQRGKL IP I  LQYLF
Sbjct: 246 EKVLPNGIAWIPHLVQTITEVALNK-SESIFVDKNLIDGPNPNQRGKLWIPLIFALQYLF 305

Query: 308 AVRPIERAIRSDILNESRPSWETHE 333
             +PIE  IR DI  E++P+WET +
Sbjct: 306 LAKPIEALIRRDIATETKPAWETRD 305

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BLAST of CmoCh16G012840 vs. ExPASy Swiss-Prot
Match: Q38906 (Translocase of chloroplast 34, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC34 PE=1 SV=2)

HSP 1 Score: 384.4 bits (986), Expect = 1.3e-105
Identity = 191/327 (58.41%), Postives = 241/327 (73.70%), Query Frame = 0


Query: 6   ASQVIREWIGINNFAMATQVKLLELLGRLKLEVIYSFLPICRGHESNVSTLTILVMGKGG 65
           A Q +REWIGI  F  ATQ KLLE+LG+ K              E +VS+LT+LVMGKGG
Sbjct: 3   ALQTLREWIGIQQFPPATQSKLLEILGKYK--------------EEDVSSLTVLVMGKGG 62

Query: 66  VGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGCINDQTLE 125
           VGKSSTVNS+IGE+A +VS FQSE  RP +VSR+R+GFTLNIIDTPG+IEGG +NDQ + 
Sbjct: 63  VGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLIEGGYVNDQAIN 122

Query: 126 IIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRALVVLTHAQFSPP 185
           IIKRFLLN TID+LLYVDRLD YRVD+L++QV+ AIT++FGK IW ++ +VLTHAQFSPP
Sbjct: 123 IIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDAFGKEIWKKSALVLTHAQFSPP 182

Query: 186 DGVPYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIALNIPVVLVENSGRCNKNE 245
           DG+ Y  F S+RS ALLK ++ G    K+D+Q           +IPV+LVENSGRC+KNE
Sbjct: 183 DGLNYNHFVSKRSNALLKVIQTGAQLKKQDLQ---------GFSIPVILVENSGRCHKNE 242

Query: 246 KDEKVLPNGIAWIPHLVETITAVVLKEGTKSIFVDKNLIAGPNPNQRGKLLIPFIVVLQY 305
            DEK+LP G +WIP+L   IT +    G K+I VDK L+ GPNPN+RGK LIP +   QY
Sbjct: 243 SDEKILPCGTSWIPNLFNKITEISF-NGNKAIHVDKKLVEGPNPNERGKKLIPLMFAFQY 302

Query: 306 LFAVRPIERAIRSDILNESRPSWETHE 333
           L  ++P+ RAI+SD+  ES+P+WE  +
Sbjct: 303 LLVMKPLVRAIKSDVSRESKPAWELRD 305

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BLAST of CmoCh16G012840 vs. ExPASy Swiss-Prot
Match: O23680 (Translocase of chloroplast 33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC33 PE=1 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 7.6e-90
Identity = 171/318 (53.77%), Postives = 225/318 (70.75%), Query Frame = 0


Query: 9   VIREWIGINNFAMATQVKLLELLGRLKLEVIYSFLPICRGHESNVSTLTILVMGKGGVGK 68
           ++REW+G   F  ATQ KL+E  G+LK              + +++++T+LV+GKGGVGK
Sbjct: 4   LVREWVGFQQFPAATQEKLIEFFGKLK--------------QKDMNSMTVLVLGKGGVGK 63

Query: 69  SSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGCINDQTLEIIK 128
           SSTVNS+IGE+ V VSPFQ+E  RPVMVSR+  GFT+NIIDTPG++E G +N Q LE+IK
Sbjct: 64  SSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIK 123

Query: 129 RFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRALVVLTHAQFSPPDGV 188
            FL+N+TID+LLYVDRLD YRVD L+KQV+ AIT +FGK IW + L+VLTHAQFSPPD +
Sbjct: 124 GFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPDEL 183

Query: 189 PYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIALNIPVVLVENSGRCNKNEKDE 248
            YE F S+RS++LLKT+R G    K++ + +          I VV  ENSGRC+KN+KDE
Sbjct: 184 SYETFSSKRSDSLLKTIRAGSKMRKQEFEDS---------AIAVVYAENSGRCSKNDKDE 243

Query: 249 KVLPNGIAWIPHLVETITAVVLKEGTKSIFVDKNLIAGPNPNQRGKLLIPFIVVLQYLFA 308
           K LPNG AWIP+LV+ IT V   +  K+I VDK ++ G   + +GK LIP I+  QYL  
Sbjct: 244 KALPNGEAWIPNLVKAITDVATNQ-RKAIHVDKKMVDGSYSDDKGKKLIPLIIGAQYLI- 296

Query: 309 VRPIERAIRSDILNESRP 327
           V+ I+ AIR+DI    +P
Sbjct: 304 VKMIQGAIRNDIKTSGKP 296

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BLAST of CmoCh16G012840 vs. ExPASy Swiss-Prot
Match: Q9LUS2 (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC120 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-30
Identity = 92/294 (31.29%), Postives = 142/294 (48.30%), Query Frame = 0


Query: 57  TILVMGKGGVGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEG 116
           TI+V+GK GVGKS+T+NSI  E  +S   FQ    +   +     G  + +IDTPG++  
Sbjct: 458 TIMVLGKSGVGKSATINSIFDELKISTDAFQVGTKKVQDIEGFVQGIKVRVIDTPGLLPS 517

Query: 117 GC---INDQTLEIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRA 176
                 N++ L+ ++ F+     DI+LY+DRLD    D+ +  +++ IT+ FG +IW  A
Sbjct: 518 WSDQHKNEKILKSVRAFIKKSPPDIVLYLDRLDMQSRDSGDMPLLRTITDVFGPSIWFNA 577

Query: 177 LVVLTHAQFSPPDG-----VPYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIAL 236
           +V LTHA  +PPDG       Y+ F ++RS  + + +R                   + L
Sbjct: 578 IVGLTHAASAPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAGD--------------MRL 637

Query: 237 NIPVVLVENSGRCNKNEKDEKVLPNGIAWIPH-LVETITAVVLKEGTKSIFVDKNLIAGP 296
             PV LVEN   C  N   ++VLPNG  W PH L+ +  + +L E    + +  N+  G 
Sbjct: 638 MNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDNIPGGQ 697

Query: 297 NPNQRGKLLIPFIVVLQYLFAVRPIERAIR--------SDILNESRPSWETHEY 334
              +     +P  ++L  L   RP  +            D L+ES  S E  EY
Sbjct: 698 FATRSKAPPLP--LLLSSLLQSRPQAKLPEQQYDDEDDEDDLDESSDSEEESEY 735

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BLAST of CmoCh16G012840 vs. ExPASy Swiss-Prot
Match: A9SY65 (Translocase of chloroplast 108, chloroplastic OS=Physcomitrium patens OX=3218 GN=TOC108 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-30
Identity = 93/276 (33.70%), Postives = 143/276 (51.81%), Query Frame = 0


Query: 57  TILVMGKGGVGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEG 116
           TILV+GK GVGKSST+NSI  ER    S F+    +   V  +  G  + +IDTPG++  
Sbjct: 364 TILVLGKTGVGKSSTINSIFDERKSVTSAFKPSTNKVQEVIGTVHGIKVRVIDTPGLLPS 423

Query: 117 GC---INDQTLEIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRA 176
                 N++ +  +K+++   + DI+LY DRLD    D  +  +++ IT+ FG A+W  A
Sbjct: 424 VADQQHNERIMGQVKKYIKKASPDIVLYFDRLDMQSRDFGDLPLLRTITDLFGAAVWFNA 483

Query: 177 LVVLTHAQFSPPDG-----VPYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIAL 236
           +VVLTHA  +PPDG     + YE F ++RS  + +T+R                   + L
Sbjct: 484 IVVLTHASSAPPDGPNGVPLSYEMFVAQRSHVVQQTIRQAAGD--------------MRL 543

Query: 237 NIPVVLVENSGRCNKNEKDEKVLPNGIAWIPH-LVETITAVVLKEGTKSIFVDKNLIAGP 296
             PV LVEN   C  N   ++VLPNG  W P  L+    + +L E    + + +    G 
Sbjct: 544 MNPVSLVENHPACRTNRTGQRVLPNGQIWKPQLLLLCFASKILAEANSLLKLQETTAPGR 603

Query: 297 NPNQRGKL-LIPFIV--VLQYLFAVR-PIERAIRSD 320
              QR ++  +PF++  +LQ    ++ P E+A  SD
Sbjct: 604 PFGQRSRVPPLPFLLSSLLQSRAQLKLPDEQAGESD 625

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BLAST of CmoCh16G012840 vs. ExPASy TrEMBL
Match: A0A6J1C1Z3 (Translocase of chloroplast OS=Momordica charantia OX=3673 GN=LOC111007215 PE=3 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.7e-143
Identity = 274/328 (83.54%), Postives = 282/328 (85.98%), Query Frame = 0


Query: 5   MASQVIREWIGINNFAMATQVKLLELLGRLKLEVIYSFLPICRGHESNVSTLTILVMGKG 64
           MASQVIREWIGIN FAMATQ KLLELLGRLK E              NVSTLTILVMGKG
Sbjct: 1   MASQVIREWIGINTFAMATQDKLLELLGRLKQE--------------NVSTLTILVMGKG 60

Query: 65  GVGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGCINDQTL 124
           GVGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLN+IDTPGIIEGG INDQ L
Sbjct: 61  GVGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNVIDTPGIIEGGYINDQAL 120

Query: 125 EIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRALVVLTHAQFSP 184
           EIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAIT+SFGKAIWNRALVVLTHAQFSP
Sbjct: 121 EIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITDSFGKAIWNRALVVLTHAQFSP 180

Query: 185 PDGVPYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIALNIPVVLVENSGRCNKN 244
           PDG+PY+EFF+RRSEALLKTVR G S NK DIQ           NIPVVLVENSGRCNKN
Sbjct: 181 PDGLPYDEFFNRRSEALLKTVRSGASFNKNDIQ---------GSNIPVVLVENSGRCNKN 240

Query: 245 EKDEKVLPNGIAWIPHLVETITAVVLKEGTKSIFVDKNLIAGPNPNQRGKLLIPFIVVLQ 304
           EKDEKVLPNG AWIPHLVETIT VVL  G+KSIFVDK LI GPNPNQRGKLLIPFI  LQ
Sbjct: 241 EKDEKVLPNGTAWIPHLVETITTVVL-NGSKSIFVDKKLIEGPNPNQRGKLLIPFIFALQ 300

Query: 305 YLFAVRPIERAIRSDILNESRPSWETHE 333
           YLF V+PIERAIRSDI  ESRPSWET +
Sbjct: 301 YLFVVKPIERAIRSDISKESRPSWETRD 304

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BLAST of CmoCh16G012840 vs. ExPASy TrEMBL
Match: A0A5D3CLX1 (Translocase of chloroplast OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00700 PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 6.4e-140
Identity = 264/331 (79.76%), Postives = 282/331 (85.20%), Query Frame = 0


Query: 2   HSFMASQVIREWIGINNFAMATQVKLLELLGRLKLEVIYSFLPICRGHESNVSTLTILVM 61
           H+FMASQVIREW+GINNFAMATQ KLLEL+G+LK E              NV+TLTILVM
Sbjct: 5   HNFMASQVIREWVGINNFAMATQAKLLELMGKLKQE--------------NVNTLTILVM 64

Query: 62  GKGGVGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGCIND 121
           GKGGVGKSSTVNSIIGER VSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGG IND
Sbjct: 65  GKGGVGKSSTVNSIIGERVVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGYIND 124

Query: 122 QTLEIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRALVVLTHAQ 181
           Q LEIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAIT+SFGKAIW+RAL+VLTHAQ
Sbjct: 125 QALEIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITDSFGKAIWSRALIVLTHAQ 184

Query: 182 FSPPDGVPYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIALNIPVVLVENSGRC 241
           FSPPDG+PY+EF SRRSEAL+KTVRFG S  K +IQ          LNIPVVLVENSGRC
Sbjct: 185 FSPPDGLPYDEFVSRRSEALVKTVRFGASFRKVEIQ---------GLNIPVVLVENSGRC 244

Query: 242 NKNEKDEKVLPNGIAWIPHLVETITAVVLKEGTKSIFVDKNLIAGPNPNQRGKLLIPFIV 301
           +KNEKDEKVLPNGIAWIPHLVETIT VVLK G+KSIFVDK LI GPNPNQRGKLLIP I 
Sbjct: 245 SKNEKDEKVLPNGIAWIPHLVETITTVVLK-GSKSIFVDKTLIEGPNPNQRGKLLIPLIF 304

Query: 302 VLQYLFAVRPIERAIRSDILNESRPSWETHE 333
            LQY F V+PI+RAIR DI  + RPSWE  +
Sbjct: 305 ALQYFFVVKPIKRAIRRDIARQIRPSWELRD 311

[Close]

BLAST of CmoCh16G012840 vs. ExPASy TrEMBL
Match: A0A5A7UCN3 (Translocase of chloroplast OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold344G00690 PE=3 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.4e-139
Identity = 263/331 (79.46%), Postives = 282/331 (85.20%), Query Frame = 0


Query: 2   HSFMASQVIREWIGINNFAMATQVKLLELLGRLKLEVIYSFLPICRGHESNVSTLTILVM 61
           H+FMASQVIREW+GINNFAMATQ KLLEL+G+LK E              NV+TLTILVM
Sbjct: 5   HNFMASQVIREWVGINNFAMATQAKLLELMGKLKQE--------------NVNTLTILVM 64

Query: 62  GKGGVGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGCIND 121
           GKGGVGKSSTVNSIIGER VSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGG IND
Sbjct: 65  GKGGVGKSSTVNSIIGERVVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGYIND 124

Query: 122 QTLEIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRALVVLTHAQ 181
           Q LEIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAIT+SFGKAIW+RAL+VLTHAQ
Sbjct: 125 QALEIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITDSFGKAIWSRALIVLTHAQ 184

Query: 182 FSPPDGVPYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIALNIPVVLVENSGRC 241
           FSPPDG+PY+EF SRRSEAL++TVRFG S  K +IQ          LNIPVVLVENSGRC
Sbjct: 185 FSPPDGLPYDEFVSRRSEALVRTVRFGASFRKVEIQ---------GLNIPVVLVENSGRC 244

Query: 242 NKNEKDEKVLPNGIAWIPHLVETITAVVLKEGTKSIFVDKNLIAGPNPNQRGKLLIPFIV 301
           +KNEKDEKVLPNGIAWIPHLVETIT VVLK G+KSIFVDK LI GPNPNQRGKLLIP I 
Sbjct: 245 SKNEKDEKVLPNGIAWIPHLVETITTVVLK-GSKSIFVDKTLIEGPNPNQRGKLLIPLIF 304

Query: 302 VLQYLFAVRPIERAIRSDILNESRPSWETHE 333
            LQY F V+PI+RAIR DI  + RPSWE  +
Sbjct: 305 ALQYFFVVKPIKRAIRRDIARQIRPSWELRD 311

[Close]

BLAST of CmoCh16G012840 vs. ExPASy TrEMBL
Match: A0A0A0L123 (Translocase of chloroplast OS=Cucumis sativus OX=3659 GN=Csa_3G002790 PE=3 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 2.1e-138
Identity = 265/328 (80.79%), Postives = 281/328 (85.67%), Query Frame = 0


Query: 5   MASQVIREWIGINNFAMATQVKLLELLGRLKLEVIYSFLPICRGHESNVSTLTILVMGKG 64
           MASQVIREW+GINNFAMATQ KLLEL+G+LK E              NV+TLTILVMGKG
Sbjct: 1   MASQVIREWVGINNFAMATQAKLLELMGKLKQE--------------NVNTLTILVMGKG 60

Query: 65  GVGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGCINDQTL 124
           GVGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGG INDQ L
Sbjct: 61  GVGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGYINDQAL 120

Query: 125 EIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRALVVLTHAQFSP 184
           EIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGK IW RALVVLTHAQFSP
Sbjct: 121 EIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKVIWRRALVVLTHAQFSP 180

Query: 185 PDGVPYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIALNIPVVLVENSGRCNKN 244
           PDG+PY+EF SRRS ALL+TVR G S  + D QV         L+IPVVLVENSGRC+KN
Sbjct: 181 PDGLPYDEFVSRRSAALLETVRTGGSFIRNDAQV---------LSIPVVLVENSGRCSKN 240

Query: 245 EKDEKVLPNGIAWIPHLVETITAVVLKEGTKSIFVDKNLIAGPNPNQRGKLLIPFIVVLQ 304
           EKDEKVLPNGIAWIP+LVETIT VVL  G+KSIFVDK LI GPNPNQRGK+LIPFI VLQ
Sbjct: 241 EKDEKVLPNGIAWIPYLVETITKVVL-NGSKSIFVDKKLIEGPNPNQRGKMLIPFIFVLQ 300

Query: 305 YLFAVRPIERAIRSDILNESRPSWETHE 333
           YLF V+PI+RAIRSDIL +SRPSWE  E
Sbjct: 301 YLFVVKPIKRAIRSDILTQSRPSWELRE 304

[Close]

BLAST of CmoCh16G012840 vs. ExPASy TrEMBL
Match: A0A1S4DXD3 (Translocase of chloroplast OS=Cucumis melo OX=3656 GN=LOC107990978 PE=3 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 3.5e-138
Identity = 262/328 (79.88%), Postives = 279/328 (85.06%), Query Frame = 0


Query: 5   MASQVIREWIGINNFAMATQVKLLELLGRLKLEVIYSFLPICRGHESNVSTLTILVMGKG 64
           MASQVIREW+GINNFAMATQ KLLEL+G+LK E              NV+TLTILVMGKG
Sbjct: 1   MASQVIREWVGINNFAMATQAKLLELMGKLKQE--------------NVNTLTILVMGKG 60

Query: 65  GVGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGCINDQTL 124
           GVGKSSTVNSIIGER VSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGG INDQ L
Sbjct: 61  GVGKSSTVNSIIGERVVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGYINDQAL 120

Query: 125 EIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRALVVLTHAQFSP 184
           EIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAIT+SFGKAIW+RAL+VLTHAQFSP
Sbjct: 121 EIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITDSFGKAIWSRALIVLTHAQFSP 180

Query: 185 PDGVPYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIALNIPVVLVENSGRCNKN 244
           PDG+PY+EF SRRSEAL+KTVRFG S  K +IQ          LNIPVVLVENSGRC+KN
Sbjct: 181 PDGLPYDEFVSRRSEALVKTVRFGASFRKVEIQ---------GLNIPVVLVENSGRCSKN 240

Query: 245 EKDEKVLPNGIAWIPHLVETITAVVLKEGTKSIFVDKNLIAGPNPNQRGKLLIPFIVVLQ 304
           EKDEKVLPNGIAWIPHLVETIT VVLK G+KSIFVDK LI GPNPNQRGKLLIP I  LQ
Sbjct: 241 EKDEKVLPNGIAWIPHLVETITTVVLK-GSKSIFVDKTLIEGPNPNQRGKLLIPLIFALQ 300

Query: 305 YLFAVRPIERAIRSDILNESRPSWETHE 333
           Y F V+PI+RAIR DI  + RPSWE  +
Sbjct: 301 YFFVVKPIKRAIRRDIARQIRPSWELRD 304

[Close]

BLAST of CmoCh16G012840 vs. TAIR 10
Match: AT5G05000.2 (translocon at the outer envelope membrane of chloroplasts 34 )

HSP 1 Score: 384.4 bits (986), Expect = 9.2e-107
Identity = 191/327 (58.41%), Postives = 241/327 (73.70%), Query Frame = 0


Query: 6   ASQVIREWIGINNFAMATQVKLLELLGRLKLEVIYSFLPICRGHESNVSTLTILVMGKGG 65
           A Q +REWIGI  F  ATQ KLLE+LG+ K              E +VS+LT+LVMGKGG
Sbjct: 3   ALQTLREWIGIQQFPPATQSKLLEILGKYK--------------EEDVSSLTVLVMGKGG 62

Query: 66  VGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGCINDQTLE 125
           VGKSSTVNS+IGE+A +VS FQSE  RP +VSR+R+GFTLNIIDTPG+IEGG +NDQ + 
Sbjct: 63  VGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLIEGGYVNDQAIN 122

Query: 126 IIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRALVVLTHAQFSPP 185
           IIKRFLLN TID+LLYVDRLD YRVD+L++QV+ AIT++FGK IW ++ +VLTHAQFSPP
Sbjct: 123 IIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDAFGKEIWKKSALVLTHAQFSPP 182

Query: 186 DGVPYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIALNIPVVLVENSGRCNKNE 245
           DG+ Y  F S+RS ALLK ++ G    K+D+Q           +IPV+LVENSGRC+KNE
Sbjct: 183 DGLNYNHFVSKRSNALLKVIQTGAQLKKQDLQ---------GFSIPVILVENSGRCHKNE 242

Query: 246 KDEKVLPNGIAWIPHLVETITAVVLKEGTKSIFVDKNLIAGPNPNQRGKLLIPFIVVLQY 305
            DEK+LP G +WIP+L   IT +    G K+I VDK L+ GPNPN+RGK LIP +   QY
Sbjct: 243 SDEKILPCGTSWIPNLFNKITEISF-NGNKAIHVDKKLVEGPNPNERGKKLIPLMFAFQY 302

Query: 306 LFAVRPIERAIRSDILNESRPSWETHE 333
           L  ++P+ RAI+SD+  ES+P+WE  +
Sbjct: 303 LLVMKPLVRAIKSDVSRESKPAWELRD 305

[Close]

BLAST of CmoCh16G012840 vs. TAIR 10
Match: AT5G05000.3 (translocon at the outer envelope membrane of chloroplasts 34 )

HSP 1 Score: 384.4 bits (986), Expect = 9.2e-107
Identity = 191/327 (58.41%), Postives = 241/327 (73.70%), Query Frame = 0


Query: 6   ASQVIREWIGINNFAMATQVKLLELLGRLKLEVIYSFLPICRGHESNVSTLTILVMGKGG 65
           A Q +REWIGI  F  ATQ KLLE+LG+ K              E +VS+LT+LVMGKGG
Sbjct: 3   ALQTLREWIGIQQFPPATQSKLLEILGKYK--------------EEDVSSLTVLVMGKGG 62

Query: 66  VGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGCINDQTLE 125
           VGKSSTVNS+IGE+A +VS FQSE  RP +VSR+R+GFTLNIIDTPG+IEGG +NDQ + 
Sbjct: 63  VGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLIEGGYVNDQAIN 122

Query: 126 IIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRALVVLTHAQFSPP 185
           IIKRFLLN TID+LLYVDRLD YRVD+L++QV+ AIT++FGK IW ++ +VLTHAQFSPP
Sbjct: 123 IIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDAFGKEIWKKSALVLTHAQFSPP 182

Query: 186 DGVPYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIALNIPVVLVENSGRCNKNE 245
           DG+ Y  F S+RS ALLK ++ G    K+D+Q           +IPV+LVENSGRC+KNE
Sbjct: 183 DGLNYNHFVSKRSNALLKVIQTGAQLKKQDLQ---------GFSIPVILVENSGRCHKNE 242

Query: 246 KDEKVLPNGIAWIPHLVETITAVVLKEGTKSIFVDKNLIAGPNPNQRGKLLIPFIVVLQY 305
            DEK+LP G +WIP+L   IT +    G K+I VDK L+ GPNPN+RGK LIP +   QY
Sbjct: 243 SDEKILPCGTSWIPNLFNKITEISF-NGNKAIHVDKKLVEGPNPNERGKKLIPLMFAFQY 302

Query: 306 LFAVRPIERAIRSDILNESRPSWETHE 333
           L  ++P+ RAI+SD+  ES+P+WE  +
Sbjct: 303 LLVMKPLVRAIKSDVSRESKPAWELRD 305

[Close]

BLAST of CmoCh16G012840 vs. TAIR 10
Match: AT5G05000.1 (translocon at the outer envelope membrane of chloroplasts 34 )

HSP 1 Score: 384.4 bits (986), Expect = 9.2e-107
Identity = 191/327 (58.41%), Postives = 241/327 (73.70%), Query Frame = 0


Query: 6   ASQVIREWIGINNFAMATQVKLLELLGRLKLEVIYSFLPICRGHESNVSTLTILVMGKGG 65
           A Q +REWIGI  F  ATQ KLLE+LG+ K              E +VS+LT+LVMGKGG
Sbjct: 3   ALQTLREWIGIQQFPPATQSKLLEILGKYK--------------EEDVSSLTVLVMGKGG 62

Query: 66  VGKSSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGCINDQTLE 125
           VGKSSTVNS+IGE+A +VS FQSE  RP +VSR+R+GFTLNIIDTPG+IEGG +NDQ + 
Sbjct: 63  VGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLIEGGYVNDQAIN 122

Query: 126 IIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRALVVLTHAQFSPP 185
           IIKRFLLN TID+LLYVDRLD YRVD+L++QV+ AIT++FGK IW ++ +VLTHAQFSPP
Sbjct: 123 IIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDAFGKEIWKKSALVLTHAQFSPP 182

Query: 186 DGVPYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIALNIPVVLVENSGRCNKNE 245
           DG+ Y  F S+RS ALLK ++ G    K+D+Q           +IPV+LVENSGRC+KNE
Sbjct: 183 DGLNYNHFVSKRSNALLKVIQTGAQLKKQDLQ---------GFSIPVILVENSGRCHKNE 242

Query: 246 KDEKVLPNGIAWIPHLVETITAVVLKEGTKSIFVDKNLIAGPNPNQRGKLLIPFIVVLQY 305
            DEK+LP G +WIP+L   IT +    G K+I VDK L+ GPNPN+RGK LIP +   QY
Sbjct: 243 SDEKILPCGTSWIPNLFNKITEISF-NGNKAIHVDKKLVEGPNPNERGKKLIPLMFAFQY 302

Query: 306 LFAVRPIERAIRSDILNESRPSWETHE 333
           L  ++P+ RAI+SD+  ES+P+WE  +
Sbjct: 303 LLVMKPLVRAIKSDVSRESKPAWELRD 305

[Close]

BLAST of CmoCh16G012840 vs. TAIR 10
Match: AT1G02280.1 (translocon at the outer envelope membrane of chloroplasts 33 )

HSP 1 Score: 332.0 bits (850), Expect = 5.4e-91
Identity = 171/318 (53.77%), Postives = 225/318 (70.75%), Query Frame = 0


Query: 9   VIREWIGINNFAMATQVKLLELLGRLKLEVIYSFLPICRGHESNVSTLTILVMGKGGVGK 68
           ++REW+G   F  ATQ KL+E  G+LK              + +++++T+LV+GKGGVGK
Sbjct: 4   LVREWVGFQQFPAATQEKLIEFFGKLK--------------QKDMNSMTVLVLGKGGVGK 63

Query: 69  SSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGCINDQTLEIIK 128
           SSTVNS+IGE+ V VSPFQ+E  RPVMVSR+  GFT+NIIDTPG++E G +N Q LE+IK
Sbjct: 64  SSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIK 123

Query: 129 RFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRALVVLTHAQFSPPDGV 188
            FL+N+TID+LLYVDRLD YRVD L+KQV+ AIT +FGK IW + L+VLTHAQFSPPD +
Sbjct: 124 GFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPDEL 183

Query: 189 PYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIALNIPVVLVENSGRCNKNEKDE 248
            YE F S+RS++LLKT+R G    K++ + +          I VV  ENSGRC+KN+KDE
Sbjct: 184 SYETFSSKRSDSLLKTIRAGSKMRKQEFEDS---------AIAVVYAENSGRCSKNDKDE 243

Query: 249 KVLPNGIAWIPHLVETITAVVLKEGTKSIFVDKNLIAGPNPNQRGKLLIPFIVVLQYLFA 308
           K LPNG AWIP+LV+ IT V   +  K+I VDK ++ G   + +GK LIP I+  QYL  
Sbjct: 244 KALPNGEAWIPNLVKAITDVATNQ-RKAIHVDKKMVDGSYSDDKGKKLIPLIIGAQYLI- 296

Query: 309 VRPIERAIRSDILNESRP 327
           V+ I+ AIR+DI    +P
Sbjct: 304 VKMIQGAIRNDIKTSGKP 296

[Close]

BLAST of CmoCh16G012840 vs. TAIR 10
Match: AT1G02280.2 (translocon at the outer envelope membrane of chloroplasts 33 )

HSP 1 Score: 332.0 bits (850), Expect = 5.4e-91
Identity = 171/318 (53.77%), Postives = 225/318 (70.75%), Query Frame = 0


Query: 9   VIREWIGINNFAMATQVKLLELLGRLKLEVIYSFLPICRGHESNVSTLTILVMGKGGVGK 68
           ++REW+G   F  ATQ KL+E  G+LK              + +++++T+LV+GKGGVGK
Sbjct: 4   LVREWVGFQQFPAATQEKLIEFFGKLK--------------QKDMNSMTVLVLGKGGVGK 63

Query: 69  SSTVNSIIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGCINDQTLEIIK 128
           SSTVNS+IGE+ V VSPFQ+E  RPVMVSR+  GFT+NIIDTPG++E G +N Q LE+IK
Sbjct: 64  SSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIK 123

Query: 129 RFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITNSFGKAIWNRALVVLTHAQFSPPDGV 188
            FL+N+TID+LLYVDRLD YRVD L+KQV+ AIT +FGK IW + L+VLTHAQFSPPD +
Sbjct: 124 GFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPDEL 183

Query: 189 PYEEFFSRRSEALLKTVRFGPSSNKKDIQVAFAILFAIALNIPVVLVENSGRCNKNEKDE 248
            YE F S+RS++LLKT+R G    K++ + +          I VV  ENSGRC+KN+KDE
Sbjct: 184 SYETFSSKRSDSLLKTIRAGSKMRKQEFEDS---------AIAVVYAENSGRCSKNDKDE 243

Query: 249 KVLPNGIAWIPHLVETITAVVLKEGTKSIFVDKNLIAGPNPNQRGKLLIPFIVVLQYLFA 308
           K LPNG AWIP+LV+ IT V   +  K+I VDK ++ G   + +GK LIP I+  QYL  
Sbjct: 244 KALPNGEAWIPNLVKAITDVATNQ-RKAIHVDKKMVDGSYSDDKGKKLIPLIIGAQYLI- 296

Query: 309 VRPIERAIRSDILNESRP 327
           V+ I+ AIR+DI    +P
Sbjct: 304 VKMIQGAIRNDIKTSGKP 296

The following BLAST results are available for this feature:

BLAST of CmoCh16G012840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41009	1.8e-123	71.08	Translocase of chloroplast 34 OS=Pisum sativum OX=3888 GN=TOC34 PE=1 SV=1	[more]
Q38906	1.3e-105	58.41	Translocase of chloroplast 34, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O23680	7.6e-90	53.77	Translocase of chloroplast 33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9LUS2	1.0e-30	31.29	Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
A9SY65	1.4e-30	33.70	Translocase of chloroplast 108, chloroplastic OS=Physcomitrium patens OX=3218 GN...	[more]

BLAST of CmoCh16G012840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1Z3	4.7e-143	83.54	Translocase of chloroplast OS=Momordica charantia OX=3673 GN=LOC111007215 PE=3 S...	[more]
A0A5D3CLX1	6.4e-140	79.76	Translocase of chloroplast OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A5A7UCN3	1.4e-139	79.46	Translocase of chloroplast OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0L123	2.1e-138	80.79	Translocase of chloroplast OS=Cucumis sativus OX=3659 GN=Csa_3G002790 PE=3 SV=1	[more]
A0A1S4DXD3	3.5e-138	79.88	Translocase of chloroplast OS=Cucumis melo OX=3656 GN=LOC107990978 PE=3 SV=1	[more]

BLAST of CmoCh16G012840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05000.2	9.2e-107	58.41	translocon at the outer envelope membrane of chloroplasts 34	[more]
AT5G05000.3	9.2e-107	58.41	translocon at the outer envelope membrane of chloroplasts 34	[more]
AT5G05000.1	9.2e-107	58.41	translocon at the outer envelope membrane of chloroplasts 34	[more]
AT1G02280.1	5.4e-91	53.77	translocon at the outer envelope membrane of chloroplasts 33	[more]
AT1G02280.2	5.4e-91	53.77	translocon at the outer envelope membrane of chloroplasts 33	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005688	Chloroplast protein import component Toc34	TIGRFAM	TIGR00991	TIGR00991	coord: 5..331 e-value: 1.2E-151 score: 502.2
IPR005688	Chloroplast protein import component Toc34	PIRSF	PIRSF038134	Toc33/toc34	coord: 5..333 e-value: 1.0E-145 score: 482.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..295 e-value: 1.1E-67 score: 230.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 51..266
IPR006703	AIG1-type guanine nucleotide-binding (G) domain	PFAM	PF04548	AIG1	coord: 56..251 e-value: 1.3E-36 score: 125.9
IPR006703	AIG1-type guanine nucleotide-binding (G) domain	PROSITE	PS51720	G_AIG1	coord: 53..287 score: 36.160038
None	No IPR available	PIRSR	PIRSR038134-2	PIRSR038134-2	coord: 10..320 e-value: 1.0E-134 score: 445.8
None	No IPR available	PIRSR	PIRSR038134-1	PIRSR038134-1	coord: 10..320 e-value: 1.0E-134 score: 445.8
None	No IPR available	PIRSR	PIRSR006230-1	PIRSR006230-1	coord: 47..114 e-value: 8.8E-6 score: 22.9
None	No IPR available	PANTHER	PTHR10903:SF125	TRANSLOCASE OF CHLOROPLAST	coord: 5..328
IPR045058	GTPase GIMA/IAN/Toc	PANTHER	PTHR10903	GTPASE, IMAP FAMILY MEMBER-RELATED	coord: 5..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G012840.1	CmoCh16G012840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0071806	protein transmembrane transport
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0015450	protein-transporting ATPase activity