CmoCh16G012520 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G012520
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr16: 8928735 .. 8929835 (+)
RNA-Seq Expression	CmoCh16G012520
Synteny	CmoCh16G012520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAATCGGGTGCCCGATACTTTTATTGTGTGCTCCGTTAGTATTTGGTACCTGCGTCCAGCCAATCAGAGAAATCCACGTGTACGTTATTATTATTGTTTTCATCAATTTTTTCAACATTCTTTTACTCCTAAAAATTTACCCTAAATATATTTTTTTAGACAAAATTGTTTAAAATATCGTAACGACCCAGACCCAAATCCACCGTTAGTAAATATTGTCTTTGGGCTTTCCGCTTTAAAATACTTTTACTAGGAGAAGGTTTCACACTCTTGACAAGGTGATTTGTTACAAAATATTATCAGAGTTAGTCACTGGACGATGTGTCAGCCTTCTCGCTGTTCCCCGAAGGGAGTAGACACGAAGTGGTGTGCCAGTAAGAACGCTGGCCTCGAAGGAGGTGGATTGTGATGTCCCACATTGGTCGGGGAGGAGAACAAATCACGCTTTATAAGGTGTGAAAACCTTCCCCCATCAGATGCCTTTTAAAGTCGTGAGGGGAAGCCCAAAATGAAATGATAGGACAATATCCCCGAGTGATGGATCCGGGTCGTTACAAATATGTTACAAATATATTCGATATAGTTTATAACATTATTCATATAAATTAATATGATAATTGATAAAAATGGATTATATAACGATTTTTACAATATATTTTAAAAATAAAATAAAGGGTAAAAATCATTTTAATTTTTTATATAATTATAAATAATATTTTTTACTTACGAACTTACAGCTGCATTTCTCCTGGAACGCAATCGAAGCCCATGACGCTCTTAAACCATCCCTGCGGCGGCTCCGTCGCAGCCCCACTAATCTGGCTGATAATCAACGGAAACACAACCGGAATCAACACCGTCAACACAGACAACGAGCACAGTTCATAGAAACACCATCCCGCCATCTCCATAATCGACGGCTTTTCCCCATGCCCTTCGTACGCCCTATACACCTCCTTCGCCCTCTCCAGCTTCGCCGCCATGCTGTGAAAATCCGGCGTATCCTTCCGGCTTCCGCCGCTGCCCGACCTCGTCGTCGACGTGATCCGGCCGCTGCCAGATCTCGGCGGCGGTGCGCTCTGGATCTCCGATGA

mRNA sequence

ATGGCGAAAATCGGGTGCCCGATACTTTTATTGTGTGCTCCGTTAGTATTTGGTACCTGCGTCCAGCCAATCAGAGAAATCCACGTGTACCTGCATTTCTCCTGGAACGCAATCGAAGCCCATGACGCTCTTAAACCATCCCTGCGGCGGCTCCGTCGCAGCCCCACTAATCTGGCTGATAATCAACGGAAACACAACCGGAATCAACACCGTCAACACAGACAACGAGCACAGTTCATAGAAACACCATCCCGCCATCTCCATAATCGACGGCTTTTCCCCATGCCCTTCGTACGCCCTATACACCTCCTTCGCCCTCTCCAGCTTCGCCGCCATGCTGTGAAAATCCGGCGTATCCTTCCGGCTTCCGCCGCTGCCCGACCTCGTCGTCGACGTGATCCGGCCGCTGCCAGATCTCGGCGGCGGTGCGCTCTGGATCTCCGATGA

Coding sequence (CDS)

ATGGCGAAAATCGGGTGCCCGATACTTTTATTGTGTGCTCCGTTAGTATTTGGTACCTGCGTCCAGCCAATCAGAGAAATCCACGTGTACCTGCATTTCTCCTGGAACGCAATCGAAGCCCATGACGCTCTTAAACCATCCCTGCGGCGGCTCCGTCGCAGCCCCACTAATCTGGCTGATAATCAACGGAAACACAACCGGAATCAACACCGTCAACACAGACAACGAGCACAGTTCATAGAAACACCATCCCGCCATCTCCATAATCGACGGCTTTTCCCCATGCCCTTCGTACGCCCTATACACCTCCTTCGCCCTCTCCAGCTTCGCCGCCATGCTGTGAAAATCCGGCGTATCCTTCCGGCTTCCGCCGCTGCCCGACCTCGTCGTCGACGTGATCCGGCCGCTGCCAGATCTCGGCGGCGGTGCGCTCTGGATCTCCGATGA

Protein sequence

MAKIGCPILLLCAPLVFGTCVQPIREIHVYLHFSWNAIEAHDALKPSLRRLRRSPTNLADNQRKHNRNQHRQHRQRAQFIETPSRHLHNRRLFPMPFVRPIHLLRPLQLRRHAVKIRRILPASAAARPRRRRDPAAARSRRRCALDLR

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh16G012520 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh16G012520 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh16G012520 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G012520.1	CmoCh16G012520.1	mRNA