CmoCh16G012370 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G012370
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Survival motor neuron
Location	Cmo_Chr16: 8862872 .. 8869802 (+)
RNA-Seq Expression	CmoCh16G012370
Synteny	CmoCh16G012370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTAGATAGAGTGCACTGGGATGATTCCATGATTGTCAGAGCCATGGATGAAGCAATGTTGAAGTATAAGGTTATCCTTCTCTTTTTCTATCCATCTGGTAATTCTCCGTTTGCAGTATCCAGAAAGTGCTGTTTTGATTCGTCGGTATTGGTTTGTGTTAATTTTCTTTGAATTGTATGATTTGTGGCTTACATCTGATGAACTGTTGGCGTTTTTCAGACAATGCATGGATATGAAGTCCGCCGTGTTTCAGCCGAGGGAGGAGGCGTTTTTAAGGGTTGCGGTAAGAGTGACGAACCAAGAAGGTCCGTAGTTTTTTTGCCCTAGCGTTTTTCTCGTTTTTAGGCATCATCTATTGTATCTCTGAAAGTTGAAATGCTAATGCAATTATTTAACATTCCCTTTTTAAGGGTTTAGGGTGTGGATTCGAACCTTTAACCTTTGGGCGAGGTTTCCTTTAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCTTATAAGGGTGTTTCGTTCTCCTCCCCAATCGAGATCTCACAATCCACCCCCTTTGGGGCCCAACGTCCTTGCTTGCACTCGTTTCCTTCTCCAATCGATGTGACACCTCCCAATCCCCTGCCTCCCCTTTGGGGCTCAGCCTCCTCGCTAGCACATCGCCCGGTGTGTGGCTCTAATACCATTTGTAATAGCCCAAGCCCACCGCTTGCAGATATTGTCCTCTTTGGGCTTTCCCTTTTGGGCTTCTCCTCAAGTTTTTTAAAACGCGTCTACTGGGAGAGGTTTTCACACCCTTATAAGGGGTGTTTCGTTCTCCTCCCCAACCGTGATCTTCACAACCAGTTTATTATTTAAAGTTTTGTGATCATGGTATCCGACAATGTTCTGTTTTTGTTTGACTCTATGAGTTGAAATGCAAGTGAAAGCTTGGATGCTTGTTGTTTTTCGCATGGTTTCATAGCTATTTCCTTTTTTCTTTGACAATGTTAATGGGTTTTTGGATTGATTGACTTTGGCCTTTTGCACATTGGTTATTTGTTTGTGAAAACTTTGAAGTTGTATGGGGTGGCTACTAATTATTGAGTTTTTAACGGTGGTCTGTGGACCGGTCCTGTTTCTTTCAAATACTTGCCTAATTATTGATGCAATACCTTGCTACTAGGGTTAAAGCTGGCCGTTTGGAATGGAAAGAAATACTCTTTTGGGAGGATATATGTGAGATCCTACATCGGTTGGAGAGGGAAACGAAACATTTCTTATAAGGGCGTGGAAACCTCTCCCTAGTAGATGCATTTTAAAACCATGAGGTTAACGGCAATATGTAACAGGCCAAAGCAGACAATATTTGCTAGCAGTGGGCTTGGGCAGTTACGAATGGTATTAGAGCTAGACATTGGGTAGTGTGCCAATGAGGACGTTGGCCCTGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACAAAACATTTCTTATAAGAGTGTGGAAACCTCTCCTTAGTAGACGCGTTTTAAAACCAGCGCTATGTAACGGGCCAAAGCGGACAATATTTGCTAGTGGTGGGCTTGGGATAGGATCTTGCATGAGAATATGGAAGAAGAATTTTTCTTTAATTGCAAAGCTACGAGTCTTGCGAGCTATAAGTTACTCGACCCTGGTAGATAGTTGTTTTCCATCACCAAAAGAAGCACAGGAATTTTAAAAGATGCTTGAATGGTCGTCTTTTGATTTGATGCCTTGTCGTTTCATGCCATAACTAAAGGCGAACACTCACTCAAGAAATCGGGGGAGGGGATTAGTCACAGATATTTGATTGTTTTTCTAATCTTCTTCCCCCCTTCCCAAGTCAATAACTAGAAAAAAAAAATGGGAATACCAACGCATCCAGGAATAAACGATTGATCTCGATTAATAGACCCGCTAAAGCCCCGATTGAAGTTGTCAATATAAATATAATCGACTAATATGATGCAATTCGAAGGATTTTTCTGTCTTTCATTATTCCATAGAATTTTTTGATTTGGGATTTATATTTATGAATCGTATATGCTATATGGTGTTGTTTGACTGGTCTCAAAGAACATTGGATTTGGGATCCCAGGGAAGTTAAGGTCTTTGGCAACAATCTTGGACTCTCAATCTTTTCATAGGCAAGACTGAAATTCCTTGAAAATTGCATTTGTGGTGGGTGGCTCTTAAAACCCAGATCCACCGCTAACAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCTCTCAAGGCTATAAAACGCGTCTGTTAGGGGAAGGTTTCCACACCCTTATAAATGGTGTTTTGTTCTCCTCCCTAACCAATGTGGGACATCACACTAATGATCAAAGATTTTCTGCGTGTGAAAGTAAGGAAGAAATTGTGCCTTGAATACATTGCCTTTCGACCTGCAAAATGCGGGGCATTTACAGGTGCTTTGTTTGAAATTGGCTCTACAATATTCTGGAGGTGCGTGAACGATTTAGGGGTGCAATTTGTATCGGTCCAAGCCCACCACTAGCAAATATTGTCCTCTTTGGACTTTCCCTCAAGTTTTTTAAAACGCGTTTGTTAGGAAGAGGTTTCTACCACCTTATAAAGAATGCTTCGTTTCTCTCTCCAACTGATGTTGGATCTTACAATCCACCCCCTTCGGGGCCCAATGTCCTCGCTGACACTCTTCCTCTCTCCAATTGACGTGGGATCTCACACAATTGCTTTCAGGATGTAGAAGAATGGGAATGGTTGAAAGGTTGTTAGAACGGTTTCTTTGGCTGCTGTTACAAACACAACTTAGGTGAAACATTTTGAGAAAAAAGCAGTGATCTAGTAGAGATTCATGGTATTGTAACTTTCCATTTCAGTGTCATTCTTGTCCAATTGTGGAAGGGTCCTATAATTTGAGGAGGGCACATGCCCCCGCTGGCCCCAATATGATCTGCCCTTGCATGAATTCTTCTTTTGTCTTCTATTATCGTTTATGGGACGTTTTTTGGGACGCCCTGAGTGTCTTCTTTGAAGCTATCCCGCTTAATATTTTATTACTATCTCTTAAACTACTGCATCTTGAAAGAACAGGAGTGTAGATGAAGAGAGCTATATTGGAGCAAATGATGTTATGTTTGAAGTCAATGAGACTACAAATACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGCCGCCCTATATGTGAAAGAGACGGAACAGGAGACCGTTGAGGACTCCAATTTAAATCTAAAAGGTGAAGATGGCTATAACGAGCTACTCAAGCAGTATTACGAGCTTGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTTTATCAATGTGGTGCTGGTGGTTGGAACTACCAGGATGTCGGTGCAGGGTCTGACATTGGAAATCAATGGGGAACATCTGCTGCTTATCAAGAACACCCAGTCTCTGCAAGCCAACCTTCTCTTAACCAGACAATACCGTCTTACTCGCCCTCCAGTTATCCAATTTCAGCTGGTATGTGATATCAATTTTCTATTTGTTCCTTGTTTGGAATGGCTGTTGGGCAAAAGTGTTACCCATTATTCACTCATTGGCTACAGGTCCTCAAAGTTCGTCCCATGCTGATGGTGACATAATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATATCGTCCATAAAGACTGTAAATAAAGGTTGGCATGATTTTATGGAGCCTGAATGAATCTCTTCAGATTATCTGCATTTCTTTTTATTCTATGATTGAAGATTCCTTTTATGTATGCTCTGATGACATAGATGTTTTGAACAAGTAACAAAATTTGTATTAGAAAAAACATCATGAACATGATGTTCACTAGAAAACATGAACTAGAGGCAACAAAATATGTCAAAGGGGGCATGAAAATACCTCCCCCCCCAGAATCAATACAAAGCAAAATTGTAACGACCCAGATCCACCGCTAGCAGATATTGTCTTCTTTGGGCTTTCCCTTTCGGACTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGAGGAAGGTTTCCTCACCCTTATAAAGAGTGTTTTGTTCTCCTCCCCAACCAATGTAGGACATCACAATCCACCCCCCTTCGGGGCCAAGCGTCCTCGTTGGCACTCATTCTTTTCTCCAATCGATGTGGGACCACCACCAAATCCACCTCCCTTTGGGGCCCAGCATCCTTACTGGCACACCACCTCGTGTCTATCCCCCTTTGGGGAACAGCGAGAAGGCTGGCACATCGTCCGGTGTCTGGCTCTGATACCATTTGTAACGACCCAGATCCACCACTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCGTCTACTAGGGGAAGATTTCCACACCCTTATAAAGGGTAGTTTGTTCTCCTCCCCAACCAATGGTATCAGAGCCAGACACCGGACGATGTGCCAGCCTTCTCATTGTTCCCCGAAGGGGGTAGACACAAGACGATGTGCTAGTAAGGACGCTGGCCCCAAAGGGGGGTGGATTTGGAGGGGGTCCCACATCGATTGGAGAAAGGAACGAGTGCCAGCGAGGACGCTGGGCCCCGAAGGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAAATACCCTTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGAGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGAATCTGGATCGTTACAAAAACAAAGCTAATGAAAGAAATTATAATGGCTCTTCTCTTCTCTTCTCTGCTAAAACTATACAATAAAAAGATGATAAAGTGTATGTCCCTTTGGACGTTTGTATCTAAGGACTTTGTTATTACTCGTTATGTTTTGTTCTTTTGCATTAGATTCCCTTTCAAGGTTTGTTCTTGTCTGGCTCCTACTAGGTTGTTGTTTTTGCACACCCTCGTGTTGTCCTTGTTTAGTCATGTGCCCCTCGTGTCATATTCGCTTAATGATTATGTGATGAGAATGGACCAAACCACTTGATGCTCATTGTACGATATTGGAACATGTATATTGCTGCAAGCCATCATTTTACCAGTTTCTATATGGTCATCTAGCACATTTCATTTCTATATGATTCTTTAGCTTTAGATAAGATTATAGGGACTTCATGTTTACTGGTTGAGATGTCTAGGTTTTTGTAACAAATGGTGACAGAAAACGTACTAATGAACTTCCCATTAGGCTTTCCTTTACATTGTCTATGTACTTCACGTTTTCATCTTATCCTTTTTAAAACCATCTCTATGCCTAATTGTAACGGTTTATTGTTAGATCCCACATTGGTTGGTTGAGGAGGAGAACAAAACACCTTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACGTGTTTTAAAAACCTTGAGGGAAAGTCTGAAAGGTTGAGCCCAAGGAGAACAATATTGGCTAGCAGTCGGCTTGGGGCCGCTACACTAATCCGCCAAAGGAATAGGGGTTGGGCTTTAAGTTGCATGATTTGATACCTTGTGACATTTTTGTTTCTTTTTAATCAGTTCACATAGAGAAAGAAAGCGAGGGACATGATGGGATAATGCCTCAAAGGGGTGCTAGCTCTGAAACAGACCTTACTACTGTGTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAGTGAGTTCTGCTTAGTTTCATTCTCGCTCAAGACATGCGTTATATATTTCTTCTTGTCCACAGCTGTTTCATATTTTATAGTATCTTCCTTCTTTGAAAGAAACACAAAAAGGCCTTCATTTCAAAATTTAATGTGCAGTTTCCTTGACTGAAGTGTTTGTTTGTTTGTTATATGCTGAAATGAAATGCAAGTATTCAGTTCTCTCAAAACTAGATCTGTTTTGCAGATACCTTGTGGAGCAATCTCAGGCCAAGAAATGATGAACACCAGGCTCATCTTACCAATTTCCCCCACTTTTGATACCCACCCATGGCATATGTGTGCTATGAGTTTGAATTTTGATCTAAATGAGTTTGAATTTGGCTCTGATCAAACTATAGTTCAACTAGTTAAGACATATATTCTCGACCAAGAGGTAAGTTTGTTCAATCTTTTCATTCCACGTGTTGTTGACCCATAAATAGAACTCTGATCAAACTATAGTTCAACTGGTTAAGACATATATTCTCGACCAAGAGGTAAGATGTTCAATCTTTTCATTCCACGCGTTGTCGACCCATAAATAGAACTCTGATCAAACTATAGTTCAACTGGTTAAGATATATATTCTCGACCAAGAGGTAAGATGTACAAATCTTTTCATTCCACGTGTTGTTGAATGAAAAAAACATAATCAAAGTGGAGCTATGTCAATTGAGCTATACCTTCTCGAGCTAAGTGGGGCTTATATGAAAAGGTTAGATATGTGATCTATTCTTTTACGTGTCGCAGCTAGACCATTCAAATTTTGACAACATAATTTGATGTGATTTTATTTGTATTTTAAAATGGTCGTTTTTTGTGACTTCTCCCCAAGTACACTATAATTCGATCTCTAAGCGGATAGAACATGTAACCAACAATAAAATTGATCTAAATGTTAATTTACTAATTTATAATTAGTGTATCAATCTAAATTCTAAATTATAAAGTAAATATTATAGAAGAATTAAATTATTTTAATTTTGAATTAGTTGGAGAATTGGGTGGCTTGATTCAATGAAAGTCCACAAACTTCCACGTCATTGGCCGTGGAGTAGGGCGGCGGCGGCGGCGATTGCAGCTTGCCTGAGAAGAATCGTGGAGGGGCTACCCGCAAGAGAGGCCGTTAGGCGATTTTCGGAAAGTTAG

mRNA sequence

ATGGAGCTAGATAGAGTGCACTGGGATGATTCCATGATTGTCAGAGCCATGGATGAAGCAATGTTGAAGTATAAGGTTATCCTTCTCTTTTTCTATCCATCTGGTAATTCTCCGTTTGCAGTATCCAGAAAGTGCTGTTTTGATTCGTCGGTATTGACAATGCATGGATATGAAGTCCGCCGTGTTTCAGCCGAGGGAGGAGGCGTTTTTAAGGGTTGCGGTAAGAGTGACGAACCAAGAAGGAGTGTAGATGAAGAGAGCTATATTGGAGCAAATGATGTTATGTTTGAAGTCAATGAGACTACAAATACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGCCGCCCTATATGTGAAAGAGACGGAACAGGAGACCGTTGAGGACTCCAATTTAAATCTAAAAGGTGAAGATGGCTATAACGAGCTACTCAAGCAGTATTACGAGCTTGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTTTATCAATGTGGTGCTGGTGGTTGGAACTACCAGGATGTCGGTGCAGGGTCTGACATTGGAAATCAATGGGGAACATCTGCTGCTTATCAAGAACACCCAGTCTCTGCAAGCCAACCTTCTCTTAACCAGACAATACCGTCTTACTCGCCCTCCAGTTATCCAATTTCAGCTGGTCCTCAAAGTTCGTCCCATGCTGATGGTGACATAATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATATCGTCCATAAAGACTGTAAATAAAGTTCACATAGAGAAAGAAAGCGAGGGACATGATGGGATAATGCCTCAAAGGGGTGCTAGCTCTGAAACAGACCTTACTACTGTGTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAATTGGAGAATTGGGTGGCTTGATTCAATGAAAGTCCACAAACTTCCACGTCATTGGCCGTGGAGTAGGGCGGCGGCGGCGGCGATTGCAGCTTGCCTGAGAAGAATCGTGGAGGGGCTACCCGCAAGAGAGGCCGTTAGGCGATTTTCGGAAAGTTAG

Coding sequence (CDS)

ATGGAGCTAGATAGAGTGCACTGGGATGATTCCATGATTGTCAGAGCCATGGATGAAGCAATGTTGAAGTATAAGGTTATCCTTCTCTTTTTCTATCCATCTGGTAATTCTCCGTTTGCAGTATCCAGAAAGTGCTGTTTTGATTCGTCGGTATTGACAATGCATGGATATGAAGTCCGCCGTGTTTCAGCCGAGGGAGGAGGCGTTTTTAAGGGTTGCGGTAAGAGTGACGAACCAAGAAGGAGTGTAGATGAAGAGAGCTATATTGGAGCAAATGATGTTATGTTTGAAGTCAATGAGACTACAAATACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGCCGCCCTATATGTGAAAGAGACGGAACAGGAGACCGTTGAGGACTCCAATTTAAATCTAAAAGGTGAAGATGGCTATAACGAGCTACTCAAGCAGTATTACGAGCTTGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTTTATCAATGTGGTGCTGGTGGTTGGAACTACCAGGATGTCGGTGCAGGGTCTGACATTGGAAATCAATGGGGAACATCTGCTGCTTATCAAGAACACCCAGTCTCTGCAAGCCAACCTTCTCTTAACCAGACAATACCGTCTTACTCGCCCTCCAGTTATCCAATTTCAGCTGGTCCTCAAAGTTCGTCCCATGCTGATGGTGACATAATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATATCGTCCATAAAGACTGTAAATAAAGTTCACATAGAGAAAGAAAGCGAGGGACATGATGGGATAATGCCTCAAAGGGGTGCTAGCTCTGAAACAGACCTTACTACTGTGTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAATTGGAGAATTGGGTGGCTTGATTCAATGAAAGTCCACAAACTTCCACGTCATTGGCCGTGGAGTAGGGCGGCGGCGGCGGCGATTGCAGCTTGCCTGAGAAGAATCGTGGAGGGGCTACCCGCAAGAGAGGCCGTTAGGCGATTTTCGGAAAGTTAG

Protein sequence

MELDRVHWDDSMIVRAMDEAMLKYKVILLFFYPSGNSPFAVSRKCCFDSSVLTMHGYEVRRVSAEGGGVFKGCGKSDEPRRSVDEESYIGANDVMFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTGNWRIGWLDSMKVHKLPRHWPWSRAAAAAIAACLRRIVEGLPAREAVRRFSES

Homology

[Close]

BLAST of CmoCh16G012370 vs. ExPASy TrEMBL
Match: A0A6J1E6W0 (uncharacterized protein LOC111431235 OS=Cucurbita moschata OX=3662 GN=LOC111431235 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 3.3e-147
Identity = 273/304 (89.80%), Postives = 275/304 (90.46%), Query Frame = 0


Query: 1   MELDRVHWDDSMIVRAMDEAMLKYKVILLFFYPSGNSPFAVSRKCCFDSSVLTMHGYEVR 60
           MELDRVHWDDSMIVRAMDEAMLKYK                           TMHGYEVR
Sbjct: 1   MELDRVHWDDSMIVRAMDEAMLKYK---------------------------TMHGYEVR 60

Query: 61  RVSAEGGGVFKGCGKSDEPRRSVDEESYIGANDVMFEVNETTNTSEAKENISVEPCPISC 120
           RVSAEGGGVFKGCGKSDEPRRSVDEESYIGANDVMFEVNETTNTSEAKENISVEPCPISC
Sbjct: 61  RVSAEGGGVFKGCGKSDEPRRSVDEESYIGANDVMFEVNETTNTSEAKENISVEPCPISC 120

Query: 121 TDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWN 180
           TDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWN
Sbjct: 121 TDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWN 180

Query: 181 YQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDI 240
           YQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDI
Sbjct: 181 YQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDI 240

Query: 241 IKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTG 300
           IKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTG
Sbjct: 241 IKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTG 277

Query: 301 NWRI 305
            + +
Sbjct: 301 KYLV 277

[Close]

BLAST of CmoCh16G012370 vs. ExPASy TrEMBL
Match: A0A6J1HK48 (uncharacterized protein LOC111465241 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465241 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 8.0e-141
Identity = 260/304 (85.53%), Postives = 270/304 (88.82%), Query Frame = 0


Query: 1   MELDRVHWDDSMIVRAMDEAMLKYKVILLFFYPSGNSPFAVSRKCCFDSSVLTMHGYEVR 60
           MELDR++WDDSMIV+AMDEAMLKYK                           TMHGY++R
Sbjct: 1   MELDRMYWDDSMIVKAMDEAMLKYK---------------------------TMHGYDIR 60

Query: 61  RVSAEGGGVFKGCGKSDEPRRSVDEESYIGANDVMFEVNETTNTSEAKENISVEPCPISC 120
           RVSAEGGGVF GCGKSDEPRRSVDEESYIGANDVMFEVNET NTSEAKENISVEPCPISC
Sbjct: 61  RVSAEGGGVFNGCGKSDEPRRSVDEESYIGANDVMFEVNETKNTSEAKENISVEPCPISC 120

Query: 121 TDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWN 180
           TDFSAALYVKETEQET+EDSNLNL+GEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWN
Sbjct: 121 TDFSAALYVKETEQETIEDSNLNLRGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWN 180

Query: 181 YQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDI 240
           YQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ IPSY PSSYPISAGPQSSS ADGDI
Sbjct: 181 YQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQAIPSYPPSSYPISAGPQSSSLADGDI 240

Query: 241 IKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTG 300
           IKTAMDSAARAISS+KTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTG
Sbjct: 241 IKTAMDSAARAISSMKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTG 277

Query: 301 NWRI 305
            + +
Sbjct: 301 KYLV 277

[Close]

BLAST of CmoCh16G012370 vs. ExPASy TrEMBL
Match: A0A6J1HLH3 (uncharacterized protein LOC111465241 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465241 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.4e-140
Identity = 260/300 (86.67%), Postives = 268/300 (89.33%), Query Frame = 0


Query: 1   MELDRVHWDDSMIVRAMDEAMLKYKVILLFFYPSGNSPFAVSRKCCFDSSVLTMHGYEVR 60
           MELDR++WDDSMIV+AMDEAMLKYK                           TMHGY++R
Sbjct: 1   MELDRMYWDDSMIVKAMDEAMLKYK---------------------------TMHGYDIR 60

Query: 61  RVSAEGGGVFKGCGKSDEPRRSVDEESYIGANDVMFEVNETTNTSEAKENISVEPCPISC 120
           RVSAEGGGVF GCGKSDEPRRSVDEESYIGANDVMFEVNET NTSEAKENISVEPCPISC
Sbjct: 61  RVSAEGGGVFNGCGKSDEPRRSVDEESYIGANDVMFEVNETKNTSEAKENISVEPCPISC 120

Query: 121 TDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWN 180
           TDFSAALYVKETEQET+EDSNLNL+GEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWN
Sbjct: 121 TDFSAALYVKETEQETIEDSNLNLRGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWN 180

Query: 181 YQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDI 240
           YQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ IPSY PSSYPISAGPQSSS ADGDI
Sbjct: 181 YQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQAIPSYPPSSYPISAGPQSSSLADGDI 240

Query: 241 IKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTG 300
           IKTAMDSAARAISS+KTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTG
Sbjct: 241 IKTAMDSAARAISSMKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTG 273

[Close]

BLAST of CmoCh16G012370 vs. ExPASy TrEMBL
Match: A0A1S3BL18 (uncharacterized protein LOC103490751 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490751 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 5.4e-97
Identity = 205/303 (67.66%), Postives = 227/303 (74.92%), Query Frame = 0


Query: 1   MELDRVHWDDSMIVRAMDEAMLKYKVILLFFYPSGNSPFAVSRKCCFDSSVLTMHGYEVR 60
           M LD+++WD+SMIV+AMDEAMLKYK+                           MHG+EV 
Sbjct: 1   MGLDKMYWDNSMIVKAMDEAMLKYKI---------------------------MHGHEVP 60

Query: 61  RVSAEGGGVFKGCGKSDEPRRSVDEESYIGANDVMFEVNETTNTSEAKENISVEPCPISC 120
            VSAEGGGV   CGKSDE +RSVDEESY G N+V FEV ETT+T EAKENI VE   I+C
Sbjct: 61  CVSAEGGGVVNDCGKSDELKRSVDEESYNGENNVEFEVEETTSTLEAKENIGVE-LSIAC 120

Query: 121 TDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWN 180
           TDFS AL+V+ET++E VEDS+L     + YN LLKQYYELEEKRQKVLEQLYQCGAGGWN
Sbjct: 121 TDFSDALHVEETQEEPVEDSDL-----EEYNHLLKQYYELEEKRQKVLEQLYQCGAGGWN 180

Query: 181 YQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDI 240
           YQDV AGSD+G QWGTSAA QEHPVSASQPS    IPSY P+ YPI AGPQSSS  D DI
Sbjct: 181 YQDVNAGSDVGTQWGTSAANQEHPVSASQPSHYPEIPSYLPTGYPILAGPQSSSLVDDDI 240

Query: 241 IKTAMDSAARAI-SSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYT 300
           IKTAMDSA RAI SS+KTVNKV   KES+ HD IMPQ G SSETDL TVLNAWYSAGFYT
Sbjct: 241 IKTAMDSATRAISSSLKTVNKV---KESDRHDEIMPQSGDSSETDLATVLNAWYSAGFYT 267

Query: 301 GNW 303
           G +
Sbjct: 301 GKY 267

[Close]

BLAST of CmoCh16G012370 vs. ExPASy TrEMBL
Match: A0A0A0L6D7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008290 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 3.0e-95
Identity = 200/305 (65.57%), Postives = 231/305 (75.74%), Query Frame = 0


Query: 1   MELDRVHWDDSMIVRAMDEAMLKYKVILLFFYPSGNSPFAVSRKCCFDSSVLTMHGYEVR 60
           M LD+++WDDSMIV+AMDEAM KYK+                           MHG+EV 
Sbjct: 1   MGLDKMYWDDSMIVKAMDEAMWKYKI---------------------------MHGHEVP 60

Query: 61  RVSAEGGGVFKGCGKSDEPRRSVDEESYIGANDVMFEVNETTNTSEAKENISVEPCPISC 120
           RVS+EGGGV  GCGKSDE +RSVDEESYIG N+V F V ETT+T EAKENI VEP  ++C
Sbjct: 61  RVSSEGGGVVNGCGKSDELKRSVDEESYIGENNVEFGVEETTSTLEAKENIGVEP-SMAC 120

Query: 121 TDFSAALY--VKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGG 180
           TDFS AL+  V+ET++E VEDSNLNLKGE+ YN LLKQYYELEEKRQK+LEQLYQCGAGG
Sbjct: 121 TDFSDALHVEVEETQEEPVEDSNLNLKGEE-YNRLLKQYYELEEKRQKILEQLYQCGAGG 180

Query: 181 WNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADG 240
           WNYQ+V AGS++G QWG  AA QEHPVSASQPS    +PSY P+SYPI  GPQS+S  DG
Sbjct: 181 WNYQNVNAGSNVGTQWGAYAANQEHPVSASQPSYYPAMPSYLPTSYPIVVGPQSTSLDDG 240

Query: 241 DIIKTAMDSAARAI-SSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGF 300
           DIIKTAMDSA RAI SS++TVNK    KES+  DGIM + G SS+TDL TVLNAWYSAGF
Sbjct: 241 DIIKTAMDSATRAISSSMETVNK---GKESDRDDGIMRRSGDSSQTDLATVLNAWYSAGF 273

Query: 301 YTGNW 303
           +TG +
Sbjct: 301 HTGKY 273

The following BLAST results are available for this feature:

BLAST of CmoCh16G012370 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh16G012370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6W0	3.3e-147	89.80	uncharacterized protein LOC111431235 OS=Cucurbita moschata OX=3662 GN=LOC1114312...	[more]
A0A6J1HK48	8.0e-141	85.53	uncharacterized protein LOC111465241 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HLH3	1.4e-140	86.67	uncharacterized protein LOC111465241 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3BL18	5.4e-97	67.66	uncharacterized protein LOC103490751 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0L6D7	3.0e-95	65.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008290 PE=4 SV=1	[more]

BLAST of CmoCh16G012370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 150..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..236
IPR040424	Survival motor neuron-like protein 1	PANTHER	PTHR39267	SURVIVAL MOTOR NEURON-LIKE PROTEIN 1	coord: 2..301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G012370.1	CmoCh16G012370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus