CmoCh16G012190 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G012190
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	PLATZ transcription factor family protein
Location	Cmo_Chr16: 8737820 .. 8740398 (+)
RNA-Seq Expression	CmoCh16G012190
Synteny	CmoCh16G012190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGTGGAGTTTGGTTCGGAAGTCGACATTGTGAGGATAAGAACGACCCCTTTCTCTCTCTAACGCCATCTACCACTCTACAAGAAGAACCCATTCTCCCCCTCACCGCCTCCACTCTTCTGAAAGATTCATCTCTCTCTCTCTCTCTCCTCTTTTTCTCTCTCTAGAACCGGCCAAAAACTCTCTCTCACTCTGTTTTCGTTTTTTTTTTTGACAAATTTCAAGCTGGCGATCGAAAACCACGATAATACTGTCCGTGAAATCAAGCCCAAGAGCAGAAGAATCATGGTATGACGCTTTTTAGGCAGTTTTTTTTTCTACTATTTCAATTTCCCGCATTCGTTTTCCCTCGCTTTTCTTCATCGGGTTGTTGATTTTTGCCTGTTTGATCTTCTGGGTTTTGCTTTGTTTTCGATTTTTTCATTTGGGTATTGCTTAGTTTCGATTTTCTCATATGGATTTCGAATTTTCTGGCTTCACTTTCCCGCATTCTGTTCTTCATTCACTGTTCCTCTGTTCTTGTCATCTGGGTTTGCGCTTTAGTTCGATTCTCCCTTCTGGGTATTGATTTTCTTCTGTTTTCTCATCTGGGTTTTGCTTAGTTTAACACTTTTTCATTTGGGTATTGCTTGTTTTTCGATTTCGGGCTTCGATTTTTCTGATTTGACTTCCCGCATTCTGTTCTTCCTTCACTGTTCCTCTGTTCTTGTCATCTGGGTTTGTGTTTTAGTTCGATTCTCCCTTCTGGGTATTGATTTTCTGATATTTTCTCATCTGGGTTTTGTTTATTTTTGTATTTTCTCATCTGGGTTTTGCTTATTTTTGGATTTTCTCATCTGGGTTTTGCTTATTTTTGGATTTTCTCATCCGGGCTTCGATTTTTCTGATTTGACTTTCCCGCATTCTGTTTTTCCTTCACTGTTTCTTAGTTTTTCTCATATGGGTATGGCTTTAACCTCGATTTTAGCATCTGGGTATTGATTTTCTTCTGTTTTCTCATCTGGGTTTTGCTTATTTTCCTGTTTTTTCATTTGGGTATTGCTTAGTTTTCGATTGTTTTCCTCTGCTCTTGACATTGTTCTTGATGATCTCTGTTTCAACAGGGTGCTGGAGGTCCTGATGATGAAGACAACCGATGGCCGCCATGGCTAAAACCTCTACTAAGAGAAACCTTCTTCGTTCAATGCAAACACCACATCGATTCCCACAAAAGCGAATGCAATATGTACTGTTTAGACTGTATGAACGGCGCTCTCTGTTCTCTTTGCCTCAACTTTCACAAAGATCATCGTGCCATTCAGGTCTTGAACTCTCCCCCCATTTTTTCACCTAAATCCAAACCCTAATTTCCCCGTTTTTCTAATCAAATTCTTTGTTTCTTACAGATTCGAAGGTCTTCTTACCATGATGTGATCAGAGTTTCTGAGATTCAAAAGGTTTTGGACATTTCTGGTGTCCAAACTTACATTATCAACAGCGCTAGAGTCGTGTTCTTGAACGAAAGGCCTCAGCCGCGTCCTGGCAAAGGCGTCACGAACACTTGTGAAGTCTGTGAACGCAGCCTCCTTGATTCCTTTCGATTCTGTTCCCTTGGCTGCAAGGTATTGTTCTGTCTGGTTTCCTGGAAAATCAGTGGGAACATCAGTGGGAAAATTTAGAAAAAACCCATTTGAAATAGCCCCCAATGAAGGCGTTTCTTTCTTGTTTGGATGCTGAGAAAATTGGTGGGAAAATGAAGGAAAATCCAAATGGAAATTCGTGTCATCAATGTGTTTGTTTGACTGGACTCTTAATTTTCTCGGAAACCAAACAAGTCAGAAAGAGGCTTCCCATTTGTCAATCCTCTGTAACCTGATTTTGATTTTGCAGATAGTCGGGACATCGAGGAGTTTCCAGAAGAAGAGGGTGGCGGGAGTAGTGGGTATGGCGGGTGTCGCCGCCACAATGGCGGTATCGGACTCGGAGGACTCGTACAGTAGTAGCAATCACAGGCGGAGCAAGAGCAACAACAGCCACAACAGCAACAAATTTCAGAGTTTTAGTCCTTCGACGCCGCCTCCGACATCAATTAACTATAGGACGGCAAAACGGAGGAAGGGAATCCCACATCGAGCTCCGATGGGAGGGCTAGTTTTAGAATATTAGTATTATTACTTTCTCTTAATTACTCTTAAGACCCCTGAAATGTAATGTAATTGCCACGATGCTCCTCTCCGATGCCTGAAGCTTTGTGAAAGAGGCCGGTGTTGGAGGCTTACTTTTAGAGCTTTACTTTTAGAGCTTTGTATATAGAAGAAGCATAGATATGGGGAAGAAGAAGGAAAAAAATAAGGCAAATGTGAAAATATGTGAAATTTAGAGGACTAAAAGGAAAAATAAGTTTGGTAGGTTTAAGTAATTATATGAAATAGGTTGGGGTTATAGGGAATTATACTAAGTTTTGGGGTGAAGTTGTAAATATTGGGTGGGATTTTTCTCTTTCTTATGCTTATTAGATGTCTTGATGAAGATATAATGGAAAATGATGTTTATATGTAAAATTAAATGAAAATAAAATATATTGTATTATTTCTTTTCTC

mRNA sequence

GGTGTGGAGTTTGGTTCGGAAGTCGACATTGTGAGGATAAGAACGACCCCTTTCTCTCTCTAACGCCATCTACCACTCTACAAGAAGAACCCATTCTCCCCCTCACCGCCTCCACTCTTCTGAAAGATTCATCTCTCTCTCTCTCTCTCCTCTTTTTCTCTCTCTAGAACCGGCCAAAAACTCTCTCTCACTCTGTTTTCGTTTTTTTTTTTGACAAATTTCAAGCTGGCGATCGAAAACCACGATAATACTGTCCGTGAAATCAAGCCCAAGAGCAGAAGAATCATGGGTGCTGGAGGTCCTGATGATGAAGACAACCGATGGCCGCCATGGCTAAAACCTCTACTAAGAGAAACCTTCTTCGTTCAATGCAAACACCACATCGATTCCCACAAAAGCGAATGCAATATGTACTGTTTAGACTGTATGAACGGCGCTCTCTGTTCTCTTTGCCTCAACTTTCACAAAGATCATCGTGCCATTCAGATTCGAAGGTCTTCTTACCATGATGTGATCAGAGTTTCTGAGATTCAAAAGGTTTTGGACATTTCTGGTGTCCAAACTTACATTATCAACAGCGCTAGAGTCGTGTTCTTGAACGAAAGGCCTCAGCCGCGTCCTGGCAAAGGCGTCACGAACACTTGTGAAGTCTGTGAACGCAGCCTCCTTGATTCCTTTCGATTCTGTTCCCTTGGCTGCAAGATAGTCGGGACATCGAGGAGTTTCCAGAAGAAGAGGGTGGCGGGAGTAGTGGGTATGGCGGGTGTCGCCGCCACAATGGCGGTATCGGACTCGGAGGACTCGTACAGTAGTAGCAATCACAGGCGGAGCAAGAGCAACAACAGCCACAACAGCAACAAATTTCAGAGTTTTAGTCCTTCGACGCCGCCTCCGACATCAATTAACTATAGGACGGCAAAACGGAGGAAGGGAATCCCACATCGAGCTCCGATGGGAGGGCTAGTTTTAGAATATTAGTATTATTACTTTCTCTTAATTACTCTTAAGACCCCTGAAATGTAATGTAATTGCCACGATGCTCCTCTCCGATGCCTGAAGCTTTGTGAAAGAGGCCGGTGTTGGAGGCTTACTTTTAGAGCTTTACTTTTAGAGCTTTGTATATAGAAGAAGCATAGATATGGGGAAGAAGAAGGAAAAAAATAAGGCAAATGTGAAAATATGTGAAATTTAGAGGACTAAAAGGAAAAATAAGTTTGGTAGGTTTAAGTAATTATATGAAATAGGTTGGGGTTATAGGGAATTATACTAAGTTTTGGGGTGAAGTTGTAAATATTGGGTGGGATTTTTCTCTTTCTTATGCTTATTAGATGTCTTGATGAAGATATAATGGAAAATGATGTTTATATGTAAAATTAAATGAAAATAAAATATATTGTATTATTTCTTTTCTC

Coding sequence (CDS)

ATGGGTGCTGGAGGTCCTGATGATGAAGACAACCGATGGCCGCCATGGCTAAAACCTCTACTAAGAGAAACCTTCTTCGTTCAATGCAAACACCACATCGATTCCCACAAAAGCGAATGCAATATGTACTGTTTAGACTGTATGAACGGCGCTCTCTGTTCTCTTTGCCTCAACTTTCACAAAGATCATCGTGCCATTCAGATTCGAAGGTCTTCTTACCATGATGTGATCAGAGTTTCTGAGATTCAAAAGGTTTTGGACATTTCTGGTGTCCAAACTTACATTATCAACAGCGCTAGAGTCGTGTTCTTGAACGAAAGGCCTCAGCCGCGTCCTGGCAAAGGCGTCACGAACACTTGTGAAGTCTGTGAACGCAGCCTCCTTGATTCCTTTCGATTCTGTTCCCTTGGCTGCAAGATAGTCGGGACATCGAGGAGTTTCCAGAAGAAGAGGGTGGCGGGAGTAGTGGGTATGGCGGGTGTCGCCGCCACAATGGCGGTATCGGACTCGGAGGACTCGTACAGTAGTAGCAATCACAGGCGGAGCAAGAGCAACAACAGCCACAACAGCAACAAATTTCAGAGTTTTAGTCCTTCGACGCCGCCTCCGACATCAATTAACTATAGGACGGCAAAACGGAGGAAGGGAATCCCACATCGAGCTCCGATGGGAGGGCTAGTTTTAGAATATTAG

Protein sequence

MGAGGPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFHKDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSRSFQKKRVAGVVGMAGVAATMAVSDSEDSYSSSNHRRSKSNNSHNSNKFQSFSPSTPPPTSINYRTAKRRKGIPHRAPMGGLVLEY

Homology

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BLAST of CmoCh16G012190 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.9e-31
Identity = 63/127 (49.61%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 14  PPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFHKDHRAIQIRRSSY 73
           P WL  L  E FFV C +H  + K+E N+ CLDC   +LC  C+  H+ HR +Q+RR  Y
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCT-SLCPHCVPSHRFHRLLQVRRYVY 65

Query: 74  HDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRF 133
           HDV+R+ ++QK++D S VQ Y INSA+VVF+ +RPQ R  KG  N C  C+RSL + +  
Sbjct: 66  HDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEPYIH 125

Query: 134 CSLGCKI 141
           CSLGCK+
Sbjct: 126 CSLGCKV 131

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BLAST of CmoCh16G012190 vs. ExPASy TrEMBL
Match: A0A6J1E6F5 (uncharacterized protein LOC111431038 OS=Cucurbita moschata OX=3662 GN=LOC111431038 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.0e-130
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MGAGGPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFH 60
           MGAGGPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFH
Sbjct: 1   MGAGGPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSRSFQKKRVAGVVGMAGVAATMAVSDSEDSYSSSNHR 180
           EVCERSLLDSFRFCSLGCKIVGTSRSFQKKRVAGVVGMAGVAATMAVSDSEDSYSSSNHR
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSRSFQKKRVAGVVGMAGVAATMAVSDSEDSYSSSNHR 180

Query: 181 RSKSNNSHNSNKFQSFSPSTPPPTSINYRTAKRRKGIPHRAPMGGLVLEY 231
           RSKSNNSHNSNKFQSFSPSTPPPTSINYRTAKRRKGIPHRAPMGGLVLEY
Sbjct: 181 RSKSNNSHNSNKFQSFSPSTPPPTSINYRTAKRRKGIPHRAPMGGLVLEY 230

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BLAST of CmoCh16G012190 vs. ExPASy TrEMBL
Match: A0A6J1HQK4 (uncharacterized protein LOC111465191 OS=Cucurbita maxima OX=3661 GN=LOC111465191 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.7e-123
Identity = 224/236 (94.92%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 1   MGAGGPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFH 60
           MGAGGPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFH
Sbjct: 1   MGAGGPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSRSFQKKRVAGVVGMAGVAATMAVSDSEDSYSSSNHR 180
           EVCERSLLDSFRFCSLGCKIVGTSR+FQKKRVA   G AGVAATMAVSDSEDSYSSSNHR
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSRNFQKKRVA---GEAGVAATMAVSDSEDSYSSSNHR 180

Query: 181 RSKSNNSHN------SNKFQSFSPSTPPPTSINYRTAKRRKGIPHRAPMGGLVLEY 231
           RSKSNNSHN      SNKFQSFSPSTPPPTS+NYRTAKRRKGIPHRAPMGGLVLEY
Sbjct: 181 RSKSNNSHNSHNSHSSNKFQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVLEY 233

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BLAST of CmoCh16G012190 vs. ExPASy TrEMBL
Match: A0A6J1CW01 (uncharacterized protein LOC111014906 OS=Momordica charantia OX=3673 GN=LOC111014906 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 9.2e-114
Identity = 206/230 (89.57%), Postives = 211/230 (91.74%), Query Frame = 0


Query: 1   MGAGGPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFH 60
           MGAGGPDDEDNRWPPWLKPLLRE+FFVQCK HIDSHKSECNMYCLDCMNGALCSLCL +H
Sbjct: 1   MGAGGPDDEDNRWPPWLKPLLRESFFVQCKLHIDSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSRSFQKKRVAGVVGMAGVAATMAVSDSEDSYSSSNHR 180
           EVCERSLLDSFRFCSLGCKIVGTSR F KKRVA V       A MA SDSE SYSSSNHR
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSRGFPKKRVAAV-------AAMAASDSEGSYSSSNHR 180

Query: 181 RSKSNNSHNSNKFQSFSPSTPPPTSINYRTAKRRKGIPHRAPMGGLVLEY 231
           RS SNN+ NSNK  SFSPSTPPPTS+NYRTAKRRKGIPHRAPMGGLV+EY
Sbjct: 181 RSNSNNNSNSNKVHSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIEY 223

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BLAST of CmoCh16G012190 vs. ExPASy TrEMBL
Match: A0A0A0L185 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009510 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.6e-113
Identity = 209/228 (91.67%), Postives = 213/228 (93.42%), Query Frame = 0


Query: 5   GPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFHKDHR 64
           GPDDEDNRWPPWLKPLLRE+FFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFHKDHR
Sbjct: 2   GPDDEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFHKDHR 61

Query: 65  AIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE 124
           AIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE
Sbjct: 62  AIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE 121

Query: 125 RSLLDSFRFCSLGCKIVGTSRSFQKKRVAGVVGMAGVAATMAVSDSEDSY-SSSNHRRSK 184
           RSLLDSFRFCSLGCKIVGTSRS+QKKRVA           MA SDSEDSY SSSNHRRSK
Sbjct: 122 RSLLDSFRFCSLGCKIVGTSRSYQKKRVA-----------MAASDSEDSYSSSSNHRRSK 181

Query: 185 SNNS-HNSNKFQSFSPSTPPPTSINYRTAKRRKGIPHRAPMGGLVLEY 231
           SNNS +NSNK QSFSPSTPPPTS+NYRTAKRRKGIPHRAPMGGLVLEY
Sbjct: 182 SNNSNNNSNKIQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVLEY 218

[Close]

BLAST of CmoCh16G012190 vs. ExPASy TrEMBL
Match: A0A1S3CNY3 (uncharacterized protein LOC103503124 OS=Cucumis melo OX=3656 GN=LOC103503124 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.1e-113
Identity = 209/228 (91.67%), Postives = 213/228 (93.42%), Query Frame = 0


Query: 5   GPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFHKDHR 64
           GPDDEDNRWPPWLKPLLRE+FFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFHKDHR
Sbjct: 2   GPDDEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFHKDHR 61

Query: 65  AIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE 124
           AIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE
Sbjct: 62  AIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE 121

Query: 125 RSLLDSFRFCSLGCKIVGTSRSFQKKRVAGVVGMAGVAATMAVSDSEDSY-SSSNHRRSK 184
           RSLLDSFRFCSLGCKIVGTSRSFQKKRVA           MA SDSEDSY SSSNH+RSK
Sbjct: 122 RSLLDSFRFCSLGCKIVGTSRSFQKKRVA-----------MAASDSEDSYSSSSNHKRSK 181

Query: 185 SNNS-HNSNKFQSFSPSTPPPTSINYRTAKRRKGIPHRAPMGGLVLEY 231
           SNNS +NSNK QSFSPSTPPPTS+NYRTAKRRKGIPHRAPMGGLVLEY
Sbjct: 182 SNNSNNNSNKVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVLEY 218

[Close]

BLAST of CmoCh16G012190 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 308.5 bits (789), Expect = 4.4e-84
Identity = 157/227 (69.16%), Postives = 181/227 (79.74%), Query Frame = 0


Query: 5   GPDDEDNR-WPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFHKDH 64
           G ++E N+ +P WLKPLLRE FFVQCK H DSHKSECNMYCLDC NG LCSLCL+FHKDH
Sbjct: 2   GAEEETNKTYPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDH 61

Query: 65  RAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVC 124
            AIQIRRSSYHDVIRVSEIQK LDI+GVQTY+INSA+VVFLNERPQPRPGKGV NTCEVC
Sbjct: 62  HAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVC 121

Query: 125 ERSLLDSFRFCSLGCKIVGTSRSFQKKRVAGVVGMAGVAATMAVSDSEDSYSSSNHRRSK 184
            RSL+DSFRFCSLGCKI G S+  +K+             T  +SDS+DSYSS++  R K
Sbjct: 122 YRSLVDSFRFCSLGCKISGISKKKRKE------------WTNNLSDSDDSYSSTSIGRLK 181

Query: 185 SNNSHNSNKFQSFSPSTPPPTSINYRTAKRRKGIPHRAPMGGLVLEY 231
            N+   +N   SF+PSTPP +++N R AKRRKGIPHRAP GGL++EY
Sbjct: 182 KNDDIMNN---SFTPSTPPLSAVNRRIAKRRKGIPHRAPFGGLIIEY 213

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BLAST of CmoCh16G012190 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 305.8 bits (782), Expect = 2.9e-83
Identity = 156/226 (69.03%), Postives = 174/226 (76.99%), Query Frame = 0


Query: 1   MGAGGPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFH 60
           MGAGGP++E+NRWPPWLKPLL+E FFV CK H DSHKSECNMYCLDC NG LCSLCL  H
Sbjct: 21  MGAGGPEEEENRWPPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHH 80

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHR IQIRRSSYHDVIRV+EIQK LDI G+QTY+INSA+VVFLNERPQPRPGKGVTNTC
Sbjct: 81  KDHRTIQIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTC 140

Query: 121 EVCERSLL-DSFRFCSLGCKIVGTSRSFQKKRVAGVVGMAGVAATMAVSDSEDSYSSSNH 180
           +VC RSL+ DSFRFCSLGCKI GTSR F+K R               + ++EDS SS   
Sbjct: 141 KVCYRSLVDDSFRFCSLGCKIAGTSRGFEKGR------------ENLLMETEDSSSSIAI 200

Query: 181 RRSKSNNSHNSNKFQSFSPSTPP-PTSINYRTAKRRKGIPHRAPMG 225
            ++ +N        QSFSPSTPP  TS N R  KRRKGIPHR+PMG
Sbjct: 201 GKNITN-------LQSFSPSTPPLTTSSNCRIVKRRKGIPHRSPMG 227

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BLAST of CmoCh16G012190 vs. TAIR 10
Match: AT1G32700.2 (PLATZ transcription factor family protein )

HSP 1 Score: 250.4 bits (638), Expect = 1.4e-66
Identity = 130/189 (68.78%), Postives = 150/189 (79.37%), Query Frame = 0


Query: 42  MYCLDCMNGALCSLCLNFHKDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARV 101
           MYCLDC NG LCSLCL+FHKDH AIQIRRSSYHDVIRVSEIQK LDI+GVQTY+INSA+V
Sbjct: 1   MYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKV 60

Query: 102 VFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSRSFQKKRVAGVVGMAGV 161
           VFLNERPQPRPGKGV NTCEVC RSL+DSFRFCSLGCKI G S+  +K+           
Sbjct: 61  VFLNERPQPRPGKGVINTCEVCYRSLVDSFRFCSLGCKISGISKKKRKE----------- 120

Query: 162 AATMAVSDSEDSYSSSNHRRSKSNNSHNSNKFQSFSPSTPPPTSINYRTAKRRKGIPHRA 221
             T  +SDS+DSYSS++  R K N+   +N   SF+PSTPP +++N R AKRRKGIPHRA
Sbjct: 121 -WTNNLSDSDDSYSSTSIGRLKKNDDIMNN---SFTPSTPPLSAVNRRIAKRRKGIPHRA 174

Query: 222 PMGGLVLEY 231
           P GGL++EY
Sbjct: 181 PFGGLIIEY 174

[Close]

BLAST of CmoCh16G012190 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 231.9 bits (590), Expect = 5.3e-61
Identity = 124/242 (51.24%), Postives = 156/242 (64.46%), Query Frame = 0


Query: 7   DDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFHKDHRAI 66
           ++ED   PPWL P+LR ++FV C  H+DS+K+ECN++CLDC   A CS CL  HKDHR +
Sbjct: 9   EEEDYTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVV 68

Query: 67  QIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 126
           QIRRSSYH+V+RV+EIQK +DI+ VQTYIINSA++VFLNERPQPR GKGVTNTCE+C RS
Sbjct: 69  QIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRS 128

Query: 127 LLDSFRFCSLGCKIVGTSR-----SFQKKRVAGVVGMAGVAATMAVSDSE---------- 186
           LLDSFRFCSLGCK+ G  R     +F  K   G   + G  +  A + ++          
Sbjct: 129 LLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMRKTNAFNRL 188

Query: 187 -----------DSYSSSNHRRSKSNNSHNSNKFQSFSPSTPPPTSINYRTAKRRKGIPHR 223
                      D Y  +  +RS S+         SFSP TPP    N+R + RRKG+PHR
Sbjct: 189 MSGLSISTVRFDDYGPNGDQRSSSSGDEGG---FSFSPGTPP--IYNHRNSSRRKGVPHR 245

[Close]

BLAST of CmoCh16G012190 vs. TAIR 10
Match: AT1G21000.2 (PLATZ transcription factor family protein )

HSP 1 Score: 231.9 bits (590), Expect = 5.3e-61
Identity = 124/242 (51.24%), Postives = 156/242 (64.46%), Query Frame = 0


Query: 7   DDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFHKDHRAI 66
           ++ED   PPWL P+LR ++FV C  H+DS+K+ECN++CLDC   A CS CL  HKDHR +
Sbjct: 6   EEEDYTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVV 65

Query: 67  QIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 126
           QIRRSSYH+V+RV+EIQK +DI+ VQTYIINSA++VFLNERPQPR GKGVTNTCE+C RS
Sbjct: 66  QIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRS 125

Query: 127 LLDSFRFCSLGCKIVGTSR-----SFQKKRVAGVVGMAGVAATMAVSDSE---------- 186
           LLDSFRFCSLGCK+ G  R     +F  K   G   + G  +  A + ++          
Sbjct: 126 LLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMRKTNAFNRL 185

Query: 187 -----------DSYSSSNHRRSKSNNSHNSNKFQSFSPSTPPPTSINYRTAKRRKGIPHR 223
                      D Y  +  +RS S+         SFSP TPP    N+R + RRKG+PHR
Sbjct: 186 MSGLSISTVRFDDYGPNGDQRSSSSGDEGG---FSFSPGTPP--IYNHRNSSRRKGVPHR 242

The following BLAST results are available for this feature:

BLAST of CmoCh16G012190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	1.9e-31	49.61	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CmoCh16G012190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6F5	7.0e-130	100.00	uncharacterized protein LOC111431038 OS=Cucurbita moschata OX=3662 GN=LOC1114310...	[more]
A0A6J1HQK4	1.7e-123	94.92	uncharacterized protein LOC111465191 OS=Cucurbita maxima OX=3661 GN=LOC111465191...	[more]
A0A6J1CW01	9.2e-114	89.57	uncharacterized protein LOC111014906 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A0A0L185	1.6e-113	91.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009510 PE=4 SV=1	[more]
A0A1S3CNY3	2.1e-113	91.67	uncharacterized protein LOC103503124 OS=Cucumis melo OX=3656 GN=LOC103503124 PE=...	[more]

BLAST of CmoCh16G012190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32700.1	4.4e-84	69.16	PLATZ transcription factor family protein	[more]
AT4G17900.1	2.9e-83	69.03	PLATZ transcription factor family protein	[more]
AT1G32700.2	1.4e-66	68.78	PLATZ transcription factor family protein	[more]
AT1G21000.1	5.3e-61	51.24	PLATZ transcription factor family protein	[more]
AT1G21000.2	5.3e-61	51.24	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 69..140 e-value: 2.5E-30 score: 104.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..207
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..226
None	No IPR available	PANTHER	PTHR31065:SF64	SUBFAMILY NOT NAMED	coord: 1..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G012190.1	CmoCh16G012190.1	mRNA