CmoCh16G012140 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G012140
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	glycine-rich cell wall structural protein 1.8-like
Location	Cmo_Chr16: 8675885 .. 8684945 (-)
RNA-Seq Expression	CmoCh16G012140
Synteny	CmoCh16G012140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATCACTAGAGTCTTGTGCCTTAGCTTTCTTCTCCTTGTAGGGCTGGGTTTAGCTTCCGCTGCCCGAACCCTTCTTGATTATGATCCCCGAACACGTCACTATGGTTACGATCGCCCTAACCCTAGAGAAGGGTACGATTCGGGGCATCGTGACGAATCCTATGATAATGCATATGGTGGAAGATCGGGTGGAGGATATGGAGACGGAAGCTCTGCTCTCGGAGGTTCAGGCTATGGAAGTGGTGGAGTAAGGGGTTCGGGATATGGTAACGGTGGAGGAAATGCATACGGAGGAGGGGTTAGCTCCGGCGTAGGAGGAGCAGGATATGGAAGTGGGAGTAGATATGGAGGTGGAGAAGATCATGGTGTTGGTTACGCTGGTGGGCGAAGTGGAGGTTATGAAAATGGAGGCAATGGTGGGTATGGGCAAGGAAGAGATCATGATATCGGCTATGGAAGTAGAAATGGAAATGGAAATGGAAATGGAAATGGGTATGGAGATTCCCATGGATATGGAAATGGTGGAGGAGTCGACGGTGGGTATGGAAGGGGAGACGGAGTAGGAAGCCATGCTGGTGGTTCTGGCATTGGCGCCGGCGGTGGTTACGGAGGCCATGCTGGTGGCTCTGGAATTGGGGCCGGCGGAGCTTACGGCAGTGGAGGAGCTCACGGAGGAGAACATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGACGGTGGATATGCACTCACAAACTCCATCTCAAACAAGAACTGAAACCCTTTTTAAGTAATGAACCCAATATTCATTATGTTAACAAAATAAAGAAATTGGGTTAGAGAATGTTGTTTTCTATATCGATGTCCAAACCGCTTTCAATGAATGTCAAATTCGAATCAACTGTTCAATGATAAAACAAAATTTGGATTACATTGGTATGGAGCAAATTGATTCAATCATACTTATTTTTGTTGAGATATGATTCAAAATGAAGATATGATTCAGAGGAGTAGGGATATGATTCAAATATTCAAACTATGAGATTTTTAGGAGATTGTTAGCAGATTTAAATTATTTCTGGATTTCGATGATTTACTATTTTTGGTCCAGTGTATAAACTATAAATACTGGAATTGTGTAAGCCTCTAGGTATTGAGTCTGTAGACAATAATAAAGCACCGTAGCTTTCATCTATTCCTATCCATTCCTATCTCTTTCACTATCCCTCTTTCCAACAATTTTGGTATCAGAGCCAAGTTCGTTCGACACGAGGGTGAGTGATTATTTTCTTTTCTAAAACAAAAATGGCAGTAGCTGGTTTTCTTTCTTTGCACCGTTGTTGCCAATCTTTAATGGTGAGAAGTATGAGTGGTGGAGCATCAAGATGAAGACCTTGCTCAGATCGCAGGAGCTATGGGACTTGGTGGAGTACGGGTTCGTTGATATATCAGAACCCACAATTGAAGAAGAGGAGACACTAAGGGAAACCAAGAAAAATGATGTCAACGCTCTATTCATTATTCAGCAAGCAGTTCATGAGACTATCTTTTCACGAATTGCAGCAGCAACCACATCAAAGCAAGCATGGTCAATTCTACTGAAGGAGTTTCAGGGAGATTCAAAAGTCATAACAGTGAAATTGCAATCTTTAAGACGTGATTTTGAAACTCTGCTCATGATGAATGGCGAATCAATTGCTGATTTTTTGTCCAGAACAATGGCAATAGTCAATTAGATGCGTACCTATGGAGAGAAAATTTCAGACGAAACAATTGTTGCAAAGGTGTTGAGGAGCTTGACTCCAAACTTTGACCATGTGGTGACTACCATAGAAGAAGCTACTAAGGATCTATCAATACTCCCCGTTGATGAACTGATGGGTTTGCTTCAGGCTCATGAGTCAAGAATCAATAAATCATCAGAAAGGAATGAAGAAAAGACACTACAAGTGGAGACAGACAACAACGAAGGTAACGAAAGAGAAAATATAGAAAAGGCACTACAAGTGGAGACAACCAACAACGAAGGGAACAAAAGAGAAAATATAGAAAAGGCACTACAAGTGGAGACAGCCAACAACGAAGGCAACGAAAAAGAAAATGTTTGTTTAGCAAGTAGAAGTTGTGGAAGAGAAGGATTTCGCAGCTTCCATGGCGATCGTGATAACAGGTGGAGAAGTGATGGACAGAAACAATTCAATGAACAAAGGAATGTCATACAATGTTACCATTGTAGAAGGTATGGTCACACAAAATATGATTGTTGGTATAAAAATCAACTAATGAATTTTGCAGCAGAGAATGGAGAAAAAGAAAAGTTGTTTATGGCATGCATGGATACGAATCCAGAAGAAGGTAACTTATGGTTTGTTGATAGCGGATGCTCGAACCATATGACAGACATCAAATCTTTATTCCAAGAGCTTGATGAGACGCAAAGAATCAAGGTGCAACTTGGAAATAAAAAAGAGATGCAAGTTAAGGAAAAAGACACGGTGAACGTCAAAACCAGTCATGACCCTATGAATTATGAAGAAGCAACTGAAAAAGAAGACGGGAAGAAAGCCTTGACAGTAGAGATGCAGTCCTTTAAGAAAGATGAAACATGGGATATGGTTGACCTACCAAACGAAAAGTTCTATGGAGATTTACAAGAAGAAGTTTATGTAACACCGCCAGAGGGATTCATAAAGGAAGACAAAGAAACAAAGGTATACAAGCTGAGACAGACATTGTACGGGTTAAAGCAGACATACTTACGAAGGCCTTGTCAGAAGAAAAGCTCTGTACTTACGTCTACAACTTTGAATCATGGGGGAGTGTTGAGATATGATTCAAAATGAAGATATGATTCAAAATGAATATATGATTCAGAGTAGTAGAGATATGATTCAAATATTCAAACTATGAGATTTTTAGGAGATTGTTAGGAGATTTAAATTCTTTCTAGATTTTGATGATTTACTATTTTTGGTCCAGTGTATAAGCTATAAATACTGTAATTGTGTAAGCCTCTAGGTATTGAGTCCGTAGACAATAATAAAGCACGGTAGCTTTCATCTATTCCTATCTATTCCTATCTCTTTCACTATCCCTCTTTCCAACAATTTTCACTTTGTTTATCAGCGCAACTCAAAATCTAAGGTTAATTTTAAAGGGAAGTATTAGGTTGTATGAGTCCTTAAGCTTACTAAAAATAGTTATTAATGTGAAGAAGTTTAGGAGTGATTAGTGTTTTAACCTCAAAAAAAAAAAAAAAAAATTAGGAAACTAGTTGTGATTTCTCCCTATAAATAATACTCATGACATGTATGCTCTTTACAACCATAACTAAGAGATTGAAAAGCTAAGTGTTTAACGTTTCTTTGTTTCAAAAGATCTCTCCCCTTAAGTTGTTCTTTTTTATTTTTTATTTGTTTCAACCTATTTCGATCGATGCTCATATCCAACATTTGGTATCAGAGTCAAGATGCCGAAAAAATTTTGTCACCTTACAAAGTCATCGGAGGAGAAGTGAAAACAATAAGGAGCGGAAGGGAGGGGAGTGTAACACTCCAAAACCTATGACACACGAAGAGTAACTACATAACATGGTCGATAAAATTGGGTGTTGACTTACAGGCACAAGGCTTATGGGATATCGTCGAGAATGTTGACGTTAAGGAGCGTAACGACAAGATGACTCTTGCCACCATCTATCAAGTAGTCTTGGAGGACGTACTTCTCATGTTGGCAGAGAAGGACTCGGCAAAGACAGCGTGGGAGGCACTGCAAACAATGCATGTGGGTGTGAAACGTGTCAAGGAAGCAAAGGTGCAAACCTTGAAGAGTGAGTTCGAGGCTACCTGCATGAAGGACAGTTAGTCAATAGACGGATTTTTCATGAAGTTGACGACGATCGTCAGCGGCATCCGTTCATTACGCAACGTGGTGGAGGAGATCTCCGTCATCAAAAAGTTCCTTCAAGCAGTTCCCCCAAGATTCATGCAGATTTTTGCCTCCATCGAGCAATTCGGTGACCTCAAGAACATATCAGTTGAGAAGGTCATTGGCCATCTTAAGGTCCATGCGGAAAGACTTCGTGGCTACAAAGACAAGAGGAGGAGAAATACCTCTTACTCACACATGAGGAGTGGCTCGCACAGACGAGAAAGAAAGATACAATGATTCTTCTTTTTCACGTACGAGGGGACGTGGGAGCCATAACAAGAAAAACATAGGTCGTGGACGTGGTTGCAGACATGACAGTGGACATGGTGGTAGAGTTGGTCGTGACAATACCTCACAAATTCATGACAATGTCAAGTCCCGGAAGGACAAGAGTATGATCAAGTGTTACTCTTGTGGAAAATACGAACATTATGCGGTAGAATGCCACAACAATGAGCGCGATGAGGAGGCAAACCTCATGATCACGGATGATGAAGAGCCCACATTGATGTTGACCGAGAATATACTCAACCTGTTGGTGCTCAATAAAGAAGGTTATGCGAACCCCTTCATAGATGGAGAAGACTAAGTGGAGACCAGCATGTGGTACCTAGACAATGGAGCGAGCAACCACATGACCGGAGATTGAGCAAAGTTCAAGGAGCTTGATCAGAAGTTCACTAGAAACGTGAAGTTTTGCGAAGGATCAATTGTACCGGTCCAAGACAAAGGGTCTATCTTGTTCCAGTGTAAGAACGACCATCAATGTCTATTAACTAAGGTGTATTACATCCCGAGTTGAAGAGCAATATTATTAGCCTTGGTCATTGACAACAGAAACGTTCCTCAAAAATATTATTAGAGTGAAGATAGTCGACTCGTTCCTCGAGATATACAACAAAAACGGTGTTGATGAAGGTACAACGGTTGCAAAACTGCCTGTATAAGATACTATTGAAAGACCATCAACATCTTCCAAAAGTATCCATTGGCGTTGACAAAAAGAAAGTGAAGAAGAAACCAATGGGTCAGGAGAAAAAGGAATCGAAAAACATAGCCAAGAAGAAACCAGAGGCTACTACAATCAGTAAAGAACAACCTAGCCATGTAGGCCTAGAGAAAGGCCACCAAGGCGTAAGAAAAATGGGACATCAAACTTGTCCTCTCAACCAAAGAAGGCTAGAGACATGTATAAAAATAAGGTTGAAAGACAAAGGAGTATCCTACAAAACGAAGAAGTCCCTACACATAAGAGAGAACGGAAGAAATTGTATGTTGTAGAATTAAAATTTCTTATGAAGAATAAGGAGTTGATCAGGGACCAAGCAACGTTGAAACTATAGAACAACATGCAAATATTCTCACCAAGACCCTAGCAAAGATTAAGTTTGCAAACATGCCGGAGTTATTCAAAGTAAAAAATCTCAAGTAAAGTCAAGCTTACGGGGGAGAATGTGAGTGATTAATCTTGACTTTGTAAAAATAGTTATTAAGTTGAATAAGTTTAGAAAATAGTTAGTCAATTGAGAGTGGTTTTAACTTAGGGGAGAGTTTAGGAAACTAGTTGTTCTTTCTTAACTGTAAATATTGATGAGATGTATGCTATTTACAACCACACAAAGAATTAAAAAACTAAGTGATTCACGTTTCATTGTTTCAAAATATCTCTCCCCTCAAGTTTTTCTTTTTTAGTTTTTTATTTATTTTGACATTTCAATCGTAGGCCATATTCAACGGGTTGAAGGTATTTGAGTAGGTAAAATGTTTGTTTAGAATCAAAGATCATTTTCAAAGAACATTTTATAAGAAACTTGAAATATACTTAGATTTGACCGAGAAGTAAAATAATAATACTCCAAACACAATAATATTTCTTGACTAGGAAATTATGATTCAAAGACTTTAATTTAGAAGTCTTTAAAATTGATATGAGAAATCTGATTCAAAATTTAGACTTTGAGCTCTAGTATGTATTGGTGAAAAGAAACTATATGATATATTAACTAAGTATGAGATTTTCTTTTATCGTAACAAAGGATTAAGTTTAGACAACCAAAAGATTGAAAGAAAGCAACAATGAGCTTCTCCCTTGGACATGGAGGAGTTACCCAAGATGACCTTTTAATTATGATTGGGGCTAATAGGCGAACGTAGGCATGTTTGGGGGAGGCCACATGTCGCACATAGAAAAACGAGGGGAAAACCTTGTGTGTTGCCTCCGACTAGTCTCAGAGTGTGGACGAGCGCACAGTGAATGGGACATGTGTCTTGTTCTTATAAGATATCTATAAATTCGTTTGAGATACGTATGCTAGGATTCGAAAAAAAGAATATCAAGGACTATGCATTTGGACCCGCTCCTAGCAGGTGAGCATGAAACCTTCGTGTAAGAGTTTTTTCAATCGCATGTGATGCCCCTGAAGGGTTAATTTTGCCCATTTGATTCGACCTTCATTTGACTGTTTTCGGATCATTTTGAATAATAAACTTATTATAACTTGAATTAGGGTCCGCTAGTGAAATTGTGAAATTGTGGAGCACCGGGCAAGCAGGAAACGAGAGTGAGTAAGGCATGCACGACTAAGTAAGTAGCCATTTGAATTTTCTTGAGCAGTACTTATATGAATCGCTGGAATGTGATAGCACTAAAAATGCATGTTTAGGGTATAGAATTGAGTTAAAATTTTAAGTAGGCTATAAATGATACCCACAAATATTTGAAATGTCTTAAGAATGAGATTTTTAATTTGTATATTGTGTGAGATGTTTTCGTTCGATTAGTTACTCTATAATGAGATTGAAATTTGTACTCAAGGTGATTGATTGAATTATCTCCTTATTGAGTTAACAGGTATGTTTTGAGAATGAGATATGTACTCCAAGTGATGGATTTAGTTATCTTCCTGTTAAGCATGTATGTACACTTTGAGAATGTGATTTGTACTCTAATGCTTAATTGAGTTATATGCTTAATTGAGTTATCTCCTTATTTGAGCATGCATGAATGTATTGAGTTAAGAATAAGATGCTATAGTTATGACAGTTTGACGATTAACCTAGGTCAAGATACCTCTAGTAGACCGAGCACCCCAAGATCATTAGCAATGATCAGAGGTCTAGACCCTAGTGCTCTGAGAACCAGATTAACCCCAATCAGCTAATCTAGTAAATCTGCAACGCTAGAAAATGTGAACAACTATCTAACTTCGATTGAGTTTGTGACAAGCAAGAGAATGACTCAAGATTTCAAGGCCTCCTAAAAATTTATATAGGTGTAGAACCTAAGCCTAAAATACCTTAAGCCTAATTACAATACATGAAACTCATACCTTAGCTTTGTAAATATCATGTCTACAAGTTTGACGAAGAAATCTCAAGATAAGACGTAGAATGTTTGGACGACTCTCACTTTTAGTTTCTCGTAGGTCGAAACGTGCAACTCTAACCCTTTTCTATGGTAGAAGATGATGTCATGGTTGGTTCAGTTGAACTAGACACCCATGATTCAATTTATCCTGTATCAAATCTTTCCACTATTGTAGTTTTTTTTAGATCATTTTTACCATGGAAGAAAATGATTACTTGGGAGCATTAAGATTCTAAAATTTTATCTATAATGACAAAGTACATCACTCTTAATATCTTAAATACTATGATATTTTTTTATTATTTTTTTTTTTAATGCAAATGAGATTTAATATCCTTAAAATGTGATGATTTATTCCACCATTATAGTACTCCCAATGAGAGATTATTTAATGTAGTTTGTTCAAGTGGGAATTAGGGAAACATGCATAAATGATATGTAAAAGATATTATAGTAATGGAATATCGTTTCATAACCCATTTCATGTCTTAAATCTCATGGCGGCTCAAGTAGCAAAAAAGAAAAAGAGCCTAATTAAATAAATGTTCTTTATGTAGTGGATTTTTATAGCCATTGTGAATTTAATCATACAAATATCTTCCTAAAACTAAATAAATTATCAACCTTAACTAATGCGAAGCAAGAAGAAATGATAAAACTAAAGTAAGTAGTGAACCATAGATATTACTTTTAAGTTTATCTTTGCTCTTTCTCTAAATCTTACTAAATCTTGCAAGATCTTTCAAATGAAAGATGACATCAAAGCCTTATGTGAATATTCATATGATTTACTTCAAATCTAATGTGTGAGCCAAATAGGAGAAAAGGCACACTATAGTGCTTGCTTCATCGACATTTGTGGAGATACATATCCAAATTGTTTTTTATTTCCCCATGTGGCGCCCTCTTTACCAGTAAGCACACCCATGAGAAGATGATGAACCCTCCACCATTTCCTATATAAGATGACCAATGGATTCATTCTAGGCATCCTCAAATTCTCTCCATGGCTATCACTAGAGTCTTGTGCCTTAGCTTTCTTCTCCTTGTAGGGCTGGGTTTAGCTTCCGCTGCCCGAACCCTTCTTGATTATGATCCCCGAACACGTCACTATGGTTACGATCGCCCTAACCCTAGAGAAGGGTACGATTCGGGGCATCGTGACGAATCCTATGATAATGCATATGGTGGAAGATCGGGTGGAGGATATGGAGACGGAAGCTCTGCTCTCGGAGGTTCAGGCTATGGAAGTGGTGGAGTAAGGGGTTCGGGATATGGTAACGGTGGAGGAAATGCATACGGAGGAGGGGTTAGCTCCGGCGTAGGAGGAGCAGGATATGGAAGTGGGAGTAGATATGGAGGTGGAGAAGATCATGGTGTTGGTTACGCTGGTGGGCGAAGTGGAGGTTATGAAAATGGAGGCAATGGTGGGTATGGGCAAGGAAGAGATCATGATATCGGCTATGGAAGTAGAAATGGAAATGGAAATGGAAATGGAAATGGGTATGGAGATTCCCATGGATATGGAAATGGTGGAGGAGTCGACGGTGGGTATGGAAGGGGAGACGGAGTAGGAGGCCATGCTGGTGGTTCTGGCATTGGCGCCGGCGGTGGTTACGGAGGCCATGCTGGTGGTTCTGGAATTGGGGCCGGCGGAGCTTACGGCAGTGGAGGAGCTCACGGAGGAGAACATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGACGGTGGATATGCACTCACAAACTCCATTTCAAACAAGAATTGA

mRNA sequence

ATGGCTATCACTAGAGTCTTGTGCCTTAGCTTTCTTCTCCTTGTAGGGCTGGGTTTAGCTTCCGCTGCCCGAACCCTTCTTGATTATGATCCCCGAACACGTCACTATGGTTACGATCGCCCTAACCCTAGAGAAGGGTACGATTCGGGGCATCGTGACGAATCCTATGATAATGCATATGGTGGAAGATCGGGTGGAGGATATGGAGACGGAAGCTCTGCTCTCGGAGGTTCAGGCTATGGAAGTGGTGGAGTAAGGGGTTCGGGATATGGTAACGGTGGAGGAAATGCATACGGAGGAGGGGTTAGCTCCGGCGTAGGAGGAGCAGGATATGGAAGTGGGAGTAGATATGGAGGTGGAGAAGATCATGGTGTTGGTTACGCTGGTGGGCGAAGTGGAGGTTATGAAAATGGAGGCAATGGTGGGTATGGGCAAGGAAGAGATCATGATATCGGCTATGGAAGTAGAAATGGAAATGGAAATGGAAATGGAAATGGGTATGGAGATTCCCATGGATATGGAAATGGTGGAGGAGTCGACGGTGGGTATGGAAGGGGAGACGGAGTAGGAAGCCATGCTGGTGGTTCTGGCATTGGCGCCGGCGGTGGTTACGGAGGCCATGCTGGTGGCTCTGGAATTGGGGCCGGCGGAGCTTACGGCAGTGGAGGAGCTCACGGAGGAGAACATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGACGGGCTGGGTTTAGCTTCCGCTGCCCGAACCCTTCTTGATTATGATCCCCGAACACGTCACTATGGTTACGATCGCCCTAACCCTAGAGAAGGGTACGATTCGGGGCATCGTGACGAATCCTATGATAATGCATATGGTGGAAGATCGGGTGGAGGATATGGAGACGGAAGCTCTGCTCTCGGAGGTTCAGGCTATGGAAGTGGTGGAGTAAGGGGTTCGGGATATGGTAACGGTGGAGGAAATGCATACGGAGGAGGGGTTAGCTCCGGCGTAGGAGGAGCAGGATATGGAAGTGGGAGTAGATATGGAGGTGGAGAAGATCATGGTGTTGGTTACGCTGGTGGGCGAAGTGGAGGTTATGAAAATGGAGGCAATGGTGGGTATGGGCAAGGAAGAGATCATGATATCGGCTATGGAAGTAGAAATGGAAATGGAAATGGAAATGGAAATGGGTATGGAGATTCCCATGGATATGGAAATGGTGGAGGAGTCGACGGTGGGTATGGAAGGGGAGACGGAGTAGGAGGCCATGCTGGTGGTTCTGGCATTGGCGCCGGCGGTGGTTACGGAGGCCATGCTGGTGGTTCTGGAATTGGGGCCGGCGGAGCTTACGGCAGTGGAGGAGCTCACGGAGGAGAACATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGACGGTGGATATGCACTCACAAACTCCATTTCAAACAAGAATTGA

Coding sequence (CDS)

ATGGCTATCACTAGAGTCTTGTGCCTTAGCTTTCTTCTCCTTGTAGGGCTGGGTTTAGCTTCCGCTGCCCGAACCCTTCTTGATTATGATCCCCGAACACGTCACTATGGTTACGATCGCCCTAACCCTAGAGAAGGGTACGATTCGGGGCATCGTGACGAATCCTATGATAATGCATATGGTGGAAGATCGGGTGGAGGATATGGAGACGGAAGCTCTGCTCTCGGAGGTTCAGGCTATGGAAGTGGTGGAGTAAGGGGTTCGGGATATGGTAACGGTGGAGGAAATGCATACGGAGGAGGGGTTAGCTCCGGCGTAGGAGGAGCAGGATATGGAAGTGGGAGTAGATATGGAGGTGGAGAAGATCATGGTGTTGGTTACGCTGGTGGGCGAAGTGGAGGTTATGAAAATGGAGGCAATGGTGGGTATGGGCAAGGAAGAGATCATGATATCGGCTATGGAAGTAGAAATGGAAATGGAAATGGAAATGGAAATGGGTATGGAGATTCCCATGGATATGGAAATGGTGGAGGAGTCGACGGTGGGTATGGAAGGGGAGACGGAGTAGGAAGCCATGCTGGTGGTTCTGGCATTGGCGCCGGCGGTGGTTACGGAGGCCATGCTGGTGGCTCTGGAATTGGGGCCGGCGGAGCTTACGGCAGTGGAGGAGCTCACGGAGGAGAACATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGACGGGCTGGGTTTAGCTTCCGCTGCCCGAACCCTTCTTGATTATGATCCCCGAACACGTCACTATGGTTACGATCGCCCTAACCCTAGAGAAGGGTACGATTCGGGGCATCGTGACGAATCCTATGATAATGCATATGGTGGAAGATCGGGTGGAGGATATGGAGACGGAAGCTCTGCTCTCGGAGGTTCAGGCTATGGAAGTGGTGGAGTAAGGGGTTCGGGATATGGTAACGGTGGAGGAAATGCATACGGAGGAGGGGTTAGCTCCGGCGTAGGAGGAGCAGGATATGGAAGTGGGAGTAGATATGGAGGTGGAGAAGATCATGGTGTTGGTTACGCTGGTGGGCGAAGTGGAGGTTATGAAAATGGAGGCAATGGTGGGTATGGGCAAGGAAGAGATCATGATATCGGCTATGGAAGTAGAAATGGAAATGGAAATGGAAATGGAAATGGGTATGGAGATTCCCATGGATATGGAAATGGTGGAGGAGTCGACGGTGGGTATGGAAGGGGAGACGGAGTAGGAGGCCATGCTGGTGGTTCTGGCATTGGCGCCGGCGGTGGTTACGGAGGCCATGCTGGTGGTTCTGGAATTGGGGCCGGCGGAGCTTACGGCAGTGGAGGAGCTCACGGAGGAGAACATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGACGGTGGATATGCACTCACAAACTCCATTTCAAACAAGAATTGA

Protein sequence

MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAYGGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGGYDGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAYGGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGGEDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGGYDGGYALTNSISNKN

Homology

[Close]

BLAST of CmoCh16G012140 vs. ExPASy Swiss-Prot
Match: P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.7e-16
Identity = 217/496 (43.75%), Postives = 241/496 (48.59%), Query Frame = 0


Query: 3   ITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAYGG 62
           I R+  L FL+L+ LG+ SA R LL  D      GY       G+ +G        +YGG
Sbjct: 4   IHRLPSLVFLVLLALGVCSARRALLTLDA-----GYGL-----GHGTGGGYGGAAGSYGG 63

Query: 63  RSGGGYGDGSSALG-----GSGYGSGGVRGSGYGNGG--GNAYGGGVSSGVGGAGYGSGS 122
             GGG G G    G     G G GSGG +G G G GG  G  YGGG     GG+G G G 
Sbjct: 64  GGGGGSGGGGGYAGEHGVVGYGGGSGGGQGGGVGYGGDQGAGYGGG-----GGSGGGGGV 123

Query: 123 RYGGGEDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGY----GDSH 182
            YGGG + G GY GG+ G    G  GGYG G +H IGYG   G+G G G GY        
Sbjct: 124 AYGGGGERG-GYGGGQGG----GAGGGYGAGGEHGIGYGGGGGSGAGGGGGYNAGGAQGG 183

Query: 183 GYGNGGGV-DGGYGRGDGVGSHAGGSGI--GAGGGYGG---HAGGSGIGAGGAYGSGGAH 242
           GYG GGG   GG G GD  G + GG G   GAGGGYGG   H GG G G GG  G G   
Sbjct: 184 GYGTGGGAGGGGGGGGDHGGGYGGGQGAGGGAGGGYGGGGEHGGGGGGGQGGGAGGGYGA 243

Query: 243 GGEHDNSKGSGEEGGYDGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDN 302
           GGEH    G G+ GG  G                    GY       G   G        
Sbjct: 244 GGEHGGGAGGGQGGGAGG--------------------GYGAGGEHGGGAGG-------- 303

Query: 303 AYGGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGG--GNAYGGGVSSGVGGAGYGSGSR 362
             GG +GGGYG G    GG+G G GG  G GYG GG  G   GGG   G GG GYG+G  
Sbjct: 304 GQGGGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGG-GYGAGGE 363

Query: 363 YGGGEDHGVGYAGGRSGGY----ENGGNGGYGQGRDHDIGYGS--RNGNGNGNGNGYGDS 422
           +GGG   G G  GG  GGY    E+GG  G GQG     GYG+   +G G G G G G  
Sbjct: 364 HGGG--GGGGQGGGAGGGYAAVGEHGGGYGGGQGGGDGGGYGTGGEHGGGYGGGQGGGAG 423

Query: 423 HGYGNGGGVDGGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHD 474
            GYG GG   GGYG G G GG  G  G     GYGG  GG G G+GG YG GGAHGG + 
Sbjct: 424 GGYGTGGEHGGGYGGGQGGGGGYGAGGDHGAAGYGGGEGGGG-GSGGGYGDGGAHGGGYG 445

[Close]

BLAST of CmoCh16G012140 vs. ExPASy TrEMBL
Match: A0A6J1E5N6 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662 GN=LOC111430999 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 9.9e-110
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60
           MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY
Sbjct: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120
           GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG
Sbjct: 61  GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180
           EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD
Sbjct: 121 EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180

Query: 181 GGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240
           GGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG
Sbjct: 181 GGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240

Query: 241 YDG 244
           YDG
Sbjct: 241 YDG 243

[Close]

BLAST of CmoCh16G012140 vs. ExPASy TrEMBL
Match: A0A6J1E6B7 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662 GN=LOC111430998 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 2.5e-108
Identity = 241/243 (99.18%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60
           MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY
Sbjct: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120
           GGRSGGGYGD SSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG
Sbjct: 61  GGRSGGGYGDRSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180
           EDHGVGY GGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD
Sbjct: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180

Query: 181 GGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240
           GGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG
Sbjct: 181 GGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240

Query: 241 YDG 244
           YDG
Sbjct: 241 YDG 243

[Close]

BLAST of CmoCh16G012140 vs. ExPASy TrEMBL
Match: A0A6J1E700 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662 GN=LOC111431185 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 3.0e-106
Identity = 242/258 (93.80%), Postives = 242/258 (93.80%), Query Frame = 0


Query: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60
           MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY
Sbjct: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120
           GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG
Sbjct: 61  GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180
           EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD
Sbjct: 121 EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180

Query: 181 GGYGRGDGVGS---------------HAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAH 240
           GGYGRGDGVGS               HAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGG H
Sbjct: 181 GGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGGH 240

Query: 241 GGEHDNSKGSGEEGGYDG 244
           GGEHDNSKGSGEEGGYDG
Sbjct: 241 GGEHDNSKGSGEEGGYDG 258

[Close]

BLAST of CmoCh16G012140 vs. ExPASy TrEMBL
Match: A0A6J1E6F7 (glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431141 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 5.6e-105
Identity = 242/266 (90.98%), Postives = 242/266 (90.98%), Query Frame = 0


Query: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60
           MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY
Sbjct: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120
           GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG
Sbjct: 61  GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGS-----------------------RN 180
           EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGS                        N
Sbjct: 121 EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSYENGGNGGYGQGRDHDIGYGSRNGN 180

Query: 181 GNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGG 240
           GNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGG
Sbjct: 181 GNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGG 240

Query: 241 AYGSGGAHGGEHDNSKGSGEEGGYDG 244
           AYGSGGAHGGEHDNSKGSGEEGGYDG
Sbjct: 241 AYGSGGAHGGEHDNSKGSGEEGGYDG 266

[Close]

BLAST of CmoCh16G012140 vs. ExPASy TrEMBL
Match: A0A6J1L118 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 GN=LOC111500189 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.3e-104
Identity = 235/243 (96.71%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60
           MAITRVLCL+FLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY
Sbjct: 1   MAITRVLCLTFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120
           GGRSGG YG   SALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG
Sbjct: 61  GGRSGGEYGVRGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180
           EDHGVGY GGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD
Sbjct: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180

Query: 181 GGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGG 240
           GGYGRGDGVG HAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGG HGGEHDNSKGSGEEGG
Sbjct: 181 GGYGRGDGVGGHAGGSGIGAGGGYGGHAGGSGIGAGGAYGSGGGHGGEHDNSKGSGEEGG 240

Query: 241 YDG 244
           YDG
Sbjct: 241 YDG 243

[Close]

BLAST of CmoCh16G012140 vs. TAIR 10
Match: AT3G23450.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; Has 694543 Blast hits to 47111 proteins in 2535 species: Archae - 1794; Bacteria - 163056; Metazoa - 258989; Fungi - 49151; Plants - 70496; Viruses - 8919; Other Eukaryotes - 142138 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 8.6e-05
Identity = 185/449 (41.20%), Postives = 208/449 (46.33%), Query Frame = 0


Query: 49  SGHRDESYDNAYGGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNG-----GGNAYGGGVS 108
           S  RDE      GG  GGG+G G    GG+G G GG  G G+G G     GG   GGG  
Sbjct: 29  SSGRDEDEKTLVGGGKGGGFGGGFG--GGAGGGVGGGAGGGFGGGAGGGFGGGGGGGGGG 88

Query: 109 SGVGGAGYGSGSRYGGGEDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGN 168
            G GG G+G G  +GGG  HG G  GG  GG+  G  GG+G+G     G G   G G G 
Sbjct: 89  GGGGGGGFGGGGGFGGG--HGGGVGGGVGGGHGGGVGGGFGKGGGIGGGIGKGGGVGGGI 148

Query: 169 GNGYGDSHGYGNGGGVDGGYGRGDGVGSHAG-----GSGIGAGGGYGGHAG--------- 228
           G G G   G G GGGV GG G+G G+G   G     G GIG GGG GG  G         
Sbjct: 149 GKGGGIGGGIGKGGGVGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGI 208

Query: 229 GSGIGAGGAYGSGGAHGGEHDNSKGSGEEGGYDGLGLASAARTLLDYDPRTRHYGYDRPN 288
           G G G GG +G GG  GG     KG G  GG+   G                        
Sbjct: 209 GKGGGVGGGFGKGGGVGG--GIGKGGGVGGGFGKGG------------------------ 268

Query: 289 PREGYDSGHRDESYDNAYGGRSGGGYGDGSSALGGSGYGS--GGVRGSGYGNGGGNAYGG 348
              G   G          GG  GGG G G    GG G G   GG  G G G GGG   GG
Sbjct: 269 ---GVGGG-------IGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGIGKGG 328

Query: 349 GVSSGVG-GAGYGSGSRYGGGEDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNGN 408
           G+  G+G G G G G   GGG   G+G  GG  GG   G  GG G G    IG G   G 
Sbjct: 329 GIGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGGGFGKGGGIGGG----IGKGGGIGG 388

Query: 409 GNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGGH-AGGSGIGAGGGYGGHAG-GSGIGAGG 468
           G G G G G   G G GGG+ GG+G+G G+GG   GG G G GGG+G   G G GIG GG
Sbjct: 389 GGGFGKGGGIGGGIGKGGGIGGGFGKGGGIGGGIGGGGGFGGGGGFGKGGGIGGGIGKGG 433

Query: 469 AYGSGG--AHGGEHDNSKGSGEEGGYDGG 472
            +G GG    GG      G G+ GG+ GG
Sbjct: 449 GFGGGGGFGKGGGIGGGGGFGKGGGFGGG 433

[Close]

BLAST of CmoCh16G012140 vs. TAIR 10
Match: AT5G46730.1 (glycine-rich protein )

HSP 1 Score: 42.7 bits (99), Expect = 9.5e-04
Identity = 134/330 (40.61%), Postives = 148/330 (44.85%), Query Frame = 0


Query: 89  GYGNGGGNAYGGGVSSGVGGAGYG--SGSRYGGGEDHGVGYAGGRSGGYENGGNGGYGQG 148
           G  +GGG   GGG S GV   GYG  SG  YGGG   G G   G + GY +GG  G+G  
Sbjct: 31  GQASGGGGHGGGGGSGGVSSGGYGGESGGGYGGGSGEGAGGGYGGAEGYASGGGSGHG-- 90

Query: 149 RDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGSHAGGSGIGAGGGYGG 208
                          G G G   S GY +G G  GG G G   G HAGG G         
Sbjct: 91  ---------------GGGGGAASSGGYASGAGEGGGGGYGGAAGGHAGGGG--------- 150

Query: 209 HAGGSGIGAGGAYGSGGAHGGEHDNSKGSGEEGGYDGLGLASAARTLLDYDPRTRHYGYD 268
             GGSG G G AYG+GG H   + N  G+GE GG      A A+                
Sbjct: 151 --GGSGGGGGSAYGAGGEHASGYGN--GAGEGGG------AGAS---------------- 210

Query: 269 RPNPREGYDSGHRDESYDNAYGGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYG 328
                 GY  G        AYGG  G G G G  + GG+  GSG   G G G GGG ++G
Sbjct: 211 ------GYGGG--------AYGGGGGHGGGGGGGSAGGAHGGSGYGGGEGGGAGGGGSHG 270

Query: 329 G-GVSSGVGGAGYGSGSRYGGGEDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSRNG 388
           G G   G GG G G G  YGGG  HG GY    SGG E GG GG   G     GYG   G
Sbjct: 271 GAGGYGGGGGGGSGGGGAYGGGGAHGGGYG---SGGGEGGGYGGGAAG-----GYGGGGG 286

Query: 389 NGNGNGNGYGDSHGYGNGGGVDGGYGRGDG 416
            G G G  YG  HG G+GGG  GG G G G
Sbjct: 331 GGEGGGGSYGGEHGGGSGGGHGGGGGHGGG 286

The following BLAST results are available for this feature:

BLAST of CmoCh16G012140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10496	4.7e-16	43.75	Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2...	[more]

BLAST of CmoCh16G012140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5N6	9.9e-110	100.00	glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1E6B7	2.5e-108	99.18	glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1E700	3.0e-106	93.80	glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1E6F7	5.6e-105	90.98	glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1L118	1.3e-104	96.71	glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of CmoCh16G012140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23450.1	8.6e-05	41.20	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G46730.1	9.5e-04	40.61	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 126..141 score: 46.09 coord: 156..166 score: 38.64 coord: 201..219 score: 43.42 coord: 4..20 score: 35.29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 442..482
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G012140.1	CmoCh16G012140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding