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CmoCh16G012000 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAGCTCAGCAACATGGGAAGTGTTGCCAAAAAGAAGCTCAAAATTTGTAGAGCCAAACTCGACGAGAAGGTGCAAAAAGCGTCGGCGAAGACAGCGGAGGAGAGAAAGATTGCGGAGGAGCGGAGGAAGGCGGCGGAGGCAGAGGCGAAGCGGGAGCTACACGAGGCGAAAGCCCGACATGCTGCTCAAAAGCTAAGAACTAGGCAGTCACATGTAGTTGGCCACCGTTTACACCATCAGCCACCGGTGGAGGGGGGCAGCGCCGCCAATGTTCCCGCTTATCCTATAGCTAGTCCGGAGGGCTACTACCCTGGACATAGAATTTAA ATGGAGAAGCTCAGCAACATGGGAAGTGTTGCCAAAAAGAAGCTCAAAATTTGTAGAGCCAAACTCGACGAGAAGGTGCAAAAAGCGTCGGCGAAGACAGCGGAGGAGAGAAAGATTGCGGAGGAGCGGAGGAAGGCGGCGGAGGCAGAGGCGAAGCGGGAGCTACACGAGGCGAAAGCCCGACATGCTGCTCAAAAGCTAAGAACTAGGCAGTCACATGTAGTTGGCCACCGTTTACACCATCAGCCACCGGTGGAGGGGGGCAGCGCCGCCAATGTTCCCGCTTATCCTATAGCTAGTCCGGAGGGCTACTACCCTGGACATAGAATTTAA ATGGAGAAGCTCAGCAACATGGGAAGTGTTGCCAAAAAGAAGCTCAAAATTTGTAGAGCCAAACTCGACGAGAAGGTGCAAAAAGCGTCGGCGAAGACAGCGGAGGAGAGAAAGATTGCGGAGGAGCGGAGGAAGGCGGCGGAGGCAGAGGCGAAGCGGGAGCTACACGAGGCGAAAGCCCGACATGCTGCTCAAAAGCTAAGAACTAGGCAGTCACATGTAGTTGGCCACCGTTTACACCATCAGCCACCGGTGGAGGGGGGCAGCGCCGCCAATGTTCCCGCTTATCCTATAGCTAGTCCGGAGGGCTACTACCCTGGACATAGAATTTAA MEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVVGHRLHHQPPVEGGSAANVPAYPIASPEGYYPGHRI Homology
BLAST of CmoCh16G012000 vs. ExPASy Swiss-Prot
Match: Q39138 (Late embryogenesis abundant protein 6 OS=Arabidopsis thaliana OX=3702 GN=LEA6 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 6.1e-12 Identity = 48/105 (45.71%), Postives = 66/105 (62.86%), Query Frame = 0
BLAST of CmoCh16G012000 vs. ExPASy Swiss-Prot
Match: Q96273 (Late embryogenesis abundant protein 18 OS=Arabidopsis thaliana OX=3702 GN=LEA18 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.9e-06 Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 0
BLAST of CmoCh16G012000 vs. ExPASy TrEMBL
Match: A0A6J1E5Y8 (late embryogenesis abundant protein 6-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431099 PE=3 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CmoCh16G012000 vs. ExPASy TrEMBL
Match: A0A6J1E6N7 (late embryogenesis abundant protein 6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431099 PE=3 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CmoCh16G012000 vs. ExPASy TrEMBL
Match: A0A6J1HN56 (late embryogenesis abundant protein 6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465145 PE=3 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 6.7e-46 Identity = 105/110 (95.45%), Postives = 107/110 (97.27%), Query Frame = 0
BLAST of CmoCh16G012000 vs. ExPASy TrEMBL
Match: A0A6J1HL48 (late embryogenesis abundant protein 6-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465145 PE=3 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 6.7e-46 Identity = 105/110 (95.45%), Postives = 107/110 (97.27%), Query Frame = 0
BLAST of CmoCh16G012000 vs. ExPASy TrEMBL
Match: A0A5D3CHS9 (Seed maturation protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001710 PE=3 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 4.4e-37 Identity = 95/117 (81.20%), Postives = 101/117 (86.32%), Query Frame = 0
BLAST of CmoCh16G012000 vs. TAIR 10
Match: AT1G32560.1 (Late embryogenesis abundant protein, group 1 protein ) HSP 1 Score: 71.6 bits (174), Expect = 4.4e-13 Identity = 48/105 (45.71%), Postives = 66/105 (62.86%), Query Frame = 0
BLAST of CmoCh16G012000 vs. TAIR 10
Match: AT2G35300.1 (Late embryogenesis abundant protein, group 1 protein ) HSP 1 Score: 52.8 bits (125), Expect = 2.1e-07 Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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