CmoCh16G011030 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G011030
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	exopolygalacturonase-like
Location	Cmo_Chr16: 7786669 .. 7788256 (+)
RNA-Seq Expression	CmoCh16G011030
Synteny	CmoCh16G011030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATGAACATGAAGTCGATAACTCTATCGTTCGTGTTATTATTATACGTTTCTATAGGAACAGCTCAATCAAGTGATGGAGTTTTTGACGTAACAACATACGGTGCTAAGCCTAATGCTGATATAACTCAGGTAAAAACTAATATCAAATATATCGATGTTTAGATATTTTTACGATGATAAATCTTTTCTAATTATGTTCGAGATTTTTGAAAAGATTCTAGAAAAGGCATGGAAGGACGCTTGTGCTTCACCGATTCAAAGTAAATTAATTATTCCAAAAGAGACTTACACGTTAGGTGTAATCACAATGCTTGGTCCTTGCAAGAGTCCAATTGATATTGTCGTGCAAGGAACAATAATGGCACCCGTAGATATAACAGGTGATGGTTGGATTCAGTTCAGATATGTCGACAAAATTTCATTAACAGGTGGCGGAGTTTTTGATGGACAAGGACAAAAAGCTTGGGCAAGTAACGATTGTCATAAAAACCCCAAGTGTGCAAGAATTCCAATGGTAAATACACTTAAATTAACTATTTCCAAATTTTAATTTATTGTTTATACTCATGCATGATCGTTTTTTTTTACAGAGTTTGAAGTTCAGCTTTGTAAAAGATTCAATTGTGAGGGACATAACGTCAAAAGACAGCAAGAATTTTCATGTCAATATCCTAGGTTGTAAGAATCTTACTTTCGATCACGTGACCATAAATGCACCGGGGAATAGTATTAATAGTGATGGAATTCACATGGGTCGTTGTGATGGAGTTAATATCATCAATTCAGTTATTGGTACTGGTGATGATTGTATCTCACTCGGAGATGGAAGCAGACAGGTAACAGTTACGAACGTGACGTGTGGACCTGGACACGGCATAAGCGTAGGAAGTCTAGGACAATATCTTGTTGAAGAACCGGTTGCTGGGCTTTATGTCAAAAATTGTAAATTAATTGGTACAACAAATGGCCTAAGGATCAAAACATGGCCGGCTTCTCCGGCTACTGGATCGGTTACTGATATGCACTATGAAGATATAACTTTGGTTGACGTCCAAAATCCAATTATTGTGGATCAAGAATACTGTCCATACAACAAATGTAACCGGAAGGTACTGGAATTACGAAATCTTTTATTTTCTTTATTTTATTTTAATTAGAAATAATTTCATTCAAATTGTGTTTATTTGATGTTTTTCAGATTCCGTCGAAAATCAAGATAAGTAAGGTGAGTTTCAAGAATATTAGAGGTAGTTCTGGTACTGCAGTTGCTGTGAAGCTTTTGTGTAGTGCTGATTATCCATGTGAAGATGTGCAGTTATCTGACATTGATATCACCTATACTGGACGTGAAGGTCCAGTTGTATCTGAATGTTCGAATGTGAAACCGGTTGTTACTGGGATACAAAAACCTCTTATTTGTCCTTCGTGAGCATAAGCTATTTCTATAAAAGATGGTCGTTTGAGGAAGATATTTAATTATGTAGTTTTGTTTTACGCTCTAGAGAATAAATTTGGAGTGAACAAAGGGTTCTCTTTCTTTGTATTTATAAATGAAGAGGAATAAAGTTTTGATTTTGGGTTG

mRNA sequence

ATGGGAACAGCTCAATCAAGTGATGGAGTTTTTGACGTAACAACATACGGTGCTAAGCCTAATGCTGATATAACTCAGATTCTAGAAAAGGCATGGAAGGACGCTTGTGCTTCACCGATTCAAAGTAAATTAATTATTCCAAAAGAGACTTACACGTTAGGTGTAATCACAATGCTTGGTCCTTGCAAGAGTCCAATTGATATTGTCGTGCAAGGAACAATAATGGCACCCGTAGATATAACAGGTGATGGTTGGATTCAGTTCAGATATGTCGACAAAATTTCATTAACAGGTGGCGGAGTTTTTGATGGACAAGGACAAAAAGCTTGGGCAAGTAACGATTGTCATAAAAACCCCAAGTGTGCAAGAATTCCAATGAGTTTGAAGTTCAGCTTTGTAAAAGATTCAATTGTGAGGGACATAACGTCAAAAGACAGCAAGAATTTTCATGTCAATATCCTAGGTTGTAAGAATCTTACTTTCGATCACGTGACCATAAATGCACCGGGGAATAGTATTAATAGTGATGGAATTCACATGGGTCGTTGTGATGGAGTTAATATCATCAATTCAGTTATTGGTACTGGTGATGATTGTATCTCACTCGGAGATGGAAGCAGACAGGTAACAGTTACGAACGTGACGTGTGGACCTGGACACGGCATAAGCGTAGGAAGTCTAGGACAATATCTTGTTGAAGAACCGGTTGCTGGGCTTTATGTCAAAAATTGTAAATTAATTGGTACAACAAATGGCCTAAGGATCAAAACATGGCCGGCTTCTCCGGCTACTGGATCGGTTACTGATATGCACTATGAAGATATAACTTTGGTTGACGTCCAAAATCCAATTATTGTGGATCAAGAATACTGTCCATACAACAAATGTAACCGGAAGATTCCGTCGAAAATCAAGATAAGTAAGGTGAGTTTCAAGAATATTAGAGGTAGTTCTGGTACTGCAGTTGCTGTGAAGCTTTTGTGTAGTGCTGATTATCCATGTGAAGATGTGCAGTTATCTGACATTGATATCACCTATACTGGACGTGAAGGTCCAGTTGTATCTGAATGTTCGAATGTGAAACCGGTTGTTACTGGGATACAAAAACCTCTTATTTGTCCTTCGTGAGCATAAGCTATTTCTATAAAAGATGGTCGTTTGAGGAAGATATTTAATTATGTAGTTTTGTTTTACGCTCTAGAGAATAAATTTGGAGTGAACAAAGGGTTCTCTTTCTTTGTATTTATAAATGAAGAGGAATAAAGTTTTGATTTTGGGTTG

Coding sequence (CDS)

ATGGGAACAGCTCAATCAAGTGATGGAGTTTTTGACGTAACAACATACGGTGCTAAGCCTAATGCTGATATAACTCAGATTCTAGAAAAGGCATGGAAGGACGCTTGTGCTTCACCGATTCAAAGTAAATTAATTATTCCAAAAGAGACTTACACGTTAGGTGTAATCACAATGCTTGGTCCTTGCAAGAGTCCAATTGATATTGTCGTGCAAGGAACAATAATGGCACCCGTAGATATAACAGGTGATGGTTGGATTCAGTTCAGATATGTCGACAAAATTTCATTAACAGGTGGCGGAGTTTTTGATGGACAAGGACAAAAAGCTTGGGCAAGTAACGATTGTCATAAAAACCCCAAGTGTGCAAGAATTCCAATGAGTTTGAAGTTCAGCTTTGTAAAAGATTCAATTGTGAGGGACATAACGTCAAAAGACAGCAAGAATTTTCATGTCAATATCCTAGGTTGTAAGAATCTTACTTTCGATCACGTGACCATAAATGCACCGGGGAATAGTATTAATAGTGATGGAATTCACATGGGTCGTTGTGATGGAGTTAATATCATCAATTCAGTTATTGGTACTGGTGATGATTGTATCTCACTCGGAGATGGAAGCAGACAGGTAACAGTTACGAACGTGACGTGTGGACCTGGACACGGCATAAGCGTAGGAAGTCTAGGACAATATCTTGTTGAAGAACCGGTTGCTGGGCTTTATGTCAAAAATTGTAAATTAATTGGTACAACAAATGGCCTAAGGATCAAAACATGGCCGGCTTCTCCGGCTACTGGATCGGTTACTGATATGCACTATGAAGATATAACTTTGGTTGACGTCCAAAATCCAATTATTGTGGATCAAGAATACTGTCCATACAACAAATGTAACCGGAAGATTCCGTCGAAAATCAAGATAAGTAAGGTGAGTTTCAAGAATATTAGAGGTAGTTCTGGTACTGCAGTTGCTGTGAAGCTTTTGTGTAGTGCTGATTATCCATGTGAAGATGTGCAGTTATCTGACATTGATATCACCTATACTGGACGTGAAGGTCCAGTTGTATCTGAATGTTCGAATGTGAAACCGGTTGTTACTGGGATACAAAAACCTCTTATTTGTCCTTCGTGA

Protein sequence

MGTAQSSDGVFDVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGPCKSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPKCARIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHMGRCDGVNIINSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLYVKNCKLIGTTNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKIPSKIKISKVSFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNVKPVVTGIQKPLICPS

Homology

[Close]

BLAST of CmoCh16G011030 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 1.0e-122
Identity = 202/355 (56.90%), Postives = 265/355 (74.65%), Query Frame = 0


Query: 23  DITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGPCKSPIDIVVQGTIMAPVD--- 82
           D TQ L  AWK+ACAS   S +++PK  + +G+IT+ GPCKS I + +QGT+ AP D   
Sbjct: 1   DSTQALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSK 60

Query: 83  ITGDGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKN-PKCARIPMSLKFSFVKDSIV 142
           I G GWI    +D +++ GGGVFDGQG+ AW  NDCHKN P C  + M+L+   V +SI+
Sbjct: 61  IKGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSIL 120

Query: 143 RDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHMGRCDGVNIINSVIGTGDD 202
           RD+T+ DSKNFHVN++GCKNLTF+   I+A   SIN+DGIH+GR DGVNIIN+ I TGDD
Sbjct: 121 RDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDD 180

Query: 203 CISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLYVKNCKLIGTTNGLRIKTW 262
           CISLGDGS+ + +TN+TCGPGHGISVGSLG+Y  EE V G+YVKNC + G+ NG+RIKTW
Sbjct: 181 CISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTW 240

Query: 263 PASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKIPSKIKISKVSFKNIRGSS 322
           P S   G  ++MH++DIT+  V  PI++DQ YCPYN+C  ++PS +K+SK+SFKNI+G+S
Sbjct: 241 PKS-EPGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTS 300

Query: 323 GTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNVKPVVTGIQKPLIC 374
            T  AVKL+CS  +PC  V+L+DID+TY+G+ GP  S C N+KP + G Q P IC
Sbjct: 301 TTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAIC 354

[Close]

BLAST of CmoCh16G011030 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 5.3e-116
Identity = 197/369 (53.39%), Postives = 274/369 (74.25%), Query Frame = 0


Query: 6   SSDGVFDVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGPCKSP 65
           +  GV D++ +G KPN+DI Q L  AW +ACAS   +K++IP  TY L  I + GPCK+P
Sbjct: 20  AQSGVLDISKFGGKPNSDIGQALTSAWNEACASTTAAKIVIPAGTYQLNGIELKGPCKAP 79

Query: 66  IDIVVQGTIMAPVD---ITG-DGWIQFRYVDKISLTGGGVFDGQG----QKAWASNDCHK 125
           I++ V GTI AP D   I G + W +F Y+D ++L+G GVFDGQG    +KA  ++    
Sbjct: 80  IELQVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGATVYKKAAPASAWSG 139

Query: 126 NPKCARIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDG 185
               +++ M+  F+FV +SIVR +TSKDSKNFHV + GCKN+TFD  TI APG+S N+DG
Sbjct: 140 KNSNSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDG 199

Query: 186 IHMGRCDGVNIINSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVA 245
           IHMG+   V I+N+ IGTGDDC+S+GDGS+Q+TV  V CGPGHG+SVGSLG++  EE V 
Sbjct: 200 IHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVE 259

Query: 246 GLYVKNCKLIGTTNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCN 305
           G+ VKNC L  T NG+RIKTWP +P T +V+D+H+EDIT+ +V+NP+I+DQEY P+N+C+
Sbjct: 260 GITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCS 319

Query: 306 RKIPSKIKISKVSFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSEC 365
           +K PSKIK+SK+SFKN++G+SGTA  V L+CS+  PC+ V+L+++D+ + G   P  ++C
Sbjct: 320 KKNPSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNG--APTTAKC 379

Query: 366 SNVKPVVTG 367
           +NVKP+VTG
Sbjct: 380 TNVKPLVTG 386

[Close]

BLAST of CmoCh16G011030 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.6e-115
Identity = 195/372 (52.42%), Postives = 262/372 (70.43%), Query Frame = 0


Query: 5   QSSDGVFDVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGPCK- 64
           QSS  VF+V  YGAK   DI+Q + KAWK ACAS   S ++IPK  Y +G + M GPCK 
Sbjct: 4   QSSGSVFNVNDYGAKGAGDISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKG 63

Query: 65  SPIDIVVQGTIMAPVD---ITGDGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPK 124
           S I   + G + AP D      DGW+ F  +D ++++G G  DGQGQ AWA N+C KNP 
Sbjct: 64  SKIGFQIDGVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPN 123

Query: 125 CARIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHM 184
           C    M+L+F F+K ++VRDITS +SK FH+N+L C+++TF HVT+ APG SIN+DGIH+
Sbjct: 124 CKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHV 183

Query: 185 GRCDGVNIINSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLY 244
           G   GV I N+ I TGDDCIS+G GS+ VT+T V CGPGHGIS+GSLG+Y  E+ V G+ 
Sbjct: 184 GISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGIT 243

Query: 245 VKNCKLIGTTNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKI 304
           VK C   GT NG+R+KTWP SP  G+ TD+ ++D+T+ +VQNP+I+DQEYCPY +C+R+ 
Sbjct: 244 VKGCTFSGTMNGVRVKTWPNSP-PGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQA 303

Query: 305 PSKIKISKVSFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNV 364
           PS+IK+S ++F NIRG+S   VAV + CS   PC ++++ +I+++Y G  GP  S CSNV
Sbjct: 304 PSRIKLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNV 363

Query: 365 KPVVTGIQKPLI 373
           KP  +G Q P I
Sbjct: 364 KPTFSGKQVPAI 374

[Close]

BLAST of CmoCh16G011030 vs. ExPASy Swiss-Prot
Match: P35337 (Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 4.7e-112
Identity = 184/364 (50.55%), Postives = 255/364 (70.05%), Query Frame = 0


Query: 12  DVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGPCKSPIDIVVQ 71
           +V T G  PN+DIT  + KA+  AC +P  S+++IPK  + LG   M GPCKSPI+  +Q
Sbjct: 23  EVFTAGGPPNSDITAAVLKAFTSACQAPAPSQVLIPKGDFKLGETVMTGPCKSPIEFTLQ 82

Query: 72  GTIMAPVDIT--GDGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPKCARIPMSLK 131
           G +      T   D W+ F  ++   L GGG FDG+G  AW +N+CHK  +C ++P+S++
Sbjct: 83  GNVKTDGGSTQGKDRWVVFEKINGFKLNGGGTFDGEGNAAWKANNCHKTFECKKLPISVR 142

Query: 132 FSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHMGRCDGVNII 191
           F FV ++ ++D+TS D+KNFH N++  KN+TFD++ I AP  S N+DGIH+GRC+GV I+
Sbjct: 143 FDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKIL 202

Query: 192 NSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLYVKNCKLIGT 251
           N+ I TGDDCIS+GDG + + +  V CGPGHGISVGSLG+Y  E+ V  + VKNC L GT
Sbjct: 203 NTKIATGDDCISVGDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVTDITVKNCTLEGT 262

Query: 252 TNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKIPSKIKISKV 311
           +NGLRIKTWP++  T +   +H+EDI L  V NPI++DQEYCP+N+CN+  PS IK+  +
Sbjct: 263 SNGLRIKTWPSAACTTTAAGIHFEDIILNKVSNPILIDQEYCPWNQCNKNKPSTIKLVDI 322

Query: 312 SFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNVKPVVTGIQK 371
           +F+NIRG+S    AVKLLCS  +PCE+V++ DI+I YTG +GP   EC+NV P + G Q 
Sbjct: 323 TFRNIRGTSENKDAVKLLCSKGHPCENVEIGDINIEYTGPDGPPTFECTNVTPKLVGAQN 382

Query: 372 PLIC 374
           P  C
Sbjct: 383 PKAC 386

[Close]

BLAST of CmoCh16G011030 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 4.0e-111
Identity = 187/372 (50.27%), Postives = 263/372 (70.70%), Query Frame = 0


Query: 5   QSSDGVFDVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGPCKS 64
           +S  GVFD+T YGA  NADI++ L  A+K+AC S   S ++IPK T+T+  + + GPCKS
Sbjct: 21  ESQTGVFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTFTMNQVKLEGPCKS 80

Query: 65  PIDIVVQGTIMAPVD---ITGDGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPKC 124
           P+++ +Q T+ AP D   +    W+    +D+ +++GGG+ DGQ   AW   +C ++ KC
Sbjct: 81  PLELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAAAAW---ECKQSKKC 140

Query: 125 ARIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHMG 184
            ++P +L F+ + +S ++DIT+ DSK+FHVN+  CKNLTF    ++AP NS N+DGIH+ 
Sbjct: 141 NKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVS 200

Query: 185 RCDGVNIINSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLYV 244
           R   VNI +S   TGDDCIS+GD + Q+ +T VTCGPGHGISVGSLG    E+PV G++V
Sbjct: 201 RSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFV 260

Query: 245 KNCKLIGTTNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKIP 304
           +NC    T NG+RIKTWPAS   G V D+H+EDI + +V NP+++DQ YCP+NKCN+ +P
Sbjct: 261 RNCTFTNTDNGVRIKTWPAS-HPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLP 320

Query: 305 SKIKISKVSFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNVK 364
           S++KISKVSF+NI+G+S T  AV LL S   PCE +++ DIDITY+G+EGP  S C N+K
Sbjct: 321 SQVKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEGPAKSSCENIK 380

Query: 365 PVVTGIQKPLIC 374
           P + G Q P +C
Sbjct: 381 PSLKGKQNPPVC 388

[Close]

BLAST of CmoCh16G011030 vs. ExPASy TrEMBL
Match: A0A6J1F4L3 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111440604 PE=3 SV=1)

HSP 1 Score: 770.0 bits (1987), Expect = 4.5e-219
Identity = 374/375 (99.73%), Postives = 375/375 (100.00%), Query Frame = 0


Query: 1   MGTAQSSDGVFDVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLG 60
           +GTAQSSDGVFDVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLG
Sbjct: 20  IGTAQSSDGVFDVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLG 79

Query: 61  PCKSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPK 120
           PCKSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPK
Sbjct: 80  PCKSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPK 139

Query: 121 CARIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHM 180
           CARIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHM
Sbjct: 140 CARIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHM 199

Query: 181 GRCDGVNIINSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLY 240
           GRCDGVNIINSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLY
Sbjct: 200 GRCDGVNIINSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLY 259

Query: 241 VKNCKLIGTTNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKI 300
           VKNCKLIGTTNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKI
Sbjct: 260 VKNCKLIGTTNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKI 319

Query: 301 PSKIKISKVSFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNV 360
           PSKIKISKVSFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNV
Sbjct: 320 PSKIKISKVSFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNV 379

Query: 361 KPVVTGIQKPLICPS 376
           KPVVTGIQKPLICPS
Sbjct: 380 KPVVTGIQKPLICPS 394

[Close]

BLAST of CmoCh16G011030 vs. ExPASy TrEMBL
Match: A0A6J1L5F4 (exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111500183 PE=3 SV=1)

HSP 1 Score: 745.7 bits (1924), Expect = 9.2e-212
Identity = 359/373 (96.25%), Postives = 366/373 (98.12%), Query Frame = 0


Query: 3   TAQSSDGVFDVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGPC 62
           TAQSSDGVFDVTTYGAKPNADITQIL+KAWKDACASPIQSKLIIPKETYTLGVIT+LGPC
Sbjct: 22  TAQSSDGVFDVTTYGAKPNADITQILDKAWKDACASPIQSKLIIPKETYTLGVITLLGPC 81

Query: 63  KSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPKCA 122
           KSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQKAW  NDCHKNPKCA
Sbjct: 82  KSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQKAWERNDCHKNPKCA 141

Query: 123 RIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHMGR 182
           RIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPG SINSDGIHMGR
Sbjct: 142 RIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGTSINSDGIHMGR 201

Query: 183 CDGVNIINSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLYVK 242
           CDGVNIINSVIGTGDDCISLGDGSR+VT+TNVTCGPGHGISVGSLGQYLVEEPVAGLYVK
Sbjct: 202 CDGVNIINSVIGTGDDCISLGDGSREVTITNVTCGPGHGISVGSLGQYLVEEPVAGLYVK 261

Query: 243 NCKLIGTTNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKIPS 302
           NC LIGTTNGLRIKTWPASPATGSVTDMHYEDI LVDVQNPII+DQEYCPYNKCNRKIPS
Sbjct: 262 NCTLIGTTNGLRIKTWPASPATGSVTDMHYEDIVLVDVQNPIILDQEYCPYNKCNRKIPS 321

Query: 303 KIKISKVSFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNVKP 362
           KIKISKVSFKNIRGS+G AVAVKLLCSADYPCEDV LSDIDITYTGREGPVVSECSNVKP
Sbjct: 322 KIKISKVSFKNIRGSAGNAVAVKLLCSADYPCEDVTLSDIDITYTGREGPVVSECSNVKP 381

Query: 363 VVTGIQKPLICPS 376
           VVTGIQKP+ICPS
Sbjct: 382 VVTGIQKPIICPS 394

[Close]

BLAST of CmoCh16G011030 vs. ExPASy TrEMBL
Match: A0A6J1HJP4 (exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111465122 PE=3 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 4.6e-211
Identity = 358/373 (95.98%), Postives = 365/373 (97.86%), Query Frame = 0


Query: 3   TAQSSDGVFDVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGPC 62
           TAQSSDGVFDVTTYGAKPNADITQIL+KAWKDACASPIQSKLIIPKETY LGVIT+LGPC
Sbjct: 22  TAQSSDGVFDVTTYGAKPNADITQILDKAWKDACASPIQSKLIIPKETYMLGVITLLGPC 81

Query: 63  KSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPKCA 122
           KSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQKAW  NDCHKNPKCA
Sbjct: 82  KSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQKAWERNDCHKNPKCA 141

Query: 123 RIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHMGR 182
           RIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPG SINSDGIHMGR
Sbjct: 142 RIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGTSINSDGIHMGR 201

Query: 183 CDGVNIINSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLYVK 242
           CDGVNIINSVIGTGDDCISLGDGSR+VT+TNVTCGPGHGISVGSLGQYLVEEPVAGLYVK
Sbjct: 202 CDGVNIINSVIGTGDDCISLGDGSREVTITNVTCGPGHGISVGSLGQYLVEEPVAGLYVK 261

Query: 243 NCKLIGTTNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKIPS 302
           NC LIGTTNGLRIKTWPASPATGSVTDMHYEDI LVDVQNPII+DQEYCPYNKCNRKIPS
Sbjct: 262 NCTLIGTTNGLRIKTWPASPATGSVTDMHYEDIVLVDVQNPIILDQEYCPYNKCNRKIPS 321

Query: 303 KIKISKVSFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNVKP 362
           KIKISKVSFKNIRGS+G AVAVKLLCSADYPCEDV LSDIDITYTGREGPVVSECSNVKP
Sbjct: 322 KIKISKVSFKNIRGSAGNAVAVKLLCSADYPCEDVTLSDIDITYTGREGPVVSECSNVKP 381

Query: 363 VVTGIQKPLICPS 376
           VVTGIQKP+ICPS
Sbjct: 382 VVTGIQKPIICPS 394

[Close]

BLAST of CmoCh16G011030 vs. ExPASy TrEMBL
Match: A0A6J1HKP9 (exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111465044 PE=3 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 4.6e-211
Identity = 358/373 (95.98%), Postives = 365/373 (97.86%), Query Frame = 0


Query: 3   TAQSSDGVFDVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGPC 62
           TAQSSDGVFDVTTYGAKPNADITQIL+KAWKDACASPIQSKLIIPKETY LGVIT+LGPC
Sbjct: 22  TAQSSDGVFDVTTYGAKPNADITQILDKAWKDACASPIQSKLIIPKETYMLGVITLLGPC 81

Query: 63  KSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPKCA 122
           KSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQKAW  NDCHKNPKCA
Sbjct: 82  KSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQKAWERNDCHKNPKCA 141

Query: 123 RIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHMGR 182
           RIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPG SINSDGIHMGR
Sbjct: 142 RIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGTSINSDGIHMGR 201

Query: 183 CDGVNIINSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLYVK 242
           CDGVNIINSVIGTGDDCISLGDGSR+VT+TNVTCGPGHGISVGSLGQYLVEEPVAGLYVK
Sbjct: 202 CDGVNIINSVIGTGDDCISLGDGSREVTITNVTCGPGHGISVGSLGQYLVEEPVAGLYVK 261

Query: 243 NCKLIGTTNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKIPS 302
           NC LIGTTNGLRIKTWPASPATGSVTDMHYEDI LVDVQNPII+DQEYCPYNKCNRKIPS
Sbjct: 262 NCTLIGTTNGLRIKTWPASPATGSVTDMHYEDIVLVDVQNPIILDQEYCPYNKCNRKIPS 321

Query: 303 KIKISKVSFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNVKP 362
           KIKISKVSFKNIRGS+G AVAVKLLCSADYPCEDV LSDIDITYTGREGPVVSECSNVKP
Sbjct: 322 KIKISKVSFKNIRGSAGNAVAVKLLCSADYPCEDVTLSDIDITYTGREGPVVSECSNVKP 381

Query: 363 VVTGIQKPLICPS 376
           VVTGIQKP+ICPS
Sbjct: 382 VVTGIQKPIICPS 394

[Close]

BLAST of CmoCh16G011030 vs. ExPASy TrEMBL
Match: A0A6J1DUC6 (exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111024096 PE=3 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 2.1e-160
Identity = 253/372 (68.01%), Postives = 316/372 (84.95%), Query Frame = 0


Query: 4   AQSSDGVFDVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGPCK 63
           AQSSDG+FDVT +GA PNADI++ L  AWK+ACASPIQSK+IIPK  Y LG I + GPCK
Sbjct: 22  AQSSDGIFDVTKFGAMPNADISKALMSAWKEACASPIQSKVIIPKVAYKLGTIDLTGPCK 81

Query: 64  SPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPKCAR 123
           SPI++ +QGTI AP+D+TG+GW+QF+Y+D  +L+GGG FDGQG+ AW  NDC KNPKC R
Sbjct: 82  SPIEVQLQGTIQAPIDLTGEGWVQFKYIDHFTLSGGGTFDGQGKAAWEKNDCDKNPKCDR 141

Query: 124 IPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHMGRC 183
           +PMSL+FSF+ +SIV DITSKDSKNFHV ILGC NLTF HV +NAPG+SIN+DGIH+GR 
Sbjct: 142 LPMSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRS 201

Query: 184 DGVNIINSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLYVKN 243
            G+NI+++ IGTGDDCISLGDGS+QVT+TNVTCGPGHGISVGSLG+Y  EEPV G+   N
Sbjct: 202 TGINILSTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYTAEEPVEGIRATN 261

Query: 244 CKLIGTTNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKIPSK 303
           C ++ T+NG+RIKTWPASP  G+ +DMH+ED+ +V+V NPI++DQEYCPYN+CN+K PSK
Sbjct: 262 CTIMNTSNGVRIKTWPASPTAGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSK 321

Query: 304 IKISKVSFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNVKPV 363
           +KISKVSFKN+RGSS  A+AVKL+CSA+ PCEDV+++DID+TY G EGP+ S+C NVKP+
Sbjct: 322 VKISKVSFKNVRGSSANALAVKLVCSAEVPCEDVEVADIDLTYNGNEGPISSQCKNVKPI 381

Query: 364 VTGIQKPLICPS 376
           ++G Q P  C S
Sbjct: 382 ISGKQNPRACSS 393

[Close]

BLAST of CmoCh16G011030 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 416.8 bits (1070), Expect = 1.9e-116
Identity = 189/357 (52.94%), Postives = 259/357 (72.55%), Query Frame = 0


Query: 20  PNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGPCKSPIDIVVQGTIMAPVD 79
           P +DIT  L KA+ +AC  P +S ++IPK  Y LG I M+GPCK+PI I + GT+ A  +
Sbjct: 32  PGSDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKADGN 91

Query: 80  ITG-DGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPKCARIPMSLKFSFVKDSIV 139
             G + W+ FR ++   L GGGVFDG+G  AW  N+CHK   C ++P+S++F FV D+ +
Sbjct: 92  ANGKEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKI 151

Query: 140 RDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHMGRCDGVNIINSVIGTGDD 199
           R ITS D+K+FH+N++G KN+TF+ V I AP  S N+DGIH+GR DG+ IINS I TGDD
Sbjct: 152 RGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDD 211

Query: 200 CISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLYVKNCKLIGTTNGLRIKTW 259
           C+S+GDG + + V  VTCGPGHGIS+GSLG+Y  EE V+G+ + NC L  T NGLRIKTW
Sbjct: 212 CVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTW 271

Query: 260 PASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKIPSKIKISKVSFKNIRGSS 319
           P++  T + +D+H+E+I L +V NPI++DQEYCP+N+CN++ PS IK++ +SFK IRG+S
Sbjct: 272 PSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTS 331

Query: 320 GTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNVKPVVTGIQKPLICPS 376
           G   AVKLLCS  YPC++V++ D++I YTG +GP   +CSNV P + G Q P  C S
Sbjct: 332 GNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKACSS 388

[Close]

BLAST of CmoCh16G011030 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 415.6 bits (1067), Expect = 4.2e-116
Identity = 194/364 (53.30%), Postives = 262/364 (71.98%), Query Frame = 0


Query: 12  DVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGPCKSPIDIVVQ 71
           +V T G+   +DITQ L KA+  AC S   SK++IPK  + LG I M GPCK+PI++ +Q
Sbjct: 23  EVFTIGSSSGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQ 82

Query: 72  GTIMAPVD-ITG-DGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPKCARIPMSLK 131
           GT+ A  + I G + W+ F  +D   L GGG FDG+G  AW  N+CHK  +C ++P+S++
Sbjct: 83  GTVKADGNAIQGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIR 142

Query: 132 FSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHMGRCDGVNII 191
           F F+ +S +RDI+S D+KNFH+N+LG KN+T +++ I AP +S N+DGIH+GR DGV I+
Sbjct: 143 FDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKIL 202

Query: 192 NSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLYVKNCKLIGT 251
           NS I TGDDCIS+GDG + + V  VTCGPGHGISVGSLG+Y  E+ V+G+ V NC L  T
Sbjct: 203 NSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQET 262

Query: 252 TNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKIPSKIKISKV 311
            NGLRIKTWP++  + + +D+H+EDI L DV NPI++DQEYCP+N+CN++  S IK+  +
Sbjct: 263 DNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNI 322

Query: 312 SFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNVKPVVTGIQK 371
           SFKNIRG+SG   AVKLLCS  YPC++V++ DIDI Y G +GP    CSNV P + G Q 
Sbjct: 323 SFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQS 382

Query: 372 PLIC 374
           P  C
Sbjct: 383 PKAC 386

[Close]

BLAST of CmoCh16G011030 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 406.4 bits (1043), Expect = 2.5e-113
Identity = 188/364 (51.65%), Postives = 261/364 (71.70%), Query Frame = 0


Query: 12  DVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGPCKSPIDIVVQ 71
           +V   G  P +DITQ L KA+  AC +P  SK++I K  + LG I M GPCK+P++I +Q
Sbjct: 24  EVFNVGGSPGSDITQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQ 83

Query: 72  GTIMAP-VDITG-DGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPKCARIPMSLK 131
           GT+ A    I G + W+ F  ++   L GGG+FDG+G  AW  N+CHK  +C ++P+S++
Sbjct: 84  GTLKADGKAIQGKERWVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIR 143

Query: 132 FSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHMGRCDGVNII 191
           F FV+++ +RDI+S D+KNFH+N+LG KN+TFD+V + AP  S N+DGIH+GR +GV I+
Sbjct: 144 FDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKIL 203

Query: 192 NSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLYVKNCKLIGT 251
           NS I TGDDCIS+GDG + + V NV CGPGHGISVGSLG+Y+ E+ V G+ V NC L GT
Sbjct: 204 NSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGT 263

Query: 252 TNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKIPSKIKISKV 311
            NGLRIKTWP++    + + +H+E+I L +V NPI++DQEYCP+N+CN++ PS IK+  +
Sbjct: 264 DNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDI 323

Query: 312 SFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNVKPVVTGIQK 371
           SFKNIRG+SG   AVKLLCS  +PC +V++ +I++ Y G +GP    CSNV P + G Q 
Sbjct: 324 SFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLVGTQN 383

Query: 372 PLIC 374
           P  C
Sbjct: 384 PKAC 387

[Close]

BLAST of CmoCh16G011030 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 405.6 bits (1041), Expect = 4.3e-113
Identity = 191/369 (51.76%), Postives = 264/369 (71.54%), Query Frame = 0


Query: 7   SDGVFDVTTYGAKPNADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGPCKSPI 66
           S    +V    + P +DITQ L +A+  AC SP   K++IPK  + LG I M GPCKSP+
Sbjct: 19  SANAHEVLRLTSSPGSDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPV 78

Query: 67  DIVVQGTIMAPVD-ITG-DGWIQFRYVDKISLTGGGVFDGQGQKAWASNDCHKNPKCARI 126
           +I + GT++A  + I G + W+ F+ +D   L GGG FDG+G  AW  N+CHK  +C ++
Sbjct: 79  EITLLGTVLADGNSIHGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKL 138

Query: 127 PMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSDGIHMGRCD 186
           P+S++F FV ++ +RDI+S D+KNFH+N++G KN+TFD+V I AP  S N+DGIH+GR  
Sbjct: 139 PISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSV 198

Query: 187 GVNIINSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPVAGLYVKNC 246
           GV+IINS I TGDDC+S+GDG   + V NV CGPGHGISVGSLG+Y  E+ V+G+ V NC
Sbjct: 199 GVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINC 258

Query: 247 KLIGTTNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKCNRKIPSKI 306
            L  T NGLRIKTWP++  + + +++H+E+I L +V NPI++DQEYCP+N+CN++  S I
Sbjct: 259 TLQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSI 318

Query: 307 KISKVSFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSECSNVKPVV 366
           K++ +SF+ IRG+SG   AVKLLCS  YPCE+VQ+ DI+I YTG +GP    CSNV+P +
Sbjct: 319 KLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKL 378

Query: 367 TGIQKPLIC 374
            G Q P  C
Sbjct: 379 VGTQFPKAC 387

[Close]

BLAST of CmoCh16G011030 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 362.1 bits (928), Expect = 5.5e-100
Identity = 173/377 (45.89%), Postives = 247/377 (65.52%), Query Frame = 0


Query: 4   AQSSDGVFDVTTYGAKPN--ADITQILEKAWKDACASPIQSKLIIPKETYTLGVITMLGP 63
           A+      DV   GAK +   D +     AWK+ACA+   S + +PK  Y +  +   GP
Sbjct: 64  AKPGGASLDVKASGAKGDGKTDDSAAFAAAWKEACAA--GSTITVPKGEYLVESLEFKGP 123

Query: 64  CKSPIDIVVQGTIMAPVDITGD----GWIQFRYVDKISLTGG-GVFDGQGQKAWASNDCH 123
           CK P+ + + G   AP  +       GWI F  +   +L G   +FDGQG  AW +NDC 
Sbjct: 124 CKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCA 183

Query: 124 KNPKCARIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTINAPGNSINSD 183
           K  KC  +P++++F+ + +S +  ITS +SK FH+NIL CKN+T   + I+AP  S+N+D
Sbjct: 184 KTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTD 243

Query: 184 GIHMGRCDGVNIINSVIGTGDDCISLGDGSRQVTVTNVTCGPGHGISVGSLGQYLVEEPV 243
           GIH+GR +GVN+I + I TGDDC+S+GDG+  + V NV CGPGHGIS+GSLG+Y  E+PV
Sbjct: 244 GIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPV 303

Query: 244 AGLYVKNCKLIGTTNGLRIKTWPASPATGSVTDMHYEDITLVDVQNPIIVDQEYCPYNKC 303
            G+ V+ C +  T NG+RIKTWP SP  G  +++ +EDIT+ +V  P+++DQEYCPY  C
Sbjct: 304 KGVTVRKCLIKNTDNGVRIKTWPGSP-PGIASNILFEDITMDNVSLPVLIDQEYCPYGHC 363

Query: 304 NRKIPSKIKISKVSFKNIRGSSGTAVAVKLLCSADYPCEDVQLSDIDITYTGREGPVVSE 363
              +PSK+K+S V+ KNI+G+S T VAVKL+CS   PC ++ LSDI++ + G+EGP VS 
Sbjct: 364 KAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSA 423

Query: 364 CSNVKPVVTGIQKPLIC 374
           CSN+KP+++G   P  C
Sbjct: 424 CSNIKPILSGKLVPAAC 437

The following BLAST results are available for this feature:

BLAST of CmoCh16G011030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24548	1.0e-122	56.90	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q40312	5.3e-116	53.39	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
Q6H9K0	1.6e-115	52.42	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
P35337	4.7e-112	50.55	Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1	[more]
Q05967	4.0e-111	50.27	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]

BLAST of CmoCh16G011030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4L3	4.5e-219	99.73	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111440604 PE=3 SV=...	[more]
A0A6J1L5F4	9.2e-212	96.25	exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111500183 PE=3 SV=1	[more]
A0A6J1HJP4	4.6e-211	95.98	exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111465122 PE=3 SV=1	[more]
A0A6J1HKP9	4.6e-211	95.98	exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111465044 PE=3 SV=1	[more]
A0A6J1DUC6	2.1e-160	68.01	exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111024096 PE=3 SV...	[more]

BLAST of CmoCh16G011030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48140.1	1.9e-116	52.94	Pectin lyase-like superfamily protein	[more]
AT3G07820.1	4.2e-116	53.30	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	2.5e-113	51.65	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	4.3e-113	51.76	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	5.5e-100	45.89	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 156..182 e-value: 99.0 score: 11.8 coord: 334..356 e-value: 9400.0 score: 0.3 coord: 183..204 e-value: 1600.0 score: 5.9 coord: 206..226 e-value: 2900.0 score: 4.0 coord: 236..257 e-value: 140.0 score: 11.3
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 2..371 e-value: 2.1E-105 score: 355.0
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 36..361 e-value: 6.8E-100 score: 334.3
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 213..226
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 7..374
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 7..374
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 8..373

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G011030.1	CmoCh16G011030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity