CmoCh16G011020 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G011020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR32-like
Location	Cmo_Chr16: 7765326 .. 7765763 (-)
RNA-Seq Expression	CmoCh16G011020
Synteny	CmoCh16G011020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAACAACAAAAGGTTTCAGATTGAAAATCAAGCTTCCCAACATCTTCAAACGGAGAACCACCTCCAACCCTTTTTCCAAGCTCTTCGCCCTCGCTACGGCGTCGTTTTCTCGCCCGGATGCGTACTCCCGGCTGAACCGGGTCCGGAACGGACCGGAAGCGGCGGCGCCGAAGGGGTATTTGGCCGTGCACGTCGGTGGAGCGGAGGATGAAAGGGAGAGACATCTTGTGCCGCTGATTTACTTCAACCATCCGATGTTTGGGAAATTGCTGCAGGCGGCGGAGAGGATTTATGGGTTTCAGTATCCGGGTCGGATCGTCATTCCGGTTGATGTGTCGGAGTTTGAGGAGGTTACCAATTGCATTGCCACGGCGGAGTACGGCTGCCGCAACCGTCATAGCGGTGGCTACCGGTGGCGGAGCTGTGGAAAGTAG

mRNA sequence

ATGCGAACAACAAAAGGTTTCAGATTGAAAATCAAGCTTCCCAACATCTTCAAACGGAGAACCACCTCCAACCCTTTTTCCAAGCTCTTCGCCCTCGCTACGGCGTCGTTTTCTCGCCCGGATGCGTACTCCCGGCTGAACCGGGTCCGGAACGGACCGGAAGCGGCGGCGCCGAAGGGGTATTTGGCCGTGCACGTCGGTGGAGCGGAGGATGAAAGGGAGAGACATCTTGTGCCGCTGATTTACTTCAACCATCCGATGTTTGGGAAATTGCTGCAGGCGGCGGAGAGGATTTATGGGTTTCAGTATCCGGGTCGGATCGTCATTCCGGTTGATGTGTCGGAGTTTGAGGAGGTTACCAATTGCATTGCCACGGCGGAGTACGGCTGCCGCAACCGTCATAGCGGTGGCTACCGGTGGCGGAGCTGTGGAAAGTAG

Coding sequence (CDS)

ATGCGAACAACAAAAGGTTTCAGATTGAAAATCAAGCTTCCCAACATCTTCAAACGGAGAACCACCTCCAACCCTTTTTCCAAGCTCTTCGCCCTCGCTACGGCGTCGTTTTCTCGCCCGGATGCGTACTCCCGGCTGAACCGGGTCCGGAACGGACCGGAAGCGGCGGCGCCGAAGGGGTATTTGGCCGTGCACGTCGGTGGAGCGGAGGATGAAAGGGAGAGACATCTTGTGCCGCTGATTTACTTCAACCATCCGATGTTTGGGAAATTGCTGCAGGCGGCGGAGAGGATTTATGGGTTTCAGTATCCGGGTCGGATCGTCATTCCGGTTGATGTGTCGGAGTTTGAGGAGGTTACCAATTGCATTGCCACGGCGGAGTACGGCTGCCGCAACCGTCATAGCGGTGGCTACCGGTGGCGGAGCTGTGGAAAGTAG

Protein sequence

MRTTKGFRLKIKLPNIFKRRTTSNPFSKLFALATASFSRPDAYSRLNRVRNGPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVTNCIATAEYGCRNRHSGGYRWRSCGK

Homology

[Close]

BLAST of CmoCh16G011020 vs. ExPASy Swiss-Prot
Match: O22150 (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13
Identity = 38/88 (43.18%), Postives = 57/88 (64.77%), Query Frame = 0


Query: 38  SRPDAYSRLNRVRNGPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAER 97
           +R  AY  ++  +  P    P+G+LA++VG  + +  R LVP++YFNHP+FG+LL+ AE+
Sbjct: 63  TRRSAYIPVDHKKADP---VPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEK 122

Query: 98  IYGFQYPGRIVIPVDVSEFEEVTNCIAT 126
            YGF + G I IP   S+FE V   IA+
Sbjct: 123 EYGFCHEGGITIPCLYSDFERVKTRIAS 147

[Close]

BLAST of CmoCh16G011020 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.6e-12
Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 45  RLNRVRNGPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYP 104
           +L+R ++      PKG LA+ VG   +E++R +VP++YFNHP+F +LL+ AE  YGF   
Sbjct: 12  QLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQK 71

Query: 105 GRIVIPVDVSEFEEVTNCI--ATAEYGCRNRH 135
           G I IP  V EF  V   I    + Y   N H
Sbjct: 72  GTITIPCHVEEFRYVQALIDGERSVYNGNNHH 103

[Close]

BLAST of CmoCh16G011020 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.4e-09
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 52  GPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYP-GRIVIP 111
           G  +AAPKG+LAV+VG  E +++R+LVP+ Y N P F  LL  +E  +GF +P G + IP
Sbjct: 19  GAGSAAPKGFLAVYVG--ESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIP 78

Query: 112 VDVSEFEEVTN 122
                F  VT+
Sbjct: 79  CPEDTFINVTS 87

[Close]

BLAST of CmoCh16G011020 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.4e-08
Identity = 26/70 (37.14%), Postives = 47/70 (67.14%), Query Frame = 0


Query: 55  AAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYP-GRIVIPVDV 114
           ++ P+G++AV+VG  + +++R++VP+ Y N P+F +LL  +E  +G+ +P G + IP   
Sbjct: 19  SSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDHPMGGLTIPCHE 78

Query: 115 SEFEEVTNCI 124
           S F  VT+ I
Sbjct: 79  SLFFTVTSQI 88

[Close]

BLAST of CmoCh16G011020 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-07
Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 58  PKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFE 117
           PKG+  V+VG   + R R++VP+ +  HP F  LLQ AE  +GF +   + IP D   F+
Sbjct: 44  PKGHFPVYVG---ENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQ 103

Query: 118 EVTNCI 124
            +T+ I
Sbjct: 104 TLTSMI 106

[Close]

BLAST of CmoCh16G011020 vs. ExPASy TrEMBL
Match: A0A6J1EBA0 (auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC111431004 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.3e-78
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MRTTKGFRLKIKLPNIFKRRTTSNPFSKLFALATASFSRPDAYSRLNRVRNGPEAAAPKG 60
           MRTTKGFRLKIKLPNIFKRRTTSNPFSKLFALATASFSRPDAYSRLNRVRNGPEAAAPKG
Sbjct: 1   MRTTKGFRLKIKLPNIFKRRTTSNPFSKLFALATASFSRPDAYSRLNRVRNGPEAAAPKG 60

Query: 61  YLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVT 120
           YLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVT
Sbjct: 61  YLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVT 120

Query: 121 NCIATAEYGCRNRHSGGYRWRSCGK 146
           NCIATAEYGCRNRHSGGYRWRSCGK
Sbjct: 121 NCIATAEYGCRNRHSGGYRWRSCGK 145

[Close]

BLAST of CmoCh16G011020 vs. ExPASy TrEMBL
Match: A0A5D3D7D7 (Auxin-responsive protein SAUR32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001430 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.9e-50
Identity = 111/151 (73.51%), Postives = 116/151 (76.82%), Query Frame = 0


Query: 2   RTTKGFRLKIKLPNIFKRR-------TTSNPFSKLFALATASFSRPDAYSRLNRVRNGPE 61
           R TKGF+LKIKL  IFK R       T SNPFSKLF+LATA FSR   Y+RLNRVR+ P 
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHFFDLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRSTPA 62

Query: 62  AAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVS 121
            A PKGYLAVHVGG EDE ERHLVP+IYFNHPMF KLLQAAE IYGF YPGRIVIPVDVS
Sbjct: 63  VATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVS 122

Query: 122 EFEEVTNCIATAEYGCRNRHSGGYRWRSCGK 146
           EFEEV N IA AE G   R SGGYR R CGK
Sbjct: 123 EFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 153

[Close]

BLAST of CmoCh16G011020 vs. ExPASy TrEMBL
Match: A0A1S3BLN7 (auxin-responsive protein SAUR32 OS=Cucumis melo OX=3656 GN=LOC103490920 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.9e-50
Identity = 111/151 (73.51%), Postives = 116/151 (76.82%), Query Frame = 0


Query: 2   RTTKGFRLKIKLPNIFKRR-------TTSNPFSKLFALATASFSRPDAYSRLNRVRNGPE 61
           R TKGF+LKIKL  IFK R       T SNPFSKLF+LATA FSR   Y+RLNRVR+ P 
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHFFNLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRSTPA 62

Query: 62  AAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVS 121
            A PKGYLAVHVGG EDE ERHLVP+IYFNHPMF KLLQAAE IYGF YPGRIVIPVDVS
Sbjct: 63  VATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVS 122

Query: 122 EFEEVTNCIATAEYGCRNRHSGGYRWRSCGK 146
           EFEEV N IA AE G   R SGGYR R CGK
Sbjct: 123 EFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 153

[Close]

BLAST of CmoCh16G011020 vs. ExPASy TrEMBL
Match: A0A0A0L5M2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035310 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.3e-48
Identity = 108/152 (71.05%), Postives = 116/152 (76.32%), Query Frame = 0


Query: 2   RTTKGFRLKIKLPNIFKRRTT-------SNPFSKLFALATASFSRPDAYSRLNRVRNGPE 61
           RTTKGF+LK+KL  +FK RT        SNPFSKLF+LAT  FSRP  Y+RLNRVR+ P 
Sbjct: 3   RTTKGFKLKLKLLKVFKWRTPFFNLHTYSNPFSKLFSLATDPFSRPVRYARLNRVRSTPP 62

Query: 62  AAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVS 121
            A PKGYLAVHVGG E+ERERHLVP+IYFNHPMF KLLQAAE IYGF YPGRIVIPVDVS
Sbjct: 63  VATPKGYLAVHVGGPENERERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVS 122

Query: 122 EFEEVTNCIATAEYG-CRNRHSGGYRWRSCGK 146
           EFEEV N IA  E G C  R  G  RWR CGK
Sbjct: 123 EFEEVKNGIAATENGRCCPRRGGYRRWR-CGK 153

[Close]

BLAST of CmoCh16G011020 vs. ExPASy TrEMBL
Match: A0A6J1KYV6 (auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111498817 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.6e-45
Identity = 100/145 (68.97%), Postives = 109/145 (75.17%), Query Frame = 0


Query: 1   MRTTKGFRLKIKLPNIFKRRTTSNPFSKLFALATASFSRPDAYSRLNRVRNGPEAAAPKG 60
           MRTT+GF+LKIKL  IF    +SN FS LF+LATASFSR   Y RL R R  P    PKG
Sbjct: 1   MRTTRGFKLKIKLLKIFNLPPSSNLFSNLFSLATASFSRRLGYGRLER-RRSPPPPPPKG 60

Query: 61  YLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVT 120
           YL+VHVGG ED+ E HLVP+IYFNHP+FGKLLQAAERIYGF YPGRIVIPV VSEFEEV 
Sbjct: 61  YLSVHVGGPEDQTESHLVPVIYFNHPLFGKLLQAAERIYGFDYPGRIVIPVGVSEFEEVR 120

Query: 121 NCIATAEYGCRNRHSGGYRWRSCGK 146
           NCIA AE+    R SGG R R  GK
Sbjct: 121 NCIAAAEHSRSRRRSGGCRHRLWGK 144

[Close]

BLAST of CmoCh16G011020 vs. TAIR 10
Match: AT4G22620.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-20
Identity = 60/157 (38.22%), Postives = 91/157 (57.96%), Query Frame = 0


Query: 1   MRTTKGFRLKIKLPNIFK-----RRTTS----------NPFSKLFALATASFSRPDAYSR 60
           M+  +GF++  +   IFK     RR  +          NP +K+++LA     R    +R
Sbjct: 1   MKRLRGFKIGHRFVKIFKWIIRSRRNQTGKRQCLTGILNPVTKIYSLARRCLRR--GANR 60

Query: 61  L--------NRVRNGPEA-AAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAE 120
           L         R+ N P+    P+G+L VHVG + ++  R +VP+IYFNHP+FG+LL+ AE
Sbjct: 61  LCGGMKPGQTRLGNEPKTPTVPRGHLVVHVGESGEDTRRVVVPVIYFNHPLFGELLEQAE 120

Query: 121 RIYGFQYPGRIVIPVDVSEFEEVTNCIATAEYGCRNR 134
           R+YGF+ PGRI+IP  VS+FE+V   IA  ++ CR +
Sbjct: 121 RVYGFEQPGRIMIPCRVSDFEKVQMRIAAWDH-CRRK 154

[Close]

BLAST of CmoCh16G011020 vs. TAIR 10
Match: AT4G12410.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 94.4 bits (233), Expect = 8.3e-20
Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 0


Query: 45  RLNRVRNGPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYP 104
           RL +         P+G+L VHVG ++D+  R +VP+IYFNHP+FG+LL+ AER++GF  P
Sbjct: 64  RLGKDPKKSNRVVPRGHLVVHVGESDDDTRRVVVPVIYFNHPLFGELLEQAERVHGFDQP 123

Query: 105 GRIVIPVDVSEFEEVTNCIATAEYGCRNRHS 136
           GRI IP  VS+FE+V   IA  ++ CR ++S
Sbjct: 124 GRITIPCRVSDFEKVQLRIAAWDH-CRRKNS 153

[Close]

BLAST of CmoCh16G011020 vs. TAIR 10
Match: AT2G45210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 77.4 bits (189), Expect = 1.0e-14
Identity = 38/88 (43.18%), Postives = 57/88 (64.77%), Query Frame = 0


Query: 38  SRPDAYSRLNRVRNGPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAER 97
           +R  AY  ++  +  P    P+G+LA++VG  + +  R LVP++YFNHP+FG+LL+ AE+
Sbjct: 63  TRRSAYIPVDHKKADP---VPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEK 122

Query: 98  IYGFQYPGRIVIPVDVSEFEEVTNCIAT 126
            YGF + G I IP   S+FE V   IA+
Sbjct: 123 EYGFCHEGGITIPCLYSDFERVKTRIAS 147

[Close]

BLAST of CmoCh16G011020 vs. TAIR 10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 75.9 bits (185), Expect = 3.0e-14
Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 58  PKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFE 117
           PKG LA+ VG  E+E++R +VP+ YFNHP+F +LL+ AE  YGF+  G I IP  V  F 
Sbjct: 31  PKGCLAIKVGSKEEEKQRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVFR 90

Query: 118 EVTNCI-----------ATAEYGCRNRHSGGYRWRS 143
            V + I           A+ + GC  +H   ++ RS
Sbjct: 91  YVQDMINRERSLDDDDDASKQTGCGAKHGLTHKIRS 126

[Close]

BLAST of CmoCh16G011020 vs. TAIR 10
Match: AT3G60690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 49  VRNGPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIV 108
           +R  P+   PKG+ AV++G  + + +R LVP++YFNHP+FG+LL+ AE  +GF   G I 
Sbjct: 81  IREKPD-PVPKGHSAVYIGKKDGDFQRVLVPIVYFNHPLFGELLREAEEEFGFSQEGGIT 140

Query: 109 IPVDVSEFEEVTNCIATAEYGCR 132
           IP   S+F+ V   I +    C+
Sbjct: 141 IPCPYSDFKRVQTRIESGSGFCK 162

The following BLAST results are available for this feature:

BLAST of CmoCh16G011020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22150	1.5e-13	43.18	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 S...	[more]
Q9ZUZ3	3.6e-12	41.30	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
Q9FK62	6.4e-09	45.07	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q41220	5.4e-08	37.14	Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 S...	[more]
O65695	4.6e-07	39.39	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]

BLAST of CmoCh16G011020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBA0	2.3e-78	100.00	auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC1114310...	[more]
A0A5D3D7D7	5.9e-50	73.51	Auxin-responsive protein SAUR32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BLN7	5.9e-50	73.51	auxin-responsive protein SAUR32 OS=Cucumis melo OX=3656 GN=LOC103490920 PE=3 SV=...	[more]
A0A0A0L5M2	4.3e-48	71.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035310 PE=3 SV=1	[more]
A0A6J1KYV6	2.6e-45	68.97	auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111498817 PE=3 ...	[more]

BLAST of CmoCh16G011020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22620.1	1.3e-20	38.22	SAUR-like auxin-responsive protein family	[more]
AT4G12410.1	8.3e-20	48.35	SAUR-like auxin-responsive protein family	[more]
AT2G45210.1	1.0e-14	43.18	SAUR-like auxin-responsive protein family	[more]
AT3G61900.1	3.0e-14	40.63	SAUR-like auxin-responsive protein family	[more]
AT3G60690.1	1.2e-13	40.96	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 51..122 e-value: 2.5E-17 score: 62.8
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 39..132
None	No IPR available	PANTHER	PTHR31374:SF210	AUXIN-RESPONSIVE PROTEIN-LIKE	coord: 39..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G011020.1	CmoCh16G011020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin