Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGCACGATCGCATCCAGTAGTAGCTTACGCGCTGCTTTCTCGCACTGCGTACAGCAAGTGCGAAGCTATGACTACCATCACTACCTCTGCCTCTTGGAACTTCCCCCTTCGATGAGGAAGGCTGCATTTGCACTTCGAGCATTTAACGTTGAAACATCAAGAGCCATGGACGTTGCTACCGATCCCAGGATCGGTCTCATGCGACTCGTGTGGTGGCAGGAAGCTATCGACAAAATATACGCTAGCAAAAAGATCGAACATCCAATAGCACAAGCCCTTTCATCTGTGATATCTGAGAACAAAATAAGCAAACTGTGGCTGAAACGATCTGTCGAAGCTCGTATTAACGACGCCAGAAGGGAGGACACCGAAATTCCAGAAACCATTGATGAGCTAGAGAAATATGCTGAAGATACTGCATCAACACTACTCTACATGACCCTTCAATCCGGTGGCATTAGGTCGACAGCAGCCGATCACGCAGCATCTCATATCGGCAAGGCAGGAGGGCTGCTTTTGTTGCTCAAGTCATTACCATATCACGCTACTCGAAATCGCCATTGTTTTTACATTCCTGTCAAAGTGGCCGAAGAGCACGGTCTGCTGGCTAAGCAGGGAGGGCGTTTCGAGATACGCTTAGATTCGAGAGAGAGGCTATGTGATGCAGTGTTTGATATGGCTTCTGTAGCCAATGCTCATTTGCGAAAAGCTCGAGACTTGGCCGGGACCGTGCCGAAGGAGGCGCTGCCTGTGCTTTTGCAGGCTGTGCCTGCTCAAGTTCTGTTGGATTCTTTAAGAAAGGTAGAGTTTGATGTGTTTGATCCAAGGCTACAACGTGGAGTTTTGGGTGTTCCTCCTTTGTGGTTTCAACTCAAATTGAAGTGGTCTTCTTTGAGGGGAAAATATTAA
mRNA sequence
ATGAATGGCACGATCGCATCCAGTAGTAGCTTACGCGCTGCTTTCTCGCACTGCGTACAGCAAGTGCGAAGCTATGACTACCATCACTACCTCTGCCTCTTGGAACTTCCCCCTTCGATGAGGAAGGCTGCATTTGCACTTCGAGCATTTAACGTTGAAACATCAAGAGCCATGGACGTTGCTACCGATCCCAGGATCGGTCTCATGCGACTCGTGTGGTGGCAGGAAGCTATCGACAAAATATACGCTAGCAAAAAGATCGAACATCCAATAGCACAAGCCCTTTCATCTGTGATATCTGAGAACAAAATAAGCAAACTGTGGCTGAAACGATCTGTCGAAGCTCGTATTAACGACGCCAGAAGGGAGGACACCGAAATTCCAGAAACCATTGATGAGCTAGAGAAATATGCTGAAGATACTGCATCAACACTACTCTACATGACCCTTCAATCCGGTGGCATTAGGTCGACAGCAGCCGATCACGCAGCATCTCATATCGGCAAGGCAGGAGGGCTGCTTTTGTTGCTCAAGTCATTACCATATCACGCTACTCGAAATCGCCATTGTTTTTACATTCCTGTCAAAGTGGCCGAAGAGCACGGTCTGCTGGCTAAGCAGGGAGGGCGTTTCGAGATACGCTTAGATTCGAGAGAGAGGCTATGTGATGCAGTGTTTGATATGGCTTCTGTAGCCAATGCTCATTTGCGAAAAGCTCGAGACTTGGCCGGGACCGTGCCGAAGGAGGCGCTGCCTGTGCTTTTGCAGGCTGTGCCTGCTCAAGTTCTGTTGGATTCTTTAAGAAAGGTAGAGTTTGATGTGTTTGATCCAAGGCTACAACGTGGAGTTTTGGGTGTTCCTCCTTTGTGGTTTCAACTCAAATTGAAGTGGTCTTCTTTGAGGGGAAAATATTAA
Coding sequence (CDS)
ATGAATGGCACGATCGCATCCAGTAGTAGCTTACGCGCTGCTTTCTCGCACTGCGTACAGCAAGTGCGAAGCTATGACTACCATCACTACCTCTGCCTCTTGGAACTTCCCCCTTCGATGAGGAAGGCTGCATTTGCACTTCGAGCATTTAACGTTGAAACATCAAGAGCCATGGACGTTGCTACCGATCCCAGGATCGGTCTCATGCGACTCGTGTGGTGGCAGGAAGCTATCGACAAAATATACGCTAGCAAAAAGATCGAACATCCAATAGCACAAGCCCTTTCATCTGTGATATCTGAGAACAAAATAAGCAAACTGTGGCTGAAACGATCTGTCGAAGCTCGTATTAACGACGCCAGAAGGGAGGACACCGAAATTCCAGAAACCATTGATGAGCTAGAGAAATATGCTGAAGATACTGCATCAACACTACTCTACATGACCCTTCAATCCGGTGGCATTAGGTCGACAGCAGCCGATCACGCAGCATCTCATATCGGCAAGGCAGGAGGGCTGCTTTTGTTGCTCAAGTCATTACCATATCACGCTACTCGAAATCGCCATTGTTTTTACATTCCTGTCAAAGTGGCCGAAGAGCACGGTCTGCTGGCTAAGCAGGGAGGGCGTTTCGAGATACGCTTAGATTCGAGAGAGAGGCTATGTGATGCAGTGTTTGATATGGCTTCTGTAGCCAATGCTCATTTGCGAAAAGCTCGAGACTTGGCCGGGACCGTGCCGAAGGAGGCGCTGCCTGTGCTTTTGCAGGCTGTGCCTGCTCAAGTTCTGTTGGATTCTTTAAGAAAGGTAGAGTTTGATGTGTTTGATCCAAGGCTACAACGTGGAGTTTTGGGTGTTCCTCCTTTGTGGTTTCAACTCAAATTGAAGTGGTCTTCTTTGAGGGGAAAATATTAA
Protein sequence
MNGTIASSSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTEIPETIDELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSLPYHATRNRHCFYIPVKVAEEHGLLAKQGGRFEIRLDSRERLCDAVFDMASVANAHLRKARDLAGTVPKEALPVLLQAVPAQVLLDSLRKVEFDVFDPRLQRGVLGVPPLWFQLKLKWSSLRGKY
Homology
BLAST of CmoCh16G011010 vs. ExPASy Swiss-Prot
Match:
A7YVD7 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos taurus OX=9913 GN=NDUFAF6 PE=2 SV=1)
HSP 1 Score: 194.1 bits (492), Expect = 2.3e-48
Identity = 106/280 (37.86%), Postives = 167/280 (59.64%), Query Frame = 0
Query: 4 TIASSSSLRAAFS--HCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA 63
++A+ S L A+ + +C++ +R DY YLC L LP R +AFALRAFNVE ++ D
Sbjct: 45 SVAAGSGLGASGTDRYCLELLRKRDYEGYLCSLLLPAESRSSAFALRAFNVELAQIKDSV 104
Query: 64 TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 123
++ IGLMR+ +W++ +D IY+ P+A L + + ++K WL + ++ R +
Sbjct: 105 SEKTIGLMRMQFWKKTVDDIYSDNPPHQPVAIELWKAVRRHNLTKRWLMKIIDER---EK 164
Query: 124 REDTEIPETIDELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSLP 183
D + I ELE YAE+T S+LLY+TL+ GI+ ADHAASHIGKA G++ L++ P
Sbjct: 165 NLDDKAYRNIQELENYAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATP 224
Query: 184 YHATRNRHCFYIPVKVAEEHGLLAKQGGRFEIRLDSRERLCDAVFDMASVANAHLRKARD 243
YH +R R ++P+ + HG+ + +R + D V+D+AS A+ HL+ AR
Sbjct: 225 YHGSRRR--VFLPMDICMLHGVSQED----FLRKSQDRNVRDVVYDVASQAHLHLKHARS 284
Query: 244 LAGTVPKEALPVLLQAVPAQVLLDSLRKVEFDVFDPRLQR 282
++P +A P LQ V + L +++V+FD+F P LQR
Sbjct: 285 FHRSIPVKAFPAFLQTVALEDYLKKIQQVDFDLFHPSLQR 315
BLAST of CmoCh16G011010 vs. ExPASy Swiss-Prot
Match:
A2AIL4 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Mus musculus OX=10090 GN=Ndufaf6 PE=1 SV=1)
HSP 1 Score: 193.0 bits (489), Expect = 5.0e-48
Identity = 105/299 (35.12%), Postives = 175/299 (58.53%), Query Frame = 0
Query: 6 ASSSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVATDPR 65
AS + + +C++ +R DY YLC L P +++A ALRAFNVE ++ D ++
Sbjct: 49 ASGPGIPGSHLYCLELLRKRDYESYLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKT 108
Query: 66 IGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDT 125
IGLMR+ +W++A++ +Y P+A L + ++ ++K WL R ++ R + D
Sbjct: 109 IGLMRMQFWKKAVEDMYCDNPPHQPVAIELWKAVKKHNLTKRWLMRIIDER---EKNLDD 168
Query: 126 EIPETIDELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSLPYHAT 185
+ ++ ELE YAE+T +LLY+TL+ G++ ADHAASHIGKA G++ L++ PYH++
Sbjct: 169 KAYRSMQELENYAENTQGSLLYLTLEVLGVKDLHADHAASHIGKAQGIVTCLRATPYHSS 228
Query: 186 RNRHCFYIPVKVAEEHGLLAKQGGRFEIRLDSRERLCDAVFDMASVANAHLRKARDLAGT 245
R + ++P+ V +HG+ + +R + + + D V+D+AS A+ HL+ AR +
Sbjct: 229 RRQ--VFLPMDVCVQHGVSQED----FLRRNQDKNVRDVVYDIASQAHLHLKHARSFHRS 288
Query: 246 VPKEALPVLLQAVPAQVLLDSLRKVEFDVFDPRLQRGVLGVPPLWFQLKLKWSSLRGKY 305
VP EA P LQ V + L +++V+FD+F P LQ+ + +P L L S R +Y
Sbjct: 289 VPAEAFPAFLQTVSLEDYLKKIQRVDFDIFHPSLQQKNMLLP-----LSLYIQSWRKRY 333
BLAST of CmoCh16G011010 vs. ExPASy Swiss-Prot
Match:
Q330K2 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Homo sapiens OX=9606 GN=NDUFAF6 PE=1 SV=2)
HSP 1 Score: 191.4 bits (485), Expect = 1.5e-47
Identity = 100/265 (37.74%), Postives = 158/265 (59.62%), Query Frame = 0
Query: 17 HCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVATDPRIGLMRLVWWQE 76
+C++ +R DY YLC L LP R + FALRAFNVE ++ D ++ IGLMR+ +W++
Sbjct: 60 YCLELLRKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTIGLMRMQFWKK 119
Query: 77 AIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTEIPETIDELEK 136
++ IY P+A L + + ++K WL + V+ R + D + I ELE
Sbjct: 120 TVEDIYCDNPPHQPVAIELWKAVKRHNLTKRWLMKIVDER---EKNLDDKAYRNIKELEN 179
Query: 137 YAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSLPYHATRNRHCFYIPVK 196
YAE+T S+LLY+TL+ GI+ ADHAASHIGKA G++ L++ PYH +R + ++P+
Sbjct: 180 YAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRK--VFLPMD 239
Query: 197 VAEEHGLLAKQGGRFEIRLDSRERLCDAVFDMASVANAHLRKARDLAGTVPKEALPVLLQ 256
+ HG+ + +R + + + D ++D+AS A+ HL+ AR TVP +A P LQ
Sbjct: 240 ICMLHGVSQED----FLRRNQDKNVRDVIYDIASQAHLHLKHARSFHKTVPVKAFPAFLQ 299
Query: 257 AVPAQVLLDSLRKVEFDVFDPRLQR 282
V + L +++V+FD+F P LQ+
Sbjct: 300 TVSLEDFLKKIQRVDFDIFHPSLQQ 315
BLAST of CmoCh16G011010 vs. ExPASy Swiss-Prot
Match:
D3ZN43 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Rattus norvegicus OX=10116 GN=Ndufaf6 PE=3 SV=1)
HSP 1 Score: 191.0 bits (484), Expect = 1.9e-47
Identity = 100/276 (36.23%), Postives = 165/276 (59.78%), Query Frame = 0
Query: 6 ASSSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVATDPR 65
AS + + +C++ +R DY YLC L P +++A ALRAFNVE ++ D ++
Sbjct: 49 ASGPGIPDSHLYCLELLRKRDYESYLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKT 108
Query: 66 IGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDT 125
IGLMR+ +W++A++ ++ P+A L + + ++K WL R ++ R + D
Sbjct: 109 IGLMRMQFWRKAVEDMFCDNPPHQPVAMELWKAVKRHNLTKRWLLRIIDER---EKNLDD 168
Query: 126 EIPETIDELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSLPYHAT 185
+ +I ELE YAE+T S+LLY+TL+ G++ ADHAASHIGKA G++ L++ PYH++
Sbjct: 169 KAYRSIRELETYAENTQSSLLYLTLEVLGVKDVHADHAASHIGKAQGIVTCLRATPYHSS 228
Query: 186 RNRHCFYIPVKVAEEHGLLAKQGGRFEIRLDSRERLCDAVFDMASVANAHLRKARDLAGT 245
R + ++P+ V +HG+ + +R + + + D V+D+AS A+ HL+ AR
Sbjct: 229 RRQ--VFLPMDVCVQHGVSQED----FLRRNQDKNVRDVVYDIASQAHLHLKHARSFHSR 288
Query: 246 VPKEALPVLLQAVPAQVLLDSLRKVEFDVFDPRLQR 282
VP EA P LQ V + L +++V+FD+F P LQ+
Sbjct: 289 VPAEAFPAFLQTVSLEDYLKKIQRVDFDIFHPSLQQ 315
BLAST of CmoCh16G011010 vs. ExPASy Swiss-Prot
Match:
Q9VYS5 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog OS=Drosophila melanogaster OX=7227 GN=sicily PE=1 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 1.3e-43
Identity = 107/263 (40.68%), Postives = 154/263 (58.56%), Query Frame = 0
Query: 17 HCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMD-VATDPRIGLMRLVWWQ 76
HC+ V YDY +YLC L LP +R+AAFALRAFNVE SR++ +P+I MRL +W
Sbjct: 55 HCMSLVEKYDYENYLCTLLLPRELRRAAFALRAFNVEVSRSVSGHQIEPQIAKMRLKFWH 114
Query: 77 EAIDKIY-----ASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTEIPET 136
++IDK + S + P+ + L + K++K++L+R V AR R T E+
Sbjct: 115 DSIDKCFEPDSQRSYVEDQPVLRELKHTVGSRKLNKVYLRRLVTAR----ERPPTHAFES 174
Query: 137 IDELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSLPYHATRNRHC 196
I ELE+Y E T S+LL + L+ GG+R ADHAASH+GKA G+ LL+S+P + C
Sbjct: 175 IRELEEYTEQTFSSLLLLLLEVGGVRDLNADHAASHLGKAQGIATLLRSIPLAGRQQAPC 234
Query: 197 FYIPVKVAEEHGLLAKQGGRFEIRLDSRER-LCDAVFDMASVANAHLRKARDLAGTVPKE 256
IP++V HG+ ++ IR S ++ + D +FD+AS AN HL+ AR L VP +
Sbjct: 235 --IPLEVLVLHGVSQER----IIRSKSDDKGVEDCIFDVASAANTHLKLARQLHDKVPPQ 294
Query: 257 ALPVLLQAVPAQVLLDSLRKVEF 273
+ L AV L+ LR+ F
Sbjct: 295 VRKIFLSAVATDAYLERLRRANF 307
BLAST of CmoCh16G011010 vs. ExPASy TrEMBL
Match:
A0A6J1EBG5 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 OS=Cucurbita moschata OX=3662 GN=LOC111431051 PE=4 SV=1)
HSP 1 Score: 602.1 bits (1551), Expect = 1.3e-168
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
Query: 1 MNGTIASSSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDV 60
MNGTIASSSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDV
Sbjct: 1 MNGTIASSSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDV 60
Query: 61 ATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDA 120
ATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDA
Sbjct: 61 ATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDA 120
Query: 121 RREDTEIPETIDELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSL 180
RREDTEIPETIDELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSL
Sbjct: 121 RREDTEIPETIDELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSL 180
Query: 181 PYHATRNRHCFYIPVKVAEEHGLLAKQGGRFEIRLDSRERLCDAVFDMASVANAHLRKAR 240
PYHATRNRHCFYIPVKVAEEHGLLAKQGGRFEIRLDSRERLCDAVFDMASVANAHLRKAR
Sbjct: 181 PYHATRNRHCFYIPVKVAEEHGLLAKQGGRFEIRLDSRERLCDAVFDMASVANAHLRKAR 240
Query: 241 DLAGTVPKEALPVLLQAVPAQVLLDSLRKVEFDVFDPRLQRGVLGVPPLWFQLKLKWSSL 300
DLAGTVPKEALPVLLQAVPAQVLLDSLRKVEFDVFDPRLQRGVLGVPPLWFQLKLKWSSL
Sbjct: 241 DLAGTVPKEALPVLLQAVPAQVLLDSLRKVEFDVFDPRLQRGVLGVPPLWFQLKLKWSSL 300
Query: 301 RGKY 305
RGKY
Sbjct: 301 RGKY 304
BLAST of CmoCh16G011010 vs. ExPASy TrEMBL
Match:
A0A6J1HJI4 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111465080 PE=4 SV=1)
HSP 1 Score: 586.3 bits (1510), Expect = 7.5e-164
Identity = 297/304 (97.70%), Postives = 301/304 (99.01%), Query Frame = 0
Query: 1 MNGTIASSSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDV 60
MNGTIA SSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDV
Sbjct: 1 MNGTIA-SSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDV 60
Query: 61 ATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDA 120
ATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDA
Sbjct: 61 ATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDA 120
Query: 121 RREDTEIPETIDELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSL 180
RREDTEIPET+DELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSL
Sbjct: 121 RREDTEIPETMDELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSL 180
Query: 181 PYHATRNRHCFYIPVKVAEEHGLLAKQGGRFEIRLDSRERLCDAVFDMASVANAHLRKAR 240
PYHATRNRHC YIPVKVAEEHGLLAKQGGRFE+ LDSRERLCDAVF+MASVANAHLRKAR
Sbjct: 181 PYHATRNRHCSYIPVKVAEEHGLLAKQGGRFEMHLDSRERLCDAVFEMASVANAHLRKAR 240
Query: 241 DLAGTVPKEALPVLLQAVPAQVLLDSLRKVEFDVFDPRLQRGVLGVPPLWFQLKLKWSSL 300
DL+GTVPKEALPVLLQAVPAQVLLDSLRKVEFDVFDPRLQRGVLGVPPLWFQLKLKWSSL
Sbjct: 241 DLSGTVPKEALPVLLQAVPAQVLLDSLRKVEFDVFDPRLQRGVLGVPPLWFQLKLKWSSL 300
Query: 301 RGKY 305
RGKY
Sbjct: 301 RGKY 303
BLAST of CmoCh16G011010 vs. ExPASy TrEMBL
Match:
A0A6J1DFV8 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 OS=Momordica charantia OX=3673 GN=LOC111020431 PE=4 SV=1)
HSP 1 Score: 556.2 bits (1432), Expect = 8.4e-155
Identity = 280/304 (92.11%), Postives = 291/304 (95.72%), Query Frame = 0
Query: 1 MNGTIASSSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDV 60
MNGT A SSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDV
Sbjct: 1 MNGTFA-SSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDV 60
Query: 61 ATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDA 120
A+DPRIGLMRLVWWQEAIDKIYA KKIEHPIAQALSSV+SENKISKLW+KRSVEARINDA
Sbjct: 61 ASDPRIGLMRLVWWQEAIDKIYAGKKIEHPIAQALSSVVSENKISKLWMKRSVEARINDA 120
Query: 121 RREDTEIPETIDELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSL 180
R EDT+IP TIDELEKYAEDTASTL+YMTLQ+GGIRST ADHAASHIGKAGGLLLLLK+L
Sbjct: 121 RWEDTDIPGTIDELEKYAEDTASTLIYMTLQAGGIRSTVADHAASHIGKAGGLLLLLKAL 180
Query: 181 PYHATRNRHCFYIPVKVAEEHGLLAKQGGRFEIRLDSRERLCDAVFDMASVANAHLRKAR 240
PYHATRNRH YIPVKVAE HGLLAKQGGRFEI+LDSRE LCDAVF+MASVANAHL+KAR
Sbjct: 181 PYHATRNRHSSYIPVKVAENHGLLAKQGGRFEIQLDSRESLCDAVFEMASVANAHLQKAR 240
Query: 241 DLAGTVPKEALPVLLQAVPAQVLLDSLRKVEFDVFDPRLQRGVLGVPPLWFQLKLKWSSL 300
DL GTVPKEALPVLLQAVPAQVLLDSLRKV FDVFDPRLQRGVLGVPPLWFQL+LKWSS
Sbjct: 241 DLVGTVPKEALPVLLQAVPAQVLLDSLRKVHFDVFDPRLQRGVLGVPPLWFQLRLKWSSW 300
Query: 301 RGKY 305
RGKY
Sbjct: 301 RGKY 303
BLAST of CmoCh16G011010 vs. ExPASy TrEMBL
Match:
A0A1S3BK62 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490921 PE=4 SV=1)
HSP 1 Score: 555.4 bits (1430), Expect = 1.4e-154
Identity = 282/304 (92.76%), Postives = 291/304 (95.72%), Query Frame = 0
Query: 1 MNGTIASSSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDV 60
MNGT A SSSLRAAFSHCVQQVRSYDYHHYLCLLELPP+MRKAAFALRAFNVETSRAMDV
Sbjct: 1 MNGTFA-SSSLRAAFSHCVQQVRSYDYHHYLCLLELPPAMRKAAFALRAFNVETSRAMDV 60
Query: 61 ATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDA 120
ATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDA
Sbjct: 61 ATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDA 120
Query: 121 RREDTEIPETIDELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSL 180
RREDT+IP TIDELEKYAEDTASTLLYMTLQ+GGIRST ADHAASHIGKA GLLLLLKSL
Sbjct: 121 RREDTDIPTTIDELEKYAEDTASTLLYMTLQAGGIRSTTADHAASHIGKASGLLLLLKSL 180
Query: 181 PYHATRNRHCFYIPVKVAEEHGLLAKQGGRFEIRLDSRERLCDAVFDMASVANAHLRKAR 240
PYHATRNRH YIPVKVAE HGLLAKQG FEIRLDSRE LCDAVF+MASVANAHL+KAR
Sbjct: 181 PYHATRNRHFSYIPVKVAENHGLLAKQGVHFEIRLDSRESLCDAVFEMASVANAHLQKAR 240
Query: 241 DLAGTVPKEALPVLLQAVPAQVLLDSLRKVEFDVFDPRLQRGVLGVPPLWFQLKLKWSSL 300
DLAGTVP+EALPVLLQAVPAQVLLDSLRKV+FDVFDPRLQRGVLGV PLWFQ++LKWSS
Sbjct: 241 DLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDPRLQRGVLGVSPLWFQMRLKWSSW 300
Query: 301 RGKY 305
RGKY
Sbjct: 301 RGKY 303
BLAST of CmoCh16G011010 vs. ExPASy TrEMBL
Match:
A0A1S4DXI0 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490921 PE=4 SV=1)
HSP 1 Score: 555.4 bits (1430), Expect = 1.4e-154
Identity = 282/304 (92.76%), Postives = 291/304 (95.72%), Query Frame = 0
Query: 1 MNGTIASSSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDV 60
MNGT A SSSLRAAFSHCVQQVRSYDYHHYLCLLELPP+MRKAAFALRAFNVETSRAMDV
Sbjct: 24 MNGTFA-SSSLRAAFSHCVQQVRSYDYHHYLCLLELPPAMRKAAFALRAFNVETSRAMDV 83
Query: 61 ATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDA 120
ATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDA
Sbjct: 84 ATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDA 143
Query: 121 RREDTEIPETIDELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSL 180
RREDT+IP TIDELEKYAEDTASTLLYMTLQ+GGIRST ADHAASHIGKA GLLLLLKSL
Sbjct: 144 RREDTDIPTTIDELEKYAEDTASTLLYMTLQAGGIRSTTADHAASHIGKASGLLLLLKSL 203
Query: 181 PYHATRNRHCFYIPVKVAEEHGLLAKQGGRFEIRLDSRERLCDAVFDMASVANAHLRKAR 240
PYHATRNRH YIPVKVAE HGLLAKQG FEIRLDSRE LCDAVF+MASVANAHL+KAR
Sbjct: 204 PYHATRNRHFSYIPVKVAENHGLLAKQGVHFEIRLDSRESLCDAVFEMASVANAHLQKAR 263
Query: 241 DLAGTVPKEALPVLLQAVPAQVLLDSLRKVEFDVFDPRLQRGVLGVPPLWFQLKLKWSSL 300
DLAGTVP+EALPVLLQAVPAQVLLDSLRKV+FDVFDPRLQRGVLGV PLWFQ++LKWSS
Sbjct: 264 DLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDPRLQRGVLGVSPLWFQMRLKWSSW 323
Query: 301 RGKY 305
RGKY
Sbjct: 324 RGKY 326
BLAST of CmoCh16G011010 vs. TAIR 10
Match:
AT1G62730.1 (Terpenoid synthases superfamily protein )
HSP 1 Score: 446.4 bits (1147), Expect = 1.8e-125
Identity = 230/306 (75.16%), Postives = 255/306 (83.33%), Query Frame = 0
Query: 1 MNGTIASSSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDV 60
MNG SSSLR+A S+CVQQVR+YDYHHYLCLLELP MRKAAFALRAFNVET+RAMDV
Sbjct: 1 MNG--GGSSSLRSALSYCVQQVRNYDYHHYLCLLELPTEMRKAAFALRAFNVETARAMDV 60
Query: 61 ATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDA 120
A+DP+IGLMRL+WWQEAIDK+Y K I HP AQALS ISE+ ISK WLKRSV+ARI DA
Sbjct: 61 ASDPKIGLMRLLWWQEAIDKLYTKKPINHPAAQALSWAISEHNISKPWLKRSVDARIRDA 120
Query: 121 RREDTEIPETIDELEKYAEDTASTLLYMTLQSGGIRSTAADHAASHIGKAGGLLLLLKSL 180
+RE +IPE+I ELEKYAEDT STLLY TLQ+GGI ST ADHAASHIGKA GL+LLLKSL
Sbjct: 121 QREVDDIPESIAELEKYAEDTVSTLLYNTLQAGGISSTTADHAASHIGKASGLVLLLKSL 180
Query: 181 PYHATRNRHCFYIPVKVAEEHGLLAKQGGRFEIRL--DSRERLCDAVFDMASVANAHLRK 240
PYH TRNRH YIP +AE+HGLL KQGGR EI L DSRE L + VF++ASVANAHL K
Sbjct: 181 PYHCTRNRHQSYIPADLAEKHGLLVKQGGRLEILLDNDSREGLSNVVFEIASVANAHLLK 240
Query: 241 ARDLAGTVPKEALPVLLQAVPAQVLLDSLRKVEFDVFDPRLQRGVLGVPPLWFQLKLKWS 300
AR+LAG VP EA PVLL +VP QVLLDSL KV+FDVFDPR+QRGVLGVPPL FQ KLKW
Sbjct: 241 ARELAGKVPAEAKPVLLHSVPVQVLLDSLNKVQFDVFDPRIQRGVLGVPPLLFQFKLKWY 300
Query: 301 SLRGKY 305
S R +
Sbjct: 301 SWRAMF 304
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
A7YVD7 | 2.3e-48 | 37.86 | NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos taurus OX=99... | [more] |
A2AIL4 | 5.0e-48 | 35.12 | NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Mus musculus OX=... | [more] |
Q330K2 | 1.5e-47 | 37.74 | NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Homo sapiens OX=... | [more] |
D3ZN43 | 1.9e-47 | 36.23 | NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Rattus norvegicu... | [more] |
Q9VYS5 | 1.3e-43 | 40.68 | NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog OS=Drosophi... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EBG5 | 1.3e-168 | 100.00 | NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 OS=Cucurbita moscha... | [more] |
A0A6J1HJI4 | 7.5e-164 | 97.70 | NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 OS=Cucurbita maxima... | [more] |
A0A6J1DFV8 | 8.4e-155 | 92.11 | NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 OS=Momordica charan... | [more] |
A0A1S3BK62 | 1.4e-154 | 92.76 | NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X2 OS=Cucum... | [more] |
A0A1S4DXI0 | 1.4e-154 | 92.76 | NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X1 OS=Cucum... | [more] |
Match Name | E-value | Identity | Description | |
AT1G62730.1 | 1.8e-125 | 75.16 | Terpenoid synthases superfamily protein | [more] |