CmoCh16G010940 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G010940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	C2H2-type domain-containing protein
Location	Cmo_Chr16: 7725276 .. 7726370 (+)
RNA-Seq Expression	CmoCh16G010940
Synteny	CmoCh16G010940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGCGTTCATTAGATTTCGGAATTTATCGTTCCAATTCCGTAAGGAAACTGAATTAAATAGACGTTTTCATTCCGGAACGAATCTGAAATCCACTTCTCCGGATTCTTCCTGCTCTGCCGTTGCGATTTTCTGGGATTTGGACAATAAACCACCGAAATCGTTACCGCCTTACGAAGCTGCTGTTAAGCTCAAGGCTGCAGCGGCTTCCTTTGGCGCCATTCGGTACATGGTGGCTTATGCGAATCGGCATGCGTTCAGCTATGTGCCGCAAGTTGTTAGAGAGAAAAGGAGAGAGAGGAAGATGCTTAATCAATTGGAGAGGAAAGGTGTGATTAAATCGATTGAGCCGTATCTGTGTCGTGTTTGTGGGAGAAATTTCTATACGAATGAGAAGTTAGTGAATCATTTTAAGCAAATTCATGAGAGTGAGCATACGAAGAGGTTGAATCAGATCGAATCTGCCAAGGGTAGTAGAAGAGTGAAGTTGCTCGCTAAGTATTCGATGAAAATACAGAAGTATAAGAATGGTGCTAGGGATGTTTTGACTCCGAAAGAGGGATATGGTCTAGCAGATGAGTTGAAGAGGGCAGGGTTTTTTGTGAAGACTGTGTCGGATAAGCCTGAAGCTGCCGATGTAGAATTGAGAAACGACATGGTTGAGGTCATGGATAGGAGAAGAGCAGAGTGTTTGGTTCTTGTATCAAATGATTCTGATTTTGTGAATGTTTTGAAGGAGGCCAAGTTGAGATGTCTTAGAACAGTTGTTGTTGGGGATCTTAATGATGGGCCATTGAAGAGAAATGCTGATACTGGGTTTTCTTGGAAGGAGATTTTAATGGGGAAGGCTAAGAAGGAGGCTGTGTCTGTTGTGGGAAAATGGAAGGATCGGGACGTTTTGAAGAGATTGGAATGGACATACAATCCTCAATTGGAGAAGGAAGTGTTTGGTTTGGATGATGATATGGGCGAGGATGAAGATGTTGACCAAGGTTCGGTTGATGAGAATATGACAAATGGTGACAGTGGTGCTTGGTGGGATCTCAGCTCTGATGCTGAAACTGAAGCTGTGTCGTCACGATCATGTAAATGA

mRNA sequence

ATGATAGCGTTCATTAGATTTCGGAATTTATCGTTCCAATTCCGTAAGGAAACTGAATTAAATAGACGTTTTCATTCCGGAACGAATCTGAAATCCACTTCTCCGGATTCTTCCTGCTCTGCCGTTGCGATTTTCTGGGATTTGGACAATAAACCACCGAAATCGTTACCGCCTTACGAAGCTGCTGTTAAGCTCAAGGCTGCAGCGGCTTCCTTTGGCGCCATTCGGTACATGGTGGCTTATGCGAATCGGCATGCGTTCAGCTATGTGCCGCAAGTTGTTAGAGAGAAAAGGAGAGAGAGGAAGATGCTTAATCAATTGGAGAGGAAAGGTGTGATTAAATCGATTGAGCCGTATCTGTGTCGTGTTTGTGGGAGAAATTTCTATACGAATGAGAAGTTAGTGAATCATTTTAAGCAAATTCATGAGAGTGAGCATACGAAGAGGTTGAATCAGATCGAATCTGCCAAGGGTAGTAGAAGAGTGAAGTTGCTCGCTAAGTATTCGATGAAAATACAGAAGTATAAGAATGGTGCTAGGGATGTTTTGACTCCGAAAGAGGGATATGGTCTAGCAGATGAGTTGAAGAGGGCAGGGTTTTTTGTGAAGACTGTGTCGGATAAGCCTGAAGCTGCCGATGTAGAATTGAGAAACGACATGGTTGAGGTCATGGATAGGAGAAGAGCAGAGTGTTTGGTTCTTGTATCAAATGATTCTGATTTTGTGAATGTTTTGAAGGAGGCCAAGTTGAGATGTCTTAGAACAGTTGTTGTTGGGGATCTTAATGATGGGCCATTGAAGAGAAATGCTGATACTGGGTTTTCTTGGAAGGAGATTTTAATGGGGAAGGCTAAGAAGGAGGCTGTGTCTGTTGTGGGAAAATGGAAGGATCGGGACGTTTTGAAGAGATTGGAATGGACATACAATCCTCAATTGGAGAAGGAAGTGTTTGGTTTGGATGATGATATGGGCGAGGATGAAGATGTTGACCAAGGTTCGGTTGATGAGAATATGACAAATGGTGACAGTGGTGCTTGGTGGGATCTCAGCTCTGATGCTGAAACTGAAGCTGTGTCGTCACGATCATGTAAATGA

Coding sequence (CDS)

ATGATAGCGTTCATTAGATTTCGGAATTTATCGTTCCAATTCCGTAAGGAAACTGAATTAAATAGACGTTTTCATTCCGGAACGAATCTGAAATCCACTTCTCCGGATTCTTCCTGCTCTGCCGTTGCGATTTTCTGGGATTTGGACAATAAACCACCGAAATCGTTACCGCCTTACGAAGCTGCTGTTAAGCTCAAGGCTGCAGCGGCTTCCTTTGGCGCCATTCGGTACATGGTGGCTTATGCGAATCGGCATGCGTTCAGCTATGTGCCGCAAGTTGTTAGAGAGAAAAGGAGAGAGAGGAAGATGCTTAATCAATTGGAGAGGAAAGGTGTGATTAAATCGATTGAGCCGTATCTGTGTCGTGTTTGTGGGAGAAATTTCTATACGAATGAGAAGTTAGTGAATCATTTTAAGCAAATTCATGAGAGTGAGCATACGAAGAGGTTGAATCAGATCGAATCTGCCAAGGGTAGTAGAAGAGTGAAGTTGCTCGCTAAGTATTCGATGAAAATACAGAAGTATAAGAATGGTGCTAGGGATGTTTTGACTCCGAAAGAGGGATATGGTCTAGCAGATGAGTTGAAGAGGGCAGGGTTTTTTGTGAAGACTGTGTCGGATAAGCCTGAAGCTGCCGATGTAGAATTGAGAAACGACATGGTTGAGGTCATGGATAGGAGAAGAGCAGAGTGTTTGGTTCTTGTATCAAATGATTCTGATTTTGTGAATGTTTTGAAGGAGGCCAAGTTGAGATGTCTTAGAACAGTTGTTGTTGGGGATCTTAATGATGGGCCATTGAAGAGAAATGCTGATACTGGGTTTTCTTGGAAGGAGATTTTAATGGGGAAGGCTAAGAAGGAGGCTGTGTCTGTTGTGGGAAAATGGAAGGATCGGGACGTTTTGAAGAGATTGGAATGGACATACAATCCTCAATTGGAGAAGGAAGTGTTTGGTTTGGATGATGATATGGGCGAGGATGAAGATGTTGACCAAGGTTCGGTTGATGAGAATATGACAAATGGTGACAGTGGTGCTTGGTGGGATCTCAGCTCTGATGCTGAAACTGAAGCTGTGTCGTCACGATCATGTAAATGA

Protein sequence

MIAFIRFRNLSFQFRKETELNRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYEAAVKLKAAAASFGAIRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESEHTKRLNQIESAKGSRRVKLLAKYSMKIQKYKNGARDVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSNDSDFVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDVLKRLEWTYNPQLEKEVFGLDDDMGEDEDVDQGSVDENMTNGDSGAWWDLSSDAETEAVSSRSCK

Homology

[Close]

BLAST of CmoCh16G010940 vs. ExPASy TrEMBL
Match: A0A6J1E6T9 (uncharacterized protein LOC111431136 OS=Cucurbita moschata OX=3662 GN=LOC111431136 PE=4 SV=1)

HSP 1 Score: 718.8 bits (1854), Expect = 1.2e-203
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MIAFIRFRNLSFQFRKETELNRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           MIAFIRFRNLSFQFRKETELNRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE
Sbjct: 1   MIAFIRFRNLSFQFRKETELNRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60

Query: 61  AAVKLKAAAASFGAIRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLKAAAASFGAIRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKAAAASFGAIRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHTKRLNQIESAKGSRRVKLLAKYSMKIQKYKNGAR 180
           CRVCGRNFYTNEKLVNHFKQIHESEHTKRLNQIESAKGSRRVKLLAKYSMKIQKYKNGAR
Sbjct: 121 CRVCGRNFYTNEKLVNHFKQIHESEHTKRLNQIESAKGSRRVKLLAKYSMKIQKYKNGAR 180

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSNDSD 240
           DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSNDSD
Sbjct: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSNDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVDQGSVDENMTNGDSGAWWDLSSDAETEAVSS 360
           LKRLEWTYNPQLEKEVFGLDDDMGEDEDVDQGSVDENMTNGDSGAWWDLSSDAETEAVSS
Sbjct: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVDQGSVDENMTNGDSGAWWDLSSDAETEAVSS 360

Query: 361 RSCK 365
           RSCK
Sbjct: 361 RSCK 364

[Close]

BLAST of CmoCh16G010940 vs. ExPASy TrEMBL
Match: A0A6J1HMT7 (uncharacterized protein LOC111465052 OS=Cucurbita maxima OX=3661 GN=LOC111465052 PE=4 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 8.7e-199
Identity = 355/364 (97.53%), Postives = 360/364 (98.90%), Query Frame = 0


Query: 1   MIAFIRFRNLSFQFRKETELNRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           MIAFIRFRNLS+QFRKETEL RRFHSGTNLKS SPDSSCSAVAIFWDLDNKPPKSLPPYE
Sbjct: 8   MIAFIRFRNLSYQFRKETELIRRFHSGTNLKSNSPDSSCSAVAIFWDLDNKPPKSLPPYE 67

Query: 61  AAVKLKAAAASFGAIRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLKAAAASFGA+RYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL
Sbjct: 68  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 127

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHTKRLNQIESAKGSRRVKLLAKYSMKIQKYKNGAR 180
           CRVCGRNFYTNEKLVNHFKQIHESEH KRLNQIESAKGSRRVKLLAKYSMKIQKYKN AR
Sbjct: 128 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 187

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSNDSD 240
           DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVS+DSD
Sbjct: 188 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 247

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 248 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 307

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVDQGSVDENMTNGDSGAWWDLSSDAETEAVSS 360
           LKRLEWTYNPQLEKEVFGLDDDMGEDEDV+QGSVDENMTNGDSGAWWDL+SDAETEAVSS
Sbjct: 308 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDLNSDAETEAVSS 367

Query: 361 RSCK 365
           RSCK
Sbjct: 368 RSCK 371

[Close]

BLAST of CmoCh16G010940 vs. ExPASy TrEMBL
Match: A0A5D3D7P9 (Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001350 PE=4 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 2.6e-179
Identity = 324/368 (88.04%), Postives = 344/368 (93.48%), Query Frame = 0


Query: 1   MIAFIRFRNLSFQFRKETELNRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           MI+F+RFRNLS++FR ET+L RRFHSGTN KS SPDSS S VAIFWDLDNKPPKSLPPY+
Sbjct: 1   MISFVRFRNLSYKFRNETDLVRRFHSGTNPKSNSPDSSYSTVAIFWDLDNKPPKSLPPYQ 60

Query: 61  AAVKLKAAAASFGAIRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLK AAASFGA+RYMVAYANRHAFSYVPQVVRE++RERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHTKRLNQIESAKGSRRVKLLAKYSMKIQKYKNGAR 180
           CRVCGRNFY  EKLVNHFKQIHESEH KRLNQIESA+GSRRVKL+AKYSMKIQKYKN AR
Sbjct: 121 CRVCGRNFYMYEKLVNHFKQIHESEHKKRLNQIESARGSRRVKLIAKYSMKIQKYKNAAR 180

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSNDSD 240
           DVLTP+ GYGLADELKRAGFFVKTVSDKPEAADVELRNDMVE+MDRRRAECLVLVS+DSD
Sbjct: 181 DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRRAECLVLVSDDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVDQGSVD----ENMTNGDSGAWWDLSSDAETE 360
           LKRLEWTYNPQLEKEV GLDDD+GED++V++GSVD    E M N D GAWWDLSSDAET+
Sbjct: 301 LKRLEWTYNPQLEKEVSGLDDDIGEDDNVEEGSVDGGLCEIMQNNDRGAWWDLSSDAETD 360

Query: 361 AVSSRSCK 365
            VSS S K
Sbjct: 361 TVSSPSWK 368

[Close]

BLAST of CmoCh16G010940 vs. ExPASy TrEMBL
Match: A0A1S3BKT2 (uncharacterized protein LOC103490929 OS=Cucumis melo OX=3656 GN=LOC103490929 PE=4 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 7.6e-179
Identity = 323/368 (87.77%), Postives = 344/368 (93.48%), Query Frame = 0


Query: 1   MIAFIRFRNLSFQFRKETELNRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           MI+F+RFRNLS++FR ET+L RRFHSGTN KS SPDSS S VAIFWDLDNKPPKSLPPY+
Sbjct: 1   MISFVRFRNLSYKFRNETDLVRRFHSGTNPKSNSPDSSYSTVAIFWDLDNKPPKSLPPYQ 60

Query: 61  AAVKLKAAAASFGAIRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLK AAASFGA+RYMVAYANRHAFSYVPQVVRE++RERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHTKRLNQIESAKGSRRVKLLAKYSMKIQKYKNGAR 180
           CRVCGRNFY  EKLVNHFKQIHESEH KRLNQIESA+GSRRVKL+AKYSMKIQKYKN AR
Sbjct: 121 CRVCGRNFYMYEKLVNHFKQIHESEHKKRLNQIESARGSRRVKLIAKYSMKIQKYKNAAR 180

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSNDSD 240
           DVLTP+ GYGLADELKRAGFFVKTVSDKPEAADVELRNDMVE+MDRRRAECLVLVS+DSD
Sbjct: 181 DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRRAECLVLVSDDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVDQGSVD----ENMTNGDSGAWWDLSSDAETE 360
           LKRLEWTYNPQLEKEV GLDDD+GE+++V++GSVD    E M N D GAWWDLSSDAET+
Sbjct: 301 LKRLEWTYNPQLEKEVSGLDDDIGEEDNVEEGSVDGGLCEIMQNNDRGAWWDLSSDAETD 360

Query: 361 AVSSRSCK 365
            VSS S K
Sbjct: 361 TVSSPSWK 368

[Close]

BLAST of CmoCh16G010940 vs. ExPASy TrEMBL
Match: A0A0A0L708 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G035880 PE=4 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 3.5e-176
Identity = 321/366 (87.70%), Postives = 341/366 (93.17%), Query Frame = 0


Query: 1   MIAFIRFRNLSFQFRKETELNRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           M++FIRFRNLS++FR ET L R FHSGTN KS SPDSS S VAIFWDLDNKPPKSLPPY+
Sbjct: 52  MLSFIRFRNLSYKFRNETVLIRCFHSGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQ 111

Query: 61  AAVKLKAAAASFGAIRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKL+ AAASFGA+RYMVAYANRHAFSYVPQVVRE++RERKMLNQLERKGVIKSIEPYL
Sbjct: 112 AAVKLRTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 171

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHTKRLNQIESAKGSRRVKLLAKYSMKIQKYKNGAR 180
           CRVCGRNFYTNEKLVNHFKQIHESEH KRLNQIESAKGSRRVKL+AKYSMKIQKYKN AR
Sbjct: 172 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAAR 231

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSNDSD 240
           DVL P+ GYGLADELKRAGFFVKTVSDKPEAADVELRNDMVE+MDRR+AECLVLVS+DSD
Sbjct: 232 DVL-PEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSD 291

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSW+EILMGKAKKEAVSVVGKWKDRDV
Sbjct: 292 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDV 351

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVDQGSVD----ENMTNGDSGAWWDLSSDAETE 360
           LKRLEWTYNP LEK+V GLDDD+GED+DV+ GSVD    ENM N D GAWWDLSSDAET+
Sbjct: 352 LKRLEWTYNPPLEKKVSGLDDDIGEDDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAETD 411

Query: 361 AVSSRS 363
            VSS S
Sbjct: 412 TVSSPS 416

[Close]

BLAST of CmoCh16G010940 vs. TAIR 10
Match: AT4G12240.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 422.5 bits (1085), Expect = 3.3e-118
Identity = 210/327 (64.22%), Postives = 258/327 (78.90%), Query Frame = 0


Query: 42  VAIFWDLDNKPPKSLPPYEAAVKLKAAAASFGAIRYMVAYANRHAFSYVPQVVREKRRER 101
           V ++WDLDNKPP S PPY+AAVKL+ AA+SFG ++ M+AYANRHAFSYVP  VRE+R++R
Sbjct: 40  VGVWWDLDNKPPASFPPYDAAVKLRTAASSFGTVKLMMAYANRHAFSYVPLEVREQRKDR 99

Query: 102 KMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESEHTKRLNQIESAKGSRR 161
           K+LN+LE KG++K  EPY C VC R FYTNEKL+NHFKQIHE+E+ KR+ QIES+KG RR
Sbjct: 100 KLLNKLENKGLVKPPEPYFCGVCDRRFYTNEKLINHFKQIHETENQKRMRQIESSKGHRR 159

Query: 162 VKLLAKYSMKIQKYKNGARDVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMV 221
           V+L+AKYSMKI+KYK  AR+VLTPKEGYGLADELKRAGF+VK VSDKP+AAD  L+  +V
Sbjct: 160 VRLVAKYSMKIEKYKRAARNVLTPKEGYGLADELKRAGFWVKMVSDKPDAADKALKEHLV 219

Query: 222 EVMDRRRAECLVLVSNDSDFVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILM 281
           EVMD+R  EC+VLVS+DSDF  +L EAK RCLRTVV+GD N+G LKR AD  +SWKE+ M
Sbjct: 220 EVMDKREVECVVLVSDDSDFAGILWEAKERCLRTVVIGDSNEGALKRVADVAYSWKEVTM 279

Query: 282 GKAKKEAVSVVGKWKDRDVLKRLEWTYNPQLEKEVFG----LDDDMGEDEDVDQGSVDEN 341
           GKAKKE   VVGKWKDRDVLK+LEWTY+P LEKE  G     D +   D++++ G+  E 
Sbjct: 280 GKAKKEVEKVVGKWKDRDVLKKLEWTYDPALEKERGGSCGVWDYEFDYDDEIENGTEVEP 339

Query: 342 MTNGDSGAWWDLSSDAETEAVSSRSCK 365
           +  GD   WW +  D E    SSR+C+
Sbjct: 340 VEIGDGVDWWKI--DTEDGVGSSRTCR 364

[Close]

BLAST of CmoCh16G010940 vs. TAIR 10
Match: AT5G52010.1 (C2H2-like zinc finger protein )

HSP 1 Score: 209.9 bits (533), Expect = 3.4e-54
Identity = 127/295 (43.05%), Postives = 171/295 (57.97%), Query Frame = 0


Query: 4   FIRFRNLSFQFRKETE--LNRRFHSGTNLKSTSPDS-------------SCSAVAIFWDL 63
           F  F N  FQ  K T   L  ++   + LKS S                    V + WDL
Sbjct: 23  FFTFSNSKFQNPKFTSFPLRHQWRIESCLKSASSSEIDMVRNKEGIFAPKEKKVVVLWDL 82

Query: 64  DNKPPKSLPPYEAAVKLKAAAASFGAIRYMVAYANRHAFSYVPQVVREKRRERKMLNQLE 123
           DNKPP+  PPYEAA  L+  A   G +  + AYANRHAF ++P  V E+RRER+ L+ +E
Sbjct: 83  DNKPPRG-PPYEAATALRKVAEKLGRVVEISAYANRHAFIHLPHWVVEERRERRNLDFME 142

Query: 124 RKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESEHTKRLNQIESAKGSRRVKLLAKY 183
           RKG +  I+PY+C VCGR   TN  L  HFKQ+HE E  K++N++ S KG +R K   +Y
Sbjct: 143 RKGEVTPIDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKVNRMRSLKGKKRQKFKERY 202

Query: 184 SMKIQKYKNGARDVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRR 243
               +KY   AR +LTPK GYGL  EL+RAG +VKTV DKP+AAD  ++  +   M  R 
Sbjct: 203 VSGNEKYNEAARSLLTPKVGYGLEAELRRAGVYVKTVEDKPQAADWAVKRQIQHSM-TRG 262

Query: 244 AECLVLVSNDSDFVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGK 284
            + LVLVS+D DF ++L++A+   L T+VV D+ D  L R+AD    W  +  G+
Sbjct: 263 IDWLVLVSDDKDFSDMLRKAREADLGTLVVSDM-DRALGRHADLWVPWSGVEKGE 314

The following BLAST results are available for this feature:

BLAST of CmoCh16G010940 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh16G010940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6T9	1.2e-203	100.00	uncharacterized protein LOC111431136 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1HMT7	8.7e-199	97.53	uncharacterized protein LOC111465052 OS=Cucurbita maxima OX=3661 GN=LOC111465052...	[more]
A0A5D3D7P9	2.6e-179	88.04	Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BKT2	7.6e-179	87.77	uncharacterized protein LOC103490929 OS=Cucumis melo OX=3656 GN=LOC103490929 PE=...	[more]
A0A0A0L708	3.5e-176	87.70	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G035880 P...	[more]

BLAST of CmoCh16G010940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12240.1	3.3e-118	64.22	zinc finger (C2H2 type) family protein	[more]
AT5G52010.1	3.4e-54	43.05	C2H2-like zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021139	NYN domain, limkain-b1-type	PFAM	PF01936	NYN	coord: 191..271 e-value: 1.6E-9 score: 38.4
None	No IPR available	GENE3D	3.40.50.1010		coord: 36..279 e-value: 1.9E-8 score: 36.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 321..364
None	No IPR available	PANTHER	PTHR35744:SF4	ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN	coord: 13..357
None	No IPR available	PANTHER	PTHR35744	FAMILY NOT NAMED	coord: 13..357
None	No IPR available	CDD	cd18725	PIN_LabA-like	coord: 129..260 e-value: 2.50551E-57 score: 180.99
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 121..142
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 119..147 score: 12.091923
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 118..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G010940.1	CmoCh16G010940.1	mRNA