CmoCh16G010920 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAAAGATCTGAGCGATGAACAGAAATCCTCCATGAAGGAGGCCTTTACCCTCTTCGATTCCGACGGCGATGGCCGGATCGCCCCATCGGAGCTCGGGATTCTAATGCGTTCCCTCGGCGGCAACCCCACTCAAGCCCAACTCAAAGCCATTATCGCTGAGGAGAATCTCACTGCTCCTTTTGATTTCAATCGCTTTCTTGAGATCATGTCCAAGCACATGAAGCATGAGCCCTTCGATCGCCAGCTTCGAGACGCCTTTAAGGTTCTCGATAAAGAGAACACCGGTTACGTCCTCGTCTCGGAGCTCCGACACATTTTGACGAGTATTGGTGAGAAGCTTGAGCCGTCGGAGTTTGATGAGTGGATTCGAGAAGTTGAGGTCGGACCGGATGGTAAAATTCGGTATGAGGATTTCATTGCTCGAATGGTGGCCAAATGA ATGGGCAAAGATCTGAGCGATGAACAGAAATCCTCCATGAAGGAGGCCTTTACCCTCTTCGATTCCGACGGCGATGGCCGGATCGCCCCATCGGAGCTCGGGATTCTAATGCGTTCCCTCGGCGGCAACCCCACTCAAGCCCAACTCAAAGCCATTATCGCTGAGGAGAATCTCACTGCTCCTTTTGATTTCAATCGCTTTCTTGAGATCATGTCCAAGCACATGAAGCATGAGCCCTTCGATCGCCAGCTTCGAGACGCCTTTAAGGTTCTCGATAAAGAGAACACCGGTTACGTCCTCGTCTCGGAGCTCCGACACATTTTGACGAGTATTGGTGAGAAGCTTGAGCCGTCGGAGTTTGATGAGTGGATTCGAGAAGTTGAGGTCGGACCGGATGGTAAAATTCGGTATGAGGATTTCATTGCTCGAATGGTGGCCAAATGA ATGGGCAAAGATCTGAGCGATGAACAGAAATCCTCCATGAAGGAGGCCTTTACCCTCTTCGATTCCGACGGCGATGGCCGGATCGCCCCATCGGAGCTCGGGATTCTAATGCGTTCCCTCGGCGGCAACCCCACTCAAGCCCAACTCAAAGCCATTATCGCTGAGGAGAATCTCACTGCTCCTTTTGATTTCAATCGCTTTCTTGAGATCATGTCCAAGCACATGAAGCATGAGCCCTTCGATCGCCAGCTTCGAGACGCCTTTAAGGTTCTCGATAAAGAGAACACCGGTTACGTCCTCGTCTCGGAGCTCCGACACATTTTGACGAGTATTGGTGAGAAGCTTGAGCCGTCGGAGTTTGATGAGTGGATTCGAGAAGTTGAGGTCGGACCGGATGGTAAAATTCGGTATGAGGATTTCATTGCTCGAATGGTGGCCAAATGA MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTAPFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEFDEWIREVEVGPDGKIRYEDFIARMVAK Homology
BLAST of CmoCh16G010920 vs. ExPASy Swiss-Prot
Match: Q94AZ4 (Probable calcium-binding protein CML13 OS=Arabidopsis thaliana OX=3702 GN=CML13 PE=2 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 2.6e-66 Identity = 124/148 (83.78%), Postives = 140/148 (94.59%), Query Frame = 0
BLAST of CmoCh16G010920 vs. ExPASy Swiss-Prot
Match: Q8VZ50 (Probable calcium-binding protein CML14 OS=Arabidopsis thaliana OX=3702 GN=CML14 PE=2 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 9.2e-64 Identity = 119/148 (80.41%), Postives = 138/148 (93.24%), Query Frame = 0
BLAST of CmoCh16G010920 vs. ExPASy Swiss-Prot
Match: Q84VG0 (Probable calcium-binding protein CML7 OS=Oryza sativa subsp. japonica OX=39947 GN=CML7 PE=2 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 1.5e-58 Identity = 108/146 (73.97%), Postives = 130/146 (89.04%), Query Frame = 0
BLAST of CmoCh16G010920 vs. ExPASy Swiss-Prot
Match: P84339 (Calmodulin OS=Agaricus bisporus OX=5341 PE=1 SV=2) HSP 1 Score: 146.7 bits (369), Expect = 2.0e-34 Identity = 72/149 (48.32%), Postives = 102/149 (68.46%), Query Frame = 0
BLAST of CmoCh16G010920 vs. ExPASy Swiss-Prot
Match: P13868 (Calmodulin-1 OS=Solanum tuberosum OX=4113 GN=PCM1 PE=1 SV=2) HSP 1 Score: 146.4 bits (368), Expect = 2.6e-34 Identity = 69/149 (46.31%), Postives = 103/149 (69.13%), Query Frame = 0
BLAST of CmoCh16G010920 vs. ExPASy TrEMBL
Match: A0A6J1E9N4 (probable calcium-binding protein CML13 OS=Cucurbita moschata OX=3662 GN=LOC111431138 PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 2.9e-76 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of CmoCh16G010920 vs. ExPASy TrEMBL
Match: A0A6J1HN38 (probable calcium-binding protein CML13 OS=Cucurbita maxima OX=3661 GN=LOC111465135 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75 Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of CmoCh16G010920 vs. ExPASy TrEMBL
Match: A0A6J1L2L8 (probable calcium-binding protein CML13 OS=Cucurbita maxima OX=3661 GN=LOC111498532 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 7.3e-72 Identity = 139/147 (94.56%), Postives = 145/147 (98.64%), Query Frame = 0
BLAST of CmoCh16G010920 vs. ExPASy TrEMBL
Match: A0A6J1FT67 (probable calcium-binding protein CML13 OS=Cucurbita moschata OX=3662 GN=LOC111448243 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 1.6e-71 Identity = 139/147 (94.56%), Postives = 144/147 (97.96%), Query Frame = 0
BLAST of CmoCh16G010920 vs. ExPASy TrEMBL
Match: A0A0A0L2F2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036390 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 8.1e-71 Identity = 137/147 (93.20%), Postives = 143/147 (97.28%), Query Frame = 0
BLAST of CmoCh16G010920 vs. TAIR 10
Match: AT1G12310.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 252.7 bits (644), Expect = 1.8e-67 Identity = 124/148 (83.78%), Postives = 140/148 (94.59%), Query Frame = 0
BLAST of CmoCh16G010920 vs. TAIR 10
Match: AT1G62820.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 244.2 bits (622), Expect = 6.5e-65 Identity = 119/148 (80.41%), Postives = 138/148 (93.24%), Query Frame = 0
BLAST of CmoCh16G010920 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 ) HSP 1 Score: 145.2 bits (365), Expect = 4.1e-35 Identity = 72/149 (48.32%), Postives = 101/149 (67.79%), Query Frame = 0
BLAST of CmoCh16G010920 vs. TAIR 10
Match: AT5G37780.1 (calmodulin 1 ) HSP 1 Score: 145.2 bits (365), Expect = 4.1e-35 Identity = 72/149 (48.32%), Postives = 101/149 (67.79%), Query Frame = 0
BLAST of CmoCh16G010920 vs. TAIR 10
Match: AT5G21274.1 (calmodulin 6 ) HSP 1 Score: 144.8 bits (364), Expect = 5.4e-35 Identity = 71/149 (47.65%), Postives = 101/149 (67.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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