CmoCh16G010680 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G010680
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	F-box protein At4g35733-like
Location	Cmo_Chr16: 7504086 .. 7505060 (-)
RNA-Seq Expression	CmoCh16G010680
Synteny	CmoCh16G010680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCATTGTTCCCTCGAAGGATGGTCCTGAAAAGCAGCATTGCTTATACGATCTCACTACGAACATAGTTCGCTCGGTTGACTTCAAATTTTACTTTAACAAAAGGTGTTGTGGTTCCTCTTTCGGTTGGTTGATCATGCGTGATGAGACACTCGGTATCGTTTTATTCAACCCTTTTTCTGGGGCTGTGATTTATCTTCCTCCGGTTGCTACATATGATGACATTGAGTGGATTCCAGGCCACATAATTAAAGCAATACTAACCAAAGATCCATCGTTATATCCAAACGATTACATGGTTGTAAGTATCTTTGGTACATACAAAAGATTGTATCTGATAAGAGCAAATGATAAAACTTGGACGTATTACTACCCAACACCAAACATTCCTTTTAATGATATTAATATTTGTGGTGATACTTTATATGCTACAGAATACTACTTGAATGTTTGGAAAGTTGAAGTTGAAAATAGTGAGGATGAAAGTTCATCTATTTGTATATCTGTAAAGATGGTCCACACAATAGAAATGGGGCACATGGTTACGTCGTATATTACAGAGTCTTCCAAAGGAGAGCTTTTGATTGTTTTGAGGATATTAGACTCTGGAGAAGAACAATTCGAGACGGTGGGCTTTGAAGTTTACAAACTTATCCATGAGAATGAAGATGAGATGCGAAGGGCGGTAGAGGTGAAGAGCTTAGATGGTGGTGCTATTTTTATTGGCGACTCTCAGTCCATTTGTGTTTCAACTAAAGAATTTGCTGGATGTTTACCCAACCGTATATATTTCACCGATAATCGTTACGTTAATCTTGTTGTTGGGAAATTAGATGGAACTCAAGATTTAGGTGTATTCAACTTCGAAGATGGAAGCTTTGAAGACCATTACATAGCAGATCCTGCACAAAAAAATTTACCGAGTCCCATGTGGATCATCCCAACCATATGCTCCAAAGATTTGGATGATTAA

mRNA sequence

ATGCTCATTGTTCCCTCGAAGGATGGTCCTGAAAAGCAGCATTGCTTATACGATCTCACTACGAACATAGTTCGCTCGGTTGACTTCAAATTTTACTTTAACAAAAGGTGTTGTGGTTCCTCTTTCGGTTGGTTGATCATGCGTGATGAGACACTCGGTATCGTTTTATTCAACCCTTTTTCTGGGGCTGTGATTTATCTTCCTCCGGTTGCTACATATGATGACATTGAGTGGATTCCAGGCCACATAATTAAAGCAATACTAACCAAAGATCCATCGTTATATCCAAACGATTACATGGTTGTAAGTATCTTTGGTACATACAAAAGATTGTATCTGATAAGAGCAAATGATAAAACTTGGACGTATTACTACCCAACACCAAACATTCCTTTTAATGATATTAATATTTGTGGTGATACTTTATATGCTACAGAATACTACTTGAATGTTTGGAAAGTTGAAGTTGAAAATAGTGAGGATGAAAGTTCATCTATTTGTATATCTGTAAAGATGGTCCACACAATAGAAATGGGGCACATGGTTACGTCGTATATTACAGAGTCTTCCAAAGGAGAGCTTTTGATTGTTTTGAGGATATTAGACTCTGGAGAAGAACAATTCGAGACGGTGGGCTTTGAAGTTTACAAACTTATCCATGAGAATGAAGATGAGATGCGAAGGGCGGTAGAGGTGAAGAGCTTAGATGGTGGTGCTATTTTTATTGGCGACTCTCAGTCCATTTGTGTTTCAACTAAAGAATTTGCTGGATGTTTACCCAACCGTATATATTTCACCGATAATCGTTACGTTAATCTTGTTGTTGGGAAATTAGATGGAACTCAAGATTTAGGTGTATTCAACTTCGAAGATGGAAGCTTTGAAGACCATTACATAGCAGATCCTGCACAAAAAAATTTACCGAGTCCCATGTGGATCATCCCAACCATATGCTCCAAAGATTTGGATGATTAA

Coding sequence (CDS)

ATGCTCATTGTTCCCTCGAAGGATGGTCCTGAAAAGCAGCATTGCTTATACGATCTCACTACGAACATAGTTCGCTCGGTTGACTTCAAATTTTACTTTAACAAAAGGTGTTGTGGTTCCTCTTTCGGTTGGTTGATCATGCGTGATGAGACACTCGGTATCGTTTTATTCAACCCTTTTTCTGGGGCTGTGATTTATCTTCCTCCGGTTGCTACATATGATGACATTGAGTGGATTCCAGGCCACATAATTAAAGCAATACTAACCAAAGATCCATCGTTATATCCAAACGATTACATGGTTGTAAGTATCTTTGGTACATACAAAAGATTGTATCTGATAAGAGCAAATGATAAAACTTGGACGTATTACTACCCAACACCAAACATTCCTTTTAATGATATTAATATTTGTGGTGATACTTTATATGCTACAGAATACTACTTGAATGTTTGGAAAGTTGAAGTTGAAAATAGTGAGGATGAAAGTTCATCTATTTGTATATCTGTAAAGATGGTCCACACAATAGAAATGGGGCACATGGTTACGTCGTATATTACAGAGTCTTCCAAAGGAGAGCTTTTGATTGTTTTGAGGATATTAGACTCTGGAGAAGAACAATTCGAGACGGTGGGCTTTGAAGTTTACAAACTTATCCATGAGAATGAAGATGAGATGCGAAGGGCGGTAGAGGTGAAGAGCTTAGATGGTGGTGCTATTTTTATTGGCGACTCTCAGTCCATTTGTGTTTCAACTAAAGAATTTGCTGGATGTTTACCCAACCGTATATATTTCACCGATAATCGTTACGTTAATCTTGTTGTTGGGAAATTAGATGGAACTCAAGATTTAGGTGTATTCAACTTCGAAGATGGAAGCTTTGAAGACCATTACATAGCAGATCCTGCACAAAAAAATTTACCGAGTCCCATGTGGATCATCCCAACCATATGCTCCAAAGATTTGGATGATTAA

Protein sequence

MLIVPSKDGPEKQHCLYDLTTNIVRSVDFKFYFNKRCCGSSFGWLIMRDETLGIVLFNPFSGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVSIFGTYKRLYLIRANDKTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGHMVTSYITESSKGELLIVLRILDSGEEQFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAIFIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIADPAQKNLPSPMWIIPTICSKDLDD

Homology

[Close]

BLAST of CmoCh16G010680 vs. ExPASy Swiss-Prot
Match: Q9FLP7 (Putative F-box protein At5g55150 OS=Arabidopsis thaliana OX=3702 GN=At5g55150 PE=4 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 3.3e-13
Identity = 75/293 (25.60%), Postives = 127/293 (43.34%), Query Frame = 0


Query: 39  GSSFGWLIMRDETLGIVLFNPFSGAVIYLPPVATYDDI-------------EWIPGHIIK 98
           G+   W+     TLG +L  P + +V  LPP+ +++D+             E +   I K
Sbjct: 85  GNQQAWVC--GSTLGFLLTKPVTKSVTSLPPLISFEDVQRLLQSQAIIPDSEALKNFIKK 144

Query: 99  AILTKDPSLYPNDYMVVSIFGTYKRLYLIRANDKTWTYYYPTPNIPFNDINICGDTLYAT 158
           A+     SL  ++++V+ I+ T ++L   R  DK WT      +   +DI  C    +A 
Sbjct: 145 AV--SSTSLLDDEWVVLVIYNTDRKLAFCRRGDKQWTDLESVAS-SVDDIVFCNGVFFAI 204

Query: 159 EYYLNVWKVEVENSEDESSSICISVKMVHTIEMGHMVTSYITESSKGELLIVLRILDSGE 218
           +    ++  E+  +  +++ +C +    +          Y+ ES   EL +VL+ L+  +
Sbjct: 205 DRLGEIYHCELSANNPKATPLCSTSPFRY-----DSCKKYLAESDYDELWVVLKKLELND 264

Query: 219 E-QFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAIFIG-DSQSICVSTKEFAGCLPNRI 278
           +  FET  FE+Y+   E  +      +V SL G A+F+    + I V   E      N +
Sbjct: 265 DCDFET-SFEIYEFNRETNE----WTKVMSLRGKALFLSPQGRCIAVLAGERGFFKDNSV 324

Query: 279 YFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIADPAQKNLPSPMWIIPT 317
           YF D    +  VG   G Q+L VF +E       Y   P   N     W+ PT
Sbjct: 325 YFIDGD--DPSVGG-SGPQNLSVFEWESKQIMKIY--QPRSWNC-QMFWVTPT 356

[Close]

BLAST of CmoCh16G010680 vs. ExPASy Swiss-Prot
Match: Q3EBY8 (F-box protein At2g17690 OS=Arabidopsis thaliana OX=3702 GN=SDC PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 9.9e-10
Identity = 35/71 (49.30%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 209 ETVGFEVYKLIHENEDEMRRAVEVKSLDGGAIFIGDSQSICVSTKEFAGCLPNRIYFTDN 268
           +T+GF+VYK    N++E+ + VEVKSL   AI I       VS  EF GCLPN IYFTD 
Sbjct: 332 KTIGFKVYK----NDEELLKWVEVKSLGDKAIVIATDACFSVSAHEFYGCLPNSIYFTDK 391

Query: 269 RYVNLVVGKLD 280
           +   + V KLD
Sbjct: 392 KEEEVKVFKLD 398

[Close]

BLAST of CmoCh16G010680 vs. ExPASy Swiss-Prot
Match: Q9SHX9 (Putative F-box protein At1g65770 OS=Arabidopsis thaliana OX=3702 GN=At1g65770 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-08
Identity = 40/95 (42.11%), Postives = 49/95 (51.58%), Query Frame = 0


Query: 185 YITESSKGELLIVLRILDSGEEQFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAIFIGD 244
           YI E   GE     +  D+G E  +TVGF+VYK     +DE  + +EVKSL   A  I  
Sbjct: 245 YIVERLVGESTWKRKADDTGYEYAKTVGFKVYKF----DDEQGKMMEVKSLGDKAFVIAT 304

Query: 245 SQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLD 280
                V   EF GCL N IYFTD+  +   V KLD
Sbjct: 305 DTCFSVLAHEFYGCLENAIYFTDDTMIK--VFKLD 333

[Close]

BLAST of CmoCh16G010680 vs. ExPASy Swiss-Prot
Match: B3H6C3 (F-box protein At4g35733 OS=Arabidopsis thaliana OX=3702 GN=At4g35733 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.7e-06
Identity = 59/204 (28.92%), Postives = 85/204 (41.67%), Query Frame = 0


Query: 102 VSIFGTYKRLYLIRAN--DKTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENS 161
           V I   YK+++L  +N  D  W          F+DI      +YA +    VW + +  S
Sbjct: 160 VFIVDNYKKIWLCNSNESDSHWVRIMDEEVKLFSDIVFHKGYMYALDLTGAVWWISL--S 219

Query: 162 EDESSSICISVKMVHTIEMGHMVTSYITESSKGELLIVLRILDSGEEQFE--------TV 221
           E        S   +   ++         E   G+L IV R       +F         TV
Sbjct: 220 EFGIFQFGPSSTPMDYCDIDECKDKRFVEYC-GDLCIVHRF----SRKFRIKRVDIDMTV 279

Query: 222 GFEVYKLIHENEDEMRRAVEVKSLDGGAIFIGDSQSICVSTKEFAGCLPNRIYFTDNRYV 281
           GF+VYK+    ++E+   VEVKSL   A  +       V  +E+ GCL N IYFT+    
Sbjct: 280 GFKVYKM----DEELVEYVEVKSLGDKAFVMATDSCFSVLAREYYGCLENSIYFTEQN-- 339

Query: 282 NLVVGKLDGTQDLGVFNFEDGSFE 296
           N+ V KL    D  + N  D SF+
Sbjct: 340 NVKVFKLG---DGSITNMVDSSFQ 347

[Close]

BLAST of CmoCh16G010680 vs. ExPASy Swiss-Prot
Match: P0C2F5 (Uncharacterized protein At1g65760 OS=Arabidopsis thaliana OX=3702 GN=At1g65760 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.9e-05
Identity = 29/87 (33.33%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 192 GELLIVLRILDSGEEQ--------FETVGFEVYKLIHENEDEMRRAVEVKSLDGGAIFIG 251
           GEL IV R+  +  ++          TVGF+ YK+    ++E+ + +E+K+L   A  +G
Sbjct: 246 GELYIVERLPKNTRKRKAGDFFHNSRTVGFKAYKM----DEELAKWIEIKTLGDNAFLMG 305

Query: 252 DSQSICVSTKEFAGCLPNRIYFTDNRY 271
                 V   E  GCLPN IY+T+N +
Sbjct: 306 TDTCFSVLAHEVYGCLPNSIYYTENTW 328

[Close]

BLAST of CmoCh16G010680 vs. ExPASy TrEMBL
Match: A0A6J1EBA6 (F-box protein At4g35733-like OS=Cucurbita moschata OX=3662 GN=LOC111431009 PE=4 SV=1)

HSP 1 Score: 679.9 bits (1753), Expect = 5.3e-192
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MLIVPSKDGPEKQHCLYDLTTNIVRSVDFKFYFNKRCCGSSFGWLIMRDETLGIVLFNPF 60
           MLIVPSKDGPEKQHCLYDLTTNIVRSVDFKFYFNKRCCGSSFGWLIMRDETLGIVLFNPF
Sbjct: 1   MLIVPSKDGPEKQHCLYDLTTNIVRSVDFKFYFNKRCCGSSFGWLIMRDETLGIVLFNPF 60

Query: 61  SGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVSIFGTYKRLYLIRANDKT 120
           SGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVSIFGTYKRLYLIRANDKT
Sbjct: 61  SGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVSIFGTYKRLYLIRANDKT 120

Query: 121 WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH 180
           WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH
Sbjct: 121 WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH 180

Query: 181 MVTSYITESSKGELLIVLRILDSGEEQFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAI 240
           MVTSYITESSKGELLIVLRILDSGEEQFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAI
Sbjct: 181 MVTSYITESSKGELLIVLRILDSGEEQFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAI 240

Query: 241 FIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIA 300
           FIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIA
Sbjct: 241 FIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIA 300

Query: 301 DPAQKNLPSPMWIIPTICSKDLDD 325
           DPAQKNLPSPMWIIPTICSKDLDD
Sbjct: 301 DPAQKNLPSPMWIIPTICSKDLDD 324

[Close]

BLAST of CmoCh16G010680 vs. ExPASy TrEMBL
Match: A0A6J1E923 (probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 PE=4 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 9.5e-181
Identity = 306/323 (94.74%), Postives = 312/323 (96.59%), Query Frame = 0


Query: 1   MLIVPSKDGPEKQHCLYDLTTNIVRSVDFKFYFNKRCCGSSFGWLIMRDETLGIVLFNPF 60
           MLIVPSKDG EKQHCLYDLT N+VR VDFKF FNKRCCGSSFGWLIMRDETLGIVLFNPF
Sbjct: 63  MLIVPSKDGLEKQHCLYDLTRNVVRPVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPF 122

Query: 61  SGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVSIFGTYKRLYLIRANDKT 120
           SG VIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVV+IFGTYKRL LIRANDKT
Sbjct: 123 SGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVAIFGTYKRLCLIRANDKT 182

Query: 121 WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH 180
           WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH
Sbjct: 183 WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH 242

Query: 181 MVTSYITESSKGELLIVLRILDSGEEQFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAI 240
           +VTSYITESSKGELL+VLRILDSGEEQFETV FEVYKLIHENEDEMRRAVEVKSLDG AI
Sbjct: 243 LVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEVKSLDGDAI 302

Query: 241 FIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIA 300
           FIGDSQSICVSTKEF GCLPNRIYFTDNRYVNLVVGKLDGTQDLG FNFE+GSFED YIA
Sbjct: 303 FIGDSQSICVSTKEFPGCLPNRIYFTDNRYVNLVVGKLDGTQDLGTFNFENGSFEDQYIA 362

Query: 301 DPAQKNLPSPMWIIPTICSKDLD 324
           DPAQKNLPSP+WIIPTICSKDLD
Sbjct: 363 DPAQKNLPSPIWIIPTICSKDLD 385

[Close]

BLAST of CmoCh16G010680 vs. ExPASy TrEMBL
Match: A0A6J1E5P5 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 PE=4 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.3e-174
Identity = 299/324 (92.28%), Postives = 309/324 (95.37%), Query Frame = 0


Query: 1   MLIVPSKDGPEKQHCLYDLTTNIVRSVDFKFYFNKRCCGSSFGWLIMRDETLGIVLFNPF 60
           MLIVPSKDG EKQHCLYDLTTNIVRSVDFKF FNKRCCGSSFGWLIMRDETLGIVLFNPF
Sbjct: 63  MLIVPSKDGLEKQHCLYDLTTNIVRSVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPF 122

Query: 61  SGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVSIFGTYKRLYLIRANDKT 120
           SGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVV IFGTYKRL LIRANDKT
Sbjct: 123 SGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRANDKT 182

Query: 121 WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH 180
           WTYYYPTPNIPFNDINIC DT+YATE  L+VWKVEV+NSEDESSSI ISVKMVHT  + +
Sbjct: 183 WTYYYPTPNIPFNDINICRDTIYATENDLDVWKVEVQNSEDESSSISISVKMVHTKRIRY 242

Query: 181 MVTSYITESSKGELLIVLRILDSGEEQFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAI 240
           + T+YITESSKGELL+VLRI +SGEEQFETV FEVYKLIHENEDE+RRAVEVKSLDG AI
Sbjct: 243 IGTAYITESSKGELLVVLRIFNSGEEQFETVDFEVYKLIHENEDELRRAVEVKSLDGDAI 302

Query: 241 FIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIA 300
           FIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIA
Sbjct: 303 FIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIA 362

Query: 301 DPAQKNLPSPMWIIPTICSKDLDD 325
           DPAQKNLPSPMWIIPTICSKDLDD
Sbjct: 363 DPAQKNLPSPMWIIPTICSKDLDD 386

[Close]

BLAST of CmoCh16G010680 vs. ExPASy TrEMBL
Match: A0A6J1E5W8 (uncharacterized protein LOC111431008 OS=Cucurbita moschata OX=3662 GN=LOC111431008 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.3e-137
Identity = 242/255 (94.90%), Postives = 245/255 (96.08%), Query Frame = 0


Query: 1   MLIVPSKDGPEKQHCLYDLTTNIVRSVDFKFYFNKRCCGSSFGWLIMRDETLGIVLFNPF 60
           MLIVP +DG EKQHCLYDLT NIVRSVDFKF FNKRC GSSFGWLIMRDETLGIVLFNPF
Sbjct: 63  MLIVPLEDGFEKQHCLYDLTRNIVRSVDFKFCFNKRCRGSSFGWLIMRDETLGIVLFNPF 122

Query: 61  SGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVSIFGTYKRLYLIRANDKT 120
           SG VIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVV IFGTYKRL LIRANDKT
Sbjct: 123 SGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRANDKT 182

Query: 121 WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH 180
           WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH
Sbjct: 183 WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH 242

Query: 181 MVTSYITESSKGELLIVLRILDSGEEQFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAI 240
           MVTSYITESSKGELL+VLRILDSGEEQFETV FEVYKLIHENEDEMRRAVE+KSLDG AI
Sbjct: 243 MVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEIKSLDGDAI 302

Query: 241 FIGDSQSICVSTKEF 256
           FIGDSQSICVSTKEF
Sbjct: 303 FIGDSQSICVSTKEF 317

[Close]

BLAST of CmoCh16G010680 vs. ExPASy TrEMBL
Match: A0A6J1E6C7 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.9e-117
Identity = 213/324 (65.74%), Postives = 245/324 (75.62%), Query Frame = 0


Query: 1   MLIVPSKDGPEKQHCLYDLTTNIVRSVDFKFYFNKRCCGSSFGWLIMRDETLGIVLFNPF 60
           MLIVPSK+G EKQHCLYD   N  R VDFKF FNKRCCGSSFGWLIM +ETL + LFNPF
Sbjct: 63  MLIVPSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPF 122

Query: 61  SGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVSIFGTYKRLYLIRANDKT 120
           SG VI LP +   D+ ++ P  I+KAILTKDPSLYPNDYMVV+I+ +Y RL L+RANDK+
Sbjct: 123 SGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKS 182

Query: 121 WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH 180
           WTY YP PNIPF DIN+  DTLYATE  + VWKVEV+N +DESSSI IS+KMVH      
Sbjct: 183 WTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTND 242

Query: 181 MVTSYITESSKGELLIVLRILDSGEEQFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAI 240
            V SYITESSKGELL+VLR +   + Q ET  F+VYKLI E E++M RAV++KSLDG A+
Sbjct: 243 FVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAM 302

Query: 241 FIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIA 300
           FIGDSQSICVSTK F  CLPN IYF  N Y N +       QD G+FN ED  F +HYI 
Sbjct: 303 FIGDSQSICVSTKYFPKCLPNCIYFI-NGYYNYIPNL---EQDSGIFNLEDKRFANHYIR 362

Query: 301 DPAQKNLPSPMWIIPTICSKDLDD 325
           DPA KNLP P+WIIPTICSKD +D
Sbjct: 363 DPAHKNLPQPIWIIPTICSKDFED 382

[Close]

BLAST of CmoCh16G010680 vs. TAIR 10
Match: AT5G55150.1 (Protein of unknown function (DUF295) )

HSP 1 Score: 77.4 bits (189), Expect = 2.3e-14
Identity = 75/293 (25.60%), Postives = 127/293 (43.34%), Query Frame = 0


Query: 39  GSSFGWLIMRDETLGIVLFNPFSGAVIYLPPVATYDDI-------------EWIPGHIIK 98
           G+   W+     TLG +L  P + +V  LPP+ +++D+             E +   I K
Sbjct: 85  GNQQAWVC--GSTLGFLLTKPVTKSVTSLPPLISFEDVQRLLQSQAIIPDSEALKNFIKK 144

Query: 99  AILTKDPSLYPNDYMVVSIFGTYKRLYLIRANDKTWTYYYPTPNIPFNDINICGDTLYAT 158
           A+     SL  ++++V+ I+ T ++L   R  DK WT      +   +DI  C    +A 
Sbjct: 145 AV--SSTSLLDDEWVVLVIYNTDRKLAFCRRGDKQWTDLESVAS-SVDDIVFCNGVFFAI 204

Query: 159 EYYLNVWKVEVENSEDESSSICISVKMVHTIEMGHMVTSYITESSKGELLIVLRILDSGE 218
           +    ++  E+  +  +++ +C +    +          Y+ ES   EL +VL+ L+  +
Sbjct: 205 DRLGEIYHCELSANNPKATPLCSTSPFRY-----DSCKKYLAESDYDELWVVLKKLELND 264

Query: 219 E-QFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAIFIG-DSQSICVSTKEFAGCLPNRI 278
           +  FET  FE+Y+   E  +      +V SL G A+F+    + I V   E      N +
Sbjct: 265 DCDFET-SFEIYEFNRETNE----WTKVMSLRGKALFLSPQGRCIAVLAGERGFFKDNSV 324

Query: 279 YFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIADPAQKNLPSPMWIIPT 317
           YF D    +  VG   G Q+L VF +E       Y   P   N     W+ PT
Sbjct: 325 YFIDGD--DPSVGG-SGPQNLSVFEWESKQIMKIY--QPRSWNC-QMFWVTPT 356

[Close]

BLAST of CmoCh16G010680 vs. TAIR 10
Match: AT2G17690.1 (F-box family protein with a domain of unknown function (DUF295) )

HSP 1 Score: 65.9 bits (159), Expect = 7.0e-11
Identity = 35/71 (49.30%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 209 ETVGFEVYKLIHENEDEMRRAVEVKSLDGGAIFIGDSQSICVSTKEFAGCLPNRIYFTDN 268
           +T+GF+VYK    N++E+ + VEVKSL   AI I       VS  EF GCLPN IYFTD 
Sbjct: 332 KTIGFKVYK----NDEELLKWVEVKSLGDKAIVIATDACFSVSAHEFYGCLPNSIYFTDK 391

Query: 269 RYVNLVVGKLD 280
           +   + V KLD
Sbjct: 392 KEEEVKVFKLD 398

[Close]

BLAST of CmoCh16G010680 vs. TAIR 10
Match: AT1G65770.1 (ascorbic acid mannose pathway regulator 1 )

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-09
Identity = 40/95 (42.11%), Postives = 49/95 (51.58%), Query Frame = 0


Query: 185 YITESSKGELLIVLRILDSGEEQFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAIFIGD 244
           YI E   GE     +  D+G E  +TVGF+VYK     +DE  + +EVKSL   A  I  
Sbjct: 245 YIVERLVGESTWKRKADDTGYEYAKTVGFKVYKF----DDEQGKMMEVKSLGDKAFVIAT 304

Query: 245 SQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLD 280
                V   EF GCL N IYFTD+  +   V KLD
Sbjct: 305 DTCFSVLAHEFYGCLENAIYFTDDTMIK--VFKLD 333

[Close]

BLAST of CmoCh16G010680 vs. TAIR 10
Match: AT4G35733.1 (F-box family protein with a domain of unknown function (DUF295) )

HSP 1 Score: 52.8 bits (125), Expect = 6.2e-07
Identity = 59/204 (28.92%), Postives = 85/204 (41.67%), Query Frame = 0


Query: 102 VSIFGTYKRLYLIRAN--DKTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENS 161
           V I   YK+++L  +N  D  W          F+DI      +YA +    VW + +  S
Sbjct: 160 VFIVDNYKKIWLCNSNESDSHWVRIMDEEVKLFSDIVFHKGYMYALDLTGAVWWISL--S 219

Query: 162 EDESSSICISVKMVHTIEMGHMVTSYITESSKGELLIVLRILDSGEEQFE--------TV 221
           E        S   +   ++         E   G+L IV R       +F         TV
Sbjct: 220 EFGIFQFGPSSTPMDYCDIDECKDKRFVEYC-GDLCIVHRF----SRKFRIKRVDIDMTV 279

Query: 222 GFEVYKLIHENEDEMRRAVEVKSLDGGAIFIGDSQSICVSTKEFAGCLPNRIYFTDNRYV 281
           GF+VYK+    ++E+   VEVKSL   A  +       V  +E+ GCL N IYFT+    
Sbjct: 280 GFKVYKM----DEELVEYVEVKSLGDKAFVMATDSCFSVLAREYYGCLENSIYFTEQN-- 339

Query: 282 NLVVGKLDGTQDLGVFNFEDGSFE 296
           N+ V KL    D  + N  D SF+
Sbjct: 340 NVKVFKLG---DGSITNMVDSSFQ 347

[Close]

BLAST of CmoCh16G010680 vs. TAIR 10
Match: AT1G65760.1 (Protein of unknown function (DUF295) )

HSP 1 Score: 51.6 bits (122), Expect = 1.4e-06
Identity = 29/87 (33.33%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 192 GELLIVLRILDSGEEQ--------FETVGFEVYKLIHENEDEMRRAVEVKSLDGGAIFIG 251
           GEL IV R+  +  ++          TVGF+ YK+    ++E+ + +E+K+L   A  +G
Sbjct: 246 GELYIVERLPKNTRKRKAGDFFHNSRTVGFKAYKM----DEELAKWIEIKTLGDNAFLMG 305

Query: 252 DSQSICVSTKEFAGCLPNRIYFTDNRY 271
                 V   E  GCLPN IY+T+N +
Sbjct: 306 TDTCFSVLAHEVYGCLPNSIYYTENTW 328

The following BLAST results are available for this feature:

BLAST of CmoCh16G010680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLP7	3.3e-13	25.60	Putative F-box protein At5g55150 OS=Arabidopsis thaliana OX=3702 GN=At5g55150 PE...	[more]
Q3EBY8	9.9e-10	49.30	F-box protein At2g17690 OS=Arabidopsis thaliana OX=3702 GN=SDC PE=2 SV=1	[more]
Q9SHX9	1.4e-08	42.11	Putative F-box protein At1g65770 OS=Arabidopsis thaliana OX=3702 GN=At1g65770 PE...	[more]
B3H6C3	8.7e-06	28.92	F-box protein At4g35733 OS=Arabidopsis thaliana OX=3702 GN=At4g35733 PE=2 SV=1	[more]
P0C2F5	1.9e-05	33.33	Uncharacterized protein At1g65760 OS=Arabidopsis thaliana OX=3702 GN=At1g65760 P...	[more]

BLAST of CmoCh16G010680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBA6	5.3e-192	100.00	F-box protein At4g35733-like OS=Cucurbita moschata OX=3662 GN=LOC111431009 PE=4 ...	[more]
A0A6J1E923	9.5e-181	94.74	probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 P...	[more]
A0A6J1E5P5	1.3e-174	92.28	probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 P...	[more]
A0A6J1E5W8	1.3e-137	94.90	uncharacterized protein LOC111431008 OS=Cucurbita moschata OX=3662 GN=LOC1114310...	[more]
A0A6J1E6C7	1.9e-117	65.74	probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 P...	[more]

BLAST of CmoCh16G010680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55150.1	2.3e-14	25.60	Protein of unknown function (DUF295)	[more]
AT2G17690.1	7.0e-11	49.30	F-box family protein with a domain of unknown function (DUF295)	[more]
AT1G65770.1	1.0e-09	42.11	ascorbic acid mannose pathway regulator 1	[more]
AT4G35733.1	6.2e-07	28.92	F-box family protein with a domain of unknown function (DUF295)	[more]
AT1G65760.1	1.4e-06	33.33	Protein of unknown function (DUF295)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005174	Domain unknown function DUF295	PFAM	PF03478	DUF295	coord: 230..288 e-value: 9.6E-15 score: 54.0
None	No IPR available	PANTHER	PTHR44259:SF18	UBIQUITIN-PROTEIN LIGASE	coord: 1..315
None	No IPR available	PANTHER	PTHR44259	OS07G0183000 PROTEIN-RELATED	coord: 1..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G010680.1	CmoCh16G010680.1	mRNA