CmoCh16G009840 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G009840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	zinc finger CCCH domain-containing protein 18-like
Location	Cmo_Chr16: 6754909 .. 6758182 (-)
RNA-Seq Expression	CmoCh16G009840
Synteny	CmoCh16G009840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGAGCAGCTTCAAGTTTTCCAAATTCAAATTACTCAATTCGAAAACTATGTAAGTGTCTTTTTATTTTCATCTTTTCATCAATTTAATTACGAATTCGTTTCTTTTTCTGGGTTCTGTTCTTCTCATCAACTGTTCTTCATCACAGAGATTCAAAAAGAAAATTGGAGTTTGGTCTTTTTTTCTCTGTATAAATCTCCCAGATTTGGTACTTTTTGCACTTTTTTTTGAAGATTTTTGTAGTTTTATCCGATTGTTATGATGTTTTTTCAAATGGGTTTTCTAAAGTTTGGTTCTTTTTTTGGTTTTTTTGAAAAATTTGTAAAGAATTCTATGTTTTTTGAAGATTTTTGTAGTTTAATCCAATTGTTATGATGTTTTTTCAAATGGGTTTTCGAAAGTTTGTACCTTTTTTTGTTTCTTTGAAATATTTCTAAAGAATTCTATGTTTTTTTTTTTAAGATTCTTGTAGTTTAATCCGATTCTTATGATGTTTTTTCAAATGGGTTTTGGAAAGTTTGTATCTTTTTTGGTTTTTTGAAAAATTTCTTATCTTTTTTTGTTTTTTTGAAAAATTTCTAAAGAATTCTATGAAGTTGAGACAAAACACCGAAGAACAAGCGATTTTTTTTTTTTTGTGTGAAGAAATTAGTGTTGTTTCTTTGTTTAGAACAAATTATGGAATGTGATCATGATGTTGCCATCTTGGGTTCGATTCGTTTCTCTGGCACTCTTTCCTTTGTAATTCCTTGTTTTTTTTTTTTGTTATGTTTCATTGTAGTGTTGAATCCATATGGAGTTGTCGGAGTACAGAAAAATTGTATTCCATCGAATCAGTAAAATAGATCCAGAGAATGTTGAGAACATCATTTGTTTTTTGCTTCTTCATGATCATTATGATCAAGAAATGGCTCGCTTAGCACTAGCCCCTGACCATGATATCCAACAAGTGGTTCATCTAGTCAAGACTCAGCTGCATCTATTAGCTTTAAGATCGATGCCCGCCCCGGTATCGTCCCCGCCCCCATCCCCGTCCTCGGGAGCTTTTGTTCCTTTTGCCATGAGAGACAGTCGCACATCACTATACCCTGATTCTATGTATGAACTACAAAAGCCAGCTCACTTCTTTTGTTTAGACGATCATATCGAACCGCCGAACGGTCTTTCGAGCTATGATTGTAGCTATGTTGAGAATGCTGCAATGGTTAACAAATTTAGTTCGAGGACTGCTCGACATCACTCGACCGTGGTCGAGTATCAGCCGAGGATATGTCACTATTACAGCAAAGGAAATTGCAAGCATGGTAATAGTTGTAGGTATCTCCATAGCAACCAAATGCCTGGGAGCTTTTCTCAGATGTATAATGTCAATGATGATCATGTTTTTCGGCCCGGTTCGCTCGAGCGGTTGGAGTTTGAAATCGTTGAACTTCTTAGATCGAGACGAGGCAGTCCTATTTCAATTGCTTCACTGCCAATGATTTACTATGAAAAGTATGGTAAGGTTCTTCAAGCAGAAGGATACTTGACTGAGAGTCAGAGGCATGGTAAATCGGGTTTTAGCTTAACGAAACTCCTCACTCGTTTGAAAAGCAGCATTCAGGTGATCGACAGGTCGGTTTCGGTTTCGGTTTCGGTTTCAACTTGATTTTAGTAGTGGCGGGTTTGTATATGCTTATCTTTGGTTTGTAATTTCATGTCATTCAGGCCTCATGGGCAACATTCTGTCATTTTAGCAGAAGACGCTTTGAAATTCATCGACCATCGGAAGGACAAGAACGACACGAGTCCGAACGTTAGCAGCGCACGACAGATATATATGACATTTCCAGCTGATAGCAGCTTCACTGAAGATGACGTTTCTGATTACTTCAGGCAAAATGCTAAATGCTTGTGTTTATGTCTCTGCCTTTTGGCTTATTACTGTCTCAAATTTGCACTTAACCTTGTTTGTGTCAATGTAGTATCCACTATGGACTAGTTGAAGATGTAAGAATCCCTTGTCAACAAAGAAGGATGTTCGGGTTCGTGACGTTTCACAGCGTCGAGACAGTGAAACTAATCTTGTCCGAGGACAGCGAGCATTTAATTTGCGGGGCTCGAGTTCTCGTGAAACCTTATAGGGAAAAGTCCAAGCTGTTGGAAAGGTTTTACTTACTACCTTCGAACCCGAGCACCTATGCCTATTTCATCCGATTTTTAATACATGGTTTGATTTGATTCAGGAAGAACCAAGATAGGATTGAACAACAGCAACAGCAAGCTTATTTTTCTTCACACTATAACAGCCTCGAACCCGAGCAGCTTCACTCGAGTAAGTACGAGAGATTCGATTTGTCGCTTGTCATGTTCATTCTTATCATATCGTTTGTAACACAATCATTCTAGATTATGATTCTGCCTCCACAATGCTGAGGCTAAGAATCGAAGAACAACAACGACAACAAGAACAACACGCACTCGAAGTCGAACGGAGCTTTACGGAGATGACGTTAATGCCGAAATCTGCTACGAATTGTTCGTACTTTAGCTATCAGATGAAAGAACTAAGACTTCCAGTTCCAGAAGGTTAATCACAAGCTTTCTCGTCTCTCAATTCTTCATGTTTATAATGATTCTTACACAGAATTTCACATTCCCAAGAACAGAGAGTTTTGATCGTATGATGAATATTATGAAAAGTTTCTCCGGCCCGGGATCTGGCTCTAGTTCGGGGTGTAGCTCGATAGTCGATGAACAAAAACCACCCCGAAACACGGCGGCTTGGAATCACCCCGAGCTGAACCTCGACGACAGGTAACGGCCGAAACCGAGATGAGGTTGATGGTGAAGAAATGGATGATGATGATGTTAATTGGGATTGTTTGTTTGTTGGCAGCGAAGGATACAATCTACCAGACAGCCCATTTGAGTCTGGAACAGGAAACAACAACACATAGGAACATCAGTAAGTGACAGTGACACAAACATAGGATTGCCAAATCAGCTCATAATAATAAAATGTAATGCACTAATTTTAGTACGGAGATTCTAAGGTTTTAATTTTTTAAAAATAATTTTAGTTATAGAAGGAGAGAGGAGAGAAATAGGAACATAGAATGTTGTGGTTTTTAAGGATTCAAGGAACCACAGAACATCAATCTTCTCAAAGATTGTGAAATGTCGTTGGAATCTTCATGCAATGAATAATAAAACTCTAGATTGATTTTGTTTATGGAAGATTATTGTAACATTATTTGATTGTGTTATGACATTAAGCTTTTATTTGATCCAC

mRNA sequence

GCTGAGCAGCTTCAAGTTTTCCAAATTCAAATTACTCAATTCGAAAACTATTGTTGAATCCATATGGAGTTGTCGGAGTACAGAAAAATTGTATTCCATCGAATCAGTAAAATAGATCCAGAGAATGTTGAGAACATCATTTGTTTTTTGCTTCTTCATGATCATTATGATCAAGAAATGGCTCGCTTAGCACTAGCCCCTGACCATGATATCCAACAAGTGGTTCATCTAGTCAAGACTCAGCTGCATCTATTAGCTTTAAGATCGATGCCCGCCCCGGTATCGTCCCCGCCCCCATCCCCGTCCTCGGGAGCTTTTGTTCCTTTTGCCATGAGAGACAGTCGCACATCACTATACCCTGATTCTATGTATGAACTACAAAAGCCAGCTCACTTCTTTTGTTTAGACGATCATATCGAACCGCCGAACGGTCTTTCGAGCTATGATTGTAGCTATGTTGAGAATGCTGCAATGGTTAACAAATTTAGTTCGAGGACTGCTCGACATCACTCGACCGTGGTCGAGTATCAGCCGAGGATATGTCACTATTACAGCAAAGGAAATTGCAAGCATGGTAATAGTTGTAGGTATCTCCATAGCAACCAAATGCCTGGGAGCTTTTCTCAGATGTATAATGTCAATGATGATCATGTTTTTCGGCCCGGTTCGCTCGAGCGGTTGGAGTTTGAAATCGTTGAACTTCTTAGATCGAGACGAGGCAGTCCTATTTCAATTGCTTCACTGCCAATGATTTACTATGAAAAGTATGGTAAGGTTCTTCAAGCAGAAGGATACTTGACTGAGAGTCAGAGGCATGGTAAATCGGGTTTTAGCTTAACGAAACTCCTCACTCGTTTGAAAAGCAGCATTCAGGTGATCGACAGGCCTCATGGGCAACATTCTGTCATTTTAGCAGAAGACGCTTTGAAATTCATCGACCATCGGAAGGACAAGAACGACACGAGTCCGAACGTTAGCAGCGCACGACAGATATATATGACATTTCCAGCTGATAGCAGCTTCACTGAAGATGACGTTTCTGATTACTTCAGTATCCACTATGGACTAGTTGAAGATGTAAGAATCCCTTGTCAACAAAGAAGGATGTTCGGGTTCGTGACGTTTCACAGCGTCGAGACAGTGAAACTAATCTTGTCCGAGGACAGCGAGCATTTAATTTGCGGGGCTCGAGTTCTCGTGAAACCTTATAGGGAAAAGTCCAAGCTGTTGGAAAGGAAGAACCAAGATAGGATTGAACAACAGCAACAGCAAGCTTATTTTTCTTCACACTATAACAGCCTCGAACCCGAGCAGCTTCACTCGAATTATGATTCTGCCTCCACAATGCTGAGGCTAAGAATCGAAGAACAACAACGACAACAAGAACAACACGCACTCGAAGTCGAACGGAGCTTTACGGAGATGACGTTAATGCCGAAATCTGCTACGAATTGTTCGTACTTTAGCTATCAGATGAAAGAACTAAGACTTCCAGTTCCAGAAGAGAGTTTTGATCGTATGATGAATATTATGAAAAGTTTCTCCGGCCCGGGATCTGGCTCTAGTTCGGGGTGTAGCTCGATAGTCGATGAACAAAAACCACCCCGAAACACGGCGGCTTGGAATCACCCCGAGCTGAACCTCGACGACAGCGAAGGATACAATCTACCAGACAGCCCATTTGAGTCTGGAACAGGAAACAACAACACATAGGAACATCAGTAAGTGACAGTGACACAAACATAGGATTGCCAAATCAGCTCATAATAATAAAATGTAATGCACTAATTTTAGTACGGAGATTCTAAGGTTTTAATTTTTTAAAAATAATTTTAGTTATAGAAGGAGAGAGGAGAGAAATAGGAACATAGAATGTTGTGGTTTTTAAGGATTCAAGGAACCACAGAACATCAATCTTCTCAAAGATTGTGAAATGTCGTTGGAATCTTCATGCAATGAATAATAAAACTCTAGATTGATTTTGTTTATGGAAGATTATTGTAACATTATTTGATTGTGTTATGACATTAAGCTTTTATTTGATCCAC

Coding sequence (CDS)

ATGGAGTTGTCGGAGTACAGAAAAATTGTATTCCATCGAATCAGTAAAATAGATCCAGAGAATGTTGAGAACATCATTTGTTTTTTGCTTCTTCATGATCATTATGATCAAGAAATGGCTCGCTTAGCACTAGCCCCTGACCATGATATCCAACAAGTGGTTCATCTAGTCAAGACTCAGCTGCATCTATTAGCTTTAAGATCGATGCCCGCCCCGGTATCGTCCCCGCCCCCATCCCCGTCCTCGGGAGCTTTTGTTCCTTTTGCCATGAGAGACAGTCGCACATCACTATACCCTGATTCTATGTATGAACTACAAAAGCCAGCTCACTTCTTTTGTTTAGACGATCATATCGAACCGCCGAACGGTCTTTCGAGCTATGATTGTAGCTATGTTGAGAATGCTGCAATGGTTAACAAATTTAGTTCGAGGACTGCTCGACATCACTCGACCGTGGTCGAGTATCAGCCGAGGATATGTCACTATTACAGCAAAGGAAATTGCAAGCATGGTAATAGTTGTAGGTATCTCCATAGCAACCAAATGCCTGGGAGCTTTTCTCAGATGTATAATGTCAATGATGATCATGTTTTTCGGCCCGGTTCGCTCGAGCGGTTGGAGTTTGAAATCGTTGAACTTCTTAGATCGAGACGAGGCAGTCCTATTTCAATTGCTTCACTGCCAATGATTTACTATGAAAAGTATGGTAAGGTTCTTCAAGCAGAAGGATACTTGACTGAGAGTCAGAGGCATGGTAAATCGGGTTTTAGCTTAACGAAACTCCTCACTCGTTTGAAAAGCAGCATTCAGGTGATCGACAGGCCTCATGGGCAACATTCTGTCATTTTAGCAGAAGACGCTTTGAAATTCATCGACCATCGGAAGGACAAGAACGACACGAGTCCGAACGTTAGCAGCGCACGACAGATATATATGACATTTCCAGCTGATAGCAGCTTCACTGAAGATGACGTTTCTGATTACTTCAGTATCCACTATGGACTAGTTGAAGATGTAAGAATCCCTTGTCAACAAAGAAGGATGTTCGGGTTCGTGACGTTTCACAGCGTCGAGACAGTGAAACTAATCTTGTCCGAGGACAGCGAGCATTTAATTTGCGGGGCTCGAGTTCTCGTGAAACCTTATAGGGAAAAGTCCAAGCTGTTGGAAAGGAAGAACCAAGATAGGATTGAACAACAGCAACAGCAAGCTTATTTTTCTTCACACTATAACAGCCTCGAACCCGAGCAGCTTCACTCGAATTATGATTCTGCCTCCACAATGCTGAGGCTAAGAATCGAAGAACAACAACGACAACAAGAACAACACGCACTCGAAGTCGAACGGAGCTTTACGGAGATGACGTTAATGCCGAAATCTGCTACGAATTGTTCGTACTTTAGCTATCAGATGAAAGAACTAAGACTTCCAGTTCCAGAAGAGAGTTTTGATCGTATGATGAATATTATGAAAAGTTTCTCCGGCCCGGGATCTGGCTCTAGTTCGGGGTGTAGCTCGATAGTCGATGAACAAAAACCACCCCGAAACACGGCGGCTTGGAATCACCCCGAGCTGAACCTCGACGACAGCGAAGGATACAATCTACCAGACAGCCCATTTGAGTCTGGAACAGGAAACAACAACACATAG

Protein sequence

MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQLHLLALRSMPAPVSSPPPSPSSGAFVPFAMRDSRTSLYPDSMYELQKPAHFFCLDDHIEPPNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSNQMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDTSPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQLHSNYDSASTMLRLRIEEQQRQQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELRLPVPEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNTAAWNHPELNLDDSEGYNLPDSPFESGTGNNNT

Homology

[Close]

BLAST of CmoCh16G009840 vs. ExPASy Swiss-Prot
Match: Q9SJ41 (Zinc finger CCCH domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=At2g05160 PE=2 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.1e-96
Identity = 233/570 (40.88%), Postives = 332/570 (58.25%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLL-HDHYDQEMARLALAPDHDIQQVVHLVKT 60
           M  +E   +V  RI +++PEN   I  +LLL  ++ +++M RLA  PD  +  V++ VK 
Sbjct: 1   MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60

Query: 61  QLHLLALRSMPAPVSSPPPSPSSGAFV---PFAMRDS---RTSLYPDS--MYELQKPAHF 120
           +L   +     +P S   P+P  G+F    P ++  S   +T  + +S  M  LQ    F
Sbjct: 61  ELARNS-HHYHSPPSDHIPTPKFGSFTGSSPLSVSVSPPMKTGFWENSTEMDTLQNNLQF 120

Query: 121 FCLDDHIEPP---NGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNC 180
              +D +  P   NG  S +   +           RT+R   ++ E+  +ICHY++KG C
Sbjct: 121 LNFEDPLTSPEFSNGFFSQERQCL---------PLRTSRRSPSLPEFPVKICHYFNKGFC 180

Query: 181 KHGNSCRYLHSNQMP--GSFSQMYNVN-----DDHVFRPGSLERLEFEIVELLRSRRGSP 240
           KHGN+CRY H   +P   SF+QM+N N     ++HV  P SLE+LE EI+ELL+ RRG+P
Sbjct: 181 KHGNNCRYFHGQIIPERESFAQMFNPNNNLSDEEHVVSPVSLEKLEGEIIELLKLRRGAP 240

Query: 241 ISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSV 300
           ISIASLPM+YYEKYG+ LQAEGYLTESQRHGK+G+SLTKLL RLK++I+++DRPHGQHSV
Sbjct: 241 ISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNTIRLVDRPHGQHSV 300

Query: 301 ILAEDALKFIDHRKDKNDTSPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRI 360
           ILAEDA KF+++  ++N+    ++ +RQIY+TFPA+SSFTE DVS YF+  YG VEDVRI
Sbjct: 301 ILAEDASKFVEYTGERNEHGAILAGSRQIYLTFPAESSFTEHDVSIYFT-SYGHVEDVRI 360

Query: 361 PCQQRRMFGFVTFHSVETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQ 420
           PCQQ+RM+GFVTF S ETVK IL++ + H IC ARVLVKPYREKS+              
Sbjct: 361 PCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLVKPYREKSR-------------- 420

Query: 421 QQAYFSSHYNSLEPEQLHSNY---DSASTMLRLRIEEQQRQQEQHALEVERSFTEMTLMP 480
             + +  +Y  L   +  S +   D     L  R+ E  R ++    E E+S ++     
Sbjct: 421 -SSRYLDNYKPLHGMRYGSKFIERDIEMNTLPPRVSESSRMRKPFLSEPEQSVSK----- 480

Query: 481 KSATNCSYFSYQMKELRL---PVPEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPR 540
              TN SY  +   + +L      EE  +R+  ++   +           ++++     R
Sbjct: 481 SLPTNYSYLGFSSDDFKLTSNAEQEEQAERLSYLLDYLNTE--------DNVMNITTNYR 529

Query: 541 NTAAWNHPELNLDDSEGYNLPDSPFESGTG 546
           +     H E    DS+  NLP+SPF S +G
Sbjct: 541 DNDRRTHCESL--DSQVLNLPESPFSSLSG 529

[Close]

BLAST of CmoCh16G009840 vs. ExPASy Swiss-Prot
Match: Q6ZK57 (Zinc finger CCCH domain-containing protein 54 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0126700 PE=2 SV=2)

HSP 1 Score: 289.7 bits (740), Expect = 7.1e-77
Identity = 219/623 (35.15%), Postives = 307/623 (49.28%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60
           ME+ E  K+ F R+ +++PE+V  I   +LL +  + E+ +LA  P+  +   +   K  
Sbjct: 50  MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 109

Query: 61  LHLLALRSMPAPVSSPPP-----------------------------------SPSSGAF 120
           L ++  R   A    PP                                    SP++ A 
Sbjct: 110 LTVIYARCSAAAAHGPPGGGGVGVGGGGGYHQQPQQLFSRPPVPACGGVRHHYSPAAAAA 169

Query: 121 VPFAMRDSRTSLYPDS---------MYELQKPAHFFCLDDHIEPPNGL---------SSY 180
             F  +      +PDS           E   P     +D   E P  L         +++
Sbjct: 170 AAFGYQVQSPQYWPDSPPAPPTKAAQQEFAPPG--LVVDASAEGPYPLRGGQHVLDDNNF 229

Query: 181 DCSY--------VENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHS 240
              Y          N       S   AR  + +   +P  CHY+SKG CK+G +C Y H 
Sbjct: 230 GGGYYYPAGEDAFPNGGGGGGGSPARARRSNGLSTRRP--CHYFSKGICKNGQNCHYSHH 289

Query: 241 NQMPGSFS------QMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYE 300
                + +       +YN     V  PGSLE LE EI ELL SRRG P+SIASLP +Y E
Sbjct: 290 QVYQDALAGAAINGDVYNHQPGGV-TPGSLETLEMEITELLNSRRGQPVSIASLPTLYGE 349

Query: 301 KYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDH 360
           KYGK LQA+GYLTESQRHGK+G+SLT+LL+RL + I+VI+RPHGQHSV+LAEDA K++D 
Sbjct: 350 KYGKGLQADGYLTESQRHGKAGYSLTRLLSRL-NKIRVIERPHGQHSVVLAEDAAKYMDF 409

Query: 361 R----KDKNDTSPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMF 420
           R        DT    +S+ QIY+TFPA+S+F EDDV++YF   YG V DVRIPCQ+RRMF
Sbjct: 410 RGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVANYFG-QYGPVRDVRIPCQERRMF 469

Query: 421 GFVTFHSVETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSH 480
           GFV+F S ETV  IL   + H ICG+RVLVKPYREKSK ++R   D I  +    Y    
Sbjct: 470 GFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKCVDRTCVDNI--KSMVPYCPPR 529

Query: 481 YNSLEPEQLHSNYDSASTMLRLRIEEQQRQQEQHALEVERSFTEMTLMPKSATNCSYFSY 540
           +   + E   + YD AS ++R ++ E++    +  LE+ER    +  +       +YF  
Sbjct: 530 FFEFDQELYTAEYD-ASRLMRKQLAEKR----EMLLEMERRRATVRRLESMPPQFAYFDC 589

Query: 541 QMKELRLPVPEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNTAAWNHPELNLDD 550
            +++       +   + +++M     P   S      + + Q PP  T A N      DD
Sbjct: 590 SIEDASPLHSLQDDSKQLDLM----NPSLASPDPLEIVSNSQAPP--TQAGN----IYDD 648

[Close]

BLAST of CmoCh16G009840 vs. ExPASy Swiss-Prot
Match: Q84ZT0 (Putative zinc finger CCCH domain-containing protein 51 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0583300 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 7.0e-48
Identity = 115/248 (46.37%), Postives = 161/248 (64.92%), Query Frame = 0


Query: 148 HHSTVVEYQPRICHY-YSKGNCKHGNSCRYLHSNQMPGSFSQMYNVNDDHVFRPGSLERL 207
           H S+    +P  CH+ + +G CK G +C++ H     GS  +++N    H F   SL +L
Sbjct: 172 HSSSKSSSKP--CHFHFFRGYCKKGVNCQFFH-----GSVPELHNPRQVHPF--ASLSKL 231

Query: 208 EFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK 267
           + EI ELL      P+++  LP +Y+EKYGK L+ +G+LTESQ+HG++G SLT LL  L 
Sbjct: 232 DMEIRELLIG-IPPPVAVDRLPSMYFEKYGKPLRPDGWLTESQQHGRTGCSLTSLLMGL- 291

Query: 268 SSIQVIDRPHGQHSVILAEDA-LKFID-----HRKDKNDTSPNVSSARQIYMTFPADSSF 327
           ++I+V++R HGQ+ V+L EDA  K++D     H  +  DT    + + QIYMTFP  S F
Sbjct: 292 NTIRVVEREHGQYHVVLVEDARKKYMDCLGLAHSCNLMDTG---TGSNQIYMTFPVHSKF 351

Query: 328 TEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVETVKLILSEDSEHLICGARVLVK 387
           T+DDV +YF   +G V  VRIP Q++RMFGFV+F   ETV+LILS+ + H ICG RVLVK
Sbjct: 352 TDDDVENYFK-QFGPVSGVRIPYQEKRMFGFVSFLYTETVRLILSKGTAHFICGLRVLVK 404

Query: 388 PYREKSKL 389
            Y EKS+L
Sbjct: 412 RYMEKSEL 404

[Close]

BLAST of CmoCh16G009840 vs. ExPASy Swiss-Prot
Match: Q0D3J9 (Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0682400 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.4e-35
Identity = 178/645 (27.60%), Postives = 277/645 (42.95%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60
           M+  E  K+VF RI  +DP++   I+ FLL+ DH ++EM RLA  P+  +  V+   + +
Sbjct: 1   MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60

Query: 61  LHLLALRSMPAPVS------------------------SPPP----SPSSGAFVP-FAMR 120
           L LL       P S                        +P P    SPSS A  P F+  
Sbjct: 61  LGLLPASGPGTPTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVFSRN 120

Query: 121 DSRTSLYPDSMY----ELQKPAH-------FFCLD----------------------DHI 180
           +S ++   + M     EL  PA+       FF  D                       H 
Sbjct: 121 NSISNGAGEEMVGLGDELISPANGGGPPSPFFGGDPLMDELQLQDQLAFLNEGGVPAGHQ 180

Query: 181 EP-------------PNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSK 240
            P               GL SY+  +        + +S +            + C YY++
Sbjct: 181 MPMFDGGECRSPGGGDGGLFSYNLGWANGGPGHRRSASVSELCLGGADGLGWKPCLYYAR 240

Query: 241 GNCKHGNSCRYLHSNQMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIA 300
           G CK+G++CR++H      +  +M          P ++E+   +  + L   +   ++ A
Sbjct: 241 GYCKNGSACRFVHGGLPDDAAGKM---------DPSAVEQ---QCQDFLIRSKSQRLAAA 300

Query: 301 SLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAE 360
           + P   Y   G +  +    T+          L+ LL + +   +          ++  +
Sbjct: 301 AFP---YSPTGSLPGSPSAATK---------CLSLLLQQQQQQNESQRAAAAAALMLGGD 360

Query: 361 DALKFIDH-RKDKNDTSPNVS-SARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPC 420
           +A KF+   R ++ D +  ++  +RQIY+TFPADS+F E+DVS+YFSI YG V DVRIP 
Sbjct: 361 EAHKFMGRPRLERADFASMMNPGSRQIYLTFPADSTFREEDVSNYFSI-YGPVHDVRIPY 420

Query: 421 QQRRMFGFVTFHSVETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQ 480
           QQ+RMFGFVTF   ETVKLIL++ + H IC ARVLVKPY+EK K+ ++  +    Q  ++
Sbjct: 421 QQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQ--HQPGER 480

Query: 481 AYFSS-----HYNSLEPEQLH-------SNYDSASTM-LRLRIEEQQRQQE-QHALEVER 540
             FSS       ++ +P  +H        + +SA+ M LR ++EEQQ+  E Q A+E   
Sbjct: 481 VDFSSCTTPTGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQQAAELQQAIE--- 540

Query: 541 SFTEMTLMPKSATNCSYFSYQMKELRLPVP-EESFDRMMNIMKSFS---------GPGSG 545
                 L  +         ++ +    P P    F        +           G GSG
Sbjct: 541 ------LHSRRLMGLQLLDFKSRAAAAPTPIGNPFSASQTAANATGESPPDSGELGKGSG 600

[Close]

BLAST of CmoCh16G009840 vs. ExPASy Swiss-Prot
Match: Q10LZ9 (Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0329200 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.0e-35
Identity = 184/652 (28.22%), Postives = 276/652 (42.33%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60
           M+  E  K+VF RI  +DP++   I+  LL+ DH D+EM RLA  P+  +  V+   + +
Sbjct: 1   MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60

Query: 61  LHLL----ALRSMPAPVSS--------------PPPSPSSGAFV-PFAMRDSR-TSLYPD 120
           L LL    A  S P   ++              P PSPSS A   PF+  +S       D
Sbjct: 61  LALLPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWAQAQPFSRSNSMGNGGAAD 120

Query: 121 SMY----ELQKPAH-----------FF------CLDDH---------------IEPPNGL 180
            M     EL  P +           FF       LDD                + P + L
Sbjct: 121 EMVGAGEELMSPLNGGGGAAANAPPFFPRGGDALLDDFELQEQLAFLHDGAGGVNPGHAL 180

Query: 181 SSYDCSYV------ENAAMVN-----KFSSRTARHHSTVVE-------YQPRICHYYSKG 240
            ++D +        E+  M+             R  ++V E       +  + C YY++G
Sbjct: 181 QAFDGAECRSPGPGESGGMLPYGLAWANGGPGHRRSASVNELCLGGDGFGWKPCLYYARG 240

Query: 241 NCKHGNSCRYLHSNQMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIAS 300
            CK+G++CR++H             ++DD      + E+ + +  + L   +   +  A+
Sbjct: 241 FCKNGSTCRFVHG-----------GLSDDAAMDATTAEQQQCQ--DFLLRSKSQRLGPAA 300

Query: 301 LPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVIL--- 360
            P              G L  S        SL      L+   Q  D      + ++   
Sbjct: 301 FP----------FTPTGSLPASPSATSKCLSLL-----LQQQQQHNDNQRAAAAALMLAG 360

Query: 361 AEDALKFIDH-RKDKNDTSPNVS-SARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRI 420
            ++A KF+   R D+ D +  ++  +RQIY+TFPADS+F E+DVS+YFSI YG V DVRI
Sbjct: 361 GDEAHKFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSI-YGPVHDVRI 420

Query: 421 PCQQRRMFGFVTFHSVETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQ 480
           P QQ+RMFGFVTF   ETVKLIL++ + H IC ARVLVKPY+EK K+      D+  +QQ
Sbjct: 421 PYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKV-----PDKYRKQQ 480

Query: 481 Q-----------QAYFSSHYNSLEPEQLHSNYDSASTMLRLRIEEQQRQQE-QHALEV-E 540
           Q            A     ++ L    L  +  +   MLR ++EEQQ+  E Q A+++  
Sbjct: 481 QGDFCCMSPTGLDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAELQQAIDLHS 540

Query: 541 RSFTEMTLMPKSATNCSYFSYQMKELRLPVP----------------EESFDRMMNIMKS 545
           R    + L+    ++ +  + +   + LP P                E        +M S
Sbjct: 541 RRLIGLQLLDLK-SSAAVHAAETTTMSLPTPITNAFTSGQPGATTIVESPPSSTGQLMAS 600

[Close]

BLAST of CmoCh16G009840 vs. ExPASy TrEMBL
Match: A0A6J1EWX1 (zinc finger CCCH domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111438765 PE=4 SV=1)

HSP 1 Score: 1100.9 bits (2846), Expect = 0.0e+00
Identity = 549/549 (100.00%), Postives = 549/549 (100.00%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60
           MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ
Sbjct: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60

Query: 61  LHLLALRSMPAPVSSPPPSPSSGAFVPFAMRDSRTSLYPDSMYELQKPAHFFCLDDHIEP 120
           LHLLALRSMPAPVSSPPPSPSSGAFVPFAMRDSRTSLYPDSMYELQKPAHFFCLDDHIEP
Sbjct: 61  LHLLALRSMPAPVSSPPPSPSSGAFVPFAMRDSRTSLYPDSMYELQKPAHFFCLDDHIEP 120

Query: 121 PNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSN 180
           PNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSN
Sbjct: 121 PNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSN 180

Query: 181 QMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQ 240
           QMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQ
Sbjct: 181 QMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQ 240

Query: 241 AEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDT 300
           AEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDT
Sbjct: 241 AEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDT 300

Query: 301 SPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVETV 360
           SPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVETV
Sbjct: 301 SPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVETV 360

Query: 361 KLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQLHS 420
           KLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQLHS
Sbjct: 361 KLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQLHS 420

Query: 421 NYDSASTMLRLRIEEQQRQQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELRLPVPE 480
           NYDSASTMLRLRIEEQQRQQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELRLPVPE
Sbjct: 421 NYDSASTMLRLRIEEQQRQQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELRLPVPE 480

Query: 481 ESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNTAAWNHPELNLDDSEGYNLPDSPF 540
           ESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNTAAWNHPELNLDDSEGYNLPDSPF
Sbjct: 481 ESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNTAAWNHPELNLDDSEGYNLPDSPF 540

Query: 541 ESGTGNNNT 550
           ESGTGNNNT
Sbjct: 541 ESGTGNNNT 549

[Close]

BLAST of CmoCh16G009840 vs. ExPASy TrEMBL
Match: A0A6J1L8K9 (zinc finger CCCH domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111500284 PE=4 SV=1)

HSP 1 Score: 1010.4 bits (2611), Expect = 2.9e-291
Identity = 513/549 (93.44%), Postives = 525/549 (95.63%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60
           ME SEYR+IVFHRISKIDPENVE+IICF+LLHDHYDQEMARLALAPDH IQQVVHLVK Q
Sbjct: 1   MEFSEYRRIVFHRISKIDPENVEDIICFILLHDHYDQEMARLALAPDHHIQQVVHLVKIQ 60

Query: 61  LHLLALRSMPAPVSSPPPSPSSGAFVPFAMRDSRTSL-YPDSMYELQKPAHFFCLDDHIE 120
           LHLLALRSMPAP  SPPPS S GAFVPF++RDS   L YPDSMYELQ PA FFCLDD IE
Sbjct: 61  LHLLALRSMPAP--SPPPSSSPGAFVPFSIRDSHMPLVYPDSMYELQNPAQFFCLDDCIE 120

Query: 121 PPN-GLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLH 180
           P N GLSSYDCSYVENAAMVNKFSSRTARH+ST+VEYQPR CHYYSKGNCKHGNSCRYLH
Sbjct: 121 PSNRGLSSYDCSYVENAAMVNKFSSRTARHYSTMVEYQPRTCHYYSKGNCKHGNSCRYLH 180

Query: 181 SNQMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKV 240
           SNQMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKV
Sbjct: 181 SNQMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKV 240

Query: 241 LQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKN 300
           LQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKN
Sbjct: 241 LQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKN 300

Query: 301 DTSPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVE 360
           +TSP VSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVE
Sbjct: 301 NTSPTVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVE 360

Query: 361 TVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQL 420
           TVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQL
Sbjct: 361 TVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQL 420

Query: 421 HSNYDSASTMLRLRIEEQQRQQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELRLPV 480
           HSNYDSAST+LRLRIEE   QQ+QHALEVERSF+EMTLMPKSATNCSYFSYQMKELRLPV
Sbjct: 421 HSNYDSASTILRLRIEE---QQQQHALEVERSFSEMTLMPKSATNCSYFSYQMKELRLPV 480

Query: 481 PEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNTAAWNHPELNLDDSEGYNLPDS 540
           PEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPP N AAWNHPELNLD+SEGYNLPDS
Sbjct: 481 PEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPGNAAAWNHPELNLDNSEGYNLPDS 540

Query: 541 PFESGTGNN 548
           PFESGT NN
Sbjct: 541 PFESGTANN 544

[Close]

BLAST of CmoCh16G009840 vs. ExPASy TrEMBL
Match: A0A0A0L4W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061520 PE=4 SV=1)

HSP 1 Score: 711.4 bits (1835), Expect = 2.8e-201
Identity = 386/561 (68.81%), Postives = 443/561 (78.97%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60
           ME S + + VFHRI++IDP+NV  II FLLLHD+ DQEMARLALA +  I++VV L KT+
Sbjct: 36  MEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTE 95

Query: 61  LHLLALRSMPAPVS-----SPPPSPSSGAFVPFAMRDSRTSLY------PDSMYELQKPA 120
           LH   LRSMP PVS     +  PS S   +    + +  T  Y        SMY+LQ  A
Sbjct: 96  LH--QLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYDLQNAA 155

Query: 121 HFFCLDDHIEPPN-GLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNC 180
           + FCL+DH+E  N GLSS+DCSY +N  M+N FS+R  RH+S V ++QPR CHYY+KG C
Sbjct: 156 NLFCLEDHMEQSNSGLSSFDCSYADN--MLNSFSTRNTRHYSNVPDFQPRTCHYYNKGFC 215

Query: 181 KHGNSCRYLHSNQMPGSFSQMY----NVNDDHVFRPGSLERLEFEIVELLRSRRGSPISI 240
           KHGNSCRYLHSN +PGS S +Y    NVNDDHVFRPGSLERLEFEIVELL+SRRGSPISI
Sbjct: 216 KHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISI 275

Query: 241 ASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILA 300
           ASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQVIDRPHGQH+VILA
Sbjct: 276 ASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAVILA 335

Query: 301 EDALKFIDHRKDKNDTSPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQ 360
           EDA KF+DHRKD+ND  P VSSARQIYMTFPADS+FTEDDVSDYFS+HYG+VEDVRIPCQ
Sbjct: 336 EDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQ 395

Query: 361 QRRMFGFVTFHSVETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQA 420
           QRRMFGFVTFHS+ETVKLILS+DSEHLICGARVLVKPYREKSKLLERK Q+RIEQQ Q  
Sbjct: 396 QRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQHQD- 455

Query: 421 YFSSHYNSLEPEQLHS---NYDSASTMLRLRIEEQQRQQEQHALEVERSFTEMTLMPKSA 480
           YF+SHYNSLE EQLHS    YD   TMLRLR+EEQQ+QQ     E+ERS +EMTL+ KS 
Sbjct: 456 YFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQR----ELERSLSEMTLVQKSV 515

Query: 481 TNCSYFSYQMKELRLPVPE--ESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNTAA 540
            N  YFSYQM EL++PVPE  ESF+ +M+I+   +  GS SSS  +    +Q  P+N   
Sbjct: 516 VNQPYFSYQMNELKVPVPEATESFEHLMDILNVLNS-GSNSSSSSTDDNKQQPHPQNVTD 575

[Close]

BLAST of CmoCh16G009840 vs. ExPASy TrEMBL
Match: A0A6J1F359 (zinc finger CCCH domain-containing protein 18-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440872 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 1.8e-192
Identity = 388/609 (63.71%), Postives = 454/609 (74.55%), Query Frame = 0


Query: 2   ELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQL 61
           E SE  +IV +RIS+IDPENV  II FLLLHDH DQEMARLAL PDH + QVVHLVKT+L
Sbjct: 14  EFSECTRIVHNRISRIDPENVRKIIGFLLLHDHGDQEMARLALGPDHYMLQVVHLVKTEL 73

Query: 62  HLLALRSMP----------APVSSPPPSP------SSGAFVPFAMRDSR----------- 121
           HL+ALRSMP          A  S PPPSP      S G FVPFA+  +R           
Sbjct: 74  HLIALRSMPLSMLTPDTPLALPSPPPPSPPLSTSLSMGGFVPFALSRNRLFPSSPSTPQQ 133

Query: 122 ----------TSLYPDSMYELQKPAHFFCLDDHIEPPN-GLSSYDCSYVENAAMVNKFSS 181
                     T  Y DSMYELQ PA FF LDDH+EPPN GLS YDCSYV++A +VN  S+
Sbjct: 134 LTDKPTPDFITLSYTDSMYELQNPAQFFSLDDHVEPPNSGLSGYDCSYVDHAGLVNNLST 193

Query: 182 R-TARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSNQMPGSFSQMYN---VNDDHVFR 241
           R TARH+STV EY P+ICHYY+KG CKHG  CRYLH+N +  S SQ+YN   VN+DHVFR
Sbjct: 194 RTTARHYSTVPEYHPKICHYYNKGYCKHGYGCRYLHTNPIFESVSQVYNGNSVNEDHVFR 253

Query: 242 PGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLT 301
           PGSLE+LEFEIVELL+SRRG+PISIASLPMIYYE YGKVLQAEGYLTESQRHGKSGFSLT
Sbjct: 254 PGSLEKLEFEIVELLKSRRGNPISIASLPMIYYENYGKVLQAEGYLTESQRHGKSGFSLT 313

Query: 302 KLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDTSPN---VSSARQIYMTFPA 361
           KLLTRLK SIQVIDRPHGQH+VILAEDA +FIDHR +KND  P+   VSSARQIY+TFPA
Sbjct: 314 KLLTRLK-SIQVIDRPHGQHAVILAEDAPRFIDHRTEKNDHGPHGPIVSSARQIYLTFPA 373

Query: 362 DSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVETVKLILSEDSEHLICGAR 421
           DS+FTEDDVSDYFS  YGLVEDVRIPCQQ+RMFGFVTF+++ETV LILS+D+EHLICGAR
Sbjct: 374 DSNFTEDDVSDYFSDQYGLVEDVRIPCQQKRMFGFVTFYNIETVNLILSQDNEHLICGAR 433

Query: 422 VLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHY-NSLEPEQLHSNYDSASTMLRLRIE- 481
           VLVKPYREKSK L+R+NQ++IE  QQ+ Y++S+Y NSLE EQLHS+Y+  S M  LRIE 
Sbjct: 434 VLVKPYREKSK-LDRRNQEKIE--QQKLYYASYYNNSLETEQLHSSYED-SRMFSLRIEQ 493

Query: 482 ------EQQRQQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELRLPVPEESF----- 541
                 +QQ+QQ+Q A EVER  +EM LM KS  N  YFSYQMK+L +P    SF     
Sbjct: 494 HQQHQQQQQQQQQQQAYEVERRLSEMNLMVKSVMNQPYFSYQMKQLDVPEDHFSFPIAER 553

Query: 542 -DRMMNIMKSFSGPGSGSS----SGCSSIVDEQKPPRNTAAWNHPELNLDDSEGYNLPDS 548
            D +++ +K+ +G G+G+S    +G  S     KP    A WNH  ++L +SEGYNLP+S
Sbjct: 554 LDNLLDALKTGAGAGAGASASAGAGAGSSGHNNKPAE--ADWNHLVIDL-ESEGYNLPES 613

[Close]

BLAST of CmoCh16G009840 vs. ExPASy TrEMBL
Match: A0A6J1KX51 (zinc finger CCCH domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111498363 PE=4 SV=1)

HSP 1 Score: 679.9 bits (1753), Expect = 9.1e-192
Identity = 384/609 (63.05%), Postives = 452/609 (74.22%), Query Frame = 0


Query: 2   ELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQL 61
           E SE  +IV +RIS+IDPENV  II FLLLHDH DQEMARLAL PDH + QVVHLVKT+L
Sbjct: 14  EFSECTRIVHNRISRIDPENVRKIIGFLLLHDHGDQEMARLALGPDHYMLQVVHLVKTEL 73

Query: 62  HLLALRSMP----------APVSSPPPSP------SSGAFVPFAMRDSR----------- 121
           HL+ALRSMP          A   SPPPSP       +G F+PFA+  +R           
Sbjct: 74  HLIALRSMPLSMLTPETPLALPPSPPPSPPLSRSLPTGGFIPFALSRNRLFPSSPSTPQQ 133

Query: 122 ----------TSLYPDSMYELQKPAHFFCLDDHIEPPN-GLSSYDCSYVENAAMVNKFSS 181
                     T  Y DSMYELQ PA FF LDDH+EPPN GLS YDCSYV++A +VN  S+
Sbjct: 134 LTDKPTPDFITLSYTDSMYELQNPAQFFSLDDHVEPPNSGLSGYDCSYVDHAGLVNNLST 193

Query: 182 R-TARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSNQMPGSFSQMYN---VNDDHVFR 241
           R TARH+STV EY P+ICHYY+KG CKHG  CRYLH+N +  S SQ+YN   VN+DHVFR
Sbjct: 194 RTTARHYSTVPEYHPKICHYYNKGYCKHGYGCRYLHTNPIFESVSQVYNGNSVNEDHVFR 253

Query: 242 PGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLT 301
           PGSLE+LEFEIVELL+SRRG+PISIASLPMIYYE YGKVLQAEGYLTESQRHGKSGFSLT
Sbjct: 254 PGSLEKLEFEIVELLKSRRGNPISIASLPMIYYENYGKVLQAEGYLTESQRHGKSGFSLT 313

Query: 302 KLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDTSPN---VSSARQIYMTFPA 361
           KLLTRLK SIQVIDRPHGQH+VILAEDA +FIDHR +KND  P+   VSSARQIY+TFPA
Sbjct: 314 KLLTRLK-SIQVIDRPHGQHAVILAEDAPRFIDHRTEKNDHGPHGPIVSSARQIYLTFPA 373

Query: 362 DSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVETVKLILSEDSEHLICGAR 421
           DS+FTEDDVSDYFS  YGLVEDVRIPCQQ+RMFGFVTF+++ETV LILS+D+EHLICGAR
Sbjct: 374 DSNFTEDDVSDYFSDQYGLVEDVRIPCQQKRMFGFVTFYNIETVNLILSQDNEHLICGAR 433

Query: 422 VLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHY-NSLEPEQLHSNYDSASTMLRLRIE- 481
           VLVKPYREKSK L+R+NQ++IE  QQ+ Y++SHY NSLE EQLHS Y+  S M  LRIE 
Sbjct: 434 VLVKPYREKSK-LDRRNQEKIE--QQKLYYASHYNNSLETEQLHSGYED-SRMFNLRIEQ 493

Query: 482 ------EQQRQQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELRLPVPEESF----- 541
                 +QQ+QQ+Q A EVER  +EM LM KS  N  YFSYQMK+L +P    SF     
Sbjct: 494 QQQQQQQQQQQQQQQAYEVERRLSEMNLMVKSVMNQPYFSYQMKQLDVPEDHFSFPIAER 553

Query: 542 -DRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNT----AAWNHPELNLDDSEGYNLPDS 548
            D +++ +K+ +G  + +S+  ++ V       N     A WNH  ++L +SEGYNLP+S
Sbjct: 554 LDNLLDALKTGAGASASASASANAGVGAGSSGHNNKPAEADWNHLVIDL-ESEGYNLPES 613

[Close]

BLAST of CmoCh16G009840 vs. NCBI nr
Match: XP_022932409.1 (zinc finger CCCH domain-containing protein 18-like [Cucurbita moschata])

HSP 1 Score: 1100.9 bits (2846), Expect = 0.0e+00
Identity = 549/549 (100.00%), Postives = 549/549 (100.00%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60
           MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ
Sbjct: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60

Query: 61  LHLLALRSMPAPVSSPPPSPSSGAFVPFAMRDSRTSLYPDSMYELQKPAHFFCLDDHIEP 120
           LHLLALRSMPAPVSSPPPSPSSGAFVPFAMRDSRTSLYPDSMYELQKPAHFFCLDDHIEP
Sbjct: 61  LHLLALRSMPAPVSSPPPSPSSGAFVPFAMRDSRTSLYPDSMYELQKPAHFFCLDDHIEP 120

Query: 121 PNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSN 180
           PNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSN
Sbjct: 121 PNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSN 180

Query: 181 QMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQ 240
           QMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQ
Sbjct: 181 QMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQ 240

Query: 241 AEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDT 300
           AEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDT
Sbjct: 241 AEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDT 300

Query: 301 SPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVETV 360
           SPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVETV
Sbjct: 301 SPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVETV 360

Query: 361 KLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQLHS 420
           KLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQLHS
Sbjct: 361 KLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQLHS 420

Query: 421 NYDSASTMLRLRIEEQQRQQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELRLPVPE 480
           NYDSASTMLRLRIEEQQRQQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELRLPVPE
Sbjct: 421 NYDSASTMLRLRIEEQQRQQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELRLPVPE 480

Query: 481 ESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNTAAWNHPELNLDDSEGYNLPDSPF 540
           ESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNTAAWNHPELNLDDSEGYNLPDSPF
Sbjct: 481 ESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNTAAWNHPELNLDDSEGYNLPDSPF 540

Query: 541 ESGTGNNNT 550
           ESGTGNNNT
Sbjct: 541 ESGTGNNNT 549

[Close]

BLAST of CmoCh16G009840 vs. NCBI nr
Match: KAG6577504.1 (Zinc finger CCCH domain-containing protein 18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1078.2 bits (2787), Expect = 0.0e+00
Identity = 547/591 (92.55%), Postives = 548/591 (92.72%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60
           MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ
Sbjct: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60

Query: 61  LHLLALRSMPAPVSSPPPSPSSGAFVPFAMRDSRTSLYPDSMYELQKPAHFFCLDDHIEP 120
           LHLLALRSMPAPVSSPPPSPSSG FVPFAMRDSRTSLYPDSMYELQKPAHFFCLDDHIEP
Sbjct: 61  LHLLALRSMPAPVSSPPPSPSSGGFVPFAMRDSRTSLYPDSMYELQKPAHFFCLDDHIEP 120

Query: 121 PNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSN 180
           PNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSN
Sbjct: 121 PNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSN 180

Query: 181 QMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQ 240
           QMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQ
Sbjct: 181 QMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQ 240

Query: 241 AEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDT 300
           AEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDT
Sbjct: 241 AEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDT 300

Query: 301 SPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVETV 360
           SPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVETV
Sbjct: 301 SPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVETV 360

Query: 361 KLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQLHS 420
           KLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQLHS
Sbjct: 361 KLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQLHS 420

Query: 421 NYDSASTMLRLRIE------------------------------------------EQQR 480
           NYDSASTMLRLRIE                                          EQQR
Sbjct: 421 NYDSASTMLRLRIEEQQRQQEQQRQQEQQRQQEQQRQQEQQRQQEQQRQQEQQRQQEQQR 480

Query: 481 QQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELRLPVPEESFDRMMNIMKSFSGPGS 540
           QQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELRLPVPEESFDRMMNIMKSFSGPGS
Sbjct: 481 QQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELRLPVPEESFDRMMNIMKSFSGPGS 540

Query: 541 GSSSGCSSIVDEQKPPRNTAAWNHPELNLDDSEGYNLPDSPFESGTGNNNT 550
           GSSSGCSS+VDEQKPPRNTAAWNHPELNLDDSEGYNLPDSPFESGTGNNNT
Sbjct: 541 GSSSGCSSLVDEQKPPRNTAAWNHPELNLDDSEGYNLPDSPFESGTGNNNT 591

[Close]

BLAST of CmoCh16G009840 vs. NCBI nr
Match: KAG7015561.1 (Zinc finger CCCH domain-containing protein 18 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1078.2 bits (2787), Expect = 0.0e+00
Identity = 547/579 (94.47%), Postives = 548/579 (94.65%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60
           MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ
Sbjct: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60

Query: 61  LHLLALRSMPAPVSSPPPSPSSGAFVPFAMRDSRTSLYPDSMYELQKPAHFFCLDDHIEP 120
           LHLLALRSMPAPVSSPPPSPSSGAFVPFAMRDSRTSLYPDSMYELQKPAHFFCLDDHIEP
Sbjct: 61  LHLLALRSMPAPVSSPPPSPSSGAFVPFAMRDSRTSLYPDSMYELQKPAHFFCLDDHIEP 120

Query: 121 PNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSN 180
           PNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSN
Sbjct: 121 PNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLHSN 180

Query: 181 QMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQ 240
           QMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQ
Sbjct: 181 QMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKVLQ 240

Query: 241 AEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDT 300
           AEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDT
Sbjct: 241 AEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKNDT 300

Query: 301 SPNVSSARQIYMTFPADSSFTEDDVSDYFS------IHYGLVEDVRIPCQQRRMFGFVTF 360
           SPNVSSARQIYMTFPADSSFTEDDVSDYF       IHYGLVEDVRIPCQQRRMFGFVTF
Sbjct: 301 SPNVSSARQIYMTFPADSSFTEDDVSDYFRQNAKCFIHYGLVEDVRIPCQQRRMFGFVTF 360

Query: 361 HSVETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLE 420
           HSVETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLE
Sbjct: 361 HSVETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLE 420

Query: 421 PEQLHSNYDSASTMLRLRIE------------------------EQQRQQEQHALEVERS 480
           PEQLHSNYDSASTMLRLRIE                        EQQRQQEQHALEVERS
Sbjct: 421 PEQLHSNYDSASTMLRLRIEEQQRQQEQQRQQEQQRQQEQQRQQEQQRQQEQHALEVERS 480

Query: 481 FTEMTLMPKSATNCSYFSYQMKELRLPVPEESFDRMMNIMKSFSGPGSGSSSGCSSIVDE 540
           FTEMTLMPKSATNCSYFSYQMKELRLPVPEESFDRMMNIMKSFSGPGSGSSSGCSS+VDE
Sbjct: 481 FTEMTLMPKSATNCSYFSYQMKELRLPVPEESFDRMMNIMKSFSGPGSGSSSGCSSLVDE 540

Query: 541 QKPPRNTAAWNHPELNLDDSEGYNLPDSPFESGTGNNNT 550
           QKPPRNTAAWNHPELNLDDSEGYNLPDSPFESGTGNNNT
Sbjct: 541 QKPPRNTAAWNHPELNLDDSEGYNLPDSPFESGTGNNNT 579

[Close]

BLAST of CmoCh16G009840 vs. NCBI nr
Match: XP_023553335.1 (zinc finger CCCH domain-containing protein 18-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1025.8 bits (2651), Expect = 1.4e-295
Identity = 519/554 (93.68%), Postives = 533/554 (96.21%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60
           ME SEYR+IVFHRISKIDP+NVE+IICF+LLHDH+DQEMARLALAPDH IQQ+V LVKTQ
Sbjct: 1   MEFSEYRRIVFHRISKIDPDNVEDIICFILLHDHHDQEMARLALAPDHHIQQLVQLVKTQ 60

Query: 61  LHLLALRSM--PAPVSSPPPSPSSGAFVPFAMRDSRTSLYPDSMYELQKPAHFFCLDDHI 120
           LHLLALRSM  P+P   PPPSPS GAF PFA+RDS   +YPDSMYELQ PA FFCLDDHI
Sbjct: 61  LHLLALRSMPSPSPPPPPPPSPSLGAFPPFAIRDSHIPVYPDSMYELQNPAQFFCLDDHI 120

Query: 121 EPPN-GLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYL 180
           EPPN GLSSYDCSYVENAAMVNKFSSRTARH+STVVEYQPRICHYYSKGNCKHGNSCRYL
Sbjct: 121 EPPNHGLSSYDCSYVENAAMVNKFSSRTARHYSTVVEYQPRICHYYSKGNCKHGNSCRYL 180

Query: 181 HSNQM-PGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYG 240
           HS+QM PGSFSQMY+VNDDHVFRPGSLERLEFEIVELLRSRR SPISIASLPMIYYEKYG
Sbjct: 181 HSSQMLPGSFSQMYDVNDDHVFRPGSLERLEFEIVELLRSRRASPISIASLPMIYYEKYG 240

Query: 241 KVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKD 300
           KVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKD
Sbjct: 241 KVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKD 300

Query: 301 KNDTSPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHS 360
           KNDTSP VSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHS
Sbjct: 301 KNDTSPTVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHS 360

Query: 361 VETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPE 420
           VETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYN+LEPE
Sbjct: 361 VETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNNLEPE 420

Query: 421 QLHSNYDSASTMLRLRIEEQQ-RQQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELR 480
           QLHSNYDSASTMLRLRIEEQQ RQQ+QHALEVERSFTEMTLMPKSATNCSYFSYQMKELR
Sbjct: 421 QLHSNYDSASTMLRLRIEEQQRRQQQQHALEVERSFTEMTLMPKSATNCSYFSYQMKELR 480

Query: 481 LPVPEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNTAAWNHPELNLDDSEGYNL 540
           LPVPEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRN AAWNHPELNLDDSEGYNL
Sbjct: 481 LPVPEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNAAAWNHPELNLDDSEGYNL 540

Query: 541 PDSPFESGTGNNNT 550
           PDSPFESGTGNNNT
Sbjct: 541 PDSPFESGTGNNNT 554

[Close]

BLAST of CmoCh16G009840 vs. NCBI nr
Match: XP_023007773.1 (zinc finger CCCH domain-containing protein 18-like [Cucurbita maxima])

HSP 1 Score: 1010.4 bits (2611), Expect = 6.0e-291
Identity = 513/549 (93.44%), Postives = 525/549 (95.63%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60
           ME SEYR+IVFHRISKIDPENVE+IICF+LLHDHYDQEMARLALAPDH IQQVVHLVK Q
Sbjct: 1   MEFSEYRRIVFHRISKIDPENVEDIICFILLHDHYDQEMARLALAPDHHIQQVVHLVKIQ 60

Query: 61  LHLLALRSMPAPVSSPPPSPSSGAFVPFAMRDSRTSL-YPDSMYELQKPAHFFCLDDHIE 120
           LHLLALRSMPAP  SPPPS S GAFVPF++RDS   L YPDSMYELQ PA FFCLDD IE
Sbjct: 61  LHLLALRSMPAP--SPPPSSSPGAFVPFSIRDSHMPLVYPDSMYELQNPAQFFCLDDCIE 120

Query: 121 PPN-GLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNCKHGNSCRYLH 180
           P N GLSSYDCSYVENAAMVNKFSSRTARH+ST+VEYQPR CHYYSKGNCKHGNSCRYLH
Sbjct: 121 PSNRGLSSYDCSYVENAAMVNKFSSRTARHYSTMVEYQPRTCHYYSKGNCKHGNSCRYLH 180

Query: 181 SNQMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKV 240
           SNQMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKV
Sbjct: 181 SNQMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPISIASLPMIYYEKYGKV 240

Query: 241 LQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKN 300
           LQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKN
Sbjct: 241 LQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILAEDALKFIDHRKDKN 300

Query: 301 DTSPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVE 360
           +TSP VSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVE
Sbjct: 301 NTSPTVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQQRRMFGFVTFHSVE 360

Query: 361 TVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQL 420
           TVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQL
Sbjct: 361 TVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQAYFSSHYNSLEPEQL 420

Query: 421 HSNYDSASTMLRLRIEEQQRQQEQHALEVERSFTEMTLMPKSATNCSYFSYQMKELRLPV 480
           HSNYDSAST+LRLRIEE   QQ+QHALEVERSF+EMTLMPKSATNCSYFSYQMKELRLPV
Sbjct: 421 HSNYDSASTILRLRIEE---QQQQHALEVERSFSEMTLMPKSATNCSYFSYQMKELRLPV 480

Query: 481 PEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNTAAWNHPELNLDDSEGYNLPDS 540
           PEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPP N AAWNHPELNLD+SEGYNLPDS
Sbjct: 481 PEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPGNAAAWNHPELNLDNSEGYNLPDS 540

Query: 541 PFESGTGNN 548
           PFESGT NN
Sbjct: 541 PFESGTANN 544

[Close]

BLAST of CmoCh16G009840 vs. TAIR 10
Match: AT2G05160.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 355.5 bits (911), Expect = 7.5e-98
Identity = 233/570 (40.88%), Postives = 332/570 (58.25%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLL-HDHYDQEMARLALAPDHDIQQVVHLVKT 60
           M  +E   +V  RI +++PEN   I  +LLL  ++ +++M RLA  PD  +  V++ VK 
Sbjct: 1   MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60

Query: 61  QLHLLALRSMPAPVSSPPPSPSSGAFV---PFAMRDS---RTSLYPDS--MYELQKPAHF 120
           +L   +     +P S   P+P  G+F    P ++  S   +T  + +S  M  LQ    F
Sbjct: 61  ELARNS-HHYHSPPSDHIPTPKFGSFTGSSPLSVSVSPPMKTGFWENSTEMDTLQNNLQF 120

Query: 121 FCLDDHIEPP---NGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQPRICHYYSKGNC 180
              +D +  P   NG  S +   +           RT+R   ++ E+  +ICHY++KG C
Sbjct: 121 LNFEDPLTSPEFSNGFFSQERQCL---------PLRTSRRSPSLPEFPVKICHYFNKGFC 180

Query: 181 KHGNSCRYLHSNQMP--GSFSQMYNVN-----DDHVFRPGSLERLEFEIVELLRSRRGSP 240
           KHGN+CRY H   +P   SF+QM+N N     ++HV  P SLE+LE EI+ELL+ RRG+P
Sbjct: 181 KHGNNCRYFHGQIIPERESFAQMFNPNNNLSDEEHVVSPVSLEKLEGEIIELLKLRRGAP 240

Query: 241 ISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSV 300
           ISIASLPM+YYEKYG+ LQAEGYLTESQRHGK+G+SLTKLL RLK++I+++DRPHGQHSV
Sbjct: 241 ISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNTIRLVDRPHGQHSV 300

Query: 301 ILAEDALKFIDHRKDKNDTSPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRI 360
           ILAEDA KF+++  ++N+    ++ +RQIY+TFPA+SSFTE DVS YF+  YG VEDVRI
Sbjct: 301 ILAEDASKFVEYTGERNEHGAILAGSRQIYLTFPAESSFTEHDVSIYFT-SYGHVEDVRI 360

Query: 361 PCQQRRMFGFVTFHSVETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQ 420
           PCQQ+RM+GFVTF S ETVK IL++ + H IC ARVLVKPYREKS+              
Sbjct: 361 PCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLVKPYREKSR-------------- 420

Query: 421 QQAYFSSHYNSLEPEQLHSNY---DSASTMLRLRIEEQQRQQEQHALEVERSFTEMTLMP 480
             + +  +Y  L   +  S +   D     L  R+ E  R ++    E E+S ++     
Sbjct: 421 -SSRYLDNYKPLHGMRYGSKFIERDIEMNTLPPRVSESSRMRKPFLSEPEQSVSK----- 480

Query: 481 KSATNCSYFSYQMKELRL---PVPEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPR 540
              TN SY  +   + +L      EE  +R+  ++   +           ++++     R
Sbjct: 481 SLPTNYSYLGFSSDDFKLTSNAEQEEQAERLSYLLDYLNTE--------DNVMNITTNYR 529

Query: 541 NTAAWNHPELNLDDSEGYNLPDSPFESGTG 546
           +     H E    DS+  NLP+SPF S +G
Sbjct: 541 DNDRRTHCESL--DSQVLNLPESPFSSLSG 529

[Close]

BLAST of CmoCh16G009840 vs. TAIR 10
Match: AT3G52980.1 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 300.4 bits (768), Expect = 2.9e-81
Identity = 176/389 (45.24%), Postives = 244/389 (62.72%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLL-HDHYDQEMARLALAPDHDIQQVVHLVKT 60
           M  +E   +V +RI +++PEN   II +LLL  D  D++M RLA  PD  ++ +++ VK 
Sbjct: 1   MNFTEAMNVVHNRIHQLEPENASKIIGYLLLMQDQNDRDMIRLAFCPDSVMRSMINCVKC 60

Query: 61  QL---------------------HLLALRSMPAPVSSPPPSP-SSGAFVPFAMRDSRTSL 120
           +L                      L    +    VS+ PPS  S G        D  +SL
Sbjct: 61  ELAKNSHYNNIPSSDHIQIRKFGSLSGSSNQSLLVSASPPSVLSMGTSFWENTNDMDSSL 120

Query: 121 YPDSMYELQKPAHFFCLDDHIEPPNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVEYQP 180
             +  Y       F   +D +  P   +S+     ++       S RT+R   ++ E+  
Sbjct: 121 KDNVQY-------FLDFEDSVTSPEFSTSFFSQKKQS------LSLRTSRRSLSLPEFPL 180

Query: 181 RICHYYSKGNCKHGNSCRYLHSNQMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSR 240
           +ICHY++KG CKHGN+C   H+N            +++HV  PGSLE+LE EI+ELL+SR
Sbjct: 181 KICHYFNKGFCKHGNNC---HNNLS----------DEEHVVSPGSLEKLEREIIELLKSR 240

Query: 241 RGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHG 300
           RG+PISIA LPM+Y+EKYG+ LQAEGYLTESQRHGK+GFSLTKLL RLK++I++IDRPHG
Sbjct: 241 RGAPISIAFLPMMYHEKYGRSLQAEGYLTESQRHGKAGFSLTKLLARLKNTIRLIDRPHG 300

Query: 301 QHSVILAEDALKFIDHRKDKNDTSPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVE 360
           QHSVILAED  KF+++  ++++    ++ +RQ+Y+TFPA+SSFTE DVS+YFS   G VE
Sbjct: 301 QHSVILAEDVSKFVEYTGERSEHGAILAGSRQVYLTFPAESSFTEHDVSNYFS-EVGPVE 360

Query: 361 DVRIPCQQRRMFGFVTFHSVETVKLILSE 367
           DVRIPCQQ+RM+GFVTF  +ETVK IL++
Sbjct: 361 DVRIPCQQKRMYGFVTFVYMETVKRILAK 362

[Close]

BLAST of CmoCh16G009840 vs. TAIR 10
Match: AT3G51950.1 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-34
Identity = 166/564 (29.43%), Postives = 243/564 (43.09%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60
           M+  E  +IV  RI  +DPEN   I+  LLL DH ++EM RLA  P+  +  V+   K +
Sbjct: 1   MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60

Query: 61  LHLLALRSMPAPVSSPPPSPSSG-------AFVPFAMRDSRTSLYPDSMYELQKPAHFFC 120
           L L+     P        SP +        A +PF     R+S    + +EL        
Sbjct: 61  LGLMNCSRSPWSHQDELISPKNNRGSSLNPASLPFYANGGRSSRDLTNDFEL-------- 120

Query: 121 LDDHIEPPNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVE-----------YQPRICHY 180
           +DD                 N+   +   S  AR  S V++           +    C Y
Sbjct: 121 MDD----------------MNSRSTDFLGSVHARSGSCVLDGLGYGGDSDLGFGGVPCSY 180

Query: 181 YSKGNCKHGNSCRYLHSNQMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPI 240
           +++G CK+G SCR++HS              D      GS  R     +ELLRS    P 
Sbjct: 181 FARGFCKNGASCRFVHS--------------DGGADLVGSPSR-----IELLRSNSVPP- 240

Query: 241 SIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVI 300
                             A  ++T S        SL    T+   ++Q  D      +++
Sbjct: 241 ----------------RLAHHFMTRS--------SLPSFSTK-GVNLQQNDVQRAAAALM 300

Query: 301 LAEDALKFIDHRKDKNDTSPNVSSA-RQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRI 360
           + ++  K    R ++ D S     A RQIY+TFPADS F E+DVS+YFS  +G V+DVRI
Sbjct: 301 IGDELQKLGRWRPERIDLSAMACPASRQIYLTFPADSRFREEDVSNYFST-FGPVQDVRI 360

Query: 361 PCQQRRMFGFVTFHSVETVKLILSEDSEHLICGARVLVKPYREKSKLLE--RKNQDRIEQ 420
           P QQ+RMFGFVTF   ETVK IL++ + H +C +RVLVKPY+EK K+ +  R NQ    +
Sbjct: 361 PYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTERE 420

Query: 421 QQQQAYFSSHYNSLEPEQLHSNYDSASTMLRLRIEEQQRQ-QEQHALEVERSFTEMTLMP 480
                  SS  + L     ++N  +   + R + EE+  + Q +  + ++    +     
Sbjct: 421 LSPTGLDSSPRDVLGGRGFYNN--TQDVLWRSKFEEEILELQSRRLMNLQLLDVKKHFQL 473

Query: 481 KSATNCSYFSYQMKELRLPVPEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNTA 540
            S TN    +   + L  P P      +  I + + G   G  S      D+        
Sbjct: 481 NSPTNIHSPNPFSQSLISPRP------LSVIKREYDGGEKGKGSSKEGSDDD-------- 473

Query: 541 AWNHPELNLDDSEGYNLPDSPFES 543
             N PE  L+DS    LPDSPF S
Sbjct: 541 TMNLPE-RLEDS----LPDSPFAS 473

[Close]

BLAST of CmoCh16G009840 vs. TAIR 10
Match: AT3G51950.2 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-34
Identity = 166/564 (29.43%), Postives = 243/564 (43.09%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60
           M+  E  +IV  RI  +DPEN   I+  LLL DH ++EM RLA  P+  +  V+   K +
Sbjct: 1   MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60

Query: 61  LHLLALRSMPAPVSSPPPSPSSG-------AFVPFAMRDSRTSLYPDSMYELQKPAHFFC 120
           L L+     P        SP +        A +PF     R+S    + +EL        
Sbjct: 61  LGLMNCSRSPWSHQDELISPKNNRGSSLNPASLPFYANGGRSSRDLTNDFEL-------- 120

Query: 121 LDDHIEPPNGLSSYDCSYVENAAMVNKFSSRTARHHSTVVE-----------YQPRICHY 180
           +DD                 N+   +   S  AR  S V++           +    C Y
Sbjct: 121 MDD----------------MNSRSTDFLGSVHARSGSCVLDGLGYGGDSDLGFGGVPCSY 180

Query: 181 YSKGNCKHGNSCRYLHSNQMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLRSRRGSPI 240
           +++G CK+G SCR++HS              D      GS  R     +ELLRS    P 
Sbjct: 181 FARGFCKNGASCRFVHS--------------DGGADLVGSPSR-----IELLRSNSVPP- 240

Query: 241 SIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVI 300
                             A  ++T S        SL    T+   ++Q  D      +++
Sbjct: 241 ----------------RLAHHFMTRS--------SLPSFSTK-GVNLQQNDVQRAAAALM 300

Query: 301 LAEDALKFIDHRKDKNDTSPNVSSA-RQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRI 360
           + ++  K    R ++ D S     A RQIY+TFPADS F E+DVS+YFS  +G V+DVRI
Sbjct: 301 IGDELQKLGRWRPERIDLSAMACPASRQIYLTFPADSRFREEDVSNYFST-FGPVQDVRI 360

Query: 361 PCQQRRMFGFVTFHSVETVKLILSEDSEHLICGARVLVKPYREKSKLLE--RKNQDRIEQ 420
           P QQ+RMFGFVTF   ETVK IL++ + H +C +RVLVKPY+EK K+ +  R NQ    +
Sbjct: 361 PYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTERE 420

Query: 421 QQQQAYFSSHYNSLEPEQLHSNYDSASTMLRLRIEEQQRQ-QEQHALEVERSFTEMTLMP 480
                  SS  + L     ++N  +   + R + EE+  + Q +  + ++    +     
Sbjct: 421 LSPTGLDSSPRDVLGGRGFYNN--TQDVLWRSKFEEEILELQSRRLMNLQLLDVKKHFQL 473

Query: 481 KSATNCSYFSYQMKELRLPVPEESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPRNTA 540
            S TN    +   + L  P P      +  I + + G   G  S      D+        
Sbjct: 481 NSPTNIHSPNPFSQSLISPRP------LSVIKREYDGGEKGKGSSKEGSDDD-------- 473

Query: 541 AWNHPELNLDDSEGYNLPDSPFES 543
             N PE  L+DS    LPDSPF S
Sbjct: 541 TMNLPE-RLEDS----LPDSPFAS 473

[Close]

BLAST of CmoCh16G009840 vs. TAIR 10
Match: AT5G12440.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-33
Identity = 156/599 (26.04%), Postives = 260/599 (43.41%), Query Frame = 0


Query: 1   MELSEYRKIVFHRISKIDPENVENIICFLLLHDHYDQEMARLALAPDHDIQQVVHLVKTQ 60
           M+  +   ++  +I  ++P+    II +LLLHD  D+++  LA  P+  +Q  +  VK+ 
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 61  LHLLALRSMPAPVSSPPP-------------SPSSGAFVPFAMRDSRTSLYPDSMYELQK 120
           L + +  S  +  +SP P             S  S  F+ F  R+S +S    S +    
Sbjct: 61  LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGSSHSNGFMDF-RRNSPSSPSSTSPWSFNN 120

Query: 121 PAHFFCL------DDHIEP-------------PNGLSSYDCSYVENA------------- 180
                C+      + HI P              NGLS+      + A             
Sbjct: 121 -----CINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLND 180

Query: 181 --AMVNKFSSRTAR--HHSTVVEYQP------------------------------RICH 240
             + ++   S+T      S  ++Y                                + C 
Sbjct: 181 CLSFLDDSCSKTEDLVDPSIPLDYSVDGDGETHLHRRSFSCDASFVSGDDGFGGGCKPCV 240

Query: 241 YYSKGNCKHGNSCRYLHSNQMPGSFSQMYNVNDDHVFRPGSLERLEFEIVELLR------ 300
           Y+S+G CK+G SC+++H     G +    + N      P  +E    +  E++R      
Sbjct: 241 YFSRGLCKNGESCKFIH-----GGYPDNMDGNGIVADSPRKMENFVRQHEEMMRLKLAYQ 300

Query: 301 SRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRP 360
            +R +   +   P + YEK    L  +     +QR G   F   +  +     +      
Sbjct: 301 QQRLASQILGRAPQLPYEKRMDFLLQQ----HAQRDGGLPFGDERFWSSSPGRL------ 360

Query: 361 HGQHSVILAEDALKFIDHRKDKNDTSPNVSSARQIYMTFPADSSFTEDDVSDYFSIHYGL 420
                     + ++   H  D+++     S++RQIY+TFPADS+F ++DV+ YFS+ +G 
Sbjct: 361 ----------ERMELAMHLGDQSN-----SASRQIYLTFPADSTFKDEDVATYFSL-FGT 420

Query: 421 VEDVRIPCQQRRMFGFVTFHSVETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQD 480
           V+DVRIP QQ+RMFGFV+F   ETVK++L+  + H IC +RVLVKPY+EK K+L++K Q 
Sbjct: 421 VQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQ 480

Query: 481 RIEQQQQQAYFS--SHYNSLEPEQLHSNYDSASTMLRLRIEEQQRQQEQ----HALEVER 507
            ++QQ ++  +S  S  + ++P +  S++   S ML  R E  +R+ EQ     A+E+ER
Sbjct: 481 LLQQQIERGNYSPCSSPSGIDPRE-QSDFHLGSKMLYERREMMRRKIEQADLLRAIELER 540

The following BLAST results are available for this feature:

BLAST of CmoCh16G009840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ41	1.1e-96	40.88	Zinc finger CCCH domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6ZK57	7.1e-77	35.15	Zinc finger CCCH domain-containing protein 54 OS=Oryza sativa subsp. japonica OX...	[more]
Q84ZT0	7.0e-48	46.37	Putative zinc finger CCCH domain-containing protein 51 OS=Oryza sativa subsp. ja...	[more]
Q0D3J9	1.4e-35	27.60	Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica OX...	[more]
Q10LZ9	4.0e-35	28.22	Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of CmoCh16G009840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWX1	0.0e+00	100.00	zinc finger CCCH domain-containing protein 18-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1L8K9	2.9e-291	93.44	zinc finger CCCH domain-containing protein 18-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A0A0L4W6	2.8e-201	68.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061520 PE=4 SV=1	[more]
A0A6J1F359	1.8e-192	63.71	zinc finger CCCH domain-containing protein 18-like isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1KX51	9.1e-192	63.05	zinc finger CCCH domain-containing protein 18-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of CmoCh16G009840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932409.1	0.0e+00	100.00	zinc finger CCCH domain-containing protein 18-like [Cucurbita moschata]	[more]
KAG6577504.1	0.0e+00	92.55	Zinc finger CCCH domain-containing protein 18, partial [Cucurbita argyrosperma s...	[more]
KAG7015561.1	0.0e+00	94.47	Zinc finger CCCH domain-containing protein 18 [Cucurbita argyrosperma subsp. arg...	[more]
XP_023553335.1	1.4e-295	93.68	zinc finger CCCH domain-containing protein 18-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007773.1	6.0e-291	93.44	zinc finger CCCH domain-containing protein 18-like [Cucurbita maxima]	[more]

BLAST of CmoCh16G009840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G05160.1	7.5e-98	40.88	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]
AT3G52980.1	2.9e-81	45.24	Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ...	[more]
AT3G51950.1	1.2e-34	29.43	Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ...	[more]
AT3G51950.2	1.2e-34	29.43	Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ...	[more]
AT5G12440.1	1.0e-33	26.04	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 154..180 e-value: 4.2E-4 score: 29.6
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 155..179 e-value: 1.9E-5 score: 24.5
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 154..181 score: 15.694446
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 309..380 e-value: 7.5E-7 score: 38.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 319..365 e-value: 5.6E-6 score: 26.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 308..384 score: 9.780305
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 315..382 e-value: 2.5E-9 score: 39.3
IPR025605	OST-HTH/LOTUS domain	PFAM	PF12872	OST-HTH	coord: 202..281 e-value: 8.9E-11 score: 41.5
IPR025605	OST-HTH/LOTUS domain	PROSITE	PS51644	HTH_OST	coord: 202..285 score: 10.909037
None	No IPR available	GENE3D	4.10.1000.10		coord: 150..234 e-value: 1.5E-6 score: 29.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 494..549
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 494..512
None	No IPR available	PANTHER	PTHR24009:SF23	TRANSCRIPTION FACTOR C3H FAMILY-RELATED	coord: 1..78
None	No IPR available	PANTHER	PTHR24009:SF23	TRANSCRIPTION FACTOR C3H FAMILY-RELATED	coord: 95..542
None	No IPR available	PANTHER	PTHR24009	RNA-BINDING (RRM/RBD/RNP MOTIFS)	coord: 95..542
None	No IPR available	PANTHER	PTHR24009	RNA-BINDING (RRM/RBD/RNP MOTIFS)	coord: 1..78
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 155..179
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 319..405

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G009840.1	CmoCh16G009840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding