CmoCh16G009800 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G009800
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	heterogeneous nuclear ribonucleoprotein 1-like
Location	Cmo_Chr16: 6691881 .. 6694651 (-)
RNA-Seq Expression	CmoCh16G009800
Synteny	CmoCh16G009800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTTTTCTCTTTCTGTTTGTGTTTGAAGGATTGATGTAAGGATGAAATTCCATATGTTTTGATTTATTTAAGGGAAGTGGTAATACCAAACACCAAAAGCTAAAGGAAAAGGAGAGAGAGAGAGAGAAGAGGGGATGGGCGCATCCTCTGTTTTCCTTCCCTAACCATTATTCCTCCTCCTTCCTCTTAGATCTTACTTTCCCATCACTATTTCACTGCAACCGTGAAATCCCATCTCTATTTTCCTTCATTCTCCCTTTTCTTCTTCTGGGATTTCATTGTTTTCCGCTTATTTTGCGTTTCCGATTCTTCTACGACCTTTCCTCCTTCTTCCCTTCATTACGAAGCATCGGATGTTTCACCATTCAATCTGTTCTTTGTTTTTAGCCTGTCCGATTCTATCTCAATTTTCGGTTAATAATCGCCCCCTTTTGTTTCTTCTTACCTCAATCCACATTTTCCTCCCAACTAGATTGGATTGTGTTTTTCTAGTTCAGATTTCGGATTTGGGATCGAGTTGTGTATGCTTCGAATTGAACGATTCTTTTTAGTTTTGATTTTGATTTTGATTTGGGTGTTTTGCGATGTCTTGTAAATCGAAATTCATTGAATGATTCATTGTTTGGTAATAGAAAAGATGGAATCAGATCTTGGCAAACTCTTTATTGGCGGAATTTCTTGGGATACTGATGAAGAACGTCTTAGGGATTATTTTGGAAACTATGGCGAAGTGGTTGAAGCTGTGATCATGAGAGATCGCACCACCGGTCGTGCTCGTGGCTTTGGCTTTGTTGTCTTTGCAGATCCTGTTGTTGCTGAGAGAGTCATTTTGGAGAAGCATATCATCGATGGCCGCACTGTGAGATTTTCTTCTTACCTCCGATCATACATTTTTTTAACGTTTGATTCCTGTTCTTGGCAATTCTGTATAAATTTAGATGTGATGTGTTCTGTGGATGCAATTTGTAGGATTAGAATATGTGAAATTGGAGTTGTGTTCTTGTTAAATGTGGCTTTTCAATTATTAGGTTGAAGCTAAAAAGGCTGTTCCAAAGGATGATCAGAACATGTTGAATAGAAACATTGGTAGTAGCATTCAAGGTTCTCCTAGCTCGGGACGAACGAAAAAGATTTTCGTTGGAGGTTTAGCTTCAACAGTCACAGAGGCAGACTTTCAGAAGTACTTTGATCAGTTTGGCACAATCACTGATGTTGTTGTTATGTATGATCACAGCACACAAAGGCCGAGAGGTTTTGGGTTCATTACGTACGACTCGGAGGAGGTCGTCGACCGTGTGCTGCATAAAACCTTTCATGAACTCAATGGAAAAATGGTTGAGGTTAAAAGAGCAATCCCAAAAGAGCAAACCCCAGGGCCTAACCGGAGCCCTCTTGTAGGATATAACTTTGGTATGAGTAGAGCTAGTGGATTTCTTAACAACTATACTCAAGGCTATAATATGAGTCCTCTCAGAGGTATCGGAATCCGGTCCGATGGTAGGTTGAGTCCATTTCTTAGCCCTCGAACCGGGGTTCCTCCTTTAGGTTTGAATTTTGAGCAAGGGCTGAGGCAAGGCTATGGTAGGACTATGAACATTATGAATAGTCAAGCACAGGAACAAATGTTGAGTTCCTATTATAATGGAAATTCGAATAGGTACATTGCCCCGATTGGCTATAGCGGAGGCAATGGACGAGGCGATTCTCCGTTAAGCTCGAGTACGTGGAATGTCTGGGGAAATGGAAGTATGAGCACTGCTTCCATGAACTCTTCTGCCTCTGGAATGGGTAACTTCAGAGTGGCATATGGAAATAACGATGATAATTGGAATTTTCCTGCTGTTTCTAATCATGTTGGAGGAGGGAATGTTCCTGATAATGGATATGCAGTTCGAGACAATGGCGTCGGGTTCAGAGGAGACTATGGAGGAAATGTAGTCTCGAACGCAACCCAAAAACCATTTGCTGAAACAACCAATGGTTTCGAGAGGTCATACAGGGAATTATATCGTGATCAAGTCGTGCACGATGATGTAACTTGGCAGTCTACCGCTCCTGAACTCGATGATTCTATGGCTTTTGGTTATGGTCTTGGTAACCTCGCTTCAGACGATCCAACCAAAACTTCAGAGAGTTCTGTAGCAAATTACGACATTTCGAGCAGACAATCAACTAGAGGTAAACACACCCTTTGCTTTATTTTATTTATAGTCACGTTTTCGTTATAGCGTCTCGACTTGCGACTCTGAATTTAGCTGAAAATAGAACCATTTGGCATTTGATTATTGTTGTGAATAGGAATTGCTGCGTAGAAGAAGATAAATTGAAAATATAGTTGCAATGAATGAAACATGATACGAAGAAGGATTTGGATTCGGATTCGTAATTTTCATACCGCTCGTTGAGTTGATGAGCTAAAAAGGGAACACTGATCTGATAAACACACACTCTAGACTCGGTTCCTCGATGGAAAACATAAACATAGATTTGGAAAGAAGAAAGGAGACAGACGAGACGACGACGACAACAGAAATCGAGCACTGTAATTTTTCGTTTGCATTTGCGTTTTTTTCGTTAGCAAGACGTAGAGTGGCGTTGTTGGGATTGATTGAGGTGTAATAGAGTGATGTTTTGAGTAAACAGATCATTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGGTATAAGAACACAGATGATGATGAACAAGTTGTTCGAGTTTGTTGTGTTGGGGAATTCATTTCAGATCTCTTTATCTATTTTGTATGGCCA

mRNA sequence

TCTCTTTTCTCTTTCTGTTTGTGTTTGAAGGATTGATGTAAGGATGAAATTCCATATGTTTTGATTTATTTAAGGGAAGTGGTAATACCAAACACCAAAAGCTAAAGGAAAAGGAGAGAGAGAGAGAGAAGAGGGGATGGGCGCATCCTCTGTTTTCCTTCCCTAACCATTATTCCTCCTCCTTCCTCTTAGATCTTACTTTCCCATCACTATTTCACTGCAACCGTGAAATCCCATCTCTATTTTCCTTCATTCTCCCTTTTCTTCTTCTGGGATTTCATTGTTTTCCGCTTATTTTGCGTTTCCGATTCTTCTACGACCTTTCCTCCTTCTTCCCTTCATTACGAAGCATCGGATGTTTCACCATTCAATCTGTTCTTTGTTTTTAGCCTGTCCGATTCTATCTCAATTTTCGGTTAATAATCGCCCCCTTTTGTTTCTTCTTACCTCAATCCACATTTTCCTCCCAACTAGATTGGATTGTGTTTTTCTAGTTCAGATTTCGGATTTGGGATCGAGTTGTAAAAGATGGAATCAGATCTTGGCAAACTCTTTATTGGCGGAATTTCTTGGGATACTGATGAAGAACGTCTTAGGGATTATTTTGGAAACTATGGCGAAGTGGTTGAAGCTGTGATCATGAGAGATCGCACCACCGGTCGTGCTCGTGGCTTTGGCTTTGTTGTCTTTGCAGATCCTGTTGTTGCTGAGAGAGTCATTTTGGAGAAGCATATCATCGATGGCCGCACTGTTGAAGCTAAAAAGGCTGTTCCAAAGGATGATCAGAACATGTTGAATAGAAACATTGGTAGTAGCATTCAAGGTTCTCCTAGCTCGGGACGAACGAAAAAGATTTTCGTTGGAGGTTTAGCTTCAACAGTCACAGAGGCAGACTTTCAGAAGTACTTTGATCAGTTTGGCACAATCACTGATGTTGTTGTTATGTATGATCACAGCACACAAAGGCCGAGAGGTTTTGGGTTCATTACGTACGACTCGGAGGAGGTCGTCGACCGTGTGCTGCATAAAACCTTTCATGAACTCAATGGAAAAATGGTTGAGGTTAAAAGAGCAATCCCAAAAGAGCAAACCCCAGGGCCTAACCGGAGCCCTCTTGTAGGATATAACTTTGGTATGAGTAGAGCTAGTGGATTTCTTAACAACTATACTCAAGGCTATAATATGAGTCCTCTCAGAGGTATCGGAATCCGGTCCGATGGTAGGTTGAGTCCATTTCTTAGCCCTCGAACCGGGGTTCCTCCTTTAGGTTTGAATTTTGAGCAAGGGCTGAGGCAAGGCTATGGTAGGACTATGAACATTATGAATAGTCAAGCACAGGAACAAATGTTGAGTTCCTATTATAATGGAAATTCGAATAGGTACATTGCCCCGATTGGCTATAGCGGAGGCAATGGACGAGGCGATTCTCCGTTAAGCTCGAGTACGTGGAATGTCTGGGGAAATGGAAGTATGAGCACTGCTTCCATGAACTCTTCTGCCTCTGGAATGGGTAACTTCAGAGTGGCATATGGAAATAACGATGATAATTGGAATTTTCCTGCTGTTTCTAATCATGTTGGAGGAGGGAATGTTCCTGATAATGGATATGCAGTTCGAGACAATGGCGTCGGGTTCAGAGGAGACTATGGAGGAAATGTAGTCTCGAACGCAACCCAAAAACCATTTGCTGAAACAACCAATGGTTTCGAGAGGTCATACAGGGAATTATATCGTGATCAAGTCGTGCACGATGATGTAACTTGGCAGTCTACCGCTCCTGAACTCGATGATTCTATGGCTTTTGGTTATGGTCTTGGTAACCTCGCTTCAGACGATCCAACCAAAACTTCAGAGAGTTCTGTAGCAAATTACGACATTTCGAGCAGACAATCAACTAGAGGAATTGCTGCGTAGAAGAAGATAAATTGAAAATATAGTTGCAATGAATGAAACATGATACGAAGAAGGATTTGGATTCGGATTCGTAATTTTCATACCGCTCGTTGAGTTGATGAGCTAAAAAGGGAACACTGATCTGATAAACACACACTCTAGACTCGGTTCCTCGATGGAAAACATAAACATAGATTTGGAAAGAAGAAAGGAGACAGACGAGACGACGACGACAACAGAAATCGAGCACTGTAATTTTTCGTTTGCATTTGCGTTTTTTTCGTTAGCAAGACGTAGAGTGGCGTTGTTGGGATTGATTGAGGTGTAATAGAGTGATGTTTTGAGTAAACAGATCATTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGGTATAAGAACACAGATGATGATGAACAAGTTGTTCGAGTTTGTTGTGTTGGGGAATTCATTTCAGATCTCTTTATCTATTTTGTATGGCCA

Coding sequence (CDS)

ATGGAATCAGATCTTGGCAAACTCTTTATTGGCGGAATTTCTTGGGATACTGATGAAGAACGTCTTAGGGATTATTTTGGAAACTATGGCGAAGTGGTTGAAGCTGTGATCATGAGAGATCGCACCACCGGTCGTGCTCGTGGCTTTGGCTTTGTTGTCTTTGCAGATCCTGTTGTTGCTGAGAGAGTCATTTTGGAGAAGCATATCATCGATGGCCGCACTGTTGAAGCTAAAAAGGCTGTTCCAAAGGATGATCAGAACATGTTGAATAGAAACATTGGTAGTAGCATTCAAGGTTCTCCTAGCTCGGGACGAACGAAAAAGATTTTCGTTGGAGGTTTAGCTTCAACAGTCACAGAGGCAGACTTTCAGAAGTACTTTGATCAGTTTGGCACAATCACTGATGTTGTTGTTATGTATGATCACAGCACACAAAGGCCGAGAGGTTTTGGGTTCATTACGTACGACTCGGAGGAGGTCGTCGACCGTGTGCTGCATAAAACCTTTCATGAACTCAATGGAAAAATGGTTGAGGTTAAAAGAGCAATCCCAAAAGAGCAAACCCCAGGGCCTAACCGGAGCCCTCTTGTAGGATATAACTTTGGTATGAGTAGAGCTAGTGGATTTCTTAACAACTATACTCAAGGCTATAATATGAGTCCTCTCAGAGGTATCGGAATCCGGTCCGATGGTAGGTTGAGTCCATTTCTTAGCCCTCGAACCGGGGTTCCTCCTTTAGGTTTGAATTTTGAGCAAGGGCTGAGGCAAGGCTATGGTAGGACTATGAACATTATGAATAGTCAAGCACAGGAACAAATGTTGAGTTCCTATTATAATGGAAATTCGAATAGGTACATTGCCCCGATTGGCTATAGCGGAGGCAATGGACGAGGCGATTCTCCGTTAAGCTCGAGTACGTGGAATGTCTGGGGAAATGGAAGTATGAGCACTGCTTCCATGAACTCTTCTGCCTCTGGAATGGGTAACTTCAGAGTGGCATATGGAAATAACGATGATAATTGGAATTTTCCTGCTGTTTCTAATCATGTTGGAGGAGGGAATGTTCCTGATAATGGATATGCAGTTCGAGACAATGGCGTCGGGTTCAGAGGAGACTATGGAGGAAATGTAGTCTCGAACGCAACCCAAAAACCATTTGCTGAAACAACCAATGGTTTCGAGAGGTCATACAGGGAATTATATCGTGATCAAGTCGTGCACGATGATGTAACTTGGCAGTCTACCGCTCCTGAACTCGATGATTCTATGGCTTTTGGTTATGGTCTTGGTAACCTCGCTTCAGACGATCCAACCAAAACTTCAGAGAGTTCTGTAGCAAATTACGACATTTCGAGCAGACAATCAACTAGAGGAATTGCTGCGTAG

Protein sequence

MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVAERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVKRAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPRTGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDSPLSSSTWNVWGNGSMSTASMNSSASGMGNFRVAYGNNDDNWNFPAVSNHVGGGNVPDNGYAVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELDDSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGIAA

Homology

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BLAST of CmoCh16G009800 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.4e-63
Identity = 156/390 (40.00%), Postives = 214/390 (54.87%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           M+SD GKLF+GGISW+TDE++LR++F NYGEV +A++MRD+ TGR RGFGFV+F+DP V 
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNR--NIGSS-IQGSPSSGRTKKIFVGGLAST 120
           +RV+ EKH ID R V+ K+A+ +++Q +  R  N+ +S   G  +  +TKKIFVGGL  T
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPT 120

Query: 121 VTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMV 180
           +T+ +F++YF+ +G +TDV +MYD +T RPRGFGF+++DSE+ VD VLHKTFH+L+GK V
Sbjct: 121 LTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQV 180

Query: 181 EVKRAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFL 240
           EVKRA+PK+  PG           G S   G    Y QGY  +     G     R     
Sbjct: 181 EVKRALPKDANPGGG---------GRSMGGGGSGGY-QGYGGNESSYDGRMDSNRFLQHQ 240

Query: 241 SPRTGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGR 300
           S   G+P  G     G   GYG   N                     Y    G +GG G 
Sbjct: 241 SVGNGLPSYG---SSGYGAGYGNGSN---------------GAGYGAYGGYTGSAGGYGA 300

Query: 301 GDSPLSSSTWNVWGNG---SMSTASMNS----SASGMGNFRVAYGNNDDNWNFPAVSNHV 360
           G +    +T N+ G G   S   A  NS    ++SG GN     G     +  P  +   
Sbjct: 301 GATAGYGAT-NIPGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPT 360

Query: 361 GGGNVPDN------GYAVRDNGVGFRGDYG 375
              +   N      GY+  D+G G +  YG
Sbjct: 361 QSPSGYSNQGYGYGGYSGSDSGYGNQAAYG 361

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BLAST of CmoCh16G009800 vs. ExPASy Swiss-Prot
Match: Q9JII5 (DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 1.3e-47
Identity = 112/278 (40.29%), Postives = 154/278 (55.40%), Query Frame = 0


Query: 4   DLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVAERV 63
           ++GKLF+GG+ W T +E LR YF  YGEVV+ VIM+D+TT ++RGFGFV F DP     V
Sbjct: 8   EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67

Query: 64  ILEK-HIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPS-SGRTKKIFVGGLASTVTEA 123
           +  + H +DGR ++ K   P+  Q    R      +G  S S ++ KIFVGG+     E 
Sbjct: 68  LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGET 127

Query: 124 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVKR 183
           + ++YF +FG +T+VV++YD   QRPRGFGFIT++ E+ VD+ ++  FH++ GK VEVKR
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187

Query: 184 AIP---KEQTPGPNRSPLVGYNFGMSRASGFLN----NYTQGYNM--------SPLRGIG 243
           A P   K Q PG   +   G     S A+G+       + QGY            + G G
Sbjct: 188 AEPRDSKNQAPGQPGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYG 247

Query: 244 IRSDGRLS-----PFLSPRTGVPPLGLNFEQGLRQGYG 260
               GR +     PF S     PP G    QG  QGYG
Sbjct: 248 PPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYG 285

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BLAST of CmoCh16G009800 vs. ExPASy Swiss-Prot
Match: Q98SJ2 (DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.9e-47
Identity = 103/250 (41.20%), Postives = 149/250 (59.60%), Query Frame = 0


Query: 4   DLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVAERV 63
           ++GKLF+GG+ W T +E LR YF  YGEVV+ VIM+D+TT ++RGFGFV F DP     V
Sbjct: 8   EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67

Query: 64  ILEK-HIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSP--SSGRTKKIFVGGLASTVTE 123
           +  + H +DGR ++ K   P+  Q   +R      Q  P   + R+ KIFVGG+     E
Sbjct: 68  LASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGE 127

Query: 124 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 183
            + ++YF++FG +T+VV++YD   QRPRGFGFIT++ E+ VD+ ++  FH++ GK VEVK
Sbjct: 128 TELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 187

Query: 184 RAIP---KEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFL 243
           RA P   K QTPGP  S   G     S A+G+     Q +     +G+ + +   +  + 
Sbjct: 188 RAEPRDSKSQTPGPPGSNQWGSRAMQSTANGWTGQPPQTWQGYSPQGMWMPTGQTIGGYG 247

Query: 244 SP--RTGVPP 246
            P  R G PP
Sbjct: 248 QPAGRGGPPP 257

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BLAST of CmoCh16G009800 vs. ExPASy Swiss-Prot
Match: Q96EP5 (DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.4e-46
Identity = 110/278 (39.57%), Postives = 154/278 (55.40%), Query Frame = 0


Query: 4   DLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVAERV 63
           ++GKLF+GG+ W T +E LR YF  YGEVV+ VIM+D+TT ++RGFGFV F DP     V
Sbjct: 8   EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67

Query: 64  ILEK-HIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPS-SGRTKKIFVGGLASTVTEA 123
           +  + H +DGR ++ K   P+  Q    R      +G  S + ++ KIFVGG+     E 
Sbjct: 68  LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGET 127

Query: 124 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVKR 183
           + ++YF +FG +T+VV++YD   QRPRGFGFIT++ E+ VD+ ++  FH++ GK VEVKR
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187

Query: 184 AIP---KEQTPGPNRSPLVGYNFGMSRASGFLN----NYTQGYNM--------SPLRGIG 243
           A P   K Q PG   +   G     + A+G+       + QGY            + G G
Sbjct: 188 AEPRDSKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYG 247

Query: 244 IRSDGRLS-----PFLSPRTGVPPLGLNFEQGLRQGYG 260
               GR +     PF S     PP G    QG  QGYG
Sbjct: 248 PPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYG 285

[Close]

BLAST of CmoCh16G009800 vs. ExPASy Swiss-Prot
Match: Q9C652 (RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-45
Identity = 96/199 (48.24%), Postives = 131/199 (65.83%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           M+ D  KLF+GGI+ +T EE L+ YF  YG V+EAV+ +++ TG+ RGFGFV FA+    
Sbjct: 1   MDYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDV 60

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDD-------QNMLNRNI---GSSIQGSPSSG---RTK 120
            + + + H I G+ V+ +KA+ K +          L R +      ++   S+G   RTK
Sbjct: 61  VKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQFLERKVQQMNGGLREMSSNGVTSRTK 120

Query: 121 KIFVGGLASTVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHK 180
           KIFVGGL+S  TE +F+ YF++FG  TDVVVM+D  T RPRGFGF+TYDSE+ V+ V+  
Sbjct: 121 KIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQS 180

Query: 181 TFHELNGKMVEVKRAIPKE 187
            FHEL+ K VEVKRAIPKE
Sbjct: 181 NFHELSDKRVEVKRAIPKE 199

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BLAST of CmoCh16G009800 vs. ExPASy TrEMBL
Match: A0A6J1EWG7 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111438739 PE=4 SV=1)

HSP 1 Score: 924.5 bits (2388), Expect = 1.8e-265
Identity = 461/461 (100.00%), Postives = 461/461 (100.00%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA
Sbjct: 10  MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 69

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 120
           ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE
Sbjct: 70  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 129

Query: 121 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 180
           ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK
Sbjct: 130 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 189

Query: 181 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPR 240
           RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPR
Sbjct: 190 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPR 249

Query: 241 TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS 300
           TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS
Sbjct: 250 TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS 309

Query: 301 PLSSSTWNVWGNGSMSTASMNSSASGMGNFRVAYGNNDDNWNFPAVSNHVGGGNVPDNGY 360
           PLSSSTWNVWGNGSMSTASMNSSASGMGNFRVAYGNNDDNWNFPAVSNHVGGGNVPDNGY
Sbjct: 310 PLSSSTWNVWGNGSMSTASMNSSASGMGNFRVAYGNNDDNWNFPAVSNHVGGGNVPDNGY 369

Query: 361 AVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD 420
           AVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD
Sbjct: 370 AVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD 429

Query: 421 DSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGIAA 462
           DSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGIAA
Sbjct: 430 DSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGIAA 470

[Close]

BLAST of CmoCh16G009800 vs. ExPASy TrEMBL
Match: A0A6J1L601 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111500306 PE=4 SV=1)

HSP 1 Score: 897.5 bits (2318), Expect = 2.3e-257
Identity = 447/461 (96.96%), Postives = 454/461 (98.48%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA
Sbjct: 10  MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 69

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 120
           ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE
Sbjct: 70  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 129

Query: 121 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 180
           ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK
Sbjct: 130 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 189

Query: 181 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPR 240
           RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPL GIG+RSDGRLSPFLSPR
Sbjct: 190 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLGGIGMRSDGRLSPFLSPR 249

Query: 241 TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS 300
           TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS
Sbjct: 250 TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS 309

Query: 301 PLSSSTWNVWGNGSMSTASMNSSASGMGNFRVAYGNNDDNWNFPAVSNHVGGGNVPDNGY 360
           PL+SSTWNVWGNGSMSTAS+NSS SGMGNFRVAYGNNDDNWN PAVSNHVGG NVPDNGY
Sbjct: 310 PLNSSTWNVWGNGSMSTASVNSSVSGMGNFRVAYGNNDDNWNLPAVSNHVGGENVPDNGY 369

Query: 361 AVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD 420
           AVRDNGVGFRG YGGNVVSNAT+K FAETTNGFERSYRELYRDQVVH+DVTWQST PELD
Sbjct: 370 AVRDNGVGFRGGYGGNVVSNATRKAFAETTNGFERSYRELYRDQVVHNDVTWQSTTPELD 429

Query: 421 DSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGIAA 462
           DSMAFGYGLGNLASDDPTK+SESS+ANYDISSRQSTRGIAA
Sbjct: 430 DSMAFGYGLGNLASDDPTKSSESSLANYDISSRQSTRGIAA 470

[Close]

BLAST of CmoCh16G009800 vs. ExPASy TrEMBL
Match: A0A5A7VHF8 (Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001770 PE=4 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 1.2e-218
Identity = 398/482 (82.57%), Postives = 425/482 (88.17%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           MESDLGKLFIGGISWDTDEERLR+YFG YGEVVEAVIMRDRTTGRARGFGFVVFADP VA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLREYFGQYGEVVEAVIMRDRTTGRARGFGFVVFADPGVA 60

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 120
           ERVIL+KH+IDGRTVEAKKAVPKDDQNMLNRN G SI GSP SGRTKKIFVGGLASTVTE
Sbjct: 61  ERVILDKHVIDGRTVEAKKAVPKDDQNMLNRNSG-SIHGSPGSGRTKKIFVGGLASTVTE 120

Query: 121 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 180
           ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEE VDRVLHKTFHELNGKMVEVK
Sbjct: 121 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVK 180

Query: 181 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPR 240
           RAIPKE TPGPNRSPLVGYN+GMSR SGFLN+YTQGYNMSPL G G+R DGRLSP +S R
Sbjct: 181 RAIPKELTPGPNRSPLVGYNYGMSRPSGFLNSYTQGYNMSPLGGYGVRPDGRLSPIISSR 240

Query: 241 TGVP-------PLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSG 300
           TGVP        +G+N EQG+RQGYGRT+N+MNSQAQEQML+SYYNGNSNRYIAPIGYSG
Sbjct: 241 TGVPHFGTANYGVGVNLEQGMRQGYGRTLNVMNSQAQEQMLNSYYNGNSNRYIAPIGYSG 300

Query: 301 GNGRGDSPLSSSTWNVWGNGSMSTASMNS-----SASGMGNFRVAYGNNDDNWNFPAVSN 360
           GNGRGDSPLSSSTWNVWGNGSMS A  +S     S SG GNFRVAYGNNDDNWN PAV+N
Sbjct: 301 GNGRGDSPLSSSTWNVWGNGSMSNAMSSSGPGTFSGSGTGNFRVAYGNNDDNWNSPAVAN 360

Query: 361 HVGGGNVP------DNGYAVRD-NGVGFRGDYGGN-VVSN-ATQKPFAETTNGFERSYRE 420
           HV G NVP      +NGYA+ D NG GFRG YG N VVSN A +K F ET NG+ERSYR+
Sbjct: 361 HV-GANVPGYTFGNNNGYAIGDNNGFGFRGGYGRNGVVSNVAARKAFVETNNGYERSYRD 420

Query: 421 LYRDQVVHDDVTWQSTAPELDDSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGI 462
           LYRD+VVHDD TWQSTAPELD S++FGYGLGNLASDDP K+SES +A+YD+SSRQSTRGI
Sbjct: 421 LYRDEVVHDDSTWQSTAPELDGSVSFGYGLGNLASDDPAKSSESFLASYDVSSRQSTRGI 480

[Close]

BLAST of CmoCh16G009800 vs. ExPASy TrEMBL
Match: A0A1S3BKM2 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103491055 PE=4 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 1.2e-218
Identity = 398/482 (82.57%), Postives = 425/482 (88.17%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           MESDLGKLFIGGISWDTDEERLR+YFG YGEVVEAVIMRDRTTGRARGFGFVVFADP VA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLREYFGQYGEVVEAVIMRDRTTGRARGFGFVVFADPGVA 60

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 120
           ERVIL+KH+IDGRTVEAKKAVPKDDQNMLNRN G SI GSP SGRTKKIFVGGLASTVTE
Sbjct: 61  ERVILDKHVIDGRTVEAKKAVPKDDQNMLNRNSG-SIHGSPGSGRTKKIFVGGLASTVTE 120

Query: 121 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 180
           ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEE VDRVLHKTFHELNGKMVEVK
Sbjct: 121 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVK 180

Query: 181 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPR 240
           RAIPKE TPGPNRSPLVGYN+GMSR SGFLN+YTQGYNMSPL G G+R DGRLSP +S R
Sbjct: 181 RAIPKELTPGPNRSPLVGYNYGMSRPSGFLNSYTQGYNMSPLGGYGVRPDGRLSPIISSR 240

Query: 241 TGVP-------PLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSG 300
           TGVP        +G+N EQG+RQGYGRT+N+MNSQAQEQML+SYYNGNSNRYIAPIGYSG
Sbjct: 241 TGVPHFGTANYGVGVNLEQGMRQGYGRTLNVMNSQAQEQMLNSYYNGNSNRYIAPIGYSG 300

Query: 301 GNGRGDSPLSSSTWNVWGNGSMSTASMNS-----SASGMGNFRVAYGNNDDNWNFPAVSN 360
           GNGRGDSPLSSSTWNVWGNGSMS A  +S     S SG GNFRVAYGNNDDNWN PAV+N
Sbjct: 301 GNGRGDSPLSSSTWNVWGNGSMSNAMSSSGPGTFSGSGTGNFRVAYGNNDDNWNSPAVAN 360

Query: 361 HVGGGNVP------DNGYAVRD-NGVGFRGDYGGN-VVSN-ATQKPFAETTNGFERSYRE 420
           HV G NVP      +NGYA+ D NG GFRG YG N VVSN A +K F ET NG+ERSYR+
Sbjct: 361 HV-GANVPGYTFGNNNGYAIGDNNGFGFRGGYGRNGVVSNVAARKAFVETNNGYERSYRD 420

Query: 421 LYRDQVVHDDVTWQSTAPELDDSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGI 462
           LYRD+VVHDD TWQSTAPELD S++FGYGLGNLASDDP K+SES +A+YD+SSRQSTRGI
Sbjct: 421 LYRDEVVHDDSTWQSTAPELDGSVSFGYGLGNLASDDPAKSSESFLASYDVSSRQSTRGI 480

[Close]

BLAST of CmoCh16G009800 vs. ExPASy TrEMBL
Match: A0A0A0L293 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G062570 PE=4 SV=1)

HSP 1 Score: 763.5 bits (1970), Expect = 5.2e-217
Identity = 396/482 (82.16%), Postives = 425/482 (88.17%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           MESDLGKLFIGGISWDTDEERLR+YFG+YGEVVEAVIMRDRTTGRARGFGFVVFADP VA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVA 60

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 120
           ERVIL+KH+IDGRTVEAKKAVPKDDQNMLNR+ G SI GSPSSGRTKKIFVGGLASTVTE
Sbjct: 61  ERVILDKHVIDGRTVEAKKAVPKDDQNMLNRSSG-SIHGSPSSGRTKKIFVGGLASTVTE 120

Query: 121 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 180
           ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEE VDRVLHKTFHELNGKMVEVK
Sbjct: 121 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVK 180

Query: 181 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPR 240
           RAIPKE TPGPNRSPLVGYN+GMSR SGFLN+YTQGYNMSPL G G+R DGRLSP +S R
Sbjct: 181 RAIPKELTPGPNRSPLVGYNYGMSRPSGFLNSYTQGYNMSPLGGYGVRPDGRLSPIISSR 240

Query: 241 TGVP-------PLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSG 300
           TGVP        +G+N EQG+RQGYGRT+NIMNSQAQEQML+SYYNGNSNRYIAPIGYSG
Sbjct: 241 TGVPHFGTANYGVGVNLEQGMRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYIAPIGYSG 300

Query: 301 GNGRGDSPLSSSTWNVWGNGSMSTASMNS-----SASGMGNFRVAYGNNDDNWNFPAVSN 360
           GNGRGDSPLSSSTWNVWGNGSMS A  +S     S SG GNFRVAYGNNDDNW+ PAV+N
Sbjct: 301 GNGRGDSPLSSSTWNVWGNGSMSNAMSSSGPGAFSGSGTGNFRVAYGNNDDNWSSPAVAN 360

Query: 361 HVGGGNVP------DNGYAVRD-NGVGFRGDYGGN-VVSN-ATQKPFAETTNGFERSYRE 420
           HV G NVP      +NGYA+ D NG GFRG YG N VVSN A +K F E  NG+ERSYR+
Sbjct: 361 HV-GANVPGYTFGNNNGYAIGDNNGFGFRGGYGRNGVVSNVAARKAFVEMNNGYERSYRD 420

Query: 421 LYRDQVVHDDVTWQSTAPELDDSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGI 462
           LYRD+ VHDD TWQSTAPELD S++FGYGLGNLASDDP K+SES +A+YD+SSRQSTRGI
Sbjct: 421 LYRDEAVHDDSTWQSTAPELDGSVSFGYGLGNLASDDPAKSSESFLASYDVSSRQSTRGI 480

[Close]

BLAST of CmoCh16G009800 vs. NCBI nr
Match: XP_022932367.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata])

HSP 1 Score: 924.5 bits (2388), Expect = 3.7e-265
Identity = 461/461 (100.00%), Postives = 461/461 (100.00%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA
Sbjct: 10  MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 69

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 120
           ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE
Sbjct: 70  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 129

Query: 121 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 180
           ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK
Sbjct: 130 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 189

Query: 181 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPR 240
           RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPR
Sbjct: 190 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPR 249

Query: 241 TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS 300
           TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS
Sbjct: 250 TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS 309

Query: 301 PLSSSTWNVWGNGSMSTASMNSSASGMGNFRVAYGNNDDNWNFPAVSNHVGGGNVPDNGY 360
           PLSSSTWNVWGNGSMSTASMNSSASGMGNFRVAYGNNDDNWNFPAVSNHVGGGNVPDNGY
Sbjct: 310 PLSSSTWNVWGNGSMSTASMNSSASGMGNFRVAYGNNDDNWNFPAVSNHVGGGNVPDNGY 369

Query: 361 AVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD 420
           AVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD
Sbjct: 370 AVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD 429

Query: 421 DSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGIAA 462
           DSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGIAA
Sbjct: 430 DSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGIAA 470

[Close]

BLAST of CmoCh16G009800 vs. NCBI nr
Match: KAG6577500.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 910.6 bits (2352), Expect = 5.5e-261
Identity = 453/461 (98.26%), Postives = 458/461 (99.35%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 120
           ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSS+QGSPSSGRTKKIFVGGLASTVTE
Sbjct: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSVQGSPSSGRTKKIFVGGLASTVTE 120

Query: 121 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 180
           ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK
Sbjct: 121 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 180

Query: 181 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPR 240
           RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPL GIGIRSDGRLSPFLSPR
Sbjct: 181 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLGGIGIRSDGRLSPFLSPR 240

Query: 241 TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS 300
           TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS
Sbjct: 241 TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS 300

Query: 301 PLSSSTWNVWGNGSMSTASMNSSASGMGNFRVAYGNNDDNWNFPAVSNHVGGGNVPDNGY 360
           PLSSSTWNVWGNGS+STASMNSSASGMGNFRVAYGNNDDNWN PAV+NHVG GNVPDNGY
Sbjct: 301 PLSSSTWNVWGNGSLSTASMNSSASGMGNFRVAYGNNDDNWNLPAVANHVGVGNVPDNGY 360

Query: 361 AVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD 420
           AVRDNGVGFRGDYGGNVVSNAT+KPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD
Sbjct: 361 AVRDNGVGFRGDYGGNVVSNATRKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD 420

Query: 421 DSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGIAA 462
           DSMAFGYGLGNLASDDPTKTSESS+ANYDISSRQSTRGIAA
Sbjct: 421 DSMAFGYGLGNLASDDPTKTSESSLANYDISSRQSTRGIAA 461

[Close]

BLAST of CmoCh16G009800 vs. NCBI nr
Match: KAG7015557.1 (Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 905.6 bits (2339), Expect = 1.8e-259
Identity = 450/461 (97.61%), Postives = 458/461 (99.35%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA
Sbjct: 10  MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 69

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 120
           ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSS+QGSPSSGRTKKIFVGGLASTVTE
Sbjct: 70  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSVQGSPSSGRTKKIFVGGLASTVTE 129

Query: 121 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 180
           ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK
Sbjct: 130 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 189

Query: 181 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPR 240
           RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPL GIGIRSDGRLSPFLSPR
Sbjct: 190 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLGGIGIRSDGRLSPFLSPR 249

Query: 241 TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS 300
           TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS
Sbjct: 250 TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS 309

Query: 301 PLSSSTWNVWGNGSMSTASMNSSASGMGNFRVAYGNNDDNWNFPAVSNHVGGGNVPDNGY 360
           PLSSSTWNVWGNGS+STASMNSSASGMGNFRVAYGNNDD+WN PAV+NHVG GNVPDNGY
Sbjct: 310 PLSSSTWNVWGNGSLSTASMNSSASGMGNFRVAYGNNDDSWNLPAVANHVGVGNVPDNGY 369

Query: 361 AVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD 420
           AVRDNGVGFRGDYGGNVVSNAT+KPFAETTNGFERSYRELYRDQVVHDDVTWQSTAP+L+
Sbjct: 370 AVRDNGVGFRGDYGGNVVSNATRKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPDLN 429

Query: 421 DSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGIAA 462
           DSMAFGYGLGNLASDDPTKTSESS+ANYDISSRQSTRGIAA
Sbjct: 430 DSMAFGYGLGNLASDDPTKTSESSLANYDISSRQSTRGIAA 470

[Close]

BLAST of CmoCh16G009800 vs. NCBI nr
Match: XP_023553352.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 901.7 bits (2329), Expect = 2.5e-258
Identity = 450/461 (97.61%), Postives = 455/461 (98.70%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA
Sbjct: 10  MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 69

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 120
           ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE
Sbjct: 70  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 129

Query: 121 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 180
           ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK
Sbjct: 130 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 189

Query: 181 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPR 240
           RAIPKEQTPGPNRSPLVGYNFGMSRA+GFLNNYTQGYNMSPL GIGIRSDGRLSPFLSPR
Sbjct: 190 RAIPKEQTPGPNRSPLVGYNFGMSRATGFLNNYTQGYNMSPLGGIGIRSDGRLSPFLSPR 249

Query: 241 TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS 300
           TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYN NSNRYIAPIGYSGGNGRGDS
Sbjct: 250 TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNANSNRYIAPIGYSGGNGRGDS 309

Query: 301 PLSSSTWNVWGNGSMSTASMNSSASGMGNFRVAYGNNDDNWNFPAVSNHVGGGNVPDNGY 360
           PLSSSTWNVWGNGS+STASMNSSASGMGNFRVAYGNNDDNWN PAV+NHVG GNVPDNGY
Sbjct: 310 PLSSSTWNVWGNGSISTASMNSSASGMGNFRVAYGNNDDNWNLPAVANHVGVGNVPDNGY 369

Query: 361 AVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD 420
           AVRDNGVGFRGDYGGNVVS AT+KPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD
Sbjct: 370 AVRDNGVGFRGDYGGNVVSIATRKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD 429

Query: 421 DSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGIAA 462
           DSMAFGYGLGNLASDDPTK SESS+ANYDISSRQSTRGIAA
Sbjct: 430 DSMAFGYGLGNLASDDPTKNSESSLANYDISSRQSTRGIAA 470

[Close]

BLAST of CmoCh16G009800 vs. NCBI nr
Match: XP_023007809.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima] >XP_023007810.1 heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima])

HSP 1 Score: 897.5 bits (2318), Expect = 4.8e-257
Identity = 447/461 (96.96%), Postives = 454/461 (98.48%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA
Sbjct: 10  MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 69

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 120
           ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE
Sbjct: 70  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFVGGLASTVTE 129

Query: 121 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 180
           ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK
Sbjct: 130 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEVK 189

Query: 181 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLSPR 240
           RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPL GIG+RSDGRLSPFLSPR
Sbjct: 190 RAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLGGIGMRSDGRLSPFLSPR 249

Query: 241 TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS 300
           TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS
Sbjct: 250 TGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYSGGNGRGDS 309

Query: 301 PLSSSTWNVWGNGSMSTASMNSSASGMGNFRVAYGNNDDNWNFPAVSNHVGGGNVPDNGY 360
           PL+SSTWNVWGNGSMSTAS+NSS SGMGNFRVAYGNNDDNWN PAVSNHVGG NVPDNGY
Sbjct: 310 PLNSSTWNVWGNGSMSTASVNSSVSGMGNFRVAYGNNDDNWNLPAVSNHVGGENVPDNGY 369

Query: 361 AVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQVVHDDVTWQSTAPELD 420
           AVRDNGVGFRG YGGNVVSNAT+K FAETTNGFERSYRELYRDQVVH+DVTWQST PELD
Sbjct: 370 AVRDNGVGFRGGYGGNVVSNATRKAFAETTNGFERSYRELYRDQVVHNDVTWQSTTPELD 429

Query: 421 DSMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRGIAA 462
           DSMAFGYGLGNLASDDPTK+SESS+ANYDISSRQSTRGIAA
Sbjct: 430 DSMAFGYGLGNLASDDPTKSSESSLANYDISSRQSTRGIAA 470

[Close]

BLAST of CmoCh16G009800 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 442.2 bits (1136), Expect = 5.1e-124
Identity = 256/494 (51.82%), Postives = 325/494 (65.79%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           M+SD GKLFIGGISWDT+EERL++YF ++GEV+EAVI++DRTTGRARGFGFVVFADP VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSS-GRTKKIFVGGLASTVT 120
           E VI EKH IDGR VEAKKAVP+DDQNM+NR+  SSIQGSP   GRT+KIFVGGL S+VT
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVT 120

Query: 121 EADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEV 180
           E+DF+ YF+QFGT TDVVVMYDH+TQRPRGFGFITYDSEE V++VL KTFHELNGKMVEV
Sbjct: 121 ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEV 180

Query: 181 KRAIPKEQTPGPNRSPL-VGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLS 240
           KRA+PKE +PGP+RSPL  GY++G++R +  LN Y QG+N + + G G+R DGR SP  +
Sbjct: 181 KRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGA 240

Query: 241 PRTGVP------PLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYS 300
            R+G         + +NF+QGL  G+    N   +    + +S YY GN+NR+   +GY 
Sbjct: 241 GRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFGPAVGYE 300

Query: 301 GGNGRGDSP-LSSSTWNVWGN-----------GSMSTASMNSSASGMGNFRVAYGNNDDN 360
           GGNG G+S   SS T N+WGN            S S   M  S+SG       +GN+  N
Sbjct: 301 GGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGVN 360

Query: 361 WNFP-----AVSNH---VGGGNVPDNGYAVRDNGVGFRGDYGGNVVSNATQKPFAETTN- 420
           W  P     AVSN     G G   ++G+ +   G   R   G N  + ++    A  TN 
Sbjct: 361 WGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNP-GANKAAPSSSFSSASATNN 420

Query: 421 -GFERS-YRELYRDQVVHDDVTWQSTAPELDDSMAFGYGL-GNLASDDPTKTSESS--VA 461
            G++ +   E Y +  V+ D TW+S  PE +    F YG+ G + S D +  S S   V 
Sbjct: 421 TGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSPGYVG 480

[Close]

BLAST of CmoCh16G009800 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 439.1 bits (1128), Expect = 4.3e-123
Identity = 254/492 (51.63%), Postives = 323/492 (65.65%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           M+SD GKLFIGGISWDT+EERL++YF ++GEV+EAVI++DRTTGRARGFGFVVFADP VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSS-GRTKKIFVGGLASTVT 120
           E VI EKH IDGR VEAKKAVP+DDQNM+NR+  SSIQGSP   GRT+KIFVGGL S+VT
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVT 120

Query: 121 EADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMVEV 180
           E+DF+ YF+QFGT TDVVVMYDH+TQRPRGFGFITYDSEE V++VL KTFHELNGKMVEV
Sbjct: 121 ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEV 180

Query: 181 KRAIPKEQTPGPNRSPL-VGYNFGMSRASGFLNNYTQGYNMSPLRGIGIRSDGRLSPFLS 240
           KRA+PKE +PGP+RSPL  GY++G++R +  LN Y QG+N + + G G+R DGR SP  +
Sbjct: 181 KRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGA 240

Query: 241 PRTGVP------PLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGYS 300
            R+G         + +NF+QGL  G+    N   +    + +S YY GN+NR+   +GY 
Sbjct: 241 GRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFGPAVGYE 300

Query: 301 GGNGRGDSP-LSSSTWNVWGN-----------GSMSTASMNSSASGMGNFRVAYGNNDDN 360
           GGNG G+S   SS T N+WGN            S S   M  S+SG       +GN+  N
Sbjct: 301 GGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGVN 360

Query: 361 WNFP-----AVSNH---VGGGNVPDNGYAVRDNGVGFRGDYGGNVVSNATQKPFAETTN- 420
           W  P     AVSN     G G   ++G+ +   G   R   G N  + ++    A  TN 
Sbjct: 361 WGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNP-GANKAAPSSSFSSASATNN 420

Query: 421 -GFERS-YRELYRDQVVHDDVTWQSTAPELDDSMAFGYGL-GNLASDDPTKTSESS--VA 459
            G++ +   E Y +  V+ D TW+S  PE +    F YG+ G + S D +  S S   V 
Sbjct: 421 TGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSPGYVG 480

[Close]

BLAST of CmoCh16G009800 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 414.5 bits (1064), Expect = 1.1e-115
Identity = 254/484 (52.48%), Postives = 307/484 (63.43%), Query Frame = 0


Query: 3   SDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVAER 62
           SDLGKLFIGGISWDTDEERL++YFG YG++VEAVIMRDRTTGRARGFGF+VFADP VAER
Sbjct: 12  SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71

Query: 63  VILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSG------RTKKIFVGGLAS 122
           VI++KHIIDGRTVEAKKAVP+DDQ +L R+       SPS G      RTKKIFVGGL S
Sbjct: 72  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 131

Query: 123 TVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKM 182
           ++TEA+F+ YFDQFGTI DVVVMYDH+TQRPRGFGFIT+DSEE VD VLHKTFHELNGKM
Sbjct: 132 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 191

Query: 183 VEVKRAIPKE-QTPGPNRSPLVGY--NFGM----SRASGFLNNYTQGYNMSPLRGIGIRS 242
           VEVKRA+PKE  +  PNRSPL+GY  N+G+    S A+ + N++  GYN +      + S
Sbjct: 192 VEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNN-----NLGS 251

Query: 243 DGRLSPFLSPRTGVPP--LGLNFEQGLRQGY-GRTMNIMNSQAQEQMLSSYYNGNS-NRY 302
            GR SP  S R       LGLN E  L   + G T+        +     Y+N  S NRY
Sbjct: 252 AGRFSPIGSGRNAFSSFGLGLNQELNLNSNFDGNTLGYSRIPGNQ-----YFNSASPNRY 311

Query: 303 IAPIGYSGGNGRGDSPLSSSTWNVWGNGSMSTASMNSSASGMG-NFRVAYGNNDDNWNFP 362
            +PIGY+    RGDS  + S  ++WGN         S +SG G N  V+ GNN  NW   
Sbjct: 312 NSPIGYN----RGDSAYNPSNRDLWGN--------RSDSSGPGWNLGVSVGNNRGNWGLS 371

Query: 363 AVSNHVGGGNVPDNGYAVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQ 422
           +V               V DN  G+   YG    S  +   FA  TNGF+ S  ELYR  
Sbjct: 372 SV---------------VSDNN-GYGRSYGAG--SGLSGLSFAGNTNGFDGSIGELYRGS 431

Query: 423 VVHDDVTWQSTAP------ELDD-SMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTR 462
            V+ D TWQ + P      ELD  S ++G+G+ N+ SD     SE    NY++ +RQ+ R
Sbjct: 432 SVYSDSTWQQSMPHHQSSNELDGLSRSYGFGIDNVGSDPSANASEGYSGNYNVGNRQTHR 455

[Close]

BLAST of CmoCh16G009800 vs. TAIR 10
Match: AT4G26650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 414.5 bits (1064), Expect = 1.1e-115
Identity = 254/484 (52.48%), Postives = 307/484 (63.43%), Query Frame = 0


Query: 3   SDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVAER 62
           SDLGKLFIGGISWDTDEERL++YFG YG++VEAVIMRDRTTGRARGFGF+VFADP VAER
Sbjct: 9   SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 68

Query: 63  VILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSG------RTKKIFVGGLAS 122
           VI++KHIIDGRTVEAKKAVP+DDQ +L R+       SPS G      RTKKIFVGGL S
Sbjct: 69  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 128

Query: 123 TVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKM 182
           ++TEA+F+ YFDQFGTI DVVVMYDH+TQRPRGFGFIT+DSEE VD VLHKTFHELNGKM
Sbjct: 129 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 188

Query: 183 VEVKRAIPKE-QTPGPNRSPLVGY--NFGM----SRASGFLNNYTQGYNMSPLRGIGIRS 242
           VEVKRA+PKE  +  PNRSPL+GY  N+G+    S A+ + N++  GYN +      + S
Sbjct: 189 VEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNN-----NLGS 248

Query: 243 DGRLSPFLSPRTGVPP--LGLNFEQGLRQGY-GRTMNIMNSQAQEQMLSSYYNGNS-NRY 302
            GR SP  S R       LGLN E  L   + G T+        +     Y+N  S NRY
Sbjct: 249 AGRFSPIGSGRNAFSSFGLGLNQELNLNSNFDGNTLGYSRIPGNQ-----YFNSASPNRY 308

Query: 303 IAPIGYSGGNGRGDSPLSSSTWNVWGNGSMSTASMNSSASGMG-NFRVAYGNNDDNWNFP 362
            +PIGY+    RGDS  + S  ++WGN         S +SG G N  V+ GNN  NW   
Sbjct: 309 NSPIGYN----RGDSAYNPSNRDLWGN--------RSDSSGPGWNLGVSVGNNRGNWGLS 368

Query: 363 AVSNHVGGGNVPDNGYAVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQ 422
           +V               V DN  G+   YG    S  +   FA  TNGF+ S  ELYR  
Sbjct: 369 SV---------------VSDNN-GYGRSYGAG--SGLSGLSFAGNTNGFDGSIGELYRGS 428

Query: 423 VVHDDVTWQSTAP------ELDD-SMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTR 462
            V+ D TWQ + P      ELD  S ++G+G+ N+ SD     SE    NY++ +RQ+ R
Sbjct: 429 SVYSDSTWQQSMPHHQSSNELDGLSRSYGFGIDNVGSDPSANASEGYSGNYNVGNRQTHR 452

[Close]

BLAST of CmoCh16G009800 vs. TAIR 10
Match: AT5G55550.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 396.4 bits (1017), Expect = 3.2e-110
Identity = 246/483 (50.93%), Postives = 307/483 (63.56%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPVVA 60
           MESDLGKLFIGGISWDTDEERLRDYF NYG+VVEAVIMRDR TGRARGFGF+VFADP V+
Sbjct: 1   MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60

Query: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSP---SSGRTKKIFVGGLAST 120
           ERVI++KHIIDGRTVEAKKAVP+DDQ +L R+       SP     GRTKKIFVGGL S+
Sbjct: 61  ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSS 120

Query: 121 VTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHELNGKMV 180
           +TE +F+ YFDQFGTI DVVVMYDH+TQRPRGFGFIT+DS++ VDRVLHKTFHELNGK+V
Sbjct: 121 ITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLV 180

Query: 181 EVKRAIPKEQTPGPN-RSPL---VGYNFGMSR--ASGFLNNYTQGYNM-SPLRGIGIRSD 240
           EVKRA+PKE +P  N RSPL   V Y  G +R  A+ + NN+  G    + L  +G    
Sbjct: 181 EVKRAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYNSLGPVG---- 240

Query: 241 GRLSPFL-SPRTGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSS--YYNGNS-NRYI 300
            R SP + S R  V   GL     L      + +  +S      + S  Y+NG S NRY 
Sbjct: 241 RRFSPVIGSGRNAVSAFGLGLNHDLSLNLNPSCDGTSSTFGYNRIPSNPYFNGASPNRYT 300

Query: 301 APIGYSGGNGRGDSPLSSSTWNVWGNGSMSTASMNSSASGMG-NFRVAYGNNDDNWNFPA 360
           +PIG++    R +SP +S+  ++WGN         +  +G G N  V+ GNN  NW  P+
Sbjct: 301 SPIGHN----RTESPYNSNNRDLWGN--------RTDTAGPGWNLNVSNGNNRGNWGLPS 360

Query: 361 VSNHVGGGNVPDNGYAVRDNGVGFRGDYGGNVVSNATQKPFAETTNGFERSYRELYRDQV 420
            S             AV ++  GF  +YG +  S  +  PF    NGFE S  ELYR   
Sbjct: 361 SS-------------AVSNDNNGFGRNYGTS--SGLSSSPF----NGFEGSIGELYRGGS 420

Query: 421 VHDDVTWQ------STAPELDD-SMAFGYGLGNLASDDPTKTSESSVANYDISSRQSTRG 462
           V+ D TWQ       ++ ELD+ S A+GY + N+ SD      E+   +Y++ +RQ+ RG
Sbjct: 421 VYSDSTWQQQQLPSQSSHELDNLSRAYGYDIDNVGSDPSANDPETYNGSYNVGNRQTNRG 448

The following BLAST results are available for this feature:

BLAST of CmoCh16G009800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	6.4e-63	40.00	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
Q9JII5	1.3e-47	40.29	DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2	[more]
Q98SJ2	2.9e-47	41.20	DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1	[more]
Q96EP5	1.4e-46	39.57	DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1	[more]
Q9C652	1.6e-45	48.24	RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1	[more]

BLAST of CmoCh16G009800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWG7	1.8e-265	100.00	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1L601	2.3e-257	96.96	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5A7VHF8	1.2e-218	82.57	Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BKM2	1.2e-218	82.57	heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC10349105...	[more]
A0A0A0L293	5.2e-217	82.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G062570 PE=4 SV=1	[more]

BLAST of CmoCh16G009800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932367.1	3.7e-265	100.00	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata]	[more]
KAG6577500.1	5.5e-261	98.26	Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp...	[more]
KAG7015557.1	1.8e-259	97.61	Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyros...	[more]
XP_023553352.1	2.5e-258	97.61	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007809.1	4.8e-257	96.96	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima] >XP_023007810....	[more]

BLAST of CmoCh16G009800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07810.1	5.1e-124	51.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	4.3e-123	51.63	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	1.1e-115	52.48	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.2	1.1e-115	52.48	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G55550.1	3.2e-110	50.93	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 108..180 e-value: 2.1E-22 score: 90.4 coord: 7..78 e-value: 2.2E-23 score: 93.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 109..166 e-value: 1.2E-13 score: 50.7 coord: 8..74 e-value: 5.7E-16 score: 58.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..82 score: 17.728121
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 107..184 score: 17.131182
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 104..192 e-value: 2.5E-26 score: 93.7
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 6..88 e-value: 1.8E-26 score: 94.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 434..461
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 433..461
None	No IPR available	PANTHER	PTHR48032	RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6	coord: 1..461
None	No IPR available	PANTHER	PTHR48032:SF2	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 1..461
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 8..78 e-value: 1.71919E-38 score: 132.324
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 105..184 e-value: 2.18701E-48 score: 158.683
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 107..194
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G009800.1	CmoCh16G009800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding