CmoCh16G009670 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G009670
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pectin lyase-like superfamily protein, putative
Location	Cmo_Chr16: 6494973 .. 6496995 (-)
RNA-Seq Expression	CmoCh16G009670
Synteny	CmoCh16G009670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGTGATTTCTTGGCTTCGCTAGACAAGTTAGTAATCTCGACAAGTGTTAGGAGGTGAGAATTTGAGGAAGATAAGAGTGATATTTTTCCTTAAAAACTTCATTGACATTAATTACACTATCATAATTTTGCAATAGAAGAATAAAATCTCAATGGTGAGAGATTTCTTTTTTGGCTGTTAAAATATGTTATAAAAATAAAGAAAAGTAAACACAAAAAAAATCAATTATATTAGAGAAAAGAGAGAAAATGGGTTTGAAATTATAAGAGATTGGATGTTTAGTGTTCCTTATCATCTTACTTTTCATTCCTAAATGTTATTCTCAACCTAAAGTATTCAATATCATCCAATTTGGTGCGATACCCGATGAAAAAACGGATAACACGAAGGTAAAAGTTTATGCTCGATTCAAACAACTTTTTGTTCATATTTACAATATTAGTATATGTTTCATATCTTGGTAACATTTTTATTTTTTATTTTTTATTTTTTTAAAAGTTTTTGAAATTTAAAAGCATTAGAAACATTATTTTAAAAATACCATTTTCGAAATGGGATACAATTCATTTTCTTAAGTTTTTTTTTTTATTATTTTATCTATTTCAGGTCTATGAAACAAATTTTTAAAACAATTTTTTTCTTTGGATTATTCATCAGCATAATAAATTCTGTAAATATTTAATTTTTATATTATTTATGGTAAATTCAGCCGTTAAATTTTTTTTTTTTAAATTTTCAAATAATAAAATTTAAAATTTAAGGTATTTTGTTGAAAGTAGGTTAGATTATTTGGTTTGTATAGGCATTAAGTAGCACATGGAGAGAAGCTTGTGGACATAACGGAGGTGGTGTAGTTTTAGTACTCGAAGGGAGGTTTCTGGTTTTGCCGTTGGTGCTTGAAGGTCCATGTAAAGGATCCATTGATCTGAATATTAAAGGTGAACTGTTGACTCCAGTTGCCAAGAATTTTGCCATCGGTGAATATTGGCTGAGTATTTATCAAGTCGACAACTTTTTTGTTGAAGGTCCTGGCGGCTTGAACGGCGGTGGTTCTTCAACTTGGTCTTCCAACACTTCTAAACGTCCAATTGTAAGTCTATTTTAAGGTTTAAATAATAATAAAAAAAAAGTTAGATTTGTTAGGTTGCAGTTAAATGGATGCAATCATTTTACATTTATTTTAAATGTACACCAAAATATACTTGTGCATTGATATAATGTTTGGTTGAATGTAGACCATGAAACTTTTTAATGTCAACACGGCCACAATTGCAAATATAACATCGTCCAATAGCAAGTTGTTCCATTTTGCTGTGCATGGATGTCGTGATGTCACGTTTGATCACGTTACAGTGATAGCTCCAGCAGACAGCCCTAATACAGATGCAATTCACGTTTCAAACTCAAGTGGTGTCAACATTATGCATTCAGTGATTGGCACTGGAGACGATTGTATCTCTCTTGGTCCTGGAAGTAAATTCATCAACATGACAGATGTCCAGTGTGGTCCAGGTCATGGAATTAGCATCGGTAGCCTCGGGAAGTACCCAAATGAAGAAGATGTCTCTGAAGTCACAGTGAGAAACTCCACATTTGTTGGCACGACTAATGGTGTGAGGATCAAAACATGGTCATCTTCATTTTCTAGCGTGGTTAGCAAGATCGCTTTTATCAATCTCCAAATGAAGGACGTAAAAAATCCTATCATCATGAATCAAAAATATTGCCTTGACTGCGACAACATTTATGTTTGCCTTGACTGCGACAAACATAAATGTTGTTTGTGGTCGACAGAGTACTTCAAGGTGAAATTCGAGACGTGAGATATGAAGGTATACGGGGGACTTCAGCAACCCAAGTGGCAGTAAATTTTGAATGCAGCCAAGTTTTTCCATGCCAAGGCATAGTGTTGCAAGACATTAACCTCTCCTTCAATGGTGGTGGCCAACCAACTTCCATTTGTCACAATGTGAAAGGCTCTGCTTTTGGCAAACAACTTCCTTCCTCTTGCCTTTAA

mRNA sequence

ATGGCTGTATTCAATATCATCCAATTTGGTGCGATACCCGATGAAAAAACGGATAACACGAAGTTTTTGAAATTTAAAAGCATTAGAAACATTATTTTAAAAATACCATTTTCGAAATGGGATACAATTCATTTTCTTAAGTCTATGAAACAAATTTTTAAAACAATTTTTTTCTTTGGATTATTCATCAGCATAATAAATTCTGCATTAAGTAGCACATGGAGAGAAGCTTGTGGACATAACGGAGGTGGTGTAGTTTTAGTACTCGAAGGGAGGTTTCTGGTTTTGCCGTTGGTGCTTGAAGGTCCATGTAAAGGATCCATTGATCTGAATATTAAAGGTGAACTGTTGACTCCAGTTGCCAAGAATTTTGCCATCGGTGAATATTGGCTGAGTATTTATCAAGTCGACAACTTTTTTGTTGAAGGTCCTGGCGGCTTGAACGGCGGTGGTTCTTCAACTTGGTCTTCCAACACTTCTAAACGTCCAATTACCATGAAACTTTTTAATGTCAACACGGCCACAATTGCAAATATAACATCGTCCAATAGCAAGTTGTTCCATTTTGCTGTGCATGGATGTCGTGATGTCACGTTTGATCACGTTACAGTGATAGCTCCAGCAGACAGCCCTAATACAGATGCAATTCACGTTTCAAACTCAAGTGGTGTCAACATTATGCATTCAGTGATTGGCACTGGAGACGATTGTATCTCTCTTGGTCCTGGAAGTAAATTCATCAACATGACAGATGTCCAGTGTGGTCCAGGTCATGGAATTAGCATCGGTAGCCTCGGGAAGTACCCAAATGAAGAAGATGTCTCTGAAGTCACAGTGAGAAACTCCACATTTGTTGGCACGACTAATGGTGTGAGGATCAAAACATGGTCATCTTCATTTTCTAGCGTGGTTAGCAAGATCGCTTTTATCAATCTCCAAATGAAGGACGTAAAAAATCCTATCATCATGAATCAAAAATATTGCCTTGACTGCGACAACATTTATGTTTGCCTTGACTGCGACAAACATAAATGTTGTTTAGTACTTCAAGGTGAAATTCGAGACGTGAGATATGAAGGTATACGGGGGACTTCAGCAACCCAAGTGGCAGTAAATTTTGAATGCAGCCAAGTTTTTCCATGCCAAGGCATAGTGTTGCAAGACATTAACCTCTCCTTCAATGGTGGTGGCCAACCAACTTCCATTTGTCACAATGTGAAAGGCTCTGCTTTTGGCAAACAACTTCCTTCCTCTTGCCTTTAA

Coding sequence (CDS)

ATGGCTGTATTCAATATCATCCAATTTGGTGCGATACCCGATGAAAAAACGGATAACACGAAGTTTTTGAAATTTAAAAGCATTAGAAACATTATTTTAAAAATACCATTTTCGAAATGGGATACAATTCATTTTCTTAAGTCTATGAAACAAATTTTTAAAACAATTTTTTTCTTTGGATTATTCATCAGCATAATAAATTCTGCATTAAGTAGCACATGGAGAGAAGCTTGTGGACATAACGGAGGTGGTGTAGTTTTAGTACTCGAAGGGAGGTTTCTGGTTTTGCCGTTGGTGCTTGAAGGTCCATGTAAAGGATCCATTGATCTGAATATTAAAGGTGAACTGTTGACTCCAGTTGCCAAGAATTTTGCCATCGGTGAATATTGGCTGAGTATTTATCAAGTCGACAACTTTTTTGTTGAAGGTCCTGGCGGCTTGAACGGCGGTGGTTCTTCAACTTGGTCTTCCAACACTTCTAAACGTCCAATTACCATGAAACTTTTTAATGTCAACACGGCCACAATTGCAAATATAACATCGTCCAATAGCAAGTTGTTCCATTTTGCTGTGCATGGATGTCGTGATGTCACGTTTGATCACGTTACAGTGATAGCTCCAGCAGACAGCCCTAATACAGATGCAATTCACGTTTCAAACTCAAGTGGTGTCAACATTATGCATTCAGTGATTGGCACTGGAGACGATTGTATCTCTCTTGGTCCTGGAAGTAAATTCATCAACATGACAGATGTCCAGTGTGGTCCAGGTCATGGAATTAGCATCGGTAGCCTCGGGAAGTACCCAAATGAAGAAGATGTCTCTGAAGTCACAGTGAGAAACTCCACATTTGTTGGCACGACTAATGGTGTGAGGATCAAAACATGGTCATCTTCATTTTCTAGCGTGGTTAGCAAGATCGCTTTTATCAATCTCCAAATGAAGGACGTAAAAAATCCTATCATCATGAATCAAAAATATTGCCTTGACTGCGACAACATTTATGTTTGCCTTGACTGCGACAAACATAAATGTTGTTTAGTACTTCAAGGTGAAATTCGAGACGTGAGATATGAAGGTATACGGGGGACTTCAGCAACCCAAGTGGCAGTAAATTTTGAATGCAGCCAAGTTTTTCCATGCCAAGGCATAGTGTTGCAAGACATTAACCTCTCCTTCAATGGTGGTGGCCAACCAACTTCCATTTGTCACAATGTGAAAGGCTCTGCTTTTGGCAAACAACTTCCTTCCTCTTGCCTTTAA

Protein sequence

MAVFNIIQFGAIPDEKTDNTKFLKFKSIRNIILKIPFSKWDTIHFLKSMKQIFKTIFFFGLFISIINSALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFAIGEYWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPITMKLFNVNTATIANITSSNSKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLGPGSKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFSSVVSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIRDVRYEGIRGTSATQVAVNFECSQVFPCQGIVLQDINLSFNGGGQPTSICHNVKGSAFGKQLPSSCL

Homology

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BLAST of CmoCh16G009670 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 6.7e-75
Identity = 149/361 (41.27%), Postives = 214/361 (59.28%), Query Frame = 0


Query: 66  INSALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGS-IDLNIKGELLTPVAKNF 125
           I+ A+   W+ AC   G   VL+ +G + +  + ++GPCKGS I   I G +  P   + 
Sbjct: 23  ISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKGSKIGFQIDGVVKAPADPSK 82

Query: 126 AIGEYWLSIYQVDNFFVEGPGGLNGGGSSTWS-SNTSKRP------ITMKLFNVNTATIA 185
              + W+S Y++D   V G G L+G G + W+ +N  K P      + ++   +  A + 
Sbjct: 83  FKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKHAAMNLRFDFLKHAMVR 142

Query: 186 NITSSNSKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDC 245
           +ITS NSK+FH  V  C D+TF HVTV AP  S NTD IHV  S GV I ++ I TGDDC
Sbjct: 143 DITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDC 202

Query: 246 ISLGPGSKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWS 305
           IS+GPGS+ + +T V CGPGHGISIGSLG+Y NE++V  +TV+  TF GT NGVR+KTW 
Sbjct: 203 ISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTFSGTMNGVRVKTWP 262

Query: 306 SSFSSVVSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIRDVR 365
           +S     + + F +L M +V+NP+I++Q+YC           C +     +   ++ ++ 
Sbjct: 263 NSPPGAATDLTFQDLTMNNVQNPVILDQEYC-------PYGQCSRQAPSRI---KLSNIN 322

Query: 366 YEGIRGTSATQVAVNFECSQVFPCQGIVLQDINLSFNGGGQP-TSICHNVKGSAFGKQLP 418
           +  IRGTS  +VAV   CS   PC  + + +INLS+ G G P TS C NVK +  GKQ+P
Sbjct: 323 FNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVKPTFSGKQVP 373

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BLAST of CmoCh16G009670 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 7.4e-74
Identity = 143/362 (39.50%), Postives = 215/362 (59.39%), Query Frame = 0


Query: 69  ALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFAIGE 128
           AL++ W+EAC       +LV +G F V  + LEGPCK SI L ++G L  P   +   G 
Sbjct: 5   ALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSKIKGL 64

Query: 129 YWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKR--------PITMKLFNVNTATIANIT 188
            W+++ ++D   + G G  +G G S W  N   +         + ++L+ V  + + ++T
Sbjct: 65  GWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILRDVT 124

Query: 189 SSNSKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISL 248
           + +SK FH  V GC+++TF+   + A   S NTD IH+  S GVNI+++ I TGDDCISL
Sbjct: 125 TLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISL 184

Query: 249 GPGSKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSF 308
           G GSK IN+T++ CGPGHGIS+GSLG+Y NEE V  + V+N T  G+ NGVRIKTW  S 
Sbjct: 185 GDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTWPKSE 244

Query: 309 SSVVSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIR--DVRY 368
               S++ F ++ M  V  PI+++Q Y            C  ++C   +   ++   + +
Sbjct: 245 PGEASEMHFQDITMNSVGTPILIDQGY------------CPYNQCTAEVPSSVKLSKISF 304

Query: 369 EGIRGTSATQVAVNFECSQVFPCQGIVLQDINLSFNG-GGQPTSICHNVKGSAFGKQLPS 420
           + I+GTS T+ AV   CS+ FPC G+ L DI+L+++G GG  TS+C N+K +  GKQ+P+
Sbjct: 305 KNIKGTSTTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPA 354

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BLAST of CmoCh16G009670 vs. ExPASy Swiss-Prot
Match: P35339 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.8e-73
Identity = 145/357 (40.62%), Postives = 210/357 (58.82%), Query Frame = 0


Query: 69  ALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELL-TPVAKNFAIG 128
           A+   W  ACG  G   +L+ +G FLV PL   GPCKG + + + G LL T     +   
Sbjct: 59  AVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYKDH 118

Query: 129 EYWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKR-------PITMKLFNVNTATIANIT 188
             W+ I +VDN  + G G L+G G + WS N+  +       P ++ +  VN   ++ IT
Sbjct: 119 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGIT 178

Query: 189 SSNSKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISL 248
             NSK FH  ++ C+D+    V V AP DSPNTD IH+ +SSGV I ++VIG GDDCIS+
Sbjct: 179 LLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISI 238

Query: 249 GPGSKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSF 308
           GPG+  +N+T V CGPGHGISIGSLG+Y +E+DV+++ V++ T   T NGVRIK +  + 
Sbjct: 239 GPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAA 298

Query: 309 SSV-VSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCL---VLQGEIRDV 368
           S +  SKI + N++M+D   PII++ KYC              +K C      +  ++DV
Sbjct: 299 SVLTASKIHYENIKMEDSGYPIIIDMKYC-------------PNKLCTANGASKVTVKDV 358

Query: 369 RYEGIRGTSATQVAVNFECSQVFPCQGIVLQDINLSFNGGGQPT-SICHNVKGSAFG 413
            ++ I GTS+T  AVN  C+   PC G+ + D+N+ ++G    T ++C N KGSA G
Sbjct: 359 TFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKG 402

[Close]

BLAST of CmoCh16G009670 vs. ExPASy Swiss-Prot
Match: P26216 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.5e-71
Identity = 142/357 (39.78%), Postives = 209/357 (58.54%), Query Frame = 0


Query: 69  ALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELL-TPVAKNFAIG 128
           A+   W  ACG  G   +L+ +G FLV  L   GPCKG + + + G LL T     +   
Sbjct: 59  AVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDH 118

Query: 129 EYWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKR-------PITMKLFNVNTATIANIT 188
             W+ I +VDN  + G G L+G G + WS N+  +       P ++ +  VN   ++ +T
Sbjct: 119 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 178

Query: 189 SSNSKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISL 248
             NSK FH  ++ C+D+    VTV AP DSPNTD IH+ +SSG+ I ++VIG GDDCIS+
Sbjct: 179 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 238

Query: 249 GPGSKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSF 308
           GPG+  +N+T V CGPGHGISIGSLG+Y +E+DV+++ V++ T   T  GVRIK +  + 
Sbjct: 239 GPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAA 298

Query: 309 SSV-VSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCL---VLQGEIRDV 368
           S + VSKI + N++M+D  NPI ++ KYC              +K C      +  ++DV
Sbjct: 299 SVLTVSKIHYENIKMEDSANPIFIDMKYC-------------PNKLCTANGASKVTVKDV 358

Query: 369 RYEGIRGTSATQVAVNFECSQVFPCQGIVLQDINLSFNGGGQPT-SICHNVKGSAFG 413
            ++ I GTS+T  AV+  C+   PC G+ + D+N+ ++G    T +IC N KGS  G
Sbjct: 359 TFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKG 402

[Close]

BLAST of CmoCh16G009670 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 4.5e-71
Identity = 142/353 (40.23%), Postives = 205/353 (58.07%), Query Frame = 0


Query: 74  WREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFAIGEYWLSI 133
           W+EAC       V++ +G +L+  + LEGPCK  I++N++G +  P   +      W+  
Sbjct: 53  WKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRF 112

Query: 134 YQVDNFFVEGPGGLNGGGSSTWSSNT-------SKRPITMKLFNVNTATIANITSSNSKL 193
           Y V+NF + G G  +G GS  +  NT       SK P+ ++   V  A I +ITS +SKL
Sbjct: 113 YSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKL 172

Query: 194 FHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLGPGSKF 253
           FH  V  C+++T + + + AP +SPNTD IH+  S GVNI+ S I TGDDCIS+G G+K 
Sbjct: 173 FHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKN 232

Query: 254 INMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFSSVVSK 313
           + + ++ CGPGHGISIGSLGK+ NEE V  + + N T   T+NG RIKTW       VS+
Sbjct: 233 MVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSE 292

Query: 314 IAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIRDVRYEGIRGTSA 373
           I F ++ M +V +PI+++Q+YC           C K++   V   ++ ++ ++ IRGTSA
Sbjct: 293 IHFEDITMNNVSSPILIDQQYC-------PWNKCKKNEESKV---KLSNISFKNIRGTSA 352

Query: 374 TQVAVNFECSQVFPCQGIVLQDINLSFNGGGQPTSICHNVKGSAFGKQLPSSC 420
              A+ F CS   PCQ + L DI++  NG    TS C NVK    GK  P  C
Sbjct: 353 LPEAIKFICSGSSPCQNVELADIDIQHNGAEPATSQCLNVKPITIGKLNPIPC 395

[Close]

BLAST of CmoCh16G009670 vs. ExPASy TrEMBL
Match: A0A6J1EW42 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438611 PE=3 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 2.4e-160
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 69  ALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFAIGE 128
           ALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFAIGE
Sbjct: 96  ALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFAIGE 155

Query: 129 YWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPITMKLFNVNTATIANITSSNSKLFH 188
           YWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPITMKLFNVNTATIANITSSNSKLFH
Sbjct: 156 YWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPITMKLFNVNTATIANITSSNSKLFH 215

Query: 189 FAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLGPGSKFIN 248
           FAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLGPGSKFIN
Sbjct: 216 FAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLGPGSKFIN 275

Query: 249 MTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFSSVVSKIA 308
           MTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFSSVVSKIA
Sbjct: 276 MTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFSSVVSKIA 335

Query: 309 FINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCL 348
           FINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCL
Sbjct: 336 FINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCL 374

[Close]

BLAST of CmoCh16G009670 vs. ExPASy TrEMBL
Match: A0A6J1F153 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438612 PE=3 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 2.4e-152
Identity = 284/417 (68.11%), Postives = 311/417 (74.58%), Query Frame = 0


Query: 4   FNIIQFGAIPDEKTDNTKFLKFKSIRNIILKIPFSKWDTIHFLKSMKQIFKTIFFFGLFI 63
           FNIIQFGA  D KT++TK                                          
Sbjct: 23  FNIIQFGATADGKTESTK------------------------------------------ 82

Query: 64  SIINSALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKN 123
                ALS  WREACGHNG GVVLV  GRFL+LPLVLEGPCK SI L I GELL PV+KN
Sbjct: 83  -----ALSEAWREACGHNGHGVVLVPAGRFLILPLVLEGPCKVSIGLLIHGELLAPVSKN 142

Query: 124 FAIGEYWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPITMKLFNVNTATIANITSSN 183
           FA G YWLSI +VDN FV+G G LNGGGSS W S+TS RP++MKL +VNTA I+ ITSSN
Sbjct: 143 FATGGYWLSISKVDNLFVDGSGSLNGGGSSAWPSDTSNRPVSMKLSSVNTARISKITSSN 202

Query: 184 SKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLGPG 243
           SK FHF VHGCRDVTFDHVTVIAPADSPNTD IHVS SSG+NIMHSVI TGDDCISLGPG
Sbjct: 203 SKFFHFGVHGCRDVTFDHVTVIAPADSPNTDGIHVSKSSGINIMHSVIRTGDDCISLGPG 262

Query: 244 SKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFSSV 303
           SKFIN+TD+QCGPGHGISIGSLGKYPNEEDVSEVT+R+STFVGT NGVRIKTWSSSFSS 
Sbjct: 263 SKFINITDIQCGPGHGISIGSLGKYPNEEDVSEVTIRDSTFVGTDNGVRIKTWSSSFSSF 322

Query: 304 VSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIRDVRYEGIRG 363
           VSKIAF+NL+MKDVKNPII++QKYC DC         DK     V   +IRDVRYE IRG
Sbjct: 323 VSKIAFLNLEMKDVKNPIIIDQKYCPDCKE-------DKMSNSKV---QIRDVRYEDIRG 382

Query: 364 TSATQVAVNFECSQVFPCQGIVLQDINLSFNGGGQPTSICHNVKGSAFGKQLPSSCL 421
           +S +QVAV+FECSQV  C+ IVLQDINLS+ G GQPTSICHNV+GSA GKQ PSSCL
Sbjct: 383 SSTSQVAVSFECSQVCSCESIVLQDINLSYKGDGQPTSICHNVQGSASGKQFPSSCL 382

[Close]

BLAST of CmoCh16G009670 vs. ExPASy TrEMBL
Match: A0A6J1L832 (exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111500170 PE=3 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 4.6e-143
Identity = 262/418 (62.68%), Postives = 299/418 (71.53%), Query Frame = 0


Query: 3   VFNIIQFGAIPDEKTDNTKFLKFKSIRNIILKIPFSKWDTIHFLKSMKQIFKTIFFFGLF 62
           VFNI+QFGA  D +TD+T+                                         
Sbjct: 45  VFNIMQFGASNDGRTDSTQ----------------------------------------- 104

Query: 63  ISIINSALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAK 122
                 ALS  WR+AC  +GGGVVLV +GRFL+  LVL+GPCKGSI L I G+LL P+  
Sbjct: 105 ------ALSKAWRQACWRDGGGVVLVPDGRFLIFSLVLKGPCKGSIGLRINGQLLAPIDP 164

Query: 123 NFAIGEYWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPITMKLFNVNTATIANITSS 182
           NFAI + WLSIY+VDN FV+G G  +G G   WS  T  RPI+MKL  +N A I  ITS 
Sbjct: 165 NFAIAQIWLSIYEVDNLFVDGYGSFDGRGFLAWSIKTFNRPISMKLTKINHARITGITSY 224

Query: 183 NSKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLGP 242
           NSK FHF VHGC DVTFDH+ V+AP DSPNTD IH+S SSG+NI+HS   TGDDCISLGP
Sbjct: 225 NSKFFHFGVHGCSDVTFDHIRVMAPRDSPNTDGIHISKSSGINIVHSRFDTGDDCISLGP 284

Query: 243 GSKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFSS 302
           GS+FIN+T++ CGPGHGISIGSLGKYPNEEDVS+V VR+STFVGT NGVRIKTWSSS  S
Sbjct: 285 GSRFINITNIHCGPGHGISIGSLGKYPNEEDVSDVLVRDSTFVGTDNGVRIKTWSSSHPS 344

Query: 303 VVSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIRDVRYEGIR 362
            V+KI F+NL+MKDV+NP+I++QKYCLDC         DK     V   +IRDVRYEGIR
Sbjct: 345 FVTKIVFLNLEMKDVRNPMIIDQKYCLDCSR-------DKMSTSRV---QIRDVRYEGIR 404

Query: 363 GTSATQVAVNFECSQVFPCQGIVLQDINLSFNGGGQPTSICHNVKGSAFGKQLPSSCL 421
           GTSATQ AVNFECSQVFPC+GIVLQDINLSFNGGGQPTSICHNVKGSAFGKQLPSSCL
Sbjct: 405 GTSATQAAVNFECSQVFPCEGIVLQDINLSFNGGGQPTSICHNVKGSAFGKQLPSSCL 405

[Close]

BLAST of CmoCh16G009670 vs. ExPASy TrEMBL
Match: A0A0A0L7H9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063610 PE=3 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 3.1e-139
Identity = 242/355 (68.17%), Postives = 290/355 (81.69%), Query Frame = 0


Query: 67  NSALSSTWREACGHNGGGVVLV-LEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFA 126
           + ALSS W EAC +NGGG+VL+  +GRFLVLPL+L+GPC G I + + GELL P+ ++FA
Sbjct: 14  SKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFA 73

Query: 127 IGEYWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPITMKLFNVNTATIANITSSNSK 186
            G+YWLSI QV+N F++G G L+G GS+ W S +  RP++M+L  +N A I NI S NSK
Sbjct: 74  TGDYWLSIDQVNNLFIDGLGSLDGRGSTAWPSTSHNRPVSMRLNGINNARITNIKSYNSK 133

Query: 187 LFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLGPGSK 246
           LFHFA+HGCRDVTFDHVTVIAPA+SPNTD IH+S+SSG+NIMHS IGTGDDCISLGPGSK
Sbjct: 134 LFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIGTGDDCISLGPGSK 193

Query: 247 FINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFSSVVS 306
           FIN+T++QCGPGHGISIGSLGKYPNEEDV EVTVR+STF+GT+NGVRIKTWSSS+SS+VS
Sbjct: 194 FINITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVRIKTWSSSYSSMVS 253

Query: 307 KIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIRDVRYEGIRGTS 366
           K+ F+NLQM +VKNPII++Q YC           C   K       +I+DVRYEGIRG+S
Sbjct: 254 KVTFLNLQMNNVKNPIIIDQNYCPG--------SCGSQKMMSKSMVQIKDVRYEGIRGSS 313

Query: 367 ATQVAVNFECSQVFPCQGIVLQDINLSFNGGGQPTSICHNVKGSAFGKQLPSSCL 421
            TQVAV+FECS+V PCQGIVLQDINL FNGGG+ TS CHNV+GSAFG QLP SCL
Sbjct: 314 NTQVAVDFECSEVVPCQGIVLQDINLPFNGGGRTTSNCHNVRGSAFGHQLPPSCL 360

[Close]

BLAST of CmoCh16G009670 vs. ExPASy TrEMBL
Match: A0A5D3BB58 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001870 PE=3 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 8.3e-137
Identity = 248/359 (69.08%), Postives = 290/359 (80.78%), Query Frame = 0


Query: 69  ALSSTWREACGHNGGGVVLV-LEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFAIG 128
           ALSS W  AC +NGGGVVL+  +GRFLVLPL+L+GPC G I + + GELL P  K FA G
Sbjct: 2   ALSSAWSGACENNGGGVVLIPAQGRFLVLPLLLQGPCHGVIRIQLDGELLAPSDKQFATG 61

Query: 129 EYWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPI------TMKLFNVNTATIANITS 188
           +YWLSI  V+N F++G G L G GSS W S+++ RPI      +MKL N+NTA+I NI+S
Sbjct: 62  DYWLSIQNVNNLFIDGLGRLTGSGSSAWPSHSANRPIVRFHLSSMKLNNINTASIKNISS 121

Query: 189 SNSKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLG 248
            +SKLFHFAVHG RDVTFDHVTV+AP DSPNTD IH+S+SSG+NIMHS IGTGDDCISLG
Sbjct: 122 YDSKLFHFAVHGSRDVTFDHVTVVAPGDSPNTDGIHISSSSGINIMHSTIGTGDDCISLG 181

Query: 249 PGSKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFS 308
           PGSK IN+T+V CGPGHGISIGSLGKYPNEE+V EVTVR+STFVGTTNG RIK+WSSS+S
Sbjct: 182 PGSKSINITNVYCGPGHGISIGSLGKYPNEENVFEVTVRDSTFVGTTNGARIKSWSSSYS 241

Query: 309 SVVSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIRDVRYEGI 368
           S+VSK+ F+NLQM +VKNPII++Q YC D      C   +  K     + +I DVRYEGI
Sbjct: 242 SMVSKVTFVNLQMNNVKNPIIIDQSYCPDS-----CGPNEMSKS----KVQIEDVRYEGI 301

Query: 369 RGTSATQVAVNFECSQVFPCQGIVLQDINLSFNGGGQPTSICHNVKGSAFGKQLPSSCL 421
           RG+S TQVAV+FECSQV PCQGIVLQDINL+FNGGGQ TSICHNVKGSAFG+QLP SCL
Sbjct: 302 RGSSNTQVAVDFECSQVLPCQGIVLQDINLTFNGGGQSTSICHNVKGSAFGQQLPPSCL 351

[Close]

BLAST of CmoCh16G009670 vs. NCBI nr
Match: XP_022932247.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 575.1 bits (1481), Expect = 5.0e-160
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 69  ALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFAIGE 128
           ALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFAIGE
Sbjct: 96  ALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFAIGE 155

Query: 129 YWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPITMKLFNVNTATIANITSSNSKLFH 188
           YWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPITMKLFNVNTATIANITSSNSKLFH
Sbjct: 156 YWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPITMKLFNVNTATIANITSSNSKLFH 215

Query: 189 FAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLGPGSKFIN 248
           FAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLGPGSKFIN
Sbjct: 216 FAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLGPGSKFIN 275

Query: 249 MTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFSSVVSKIA 308
           MTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFSSVVSKIA
Sbjct: 276 MTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFSSVVSKIA 335

Query: 309 FINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCL 348
           FINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCL
Sbjct: 336 FINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCL 374

[Close]

BLAST of CmoCh16G009670 vs. NCBI nr
Match: XP_022932248.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 548.5 bits (1412), Expect = 5.0e-152
Identity = 284/417 (68.11%), Postives = 311/417 (74.58%), Query Frame = 0


Query: 4   FNIIQFGAIPDEKTDNTKFLKFKSIRNIILKIPFSKWDTIHFLKSMKQIFKTIFFFGLFI 63
           FNIIQFGA  D KT++TK                                          
Sbjct: 23  FNIIQFGATADGKTESTK------------------------------------------ 82

Query: 64  SIINSALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKN 123
                ALS  WREACGHNG GVVLV  GRFL+LPLVLEGPCK SI L I GELL PV+KN
Sbjct: 83  -----ALSEAWREACGHNGHGVVLVPAGRFLILPLVLEGPCKVSIGLLIHGELLAPVSKN 142

Query: 124 FAIGEYWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPITMKLFNVNTATIANITSSN 183
           FA G YWLSI +VDN FV+G G LNGGGSS W S+TS RP++MKL +VNTA I+ ITSSN
Sbjct: 143 FATGGYWLSISKVDNLFVDGSGSLNGGGSSAWPSDTSNRPVSMKLSSVNTARISKITSSN 202

Query: 184 SKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLGPG 243
           SK FHF VHGCRDVTFDHVTVIAPADSPNTD IHVS SSG+NIMHSVI TGDDCISLGPG
Sbjct: 203 SKFFHFGVHGCRDVTFDHVTVIAPADSPNTDGIHVSKSSGINIMHSVIRTGDDCISLGPG 262

Query: 244 SKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFSSV 303
           SKFIN+TD+QCGPGHGISIGSLGKYPNEEDVSEVT+R+STFVGT NGVRIKTWSSSFSS 
Sbjct: 263 SKFINITDIQCGPGHGISIGSLGKYPNEEDVSEVTIRDSTFVGTDNGVRIKTWSSSFSSF 322

Query: 304 VSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIRDVRYEGIRG 363
           VSKIAF+NL+MKDVKNPII++QKYC DC         DK     V   +IRDVRYE IRG
Sbjct: 323 VSKIAFLNLEMKDVKNPIIIDQKYCPDCKE-------DKMSNSKV---QIRDVRYEDIRG 382

Query: 364 TSATQVAVNFECSQVFPCQGIVLQDINLSFNGGGQPTSICHNVKGSAFGKQLPSSCL 421
           +S +QVAV+FECSQV  C+ IVLQDINLS+ G GQPTSICHNV+GSA GKQ PSSCL
Sbjct: 383 SSTSQVAVSFECSQVCSCESIVLQDINLSYKGDGQPTSICHNVQGSASGKQFPSSCL 382

[Close]

BLAST of CmoCh16G009670 vs. NCBI nr
Match: XP_023552935.1 (exopolygalacturonase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 530.0 bits (1364), Expect = 1.8e-146
Identity = 260/346 (75.14%), Postives = 291/346 (84.10%), Query Frame = 0


Query: 67  NSALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFAI 126
           + ALS  W+EACGHNG G+VLV  G FLVLPLVLEGPCKGSI L I G+LL PV+KNFA 
Sbjct: 101 SQALSRAWKEACGHNGHGIVLVPAGSFLVLPLVLEGPCKGSIGLLINGKLLAPVSKNFAT 160

Query: 127 GEYWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPITMKLFNVNTATIANITSSNSKL 186
           G+YWLSI +VDNFFV G G LNGGGSS W S+TS RPI+MKL  VNTA I+ ITSSNSK 
Sbjct: 161 GKYWLSISKVDNFFVNGSGSLNGGGSSAWHSDTSNRPISMKLSGVNTARISKITSSNSKF 220

Query: 187 FHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLGPGSKF 246
           FHF VH CRDVTFDHVT+IAPADSPNTD IH+S SSG+ IMHSVIGTGDDCISLGPGSKF
Sbjct: 221 FHFGVHKCRDVTFDHVTIIAPADSPNTDGIHISKSSGITIMHSVIGTGDDCISLGPGSKF 280

Query: 247 INMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFSSVVSK 306
           IN+TDVQCGPGHGISIGSLGKYPNEEDVSEVT+R+STFVGT NGVRIKTWS+SFSS VSK
Sbjct: 281 INITDVQCGPGHGISIGSLGKYPNEEDVSEVTIRDSTFVGTDNGVRIKTWSTSFSSSVSK 340

Query: 307 IAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIRDVRYEGIRGTSA 366
           IAF+NL+MKDVKNPII++QKY         C DCD+HK     + +I+DVRYEGI G+S 
Sbjct: 341 IAFLNLEMKDVKNPIIIDQKY---------CTDCDEHKMS-NSKVQIKDVRYEGIIGSST 400

Query: 367 TQVAVNFECSQVFPCQGIVLQDINLSFNGGGQPTSICHNVKGSAFG 413
           +Q AV+FECSQV  C+ IVLQDINLS+ G G+PTSICHNVKGSAFG
Sbjct: 401 SQAAVSFECSQVCSCESIVLQDINLSYKGDGEPTSICHNVKGSAFG 436

[Close]

BLAST of CmoCh16G009670 vs. NCBI nr
Match: XP_023007598.1 (exopolygalacturonase-like [Cucurbita maxima])

HSP 1 Score: 517.7 bits (1332), Expect = 9.4e-143
Identity = 262/418 (62.68%), Postives = 299/418 (71.53%), Query Frame = 0


Query: 3   VFNIIQFGAIPDEKTDNTKFLKFKSIRNIILKIPFSKWDTIHFLKSMKQIFKTIFFFGLF 62
           VFNI+QFGA  D +TD+T+                                         
Sbjct: 45  VFNIMQFGASNDGRTDSTQ----------------------------------------- 104

Query: 63  ISIINSALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAK 122
                 ALS  WR+AC  +GGGVVLV +GRFL+  LVL+GPCKGSI L I G+LL P+  
Sbjct: 105 ------ALSKAWRQACWRDGGGVVLVPDGRFLIFSLVLKGPCKGSIGLRINGQLLAPIDP 164

Query: 123 NFAIGEYWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPITMKLFNVNTATIANITSS 182
           NFAI + WLSIY+VDN FV+G G  +G G   WS  T  RPI+MKL  +N A I  ITS 
Sbjct: 165 NFAIAQIWLSIYEVDNLFVDGYGSFDGRGFLAWSIKTFNRPISMKLTKINHARITGITSY 224

Query: 183 NSKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLGP 242
           NSK FHF VHGC DVTFDH+ V+AP DSPNTD IH+S SSG+NI+HS   TGDDCISLGP
Sbjct: 225 NSKFFHFGVHGCSDVTFDHIRVMAPRDSPNTDGIHISKSSGINIVHSRFDTGDDCISLGP 284

Query: 243 GSKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFSS 302
           GS+FIN+T++ CGPGHGISIGSLGKYPNEEDVS+V VR+STFVGT NGVRIKTWSSS  S
Sbjct: 285 GSRFINITNIHCGPGHGISIGSLGKYPNEEDVSDVLVRDSTFVGTDNGVRIKTWSSSHPS 344

Query: 303 VVSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIRDVRYEGIR 362
            V+KI F+NL+MKDV+NP+I++QKYCLDC         DK     V   +IRDVRYEGIR
Sbjct: 345 FVTKIVFLNLEMKDVRNPMIIDQKYCLDCSR-------DKMSTSRV---QIRDVRYEGIR 404

Query: 363 GTSATQVAVNFECSQVFPCQGIVLQDINLSFNGGGQPTSICHNVKGSAFGKQLPSSCL 421
           GTSATQ AVNFECSQVFPC+GIVLQDINLSFNGGGQPTSICHNVKGSAFGKQLPSSCL
Sbjct: 405 GTSATQAAVNFECSQVFPCEGIVLQDINLSFNGGGQPTSICHNVKGSAFGKQLPSSCL 405

[Close]

BLAST of CmoCh16G009670 vs. NCBI nr
Match: XP_038904214.1 (exopolygalacturonase-like [Benincasa hispida])

HSP 1 Score: 514.6 bits (1324), Expect = 8.0e-142
Identity = 258/419 (61.58%), Postives = 310/419 (73.99%), Query Frame = 0


Query: 3   VFNIIQFGAIPDEKTDNTKFLKFKSIRNIILKIPFSKWDTIHFLKSMKQIFKTIFFFGLF 62
           VF+I+QFGA PD  TDN+K                                         
Sbjct: 30  VFDIMQFGAKPDAITDNSK----------------------------------------- 89

Query: 63  ISIINSALSSTWREACGHNGGGVVLV-LEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVA 122
                 ALS+ W EACG++GGGVVL+  +GRFLVLPL+L+GPC G I + + GELL PV 
Sbjct: 90  ------ALSNAWSEACGNSGGGVVLIPAQGRFLVLPLLLQGPCHGFIHIQLDGELLAPVN 149

Query: 123 KNFAIGEYWLSIYQVDNFFVEGPGGLNGGGSSTWSSNTSKRPITMKLFNVNTATIANITS 182
           K FA G+YWLSI QV+N F++G G LNG GS+ W  +++ RP++MKL N+NTA I NI S
Sbjct: 150 KQFATGDYWLSINQVNNLFIDGLGRLNGRGSTAWPYSSASRPVSMKLTNINTARIRNIKS 209

Query: 183 SNSKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISLG 242
            NSKLFHFAVHGC +V FDHVTVIAP DSPNTD IH+S+SSG+NIMHSVI TGDDCISLG
Sbjct: 210 YNSKLFHFAVHGCHNVMFDHVTVIAPTDSPNTDGIHISSSSGINIMHSVISTGDDCISLG 269

Query: 243 PGSKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSFS 302
           PGSKFIN+T++QCGPGHGISIGSLGKYPNEEDV EVT+R+S F+GT+NGVRIK+WSSS+S
Sbjct: 270 PGSKFINITNIQCGPGHGISIGSLGKYPNEEDVFEVTIRDSIFIGTSNGVRIKSWSSSYS 329

Query: 303 SVVSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIRDVRYEGI 362
           S+VSK+++ NLQM +VKNPI+++Q YC D         C  ++   V   +I+DVRYEGI
Sbjct: 330 SLVSKVSYRNLQMNNVKNPILIDQMYCPD--------SCGPNEMSRV---QIKDVRYEGI 389

Query: 363 RGTSATQVAVNFECSQVFPCQGIVLQDINLSFNGGGQPTSICHNVKGSAFGKQLPSSCL 421
           RGTS TQVAVNFECSQ+FPCQGIVLQDINL FNGGG+ TSICHNV+GSAFG+QLP SCL
Sbjct: 390 RGTSNTQVAVNFECSQIFPCQGIVLQDINLPFNGGGKSTSICHNVRGSAFGQQLPPSCL 390

[Close]

BLAST of CmoCh16G009670 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 260.4 bits (664), Expect = 2.5e-69
Identity = 142/365 (38.90%), Postives = 215/365 (58.90%), Query Frame = 0


Query: 64  SIINSALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKN 123
           S I  AL   +  AC       V++ +G F +  + + GPCK  +++N++G L     K 
Sbjct: 34  SDITQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQGTLKAD-GKA 93

Query: 124 FAIGEYWLSIYQVDNFFVEGPGGLNGGGSSTWSSNT-------SKRPITMKLFNVNTATI 183
               E W+   +++ F + G G  +G G++ W  N         K PI+++   V  A I
Sbjct: 94  IQGKERWVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVENAEI 153

Query: 184 ANITSSNSKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDD 243
            +I+S ++K FH  V G +++TFD+V VIAPA+SPNTD IH+  S GV I++S I TGDD
Sbjct: 154 RDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDD 213

Query: 244 CISLGPGSKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTW 303
           CIS+G G K +++ +V CGPGHGIS+GSLG+Y +E+DV+ +TV N T  GT NG+RIKTW
Sbjct: 214 CISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTW 273

Query: 304 -SSSFSSVVSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIRD 363
            S++ ++  S I F N+ + +V NPI+++Q+YC           C+K K   +   ++ D
Sbjct: 274 PSAACATTASGIHFENIILNNVSNPILIDQEYC-------PWNQCNKQKPSTI---KLVD 333

Query: 364 VRYEGIRGTSATQVAVNFECSQVFPCQGIVLQDINLSFNGG-GQPTSICHNVKGSAFGKQ 420
           + ++ IRGTS  + AV   CS+  PC  + + +INL + G  G PT +C NV     G Q
Sbjct: 334 ISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLVGTQ 387

[Close]

BLAST of CmoCh16G009670 vs. TAIR 10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 259.2 bits (661), Expect = 5.6e-69
Identity = 139/363 (38.29%), Postives = 207/363 (57.02%), Query Frame = 0


Query: 67  NSALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTP-VAKNFA 126
           ++A ++ W+EAC    G  + V +G ++V  L  +GPCKG + L + G    P   K   
Sbjct: 86  SAAFAAAWKEACA--AGSTITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTK 145

Query: 127 IGEYWLSIYQVDNFFVEGPGGL-NGGGSSTWSSNTSKR-------PITMKLFNVNTATIA 186
               W+    + +F + G   + +G GS  W +N   +       PI ++   +  + I 
Sbjct: 146 PHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKIN 205

Query: 187 NITSSNSKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDC 246
           +ITS+NSKLFH  +  C+++T   + + AP +S NTD IH+  S+GVN++ + I TGDDC
Sbjct: 206 SITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDC 265

Query: 247 ISLGPGSKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWS 306
           +S+G G++ + + +V+CGPGHGISIGSLG+YPNE+ V  VTVR      T NGVRIKTW 
Sbjct: 266 VSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWP 325

Query: 307 SSFSSVVSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIRDVR 366
            S   + S I F ++ M +V  P++++Q+YC               K  +  Q ++ DV 
Sbjct: 326 GSPPGIASNILFEDITMDNVSLPVLIDQEYC----------PYGHCKAGVPSQVKLSDVT 385

Query: 367 YEGIRGTSATQVAVNFECSQVFPCQGIVLQDINLSFNG-GGQPTSICHNVKGSAFGKQLP 420
            +GI+GTSAT+VAV   CS+  PC  I L DINL  NG  G   S C N+K    GK +P
Sbjct: 386 IKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVP 436

[Close]

BLAST of CmoCh16G009670 vs. TAIR 10
Match: AT2G33160.1 (glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein )

HSP 1 Score: 258.1 bits (658), Expect = 1.3e-68
Identity = 147/361 (40.72%), Postives = 211/361 (58.45%), Query Frame = 0


Query: 69  ALSSTWREACGHN-GGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFAIG 128
           A +  W EAC  + G   V +  G F +  +   GPCK SI   I+G LL P        
Sbjct: 50  AFTKAWNEACQWSYGRSTVYIPSGIFYLRQVTFSGPCKSSITFFIRGTLLAPRNPYAINQ 109

Query: 129 EYWLSIYQVDNFFVEGPGGLNGGGSSTW-----SSNTSKRPITMKL--FNVNTATIANIT 188
           E W+    VDN  V G G L+G GS +W     + NT+ R + M +    V ++ I  + 
Sbjct: 110 EEWILFKYVDNLTVTGGGLLDGQGSYSWPLNDCNKNTNCRTLAMNIGFAFVKSSKINGLR 169

Query: 189 SSNSKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISL 248
           S NSK+ HF +    D     VT+ AP DSPNTD I +  SS + I +  IGTGDDCI++
Sbjct: 170 SINSKMGHFNLFSVEDFNITGVTITAPGDSPNTDGIKIGKSSHMQIYNVTIGTGDDCIAI 229

Query: 249 GPGSKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSF 308
             G+  ++++DV+CGPGHGIS+GSLG+Y  E++V  +TVRNS   GTT+G+RIKTW+ S 
Sbjct: 230 LDGTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKSV 289

Query: 309 SSV-VSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGEIRDVRYE 368
           S + VS   + N+QM +V NPI+++Q+YC        C    K+   +    +I+DV+Y 
Sbjct: 290 SQISVSNFLYENIQMINVGNPIVIDQQYCPHGQ----CDSPGKYASHV----QIKDVKYN 349

Query: 369 GIRGTSATQVAVNFECSQVFPCQGIVLQDINLSFNG-GGQPTSICHNVKGSAFGKQLPSS 420
            I GTS ++ A+  +CS+ FPCQ + L +INL + G  G  T++C NV GS  GK +P++
Sbjct: 350 NIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLVTALCENVGGSIRGKIVPAN 402

[Close]

BLAST of CmoCh16G009670 vs. TAIR 10
Match: AT1G17150.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 256.9 bits (655), Expect = 2.8e-68
Identity = 147/364 (40.38%), Postives = 213/364 (58.52%), Query Frame = 0


Query: 68  SALSSTWREACGHNGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFAIG 127
           +A ++ W++AC  NG   + +  G F +  +   GPC G I   I G LL P   +    
Sbjct: 50  NAFTNAWKDACRWNGPSKMYIPLGTFYLGGVTFVGPCDGKISFVIDGTLLAPPNNDDIKK 109

Query: 128 EYWLSIYQVDNFFVEGPGGLNGGGSSTWS-------SNTSKRPITMKLFNVNTATIANIT 187
           E W++   ++   V G G L+G G  +WS       +N  K  I M    V  +++  IT
Sbjct: 110 EIWINFRYINYLTVFGDGTLDGQGKKSWSLIDCQKDNNCPKLAINMGFDFVKNSSMNGIT 169

Query: 188 SSNSKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCISL 247
           S NSK  HF        +   V +IAP++SPNTD I ++ SS + I ++ I TGDDCI++
Sbjct: 170 SLNSKAGHFNFLSVDHFSITRVNIIAPSNSPNTDGIKIALSSNMQISNTHISTGDDCIAM 229

Query: 248 GPGSKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSSF 307
             G+   ++ +V+CGPGHGISIGSLGK  +E++V+ + VRNS F GTTNG+RIKTW SS 
Sbjct: 230 LSGNTNFDIYNVKCGPGHGISIGSLGKNKDEKNVNGLMVRNSVFTGTTNGIRIKTWESSA 289

Query: 308 SSV-VSKIAFINLQMKDVKNPIIMNQKYC--LDCDNIYVCLDCDKHKCCLVLQGEIRDVR 367
           S++ +  + + NLQM +V+NPI ++QKYC    C N+      D H        +IR+V 
Sbjct: 290 STIRIINLVYENLQMINVENPIGIDQKYCPYPPCSNM-----GDSHI-------QIRNVT 349

Query: 368 YEGIRGTSATQVAVNFECSQVFPCQGIVLQDINLSFNG-GGQPTSICHNVKGSAFGKQLP 421
            + I GTS  +VAV F+CS+ FPC+ + L DINL+ +G  G  +++C NV GSA GK +P
Sbjct: 350 LKNIWGTSKNKVAVKFQCSKTFPCKDVQLIDINLTHHGVDGPASALCENVDGSATGKMVP 401

[Close]

BLAST of CmoCh16G009670 vs. TAIR 10
Match: AT1G43080.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 256.1 bits (653), Expect = 4.8e-68
Identity = 145/368 (39.40%), Postives = 211/368 (57.34%), Query Frame = 0


Query: 68  SALSSTWREACGH-NGGGVVLVLEGRFLVLPLVLEGPCKGSIDLNIKGELLTPVAKNFAI 127
           +A +S W+ AC   +G   + V +G F +  +   GPCK  I+  I G LL P       
Sbjct: 48  NAFTSVWKRACTRISGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLAPANPRDIK 107

Query: 128 GEYWLSIYQVDNFFVEGPGGLNGGGSSTW-------SSNTSKRPITMKLFNVNTATIANI 187
            + W++   ++N  + G G L+G G  +W       ++N  K  +TM    VN + I +I
Sbjct: 108 QDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDI 167

Query: 188 TSSNSKLFHFAVHGCRDVTFDHVTVIAPADSPNTDAIHVSNSSGVNIMHSVIGTGDDCIS 247
           TS NSK+ HF            VT+ AP DSPNTD I + + S ++I ++ IGTGDDCI+
Sbjct: 168 TSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIA 227

Query: 248 LGPGSKFINMTDVQCGPGHGISIGSLGKYPNEEDVSEVTVRNSTFVGTTNGVRIKTWSSS 307
           +  G+  +++++++CGPGHGIS+GSLGK  +E+DV  +TVR++ F GT++G+RIKTW SS
Sbjct: 228 ILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESS 287

Query: 308 FSS-VVSKIAFINLQMKDVKNPIIMNQKYCLDCDNIYVCLDCDKHKCCLVLQGE----IR 367
            S  VVS   + N+QM DV  PI ++QKYC           C+  K     +GE    I+
Sbjct: 288 ASKIVVSNFIYENIQMIDVGKPINIDQKYCPH-------PPCEHEK-----KGESHVQIQ 347

Query: 368 DVRYEGIRGTSATQVAVNFECSQVFPCQGIVLQDINLSFNG--GGQPTSICHNVKGSAFG 421
           D++ + I GTS   VAVN +CS+ FPC+ + L DINL   G   G  T++C NV GS   
Sbjct: 348 DIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTGLEKGHSTAMCENVDGSVRS 403

The following BLAST results are available for this feature:

BLAST of CmoCh16G009670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6H9K0	6.7e-75	41.27	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
P24548	7.4e-74	39.50	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
P35339	2.8e-73	40.62	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1	[more]
P26216	1.5e-71	39.78	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1	[more]
Q39766	4.5e-71	40.23	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]

BLAST of CmoCh16G009670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EW42	2.4e-160	100.00	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438611 PE=3 SV=...	[more]
A0A6J1F153	2.4e-152	68.11	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438612 PE=3 SV=...	[more]
A0A6J1L832	4.6e-143	62.68	exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111500170 PE=3 SV=1	[more]
A0A0A0L7H9	3.1e-139	68.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063610 PE=3 SV=1	[more]
A0A5D3BB58	8.3e-137	69.08	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of CmoCh16G009670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932247.1	5.0e-160	100.00	exopolygalacturonase-like [Cucurbita moschata]	[more]
XP_022932248.1	5.0e-152	68.11	exopolygalacturonase-like [Cucurbita moschata]	[more]
XP_023552935.1	1.8e-146	75.14	exopolygalacturonase-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007598.1	9.4e-143	62.68	exopolygalacturonase-like [Cucurbita maxima]	[more]
XP_038904214.1	8.0e-142	61.58	exopolygalacturonase-like [Benincasa hispida]	[more]

BLAST of CmoCh16G009670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07840.1	2.5e-69	38.90	Pectin lyase-like superfamily protein	[more]
AT3G07850.1	5.6e-69	38.29	Pectin lyase-like superfamily protein	[more]
AT2G33160.1	1.3e-68	40.72	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family pro...	[more]
AT1G17150.1	2.8e-68	40.38	Pectin lyase-like superfamily protein	[more]
AT1G43080.1	4.8e-68	39.40	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 221..242 e-value: 3600.0 score: 3.3 coord: 274..295 e-value: 2.1 score: 17.3 coord: 194..220 e-value: 100.0 score: 11.7
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 87..408 e-value: 1.0E-80 score: 271.3
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 251..264
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 64..418 e-value: 2.0E-89 score: 302.4
None	No IPR available	PANTHER	PTHR31375:SF246	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 68..419
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 68..419
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 68..420

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G009670.1	CmoCh16G009670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity