CmoCh16G007280 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G007280
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Mitochondrial transcription termination factor family protein
Location	Cmo_Chr16: 3630044 .. 3631237 (+)
RNA-Seq Expression	CmoCh16G007280
Synteny	CmoCh16G007280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTTGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGGAGCCGCAGAGGCCTTGAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGTTATGCAGCGATGTTCTGATATGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAGTTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATATTGTTTCTATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATTCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGGTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTTGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGGCTATTGGAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCATAGGTTTCCTGATCATGTGACAGAATTGTTGGCAGCCTTTAGAGGTCAATGCATGGATGAATTGCAGCCTAAGGAGTTGGAAACACGAAGACATGGCCAGAACTAG

mRNA sequence

ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTTGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGGAGCCGCAGAGGCCTTGAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGTTATGCAGCGATGTTCTGATATGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAGTTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATATTGTTTCTATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATTCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGGTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTTGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGGCTATTGGAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCATAGGTTTCCTGATCATGTGACAGAATTGTTGGCAGCCTTTAGAGGTCAATGCATGGATGAATTGCAGCCTAAGGAGTTGGAAACACGAAGACATGGCCAGAACTAG

Coding sequence (CDS)

ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTTGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGGAGCCGCAGAGGCCTTGAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGTTATGCAGCGATGTTCTGATATGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAGTTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATATTGTTTCTATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATTCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGGTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTTGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGGCTATTGGAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCATAGGTTTCCTGATCATGTGACAGAATTGTTGGCAGCCTTTAGAGGTCAATGCATGGATGAATTGCAGCCTAAGGAGTTGGAAACACGAAGACATGGCCAGAACTAG

Protein sequence

MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDKFVHRFPDHVTELLAAFRGQCMDELQPKELETRRHGQN

Homology

[Close]

BLAST of CmoCh16G007280 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.0e-08
Identity = 44/161 (27.33%), Postives = 82/161 (50.93%), Query Frame = 0


Query: 75  KPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFIS 134
           K + V ++L +LG  K+ I + +   PQI   ++   LKP + F + LG+  +   + IS
Sbjct: 231 KIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIIS 290

Query: 135 KHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNISYL 194
           +   +LT S +K L  +VE L      +E    + +++ RC +++  S   +L   + Y 
Sbjct: 291 RFPAILTYSRQK-LTSTVEFLSQTGLTEE---QIGRILTRCPNIMSYSVEDKLRPTMEYF 350

Query: 195 QSCGIVGSQLSMLLKRQPALFGMR-ESQVRDIVSMVVETGF 235
           +S  +    +++LL R P  FG+  ES ++ +    +E GF
Sbjct: 351 RSLNV---DVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGF 384

[Close]

BLAST of CmoCh16G007280 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.3e-07
Identity = 50/285 (17.54%), Postives = 120/285 (42.11%), Query Frame = 0


Query: 79  VYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHST 138
           V KYL  L    + +   +   P++    +E T+   + +   +G+   ++G  ++++  
Sbjct: 218 VVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPE 277

Query: 139 LLTVSLEKRLMPSVEILKSV-FPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNISYLQSC 198
           +L + + + + P VE L+ +  P+        +++++   +L       +  N+  LQ  
Sbjct: 278 ILGMRVARIIKPLVEYLEVLGIPR----LAAARLIEKRPHILGFELDDTVKPNVQILQDF 337

Query: 199 GIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTK---MFVHGLHSISSVSNA 258
            +  + L  ++ + P + G+      D    ++ +    N +     +  +    S+S +
Sbjct: 338 NVRETSLPSIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSES 397

Query: 259 TFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVSRSDIVCKPT 318
              K ++ +   G +  +   M    P ++  ++G +K   E+F  E +    D+V  P 
Sbjct: 398 PMLKHIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPA 457

Query: 319 CLMHAMQGRVLPRYRVLQVVKSKRLLEK--HPQLLDILGMSDEDF 358
              + ++  V PR+        K++++K     L  +L  SDE F
Sbjct: 458 FFTYGLESTVKPRH--------KKIIKKGIKCSLAWMLNCSDEKF 490

[Close]

BLAST of CmoCh16G007280 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-06
Identity = 51/210 (24.29%), Postives = 93/210 (44.29%), Query Frame = 0


Query: 69  GLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSD 128
           G    E+ + + KY   LG  K  ++  + + P +   ++E+T+ PK+ F Q +G+    
Sbjct: 381 GCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEA 440

Query: 129 LGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYTRLL 188
           +G  + K  +LLT SL K++ P V  L  +        D+ +V+     +L  S  T+L 
Sbjct: 441 IGNMLVKFPSLLTNSLYKKIRPVVIFL--LTRAGVTQKDIGKVIAMDPALLGCSIGTKLE 500

Query: 189 VNISYLQSCGIVGSQLSMLLKRQPALFG------------MRESQVRDIVSMV-VETGFS 248
            N+ Y  S GI   QL  ++   P L              +R + +R +  ++     FS
Sbjct: 501 PNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFS 560

Query: 249 TNTKMFVHGLHSISSVSNATFKKKVELICS 266
            + +  +   H+I   +   FK +  L C+
Sbjct: 561 YSLERRIIPRHTIMVENRVNFKLRYMLACT 588

[Close]

BLAST of CmoCh16G007280 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 8.1e-06
Identity = 71/325 (21.85%), Postives = 138/325 (42.46%), Query Frame = 0


Query: 40  ASYGIVVQYLIDTFEL-SPARAVSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIR 99
           +++G+   + +  +E   P+  +++  ++  L+          YL  +G     I+  + 
Sbjct: 192 STFGLKESHFVQMYERHMPSLQINVFSAQERLD----------YLLSVGVKHRDIKRMLL 251

Query: 100 LAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVE-ILKS 159
             PQI    +E  LK  I F   LG+  S +G+ ++   +L + S+E  L P++  +++ 
Sbjct: 252 RQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEE 311

Query: 160 VFPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGM 219
           V  K+   +D+ +V+Q    +L              +Q   I  +   M L ++  L   
Sbjct: 312 VGIKE---TDVGKVVQLSPQIL--------------VQRLDITWNTRYMFLSKE--LGAP 371

Query: 220 RESQVRDIVSMVVETGFSTNTKMFVHGLHSISSVSNATFKKKVELICSFGITEKECMRMF 279
           R+S    +V MV         K     LH   S+ +  F  ++  + S G+   + +++ 
Sbjct: 372 RDS----VVKMV---------KKHPQLLH--YSIDDG-FLPRINFLRSIGMCNSDILKVL 431

Query: 280 TSAPGLIRTSV-GKLKRGLEFFMNEAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKS 339
           TS   ++  S+   LK    + +NE       +   P  L  ++  R+ PR+R L  +K 
Sbjct: 432 TSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKK 468

Query: 340 KRLLEKHPQLLDILGMSDEDFLDKF 362
            R   K P  L  L  +DE F  ++
Sbjct: 492 VR---KGPFPLSSLVPNDESFCQQW 468

[Close]

BLAST of CmoCh16G007280 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.2e-04
Identity = 37/142 (26.06%), Postives = 64/142 (45.07%), Query Frame = 0


Query: 74  EKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGL-VGSDLGRF 133
           EK   +  +   LG  +  +   I   P++   +I+  L   + F  +LGL     +G+ 
Sbjct: 112 EKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKV 171

Query: 134 ISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNIS 193
           + K+  L+  S++KRL P+ E LKS     E    +  V+     +L R     L  N  
Sbjct: 172 LVKNPFLMGYSVDKRLRPTTEFLKSSVGLSE--DGIKSVVMNFPQLLCRDVNKILKPNYD 231

Query: 194 YLQSCGIVGSQLSMLLKRQPAL 215
           YL+ CG   SQ++ ++   P +
Sbjct: 232 YLKECGFGDSQIATMVTGYPQI 251

[Close]

BLAST of CmoCh16G007280 vs. ExPASy TrEMBL
Match: A0A6J1EN21 (uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC111435860 PE=4 SV=1)

HSP 1 Score: 774.2 bits (1998), Expect = 2.6e-220
Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180
           NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180

Query: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300
           FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELETRRHGQN 398
           FVHRFPDHVTELLAAFRGQCMDELQPKELETRRHGQN
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELETRRHGQN 397

[Close]

BLAST of CmoCh16G007280 vs. ExPASy TrEMBL
Match: A0A6J1END2 (uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC111436067 PE=3 SV=1)

HSP 1 Score: 727.2 bits (1876), Expect = 3.6e-206
Identity = 373/391 (95.40%), Postives = 382/391 (97.70%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRG+ESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180
           N GLVGSDLGRFISKHSTLLTVSLEK+LMPSVEILKSVFPKDECNSDLLQ MQRC D LM
Sbjct: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRLLVNI+YLQSCGIVGSQLSMLLKRQPALFG RESQVR+IVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300
           FVHGLH+ISSV+NATFKKKVELICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIV KPTCLMHAMQGRVLPRYRVLQVVKSK LL+KHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 392
           FVHRFPDHV ELLAAFRGQCMDELQPK+LET
Sbjct: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 391

[Close]

BLAST of CmoCh16G007280 vs. ExPASy TrEMBL
Match: A0A6J1JB80 (uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 2.6e-204
Identity = 369/391 (94.37%), Postives = 382/391 (97.70%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNP SLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIM SRRG+ STEKPQSVYKYLSELGFS+AHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180
           NLGLVGSDLGRFISKHSTLLT+SLEKRLMPSVEILKSVFPKDECNSDLLQV++RCSDMLM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLM 180

Query: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRL VNI+YLQSCGIVGSQLSMLLKRQPALFGMRESQVRD+VSMVVETGFSTNT+M
Sbjct: 181 RSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRM 240

Query: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300
           FVHGLH+ISSVSNATFKKKVELICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIV KPTCLMHAMQGRVLPRYRVLQVV SKRL +KH QL+DILGMSDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 392
           FVHRFPDHVTELLAAFRGQCMDELQPKELET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of CmoCh16G007280 vs. ExPASy TrEMBL
Match: A0A6J1J5Y4 (uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 7.7e-201
Identity = 365/387 (94.32%), Postives = 375/387 (96.90%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNP SLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIM SRRG+ STEKPQSVYKYLSELGFS+AHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180
           NLGLVGSDLG FISKHSTLLT+SLEKRLMPSVEILKSVFPKDECNSD LQVM+RCSDML 
Sbjct: 121 NLGLVGSDLGWFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDFLQVMRRCSDMLK 180

Query: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRLLVNI+YLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300
           FVHGLH+ISSVSNATFKKKVELICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIV KPTCLMHAMQGRVLPRYRVLQVV SKRL +KH QL+DILGMSDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPK 388
           FVHRFPD VTELLAAFRGQCMDELQPK
Sbjct: 361 FVHRFPDQVTELLAAFRGQCMDELQPK 387

[Close]

BLAST of CmoCh16G007280 vs. ExPASy TrEMBL
Match: A0A6J1C8W1 (uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008506 PE=3 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 1.8e-157
Identity = 293/397 (73.80%), Postives = 342/397 (86.15%), Query Frame = 0


Query: 1   MYALRSSFSISSRH-NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPAR 60
           MYALRS FS+S+RH +P       PL Y F SSSS  +ASA+  IVVQYL+D F LS AR
Sbjct: 1   MYALRSIFSLSARHCHPID----PPLCYFFSSSSSRREASAANAIVVQYLVDNFNLSTAR 60

Query: 61  AVSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFF 120
           A++IM  R+G+ESTEKP+SV KYLSELGFS AHIQS IR++PQIAFS++E+TLKPKIEFF
Sbjct: 61  ALAIMSCRKGVESTEKPRSVCKYLSELGFSDAHIQSAIRISPQIAFSSVEKTLKPKIEFF 120

Query: 121 QNLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDML 180
           QNLGLVGSDLG+FIS HS+LLTVSL+ +L PSVEILK+VFPKDE NS+LLQVM+RCSD+L
Sbjct: 121 QNLGLVGSDLGKFISNHSSLLTVSLKNKLRPSVEILKNVFPKDEDNSNLLQVMRRCSDIL 180

Query: 181 MRSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTK 240
           MR P +RLLVNI+Y +SCGIV SQLSMLLKRQP LFG RES+VRD+VSM VETGFSTNTK
Sbjct: 181 MRCPESRLLVNINYFRSCGIVDSQLSMLLKRQPVLFGRRESRVRDLVSMAVETGFSTNTK 240

Query: 241 MFVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFM 300
           MFVHGLH+ISSVSNATFKKKVELICSFG TEKECM+MFTSAP LIRTS+ KLK G+EFFM
Sbjct: 241 MFVHGLHAISSVSNATFKKKVELICSFGFTEKECMKMFTSAPVLIRTSIAKLKTGIEFFM 300

Query: 301 NEAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLD 360
           NEA+VSRS IV +PT LMH+MQGRVLPRYRVLQVVKSKRL  K+P+L+D LG+S+EDF D
Sbjct: 301 NEAKVSRSLIVRRPTSLMHSMQGRVLPRYRVLQVVKSKRLTRKNPELVDTLGISEEDFFD 360

Query: 361 KFVHRFPDHVTELLAAFRGQCMDELQPKELETRRHGQ 397
           KFV+RFPD+V +LL A+ GQC+D L+ KEL  +R  +
Sbjct: 361 KFVYRFPDNVEDLLVAYSGQCVDALRRKELAAQRRAR 393

[Close]

BLAST of CmoCh16G007280 vs. NCBI nr
Match: XP_022929189.1 (uncharacterized protein LOC111435860 [Cucurbita moschata])

HSP 1 Score: 774.2 bits (1998), Expect = 5.3e-220
Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180
           NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180

Query: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300
           FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELETRRHGQN 398
           FVHRFPDHVTELLAAFRGQCMDELQPKELETRRHGQN
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELETRRHGQN 397

[Close]

BLAST of CmoCh16G007280 vs. NCBI nr
Match: XP_023552363.1 (transcription termination factor MTEF1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 741.5 bits (1913), Expect = 3.8e-210
Identity = 381/391 (97.44%), Postives = 386/391 (98.72%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSR+NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIM SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ
Sbjct: 61  VSIMSSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180
           NLGLVGSDLGRF+SKHSTLLT+SLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM
Sbjct: 121 NLGLVGSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180

Query: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRLLVNI+YLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300
           FVHGLHSISSVSNATFKKKV LICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIV KPTCLMHAMQGRVLPRYRVLQVVKS RLL+KHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 392
           FVHRFPDHVTELLAAFRGQCMDELQP ELET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPMELET 391

[Close]

BLAST of CmoCh16G007280 vs. NCBI nr
Match: KAG7015351.1 (Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 736.5 bits (1900), Expect = 1.2e-208
Identity = 378/391 (96.68%), Postives = 386/391 (98.72%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRG++STEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180
           NLGLVGSDLGRFISKHSTLLTVSLEK+LMPSVEILKSVFPKDECNSDLLQVMQRCSD LM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180

Query: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRLLVNI+YLQSCGIVGSQLSMLLKRQPALFG RESQVRDIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300
           FVHGLH+ISSV+NATF+KKVELICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIV KPTCLMHAMQGRVLPRYRVLQVVKSK LL+KHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 392
           FVHRFPDHVTELLAAFRGQCMDELQPKELET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of CmoCh16G007280 vs. NCBI nr
Match: XP_022929526.1 (uncharacterized protein LOC111436067 [Cucurbita moschata])

HSP 1 Score: 727.2 bits (1876), Expect = 7.4e-206
Identity = 373/391 (95.40%), Postives = 382/391 (97.70%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRG+ESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180
           N GLVGSDLGRFISKHSTLLTVSLEK+LMPSVEILKSVFPKDECNSDLLQ MQRC D LM
Sbjct: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240
           RSPYTRLLVNI+YLQSCGIVGSQLSMLLKRQPALFG RESQVR+IVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300
           FVHGLH+ISSV+NATFKKKVELICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIV KPTCLMHAMQGRVLPRYRVLQVVKSK LL+KHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 392
           FVHRFPDHV ELLAAFRGQCMDELQPK+LET
Sbjct: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 391

[Close]

BLAST of CmoCh16G007280 vs. NCBI nr
Match: XP_023552360.1 (uncharacterized protein LOC111810052 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552361.1 uncharacterized protein LOC111810052 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 725.3 bits (1871), Expect = 2.8e-205
Identity = 373/391 (95.40%), Postives = 382/391 (97.70%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSR+NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRG+ESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180
           NLGLVGSDLGRFISKHSTLLTVSLEK+LMPSVEIL+SVFPKDECNSDLLQ MQRC D LM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILQSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240
           R PYTRLLVNI+YLQSCGIVGSQLSMLLKRQPALFG RESQVRDIVSMVVETGFSTNTKM
Sbjct: 181 RFPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300
           FVHGLH+ISSV+NATFKKKVELICSFGITEKECMRMFTSAP LIRTS GKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSGGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIV KPTCLMHAM+GRVLPRYRVLQVVKSKRLL KHPQL+DILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMEGRVLPRYRVLQVVKSKRLLMKHPQLIDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 392
           FVHRFPDHVTELLAAFRGQCMDELQPKELET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of CmoCh16G007280 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 256.5 bits (654), Expect = 3.4e-68
Identity = 150/368 (40.76%), Postives = 232/368 (63.04%), Query Frame = 0


Query: 21  RIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGLESTEKPQSVY 80
           R D  L     SS+ + AS S    V++L D     P  A++I      L+S E+P+SV 
Sbjct: 17  RWDRALSLHHFSSNATPASISNPAFVEFLRDNGFQKPL-AIAIAMRYPNLKSLEQPRSVI 76

Query: 81  KYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLL 140
           + L    FS   IQ +IR+ P++ F N+E+ L+PK+ FF+++G  GS LG+F+S++S+++
Sbjct: 77  QMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVV 136

Query: 141 TVSLEKRLMPSVEILKS-VFPKDECNSDLLQVMQRCSDMLM-RSPYTRLLVNISYLQSCG 200
            VSL K+L+P+VEILKS V PK E   DL  ++ RC  +L+ R P   LL NISYL++CG
Sbjct: 137 GVSLVKKLIPTVEILKSIVAPKHE---DLPVILSRCGWLLLSRDPNLFLLPNISYLETCG 196

Query: 201 IVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGLHSISSVSNATFKK 260
           IVGSQL+ LL+RQP +F + E ++R  VS  ++ GF+ N++M VH + S+SS+S  TF +
Sbjct: 197 IVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDR 256

Query: 261 KVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVSRSDIVCKPTCLMH 320
           KV+L  + G +E E   +   +PGLIR S  KL  G EF++    + R  +  +P  L +
Sbjct: 257 KVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSY 316

Query: 321 AMQGRVLPRYRVLQVVKSKRLL----EKHPQLLDILGMSDEDFLDKFVHRFPDHVT-ELL 380
            ++ RV+PR +VLQ+++ K LL    +K   ++ I+ M++E FL+K+V RF D +  ELL
Sbjct: 317 NLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEELL 376

Query: 381 AAFRGQCM 382
            A++  C+
Sbjct: 377 VAYKCVCL 380

[Close]

BLAST of CmoCh16G007280 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 150.2 bits (378), Expect = 3.5e-36
Identity = 96/334 (28.74%), Postives = 172/334 (51.50%), Query Frame = 0


Query: 46  VQYLIDTFELSPARAVSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAF 105
           + YLID+  LSP  A ++   +  L+S E+P +V   L + GF+ A I S ++  P +  
Sbjct: 72  LNYLIDSCGLSPDSA-TVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLL 131

Query: 106 SNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECN 165
           +N E  L PK+ FF ++G+  S L R ++   T+LT SL  +L+PS   LKSV   DE  
Sbjct: 132 ANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE-- 191

Query: 166 SDLLQVMQRCSDMLMRSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDI 225
             ++  ++R + + +      L+ NI+Y+   G+    + +LL   P     +  + + I
Sbjct: 192 -KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAI 251

Query: 226 VSMVVETGFSTNTKMFVHGLHSISSVSN-ATFKKKVELICSFGITEKECMRMFTSAPGLI 285
                E GF+     FV  +H++S   N + + K  E+   +G +E + M  F   P  +
Sbjct: 252 AKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCM 311

Query: 286 RTSVGKLKRGLEFFMNEAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHP 345
             S  K+ R +E+F+NE  ++   I   P  L  +++ R++PR  V +V+ S  L+++  
Sbjct: 312 MLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDW 371

Query: 346 QLLDILGMSDEDFLDKFVHRFPDHVTELLAAFRG 379
            L  +L   ++ FL+K V ++ + + EL+  + G
Sbjct: 372 SLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of CmoCh16G007280 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 146.7 bits (369), Expect = 3.8e-35
Identity = 95/347 (27.38%), Postives = 169/347 (48.70%), Query Frame = 0


Query: 31  SSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGLESTEKPQSVYKYLSELGFSK 90
           S +   Q        V YL+D+  LS   A S  R  + L S++KP SV     + GF+ 
Sbjct: 44  SENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVK-LVSSKKPDSVLALFKDHGFTN 103

Query: 91  AHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVSLEKRLMP 150
             I S I+  P++   + E  + PK+ FF ++G   SD  + IS    +L+ SL KRL+P
Sbjct: 104 DQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIP 163

Query: 151 SVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNISYLQSCGIVGSQLSMLLKR 210
             + LKS+  ++E     L+   RC  + +    +   + +S  +  G+    +  L++ 
Sbjct: 164 CYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVS---LRVSICRELGVPDKSIKWLVQA 223

Query: 211 QPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGLHSISSVSNATFKKKVELICSFGITE 270
            P  F  RE +  ++++ V   GF      FVH + +    S +  ++K +L   FG ++
Sbjct: 224 SPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSK 283

Query: 271 KECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVSRSDIVCKPTCLMHAMQGRVLPRYRV 330
           ++ +      P  +  S  K+   LE+ +N   +   DIV +P  L  +M+ R+ PR +V
Sbjct: 284 EDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQV 343

Query: 331 LQVVKSKRLLEKHP-QLLDILGMSDEDFLDKFVHRFPDHVTELLAAF 377
           + ++ SK L++K       IL +   +F+DKFV ++ D + +L+  F
Sbjct: 344 ISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386

[Close]

BLAST of CmoCh16G007280 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 102.1 bits (253), Expect = 1.1e-21
Identity = 97/393 (24.68%), Postives = 168/393 (42.75%), Query Frame = 0


Query: 29  FFSSSSHSQASASYG-----IVVQYLIDTFELSPARAVSIMRSRRGLESTEKPQSVYKYL 88
           FFSS+S +  S   G       V YL+D+  L+   A SI R +   E    P SV   L
Sbjct: 33  FFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESISR-KVSFEDKNNPDSVLNLL 92

Query: 89  SELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVS 148
           +  GF+ + I + IR  PQ+  ++ E++L PK++F Q+ G   S++   +S    +L   
Sbjct: 93  TSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKK 152

Query: 149 LEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNISYLQSCGIVGSQ 208
             K +    + +K    +    ++ L         L +      + N+S L+  G+    
Sbjct: 153 GHKTISVYYDFIKDTLLEKSSKNEKL------CHSLPQGNLENKIRNVSVLRELGMPHKL 212

Query: 209 L-SMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGLHSISSVSNATFKKKVEL 268
           L S+L+     + G  + +  + +  VVE GF   T  FV  L  I  ++  T ++KV L
Sbjct: 213 LFSLLISDSQPVCG--KEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHL 272

Query: 269 ICSFG------------------ITEK-----------------ECMRMFTSAPGLIRTS 328
             S G                  ++EK                 E  +M    P  I  S
Sbjct: 273 YKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLS 332

Query: 329 VGKLKRGLEFFMNEAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKH-PQL 378
              +K+  EF + +       +V  P    ++++ R++PR  V++ + SK L+    P +
Sbjct: 333 TETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSI 392

[Close]

BLAST of CmoCh16G007280 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 102.1 bits (253), Expect = 1.1e-21
Identity = 97/393 (24.68%), Postives = 168/393 (42.75%), Query Frame = 0


Query: 29  FFSSSSHSQASASYG-----IVVQYLIDTFELSPARAVSIMRSRRGLESTEKPQSVYKYL 88
           FFSS+S +  S   G       V YL+D+  L+   A SI R +   E    P SV   L
Sbjct: 33  FFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESISR-KVSFEDKNNPDSVLNLL 92

Query: 89  SELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVS 148
           +  GF+ + I + IR  PQ+  ++ E++L PK++F Q+ G   S++   +S    +L   
Sbjct: 93  TSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKK 152

Query: 149 LEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNISYLQSCGIVGSQ 208
             K +    + +K    +    ++ L         L +      + N+S L+  G+    
Sbjct: 153 GHKTISVYYDFIKDTLLEKSSKNEKL------CHSLPQGNLENKIRNVSVLRELGMPHKL 212

Query: 209 L-SMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGLHSISSVSNATFKKKVEL 268
           L S+L+     + G  + +  + +  VVE GF   T  FV  L  I  ++  T ++KV L
Sbjct: 213 LFSLLISDSQPVCG--KEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHL 272

Query: 269 ICSFG------------------ITEK-----------------ECMRMFTSAPGLIRTS 328
             S G                  ++EK                 E  +M    P  I  S
Sbjct: 273 YKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLS 332

Query: 329 VGKLKRGLEFFMNEAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKH-PQL 378
              +K+  EF + +       +V  P    ++++ R++PR  V++ + SK L+    P +
Sbjct: 333 TETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSI 392

The following BLAST results are available for this feature:

BLAST of CmoCh16G007280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	3.0e-08	27.33	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9ZT96	3.3e-07	17.54	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	1.6e-06	24.29	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FM80	8.1e-06	21.85	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	1.2e-04	26.06	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of CmoCh16G007280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EN21	2.6e-220	100.00	uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC1114358...	[more]
A0A6J1END2	3.6e-206	95.40	uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC1114360...	[more]
A0A6J1JB80	2.6e-204	94.37	uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J5Y4	7.7e-201	94.32	uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1C8W1	1.8e-157	73.80	uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CmoCh16G007280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929189.1	5.3e-220	100.00	uncharacterized protein LOC111435860 [Cucurbita moschata]	[more]
XP_023552363.1	3.8e-210	97.44	transcription termination factor MTEF1, chloroplastic-like [Cucurbita pepo subsp...	[more]
KAG7015351.1	1.2e-208	96.68	Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyr...	[more]
XP_022929526.1	7.4e-206	95.40	uncharacterized protein LOC111436067 [Cucurbita moschata]	[more]
XP_023552360.1	2.8e-205	95.40	uncharacterized protein LOC111810052 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of CmoCh16G007280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64950.1	3.4e-68	40.76	Mitochondrial transcription termination factor family protein	[more]
AT5G07900.1	3.5e-36	28.74	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	3.8e-35	27.38	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	1.1e-21	24.68	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	1.1e-21	24.68	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 306..337 e-value: 1000.0 score: 3.8 coord: 274..305 e-value: 51.0 score: 12.7 coord: 239..269 e-value: 1100.0 score: 3.7 coord: 94..125 e-value: 0.65 score: 19.0 coord: 205..235 e-value: 3.6 score: 16.6 coord: 169..200 e-value: 150.0 score: 10.4 coord: 130..162 e-value: 6.0 score: 15.8
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 166..263 e-value: 2.8E-7 score: 29.8 coord: 250..358 e-value: 1.1E-15 score: 57.4 coord: 81..158 e-value: 1.3E-10 score: 40.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 31..378
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 166..370 e-value: 2.8E-38 score: 133.6 coord: 50..165 e-value: 1.1E-19 score: 72.6
None	No IPR available	PANTHER	PTHR13068:SF173	EMB\|CAB62602.1	coord: 31..378

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G007280.1	CmoCh16G007280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding