CmoCh16G007190 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G007190
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Plus3 domain-containing protein
Location	Cmo_Chr16: 3594325 .. 3596298 (-)
RNA-Seq Expression	CmoCh16G007190
Synteny	CmoCh16G007190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGATCTAGAAAATTTACTTCTTGAGGCTGCGGGAAGAACTAAGGCATCAGGGAGAAATCGACACTCTCATCCACCATCACGAAGACAGCGCGAAGGTTCATATTCTGATGCTGGAAGTGACTCGAGGGATGATGACTCTGATGATGAACGTGGTTATGCGAGCAGGAAGCCATCTGGATCTCAGGTTCCTCTGAAGAAGAGGTTAGATCCTAATGAGAGGGATGATGATGTGGGCAGCCCAGAAGAAGGGGAAGACGAAGATGTTGGTTCAGAACATGAGGGTGACAGTAGTGATGAATCTGATGTTGGGGATGATCTTTACAAAGATGACGATGACAGGCGTAAGCTTGCTGGTATGTCTGAACTTCAAAGGGAGATGATTCTTTCAGACAGAGCATCGAAGAAGAATGATAAGCATTTATATGAAAGCTTGAGATCTAAGATGGATAAAGGGAAGGCTGCCCCGTCTCGGAAAGAAAATCCTCCTCTCCCATCATCTCGTATTAGATCGTCAGCCCGATCTGCTGATAGAGCAGCTGCAAAAGATGATGCTTTAAATGAATTGCGTGCAAAAAGGTTGAAGCAGCAGGACCCCGAGGCTCACCGCAAATTGAGAGATACATCTAGAGGAAACGCAAATAATCGAAGGTTCTCACCAACAAAGCGAAAGCCCTTCACTGCTCCTAGTTTGAGTAGCTCAAGCCAAAGTGAAAGTGAAAGTAGGTTTCAAAGTGACGATGAAGGATCTACAGGAGATGGTGGAATGATTGACAGTGACGATGAAAGAACCATGCCTGGTTCAAATGGGCCAACATTTGATGATATCAAGGAAATTACTATTCGTAGATCAAAGCTTGCAAAATGGTTAATGGAGCCATTCTTTGAGGAGTTGATAGTTGGATGCTTTGTGAGAGTCGGAATTGGGAGATCAAGATCCGGGCCTATCTACAGGCTCTGCTTGGTGCGCAATGTTGATGCAACAGAACCCGATCGTCAGTATAAACTCGAGAACAAAATCACGCATAAATATCTTAATGTTATTTGGGGAAATGAAAGTTCTGCTGCCAGATGGCAAATGGCTATGGTTTCGGACTCTGGTCCACTCGAGGATGAATATAAACAGTGGGTGAAGGAAGTAGAGCGAACGGGCGGTCGGATGCTGAGCAAGCAGGATATCTTGGAAAAGAAGGAAGCTATACAGAAAGCCAACAACTTCGTGTACTCAGCAGCCACAGTGAAGCAGATGTTGCAGGAGAAAAAATCTGCCTCATCAAGGCCATTAAATATTGCAGCCGAGAAGGACCGACTGAGGAATCAGATGGACGTAGCACTAAGCAAAAACAATGAAGCCGAGGTGGAGAGGATCAAAGCAAAACTGCGCCAATTAGACGCATCCAGGAGGTCACAAATGAAAGATGCCAAGGCTATTAGGTTATCTGAGATGAACAGGAAGAATAGAGTGGAAAACTTCAAGAACGCATCAGAACTAAGACCCACGAAAGATTTGAAAGCCGGTGAGGCTGGTTATGATCCCTTCTCTAGGAGATGGACGAGGTCGAGGAATTATTATGTTTCAAACGCTGGTCAAGTCGATGGGGCTGCCGAGGCAGCTGGCAACAGTGACAATATAACTCCTGCATCAGTGACTACTGGAACAGGATCTGGAGAAGCTGGCGTGGCAGCTACCGCAGCAGCTTTGGAAGCTGCTGCTGGTGCTGGAAAGTTGGTCGATACTAACGCTCCAGTAGATGGAGGAACAGAATCGAACTTGCTGCACAACTTCGAGCTGCCTATATCATTGACTGTGCTTCAGAAATTTGGTGGCGCTCTGGGAGCTCAGGCTGGGTTCTTAGCAAGGAAACAAAGGATAGAAGCCACAGTTGGGCGTCAAGTCCCTGAGAACGATGGTAGGCGGCATGCACTGACACTCACGGTTAGCGACTACAAGAGAAGAAGAGGGCTTCTTTGA

mRNA sequence

ATGGCAGATCTAGAAAATTTACTTCTTGAGGCTGCGGGAAGAACTAAGGCATCAGGGAGAAATCGACACTCTCATCCACCATCACGAAGACAGCGCGAAGGTTCATATTCTGATGCTGGAAGTGACTCGAGGGATGATGACTCTGATGATGAACGTGGTTATGCGAGCAGGAAGCCATCTGGATCTCAGGTTCCTCTGAAGAAGAGGTTAGATCCTAATGAGAGGGATGATGATGTGGGCAGCCCAGAAGAAGGGGAAGACGAAGATGTTGGTTCAGAACATGAGGGTGACAGTAGTGATGAATCTGATGTTGGGGATGATCTTTACAAAGATGACGATGACAGGCGTAAGCTTGCTGGTATGTCTGAACTTCAAAGGGAGATGATTCTTTCAGACAGAGCATCGAAGAAGAATGATAAGCATTTATATGAAAGCTTGAGATCTAAGATGGATAAAGGGAAGGCTGCCCCGTCTCGGAAAGAAAATCCTCCTCTCCCATCATCTCGTATTAGATCGTCAGCCCGATCTGCTGATAGAGCAGCTGCAAAAGATGATGCTTTAAATGAATTGCGTGCAAAAAGGTTGAAGCAGCAGGACCCCGAGGCTCACCGCAAATTGAGAGATACATCTAGAGGAAACGCAAATAATCGAAGGTTCTCACCAACAAAGCGAAAGCCCTTCACTGCTCCTAGTTTGAGTAGCTCAAGCCAAAGTGAAAGTGAAAGTAGGTTTCAAAGTGACGATGAAGGATCTACAGGAGATGGTGGAATGATTGACAGTGACGATGAAAGAACCATGCCTGGTTCAAATGGGCCAACATTTGATGATATCAAGGAAATTACTATTCGTAGATCAAAGCTTGCAAAATGGTTAATGGAGCCATTCTTTGAGGAGTTGATAGTTGGATGCTTTGTGAGAGTCGGAATTGGGAGATCAAGATCCGGGCCTATCTACAGGCTCTGCTTGGTGCGCAATGTTGATGCAACAGAACCCGATCGTCAGTATAAACTCGAGAACAAAATCACGCATAAATATCTTAATGTTATTTGGGGAAATGAAAGTTCTGCTGCCAGATGGCAAATGGCTATGGTTTCGGACTCTGGTCCACTCGAGGATGAATATAAACAGTGGGTGAAGGAAGTAGAGCGAACGGGCGGTCGGATGCTGAGCAAGCAGGATATCTTGGAAAAGAAGGAAGCTATACAGAAAGCCAACAACTTCGTGTACTCAGCAGCCACAGTGAAGCAGATGTTGCAGGAGAAAAAATCTGCCTCATCAAGGCCATTAAATATTGCAGCCGAGAAGGACCGACTGAGGAATCAGATGGACGTAGCACTAAGCAAAAACAATGAAGCCGAGGTGGAGAGGATCAAAGCAAAACTGCGCCAATTAGACGCATCCAGGAGGTCACAAATGAAAGATGCCAAGGCTATTAGGTTATCTGAGATGAACAGGAAGAATAGAGTGGAAAACTTCAAGAACGCATCAGAACTAAGACCCACGAAAGATTTGAAAGCCGGTGAGGCTGGTTATGATCCCTTCTCTAGGAGATGGACGAGGTCGAGGAATTATTATGTTTCAAACGCTGGTCAAGTCGATGGGGCTGCCGAGGCAGCTGGCAACAGTGACAATATAACTCCTGCATCAGTGACTACTGGAACAGGATCTGGAGAAGCTGGCGTGGCAGCTACCGCAGCAGCTTTGGAAGCTGCTGCTGGTGCTGGAAAGTTGGTCGATACTAACGCTCCAGTAGATGGAGGAACAGAATCGAACTTGCTGCACAACTTCGAGCTGCCTATATCATTGACTGTGCTTCAGAAATTTGGTGGCGCTCTGGGAGCTCAGGCTGGGTTCTTAGCAAGGAAACAAAGGATAGAAGCCACAGTTGGGCGTCAAGTCCCTGAGAACGATGGTAGGCGGCATGCACTGACACTCACGGTTAGCGACTACAAGAGAAGAAGAGGGCTTCTTTGA

Coding sequence (CDS)

ATGGCAGATCTAGAAAATTTACTTCTTGAGGCTGCGGGAAGAACTAAGGCATCAGGGAGAAATCGACACTCTCATCCACCATCACGAAGACAGCGCGAAGGTTCATATTCTGATGCTGGAAGTGACTCGAGGGATGATGACTCTGATGATGAACGTGGTTATGCGAGCAGGAAGCCATCTGGATCTCAGGTTCCTCTGAAGAAGAGGTTAGATCCTAATGAGAGGGATGATGATGTGGGCAGCCCAGAAGAAGGGGAAGACGAAGATGTTGGTTCAGAACATGAGGGTGACAGTAGTGATGAATCTGATGTTGGGGATGATCTTTACAAAGATGACGATGACAGGCGTAAGCTTGCTGGTATGTCTGAACTTCAAAGGGAGATGATTCTTTCAGACAGAGCATCGAAGAAGAATGATAAGCATTTATATGAAAGCTTGAGATCTAAGATGGATAAAGGGAAGGCTGCCCCGTCTCGGAAAGAAAATCCTCCTCTCCCATCATCTCGTATTAGATCGTCAGCCCGATCTGCTGATAGAGCAGCTGCAAAAGATGATGCTTTAAATGAATTGCGTGCAAAAAGGTTGAAGCAGCAGGACCCCGAGGCTCACCGCAAATTGAGAGATACATCTAGAGGAAACGCAAATAATCGAAGGTTCTCACCAACAAAGCGAAAGCCCTTCACTGCTCCTAGTTTGAGTAGCTCAAGCCAAAGTGAAAGTGAAAGTAGGTTTCAAAGTGACGATGAAGGATCTACAGGAGATGGTGGAATGATTGACAGTGACGATGAAAGAACCATGCCTGGTTCAAATGGGCCAACATTTGATGATATCAAGGAAATTACTATTCGTAGATCAAAGCTTGCAAAATGGTTAATGGAGCCATTCTTTGAGGAGTTGATAGTTGGATGCTTTGTGAGAGTCGGAATTGGGAGATCAAGATCCGGGCCTATCTACAGGCTCTGCTTGGTGCGCAATGTTGATGCAACAGAACCCGATCGTCAGTATAAACTCGAGAACAAAATCACGCATAAATATCTTAATGTTATTTGGGGAAATGAAAGTTCTGCTGCCAGATGGCAAATGGCTATGGTTTCGGACTCTGGTCCACTCGAGGATGAATATAAACAGTGGGTGAAGGAAGTAGAGCGAACGGGCGGTCGGATGCTGAGCAAGCAGGATATCTTGGAAAAGAAGGAAGCTATACAGAAAGCCAACAACTTCGTGTACTCAGCAGCCACAGTGAAGCAGATGTTGCAGGAGAAAAAATCTGCCTCATCAAGGCCATTAAATATTGCAGCCGAGAAGGACCGACTGAGGAATCAGATGGACGTAGCACTAAGCAAAAACAATGAAGCCGAGGTGGAGAGGATCAAAGCAAAACTGCGCCAATTAGACGCATCCAGGAGGTCACAAATGAAAGATGCCAAGGCTATTAGGTTATCTGAGATGAACAGGAAGAATAGAGTGGAAAACTTCAAGAACGCATCAGAACTAAGACCCACGAAAGATTTGAAAGCCGGTGAGGCTGGTTATGATCCCTTCTCTAGGAGATGGACGAGGTCGAGGAATTATTATGTTTCAAACGCTGGTCAAGTCGATGGGGCTGCCGAGGCAGCTGGCAACAGTGACAATATAACTCCTGCATCAGTGACTACTGGAACAGGATCTGGAGAAGCTGGCGTGGCAGCTACCGCAGCAGCTTTGGAAGCTGCTGCTGGTGCTGGAAAGTTGGTCGATACTAACGCTCCAGTAGATGGAGGAACAGAATCGAACTTGCTGCACAACTTCGAGCTGCCTATATCATTGACTGTGCTTCAGAAATTTGGTGGCGCTCTGGGAGCTCAGGCTGGGTTCTTAGCAAGGAAACAAAGGATAGAAGCCACAGTTGGGCGTCAAGTCCCTGAGAACGATGGTAGGCGGCATGCACTGACACTCACGGTTAGCGACTACAAGAGAAGAAGAGGGCTTCTTTGA

Protein sequence

MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPSGSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAGMSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSESESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRLSEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAGNSDNITPASVTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPISLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL

Homology

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BLAST of CmoCh16G007190 vs. ExPASy Swiss-Prot
Match: Q9C950 (Protein RTF1 homolog OS=Arabidopsis thaliana OX=3702 GN=VIP5 PE=1 SV=1)

HSP 1 Score: 800.4 bits (2066), Expect = 1.5e-230
Identity = 456/659 (69.20%), Postives = 531/659 (80.58%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60
           M DLENLLLEAAGRT ++GR+R  HPPS R+REGSYSD  SDSR DDSD++RGYASRKPS
Sbjct: 1   MGDLENLLLEAAGRTNSAGRSR--HPPSSRRREGSYSDGSSDSR-DDSDEDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRL+  ER+D     E G   D  S+ EGDSS+ESD GDDLYK+++DR+KLAG
Sbjct: 61  GSQVPLKKRLEA-EREDRAARVEGGYG-DGPSDREGDSSEESDFGDDLYKNEEDRQKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSR-IRSSARSADR 180
           M+E QREMILS+RA KK DK+  E LRSK +  K   S+KE  PLP+SR +RSSARSADR
Sbjct: 121 MTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSE 240
           AAAKDDALNELRAKR+KQQDP A RKLRD S+G + +R FS TKRKP  + +LSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 240

Query: 241 SESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEEL 300
           S+SR QSDDEGS  +GGM+DSDD+R    S+ PTF+D+KE+TIRRSKLAKWLMEPFFEEL
Sbjct: 241 SDSRSQSDDEGS--NGGMLDSDDDR----SDVPTFEDVKEVTIRRSKLAKWLMEPFFEEL 300

Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 360
           IVGCFVRVGIGRS+SGPIYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARW 360

Query: 361 QMAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQ 420
           QMAM+SD  PLE+EY+QW++EVERT GRM +KQDI EKKEAIQ+ N+FVYSA TVKQMLQ
Sbjct: 361 QMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQ 420

Query: 421 EKKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIR 480
           EKKSAS RP+N+AAEKDRLR ++++A SKN+EA VERIK+K++QLDASR  +  D KA++
Sbjct: 421 EKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALK 480

Query: 481 LSEMNRKNRVENFKNASELRP-TKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEA 540
           L+EMN+KNR ENFKNASE++  T  LKAGEAGYDPFSRRWTRS NYY       DG    
Sbjct: 481 LAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENE 540

Query: 541 AGNSDNITPASVTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFEL 600
           A        A+V T      AGV AT AALEAAA AGKL+DT AP+  G E N LHNFEL
Sbjct: 541 AA-----VAAAVETNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFEL 600

Query: 601 PISLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 658
            +SLT LQK+GG  G Q  F+ARKQ  EATVG +V ENDG+RH LTLTVSDYKRRRGLL
Sbjct: 601 SLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 643

[Close]

BLAST of CmoCh16G007190 vs. ExPASy Swiss-Prot
Match: Q92541 (RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens OX=9606 GN=RTF1 PE=1 SV=4)

HSP 1 Score: 109.0 bits (271), Expect = 2.1e-22
Identity = 181/697 (25.97%), Postives = 301/697 (43.19%), Query Frame = 0


Query: 3   DLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYAS--RKPS 62
           +L+  LL  A R ++    +   PP       S   A SDS   DSDDE  + S   K  
Sbjct: 63  NLDQELLSLAKRKRSDSEEK--EPPV------SQPAASSDSETSDSDDEWTFGSNKNKKK 122

Query: 63  GSQVPLKKR------------LDPNERDDDVGS--PEEGEDEDVGSEHEGDSSDESD--- 122
           G    ++K+               +++D    S  PEEGE  D  S     SSD      
Sbjct: 123 GKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSE 182

Query: 123 -------VGDDLYKDDDDRRKLAGMSELQREMILSDRASK----KNDKHLYESLRSKMDK 182
                   G+DL  D++DR +L  M+E +RE  L +R  K    K    + + L++   K
Sbjct: 183 DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKKK 242

Query: 183 GKAAPSRKENPPLPSSRIRSSARSADRAAAKDDALNELRAKRLKQQD--PEAHRKLRDTS 242
            K    +K+       ++     S   +  K     E R+KR ++ D   +A  +L+   
Sbjct: 243 EKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----ERRSKRDEKLDKKSQAMEELKAER 302

Query: 243 RGNANNRRFSPTKRKPFTAPSLSSSSQSESESRFQSDDEGSTGDGGMIDSDDER-TMPGS 302
               N       K++P     + S  + E E    S+    +      D ++E+  +P  
Sbjct: 303 EKRKNRTAELLAKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEKEEIPPK 362

Query: 303 NGPTF--DDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSRSGPIYRLCLVRNVD 362
           + P    +++  + + R KL +W   PFF + + GCFVR+GIG   S P+YR+  +  V 
Sbjct: 363 SQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV- 422

Query: 363 ATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMVSDSGPLEDEYKQWVKEVERTGGR 422
             E  + Y+L    T+K L +  GN+    R  +  VS+    E E+ +W KE   + G 
Sbjct: 423 -VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKW-KEAMFSAGM 482

Query: 423 MLSKQDILEKKE-AIQKANNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRNQMDVAL 482
            L   D + KKE +I++A N+ ++   ++++++EK+     P N A +K +L  +  +A 
Sbjct: 483 QLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 542

Query: 483 SKNNEAEVERIKAKLRQL----DASRRSQMKDAKAIRLSEMNRKNRVENFKNASELRPTK 542
              ++ + ++I+ +L +L    +A  R + K+  AI  S +N++NR  N   + +    +
Sbjct: 543 DLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVESEKALVAE 602

Query: 543 DLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAGNSDNITPASVTTGTGSGEAGVA 602
                    DPF+RR  + +   VSN+   D A +AA        A +    GSG     
Sbjct: 603 SHNMKNQQMDPFTRR--QCKPTIVSNSR--DPAVQAA------ILAQLNAKYGSG----V 662

Query: 603 ATAAALEAAAGAGKLVDTNAPVDGGTESNL--LHNFELPISLTVLQKFGGALGAQAGFLA 658
              A  E + G GK  D N+        +L  +H+F++ I L V      AL        
Sbjct: 663 LPDAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQVPSSESKAL-------- 710

[Close]

BLAST of CmoCh16G007190 vs. ExPASy Swiss-Prot
Match: A2AQ19 (RNA polymerase-associated protein RTF1 homolog OS=Mus musculus OX=10090 GN=Rtf1 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.1e-22
Identity = 181/697 (25.97%), Postives = 305/697 (43.76%), Query Frame = 0


Query: 3   DLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYAS--RKPS 62
           +L+  LL  A R ++    +   PP       S   A SDS   DSDDE  + S   K  
Sbjct: 68  NLDQELLSLAKRKRSDSEEK--EPPV------SQPAASSDSETSDSDDEWTFGSNKNKKK 127

Query: 63  GSQVPLKKR------------LDPNERDDDVGS--PEEGEDED-----VGSEHEGDSSDE 122
           G    ++K+               ++RD    S  PEEGE  D       S  + DSS E
Sbjct: 128 GKTRKVEKKGAMKKQANKAASSGSSDRDSSAESSAPEEGEVSDSESSSSSSSSDSDSSSE 187

Query: 123 SD-----VGDDLYKDDDDRRKLAGMSELQREMILSDRASK----KNDKHLYESLRSKMDK 182
            +      G+DL  D++DR +L  M+E +RE  L +R  K    K    + + L++   K
Sbjct: 188 DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKKK 247

Query: 183 GKAAPSRKENPPLPSSRIRSSARSADRAAAKDDALNELRAKRLKQQD--PEAHRKLRDTS 242
            K    +K+       ++     S   +  K     E R+KR ++ D   +A  +L+   
Sbjct: 248 EKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----ERRSKRDEKLDKKSQAMEELKAER 307

Query: 243 RGNANNRRFSPTKRKPF-TAPSLSSSSQSESESRFQSDDEGSTGDGGMIDSDDERTMPGS 302
               N       K++P  T+   S   + E + +     + S+      + +++  +P  
Sbjct: 308 EKRKNRTAELLAKKQPLKTSEVYSDDEEEEDDDKSSEKSDRSSRTSSSDEEEEKEEIPPK 367

Query: 303 NGPTF--DDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSRSGPIYRLCLVRNVD 362
           + P    +++  + + R KL +W   PFF + + GCFVR+GIG   S P+YR+  +  V 
Sbjct: 368 SQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV- 427

Query: 363 ATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMVSDSGPLEDEYKQWVKEVERTGGR 422
             E  + Y+L    T+K L +  GN+    R  +  VS+    E E+ +W KE   + G 
Sbjct: 428 -VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKW-KEAMFSAGM 487

Query: 423 MLSKQDILEKKE-AIQKANNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRNQMDVAL 482
            L   D + KKE +I++A N+ ++   ++++++EK+     P N A +K +L  +  +A 
Sbjct: 488 QLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 547

Query: 483 SKNNEAEVERIKAKLRQL----DASRRSQMKDAKAIRLSEMNRKNRVENFKNASELRPTK 542
              ++ + ++I+ +L +L    +A  R + K+  AI  S +N++NR  N   + +    +
Sbjct: 548 DLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVESEKALVAE 607

Query: 543 DLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAGNSDNITPASVTTGTGSGEAGVA 602
                    DPF+RR  + +   VSN+   D A +AA        A +    GSG     
Sbjct: 608 SHNMRNQQMDPFTRR--QCKPTIVSNSR--DPAVQAA------ILAQLNAKYGSG----V 667

Query: 603 ATAAALEAAAGAGKLVDTNAPVDGGTESNL--LHNFELPISLTVLQKFGGALGAQAGFLA 658
              A  E + G GK  D N+        +L  +H+F++ I L V      AL        
Sbjct: 668 LPDAPKEMSKGQGKDKDLNSKTASDLSEDLFKVHDFDVKIDLQVPSSESKAL-------- 715

[Close]

BLAST of CmoCh16G007190 vs. ExPASy Swiss-Prot
Match: Q5RAD5 (RNA polymerase-associated protein RTF1 homolog (Fragment) OS=Pongo abelii OX=9601 GN=RTF1 PE=2 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 4.0e-18
Identity = 165/648 (25.46%), Postives = 283/648 (43.67%), Query Frame = 0


Query: 7   LLLEAAGRTKASGRNRHSHPPSRRQREGSYSD----------AGSDSRDDDSDDERGYAS 66
           +++++      S  N     PS  +R+ S S+          A SDS   DSDDE  + S
Sbjct: 44  VVIDSDTEDSGSDENLDQELPSLAKRKRSDSEEKEPPVSQPAASSDSETSDSDDEWTFGS 103

Query: 67  --RKPSGSQVPLKKR------------LDPNERDDDVGS--PEEGEDEDVGSEHEGDSSD 126
              K  G    ++K+               +++D    S  PEEGE  D  S     SSD
Sbjct: 104 NKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSD 163

Query: 127 ESD----------VGDDLYKDDDDRRKLAGMSELQREMILSDRASK----KNDKHLYESL 186
                         G+DL  D++DR +L  M+E +RE  L +R  K    K    + + L
Sbjct: 164 SDSSSEDEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKL 223

Query: 187 RSKMDKGKAAPSRKENPPLPSSRIRSSARSADRAAAKDDALNELRAKRLKQQD--PEAHR 246
           ++   K K    +K+       ++     S   +  K     E R+KR ++ D   +A  
Sbjct: 224 KTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----ERRSKRDEKLDKKSQAME 283

Query: 247 KLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSESESRFQSDDEGSTGDGGMIDSDDER 306
           +L+       N       K++P     + S  + E E    S+    +      D ++E+
Sbjct: 284 ELKAEREKRKNRTVELLAKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEK 343

Query: 307 -TMPGSNGPTF--DDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSRSGPIYRLC 366
             +P  + P    +++  + + R KL +W   PFF + + GCFVR+GIG   S P+YR+ 
Sbjct: 344 EEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVA 403

Query: 367 LVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMVSDSGPLEDEYKQWVKEV 426
            +  V   E  + Y+L    T+K L +  GN+    R  +  VS+    E E+ +W KE 
Sbjct: 404 EITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKW-KEA 463

Query: 427 ERTGGRMLSKQDILEKKE-AIQKANNFVYSAATVKQMLQEKKSASSRPLNIAAEKDRLRN 486
             + G  L   D + KKE +I++A N+ ++   ++++++EK+     P N A +K +L  
Sbjct: 464 MFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLK 523

Query: 487 QMDVALSKNNEAEVERIKAKLRQL----DASRRSQMKDAKAIRLSEMNRKNRVENFKNAS 546
           +  +A    ++ + ++I+ +L +L    +A  R + K+  AI  S +N++NR  N   + 
Sbjct: 524 EKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVESE 583

Query: 547 ELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAGNSDNITPASVTTGTGS 603
           +    +         DPF+RR  + +   VSN+   D A +AA        A +    GS
Sbjct: 584 KALVAESHNMKNQQMDPFTRR--QCKPTIVSNSR--DPAVQAA------ILAQLNAKYGS 643

[Close]

BLAST of CmoCh16G007190 vs. ExPASy Swiss-Prot
Match: G5EBY0 (RNA polymerase-associated protein RTF1 homolog OS=Caenorhabditis elegans OX=6239 GN=rtfo-1 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-13
Identity = 147/599 (24.54%), Postives = 258/599 (43.07%), Query Frame = 0


Query: 45  DDDSDDERGYASRKPSGSQVPLKKRLDPNERDDDVGSPE----EGEDEDVGSEHEGDSSD 104
           D DSD + G    KP  +        D +  D D   P+    + +           SSD
Sbjct: 22  DSDSDSDAGPKPGKPLST--------DSSASDSDAEKPQAKPAKKKTLTKRKRRATGSSD 81

Query: 105 ESDVGDDLYKDDDDRRKLAGMSELQREMILSDR--------------------ASKKNDK 164
           +  V DDL+ D +D+ +   ++EL++E  + +R                    A K ++K
Sbjct: 82  DDQVDDDLFADKEDKARWKKLTELEKEQEIFERMEARENAIAREEIAQQLAKKAKKSSEK 141

Query: 165 HLYESLRSKMDKG---KAAPSRKENPPLPSSRIRSSARSAD--RAAAKDDALNELRAKRL 224
            +    R KM+ G     +P RK +    S    +  R +D  R   + +A++ L+ KR 
Sbjct: 142 GVKTEKRRKMNSGGSDAGSPKRKASSDSDSEMDAAFHRPSDINRKHKEKNAMDALKNKR- 201

Query: 225 KQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSESESRFQSDDEGSTGDG 284
                      ++  + NA N   S        + S SSSS SES     S  E S    
Sbjct: 202 -----------KEIEKKNAKNEALSIDAVFGANSGSSSSSSSSESSRSSSSSRESSPERV 261

Query: 285 GMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGR-SRS 344
              D   ++ + G       +++   + R KL+  +  PFF+  +VGC+VR+G G+ S S
Sbjct: 262 SEKDKIVKKDVDG-----LSELRRARLSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSGS 321

Query: 345 GPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMVSDSGPLEDEY 404
           G  YR+  +  V+  E ++ Y+LE K T+K +     N  S   ++M  VS++   + E+
Sbjct: 322 GSKYRIWKIVGVE--ESNKVYELEGKKTNKIIKC--QNGGSERPFRMQFVSNADFEQIEF 381

Query: 405 KQWVKEVERTGGRMLSKQDILE-KKEAIQKANNFVYSAATVKQMLQEKKSASSRPLNIAA 464
            +W+   +R G   L   DI++ KK+ I+KA N  YS   V  M++EK    + P N A 
Sbjct: 382 DEWLLACKRHGN--LPTVDIMDKKKQDIEKAINHKYSDKEVDLMIKEKSKYQTVPRNFAM 441

Query: 465 EKDRLRNQMDVALSKNNEAEVERIKAKL----RQLDASRRSQMKDAKAIRLSEMNRKNRV 524
            K     Q ++A  + +  E E+I+ K+    RQ D   + + K   AI       ++++
Sbjct: 442 TKANWSKQKELAQQRGDIREAEQIQTKIDEIERQADELEKERSKSISAIAFINHRNRSKI 501

Query: 525 ENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAGNSDNITPAS 584
           ++   + +L+  ++ +      DPF+R+    R     +  ++DG   A+ ++ N++   
Sbjct: 502 KDQVLSGQLKIEENSQD-----DPFTRKKGGMR-VVSGSKSRLDGTLSASSSTTNLSDG- 561

Query: 585 VTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPISLTVLQKF 609
                G  ++   A       +    K  D ++          LH+F+L I L  L+ F
Sbjct: 562 -----GKDKSSSLAKPTQPPPSTQIKKKTDISS----------LHDFDLDIDLGKLKDF 567

[Close]

BLAST of CmoCh16G007190 vs. ExPASy TrEMBL
Match: A0A6J1ENR7 (protein RTF1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111436021 PE=4 SV=1)

HSP 1 Score: 1224.9 bits (3168), Expect = 0.0e+00
Identity = 657/657 (100.00%), Postives = 657/657 (100.00%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60
           MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360

Query: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420
           MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE
Sbjct: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420

Query: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480
           KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL
Sbjct: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480

Query: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540
           SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG
Sbjct: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540

Query: 541 NSDNITPASVTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI 600
           NSDNITPASVTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI
Sbjct: 541 NSDNITPASVTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI 600

Query: 601 SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 658
           SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 657

[Close]

BLAST of CmoCh16G007190 vs. ExPASy TrEMBL
Match: A0A6J1J9Q9 (protein RTF1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482580 PE=4 SV=1)

HSP 1 Score: 1215.3 bits (3143), Expect = 0.0e+00
Identity = 653/657 (99.39%), Postives = 654/657 (99.54%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60
           MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360

Query: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420
           MAMVSDS PLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE
Sbjct: 361 MAMVSDSVPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420

Query: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480
           KK ASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL
Sbjct: 421 KKFASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480

Query: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540
           SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG
Sbjct: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540

Query: 541 NSDNITPASVTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI 600
           NSDNITPAS +TGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI
Sbjct: 541 NSDNITPASESTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI 600

Query: 601 SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 658
           SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 657

[Close]

BLAST of CmoCh16G007190 vs. ExPASy TrEMBL
Match: A0A1S3BXS8 (protein RTF1 homolog OS=Cucumis melo OX=3656 GN=LOC103494388 PE=4 SV=1)

HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 610/660 (92.42%), Postives = 635/660 (96.21%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60
           MADLENLLLEAAGRT A G NRHSHPPSRRQREGSYSD GSDSRDDDSDDERGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAGGGNRHSHPPSRRQREGSYSDGGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP ERDDD GSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLR+KMDKGK APSRKE PPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRD SRGN+NNRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNSNNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDER+MPGS+GPTF+DIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNENSAARWQ 360

Query: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420
           MAMVSDS PLEDEYKQWVKEVERTGGRMLSKQD+LEKK+AIQK NNFVYSAATVKQMLQ+
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDVLEKKDAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480
           KKSAS+RPLNIAAEKDRLR +MDVA+SKN+EAEVERIK +L+QL+ASRR QMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKGRLQQLEASRRLQMKDAKAIRL 480

Query: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540
           +EMNRKNRVENFKNASELRP KDLKAGEAGYDPFSRRWTRSRNYYVSNAG+ +GAAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540

Query: 541 NSDNITPASVTTGTGSG---EAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFE 600
           NSD +TPA  +T TG+G   +AG+AATAAALEAAAGAGKLVDTNAPVDGGTESN LHNFE
Sbjct: 541 NSDTVTPALESTRTGAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 658
           LPISL +LQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

[Close]

BLAST of CmoCh16G007190 vs. ExPASy TrEMBL
Match: A0A5A7TNN4 (Protein RTF1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005550 PE=4 SV=1)

HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 610/660 (92.42%), Postives = 635/660 (96.21%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60
           MADLENLLLEAAGRT A G NRHSHPPSRRQREGSYSD GSDSRDDDSDDERGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAGGGNRHSHPPSRRQREGSYSDGGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP ERDDD GSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLR+KMDKGK APSRKE PPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRD SRGN+NNRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNSNNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDER+MPGS+GPTF+DIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNENSAARWQ 360

Query: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420
           MAMVSDS PLEDEYKQWVKEVERTGGRMLSKQD+LEKK+AIQK NNFVYSAATVKQMLQ+
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDVLEKKDAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480
           KKSAS+RPLNIAAEKDRLR +MDVA+SKN+EAEVERIK +L+QL+ASRR QMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKGRLQQLEASRRLQMKDAKAIRL 480

Query: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540
           +EMNRKNRVENFKNASELRP KDLKAGEAGYDPFSRRWTRSRNYYVSNAG+ +GAAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540

Query: 541 NSDNITPASVTTGTGSG---EAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFE 600
           NSD +TPA  +T TG+G   +AG+AATAAALEAAAGAGKLVDTNAPVDGGTESN LHNFE
Sbjct: 541 NSDTVTPALESTRTGAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 658
           LPISL +LQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

[Close]

BLAST of CmoCh16G007190 vs. ExPASy TrEMBL
Match: A0A0A0KXW1 (Plus3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G038650 PE=4 SV=1)

HSP 1 Score: 1137.5 bits (2941), Expect = 0.0e+00
Identity = 609/660 (92.27%), Postives = 636/660 (96.36%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60
           MADLENLLLEAAGRT A+GRNRHSHPPSRRQREGSYSDAGSDSRDDDSDD+RGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP ERDDD GS EEGEDEDVGSE EGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLR+KMDKGK+APSRKE PPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRD SRGNAN+RRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDER++PGS+GPTF+DIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360

Query: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420
           MAMVSDS PLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQK NNFVYSAATVKQMLQ+
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480
           KKSAS+RPLNIAAEKDRLR +MDVA+SKN+EAEVERIK +L+QL+ASRR QMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480

Query: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540
           +EMNRKNRVENFKNASELRP KDLKAGEAGYDPFSRRWTRSRNYYVSNAG+ +GAAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540

Query: 541 NSDNITPASVTTGT---GSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFE 600
           NSDN+TPA   T T   G+ +AG+AATAAALEAAAGAGKLVDTNAPVDGGTESN LHNFE
Sbjct: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 658
           LPISL +LQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

[Close]

BLAST of CmoCh16G007190 vs. NCBI nr
Match: XP_022929443.1 (protein RTF1 homolog [Cucurbita moschata] >XP_022929444.1 protein RTF1 homolog [Cucurbita moschata] >XP_022929445.1 protein RTF1 homolog [Cucurbita moschata])

HSP 1 Score: 1224.9 bits (3168), Expect = 0.0e+00
Identity = 657/657 (100.00%), Postives = 657/657 (100.00%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60
           MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360

Query: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420
           MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE
Sbjct: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420

Query: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480
           KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL
Sbjct: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480

Query: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540
           SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG
Sbjct: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540

Query: 541 NSDNITPASVTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI 600
           NSDNITPASVTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI
Sbjct: 541 NSDNITPASVTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI 600

Query: 601 SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 658
           SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 657

[Close]

BLAST of CmoCh16G007190 vs. NCBI nr
Match: KAG7015346.1 (Protein RTF1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1218.0 bits (3150), Expect = 0.0e+00
Identity = 654/657 (99.54%), Postives = 654/657 (99.54%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60
           MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPP PSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPPPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360

Query: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420
           MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE
Sbjct: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420

Query: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480
           KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL
Sbjct: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480

Query: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540
           SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG
Sbjct: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540

Query: 541 NSDNITPASVTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI 600
           NSDNITPAS TTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI
Sbjct: 541 NSDNITPASETTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI 600

Query: 601 SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 658
           SL VLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 SLAVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 657

[Close]

BLAST of CmoCh16G007190 vs. NCBI nr
Match: KAG6577256.1 (Protein RTF1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1216.8 bits (3147), Expect = 0.0e+00
Identity = 653/657 (99.39%), Postives = 654/657 (99.54%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60
           MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS
Sbjct: 41  MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 100

Query: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 101 GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 160

Query: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPP PSSRIRSSARSADRA
Sbjct: 161 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPPPSSRIRSSARSADRA 220

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTK+KPFTAPSLSSSSQSES
Sbjct: 221 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKQKPFTAPSLSSSSQSES 280

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 281 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 340

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ
Sbjct: 341 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 400

Query: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420
           MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE
Sbjct: 401 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 460

Query: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480
           KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL
Sbjct: 461 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 520

Query: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540
           SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAE AG
Sbjct: 521 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAETAG 580

Query: 541 NSDNITPASVTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI 600
           NSDNITPAS TTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI
Sbjct: 581 NSDNITPASETTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI 640

Query: 601 SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 658
           SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 641 SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 697

[Close]

BLAST of CmoCh16G007190 vs. NCBI nr
Match: XP_023552862.1 (protein RTF1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1216.4 bits (3146), Expect = 0.0e+00
Identity = 652/657 (99.24%), Postives = 655/657 (99.70%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60
           MADLENLLLEAAGRTK+SGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTKSSGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360

Query: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420
           MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE
Sbjct: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420

Query: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480
           KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL
Sbjct: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480

Query: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540
           SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG
Sbjct: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540

Query: 541 NSDNITPASVTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI 600
           N+DNITPA  +TGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI
Sbjct: 541 NNDNITPALESTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI 600

Query: 601 SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 658
           SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 657

[Close]

BLAST of CmoCh16G007190 vs. NCBI nr
Match: XP_022984183.1 (protein RTF1 homolog [Cucurbita maxima] >XP_022984184.1 protein RTF1 homolog [Cucurbita maxima] >XP_022984185.1 protein RTF1 homolog [Cucurbita maxima])

HSP 1 Score: 1215.3 bits (3143), Expect = 0.0e+00
Identity = 653/657 (99.39%), Postives = 654/657 (99.54%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60
           MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360

Query: 361 MAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420
           MAMVSDS PLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE
Sbjct: 361 MAMVSDSVPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQE 420

Query: 421 KKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480
           KK ASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL
Sbjct: 421 KKFASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIRL 480

Query: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540
           SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG
Sbjct: 481 SEMNRKNRVENFKNASELRPTKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEAAG 540

Query: 541 NSDNITPASVTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI 600
           NSDNITPAS +TGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI
Sbjct: 541 NSDNITPASESTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFELPI 600

Query: 601 SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 658
           SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 SLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 657

[Close]

BLAST of CmoCh16G007190 vs. TAIR 10
Match: AT1G61040.1 (plus-3 domain-containing protein )

HSP 1 Score: 800.4 bits (2066), Expect = 1.1e-231
Identity = 456/659 (69.20%), Postives = 531/659 (80.58%), Query Frame = 0


Query: 1   MADLENLLLEAAGRTKASGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDERGYASRKPS 60
           M DLENLLLEAAGRT ++GR+R  HPPS R+REGSYSD  SDSR DDSD++RGYASRKPS
Sbjct: 1   MGDLENLLLEAAGRTNSAGRSR--HPPSSRRREGSYSDGSSDSR-DDSDEDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPNERDDDVGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRL+  ER+D     E G   D  S+ EGDSS+ESD GDDLYK+++DR+KLAG
Sbjct: 61  GSQVPLKKRLEA-EREDRAARVEGGYG-DGPSDREGDSSEESDFGDDLYKNEEDRQKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRSKMDKGKAAPSRKENPPLPSSR-IRSSARSADR 180
           M+E QREMILS+RA KK DK+  E LRSK +  K   S+KE  PLP+SR +RSSARSADR
Sbjct: 121 MTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDTSRGNANNRRFSPTKRKPFTAPSLSSSSQSE 240
           AAAKDDALNELRAKR+KQQDP A RKLRD S+G + +R FS TKRKP  + +LSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 240

Query: 241 SESRFQSDDEGSTGDGGMIDSDDERTMPGSNGPTFDDIKEITIRRSKLAKWLMEPFFEEL 300
           S+SR QSDDEGS  +GGM+DSDD+R    S+ PTF+D+KE+TIRRSKLAKWLMEPFFEEL
Sbjct: 241 SDSRSQSDDEGS--NGGMLDSDDDR----SDVPTFEDVKEVTIRRSKLAKWLMEPFFEEL 300

Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 360
           IVGCFVRVGIGRS+SGPIYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARW 360

Query: 361 QMAMVSDSGPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKANNFVYSAATVKQMLQ 420
           QMAM+SD  PLE+EY+QW++EVERT GRM +KQDI EKKEAIQ+ N+FVYSA TVKQMLQ
Sbjct: 361 QMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQ 420

Query: 421 EKKSASSRPLNIAAEKDRLRNQMDVALSKNNEAEVERIKAKLRQLDASRRSQMKDAKAIR 480
           EKKSAS RP+N+AAEKDRLR ++++A SKN+EA VERIK+K++QLDASR  +  D KA++
Sbjct: 421 EKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALK 480

Query: 481 LSEMNRKNRVENFKNASELRP-TKDLKAGEAGYDPFSRRWTRSRNYYVSNAGQVDGAAEA 540
           L+EMN+KNR ENFKNASE++  T  LKAGEAGYDPFSRRWTRS NYY       DG    
Sbjct: 481 LAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENE 540

Query: 541 AGNSDNITPASVTTGTGSGEAGVAATAAALEAAAGAGKLVDTNAPVDGGTESNLLHNFEL 600
           A        A+V T      AGV AT AALEAAA AGKL+DT AP+  G E N LHNFEL
Sbjct: 541 AA-----VAAAVETNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFEL 600

Query: 601 PISLTVLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 658
            +SLT LQK+GG  G Q  F+ARKQ  EATVG +V ENDG+RH LTLTVSDYKRRRGLL
Sbjct: 601 SLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 643

The following BLAST results are available for this feature:

BLAST of CmoCh16G007190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C950	1.5e-230	69.20	Protein RTF1 homolog OS=Arabidopsis thaliana OX=3702 GN=VIP5 PE=1 SV=1	[more]
Q92541	2.1e-22	25.97	RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens OX=9606 GN=RTF1 P...	[more]
A2AQ19	2.1e-22	25.97	RNA polymerase-associated protein RTF1 homolog OS=Mus musculus OX=10090 GN=Rtf1 ...	[more]
Q5RAD5	4.0e-18	25.46	RNA polymerase-associated protein RTF1 homolog (Fragment) OS=Pongo abelii OX=960...	[more]
G5EBY0	1.8e-13	24.54	RNA polymerase-associated protein RTF1 homolog OS=Caenorhabditis elegans OX=6239...	[more]

BLAST of CmoCh16G007190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENR7	0.0e+00	100.00	protein RTF1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111436021 PE=4 SV=1	[more]
A0A6J1J9Q9	0.0e+00	99.39	protein RTF1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482580 PE=4 SV=1	[more]
A0A1S3BXS8	0.0e+00	92.42	protein RTF1 homolog OS=Cucumis melo OX=3656 GN=LOC103494388 PE=4 SV=1	[more]
A0A5A7TNN4	0.0e+00	92.42	Protein RTF1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KXW1	0.0e+00	92.27	Plus3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G038650 PE=4 ...	[more]

BLAST of CmoCh16G007190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929443.1	0.0e+00	100.00	protein RTF1 homolog [Cucurbita moschata] >XP_022929444.1 protein RTF1 homolog [...	[more]
KAG7015346.1	0.0e+00	99.54	Protein RTF1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6577256.1	0.0e+00	99.39	Protein RTF1-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023552862.1	0.0e+00	99.24	protein RTF1 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022984183.1	0.0e+00	99.39	protein RTF1 homolog [Cucurbita maxima] >XP_022984184.1 protein RTF1 homolog [Cu...	[more]

BLAST of CmoCh16G007190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61040.1	1.1e-231	69.20	plus-3 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 435..467
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..275
None	No IPR available	PANTHER	PTHR13115	UNCHARACTERIZED	coord: 1..657
None	No IPR available	PANTHER	PTHR13115:SF15	PLUS-3 DOMAIN PROTEIN	coord: 1..657
IPR004343	Plus-3 domain	SMART	SM00719	rtf1	coord: 271..383 e-value: 2.4E-44 score: 163.3
IPR004343	Plus-3 domain	PFAM	PF03126	Plus-3	coord: 276..381 e-value: 1.2E-30 score: 106.2
IPR004343	Plus-3 domain	PROSITE	PS51360	PLUS3	coord: 271..406 score: 36.706348
IPR036128	Plus3-like superfamily	GENE3D	3.90.70.200		coord: 272..404 e-value: 5.7E-35 score: 122.0
IPR036128	Plus3-like superfamily	SUPERFAMILY	159042	Plus3-like	coord: 273..404

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G007190.1	CmoCh16G007190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016593	Cdc73/Paf1 complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:1990269	RNA polymerase II C-terminal domain phosphoserine binding