CmoCh15G012610 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G012610
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	dehydration-responsive element-binding protein 1A-like
Location	Cmo_Chr15: 8654286 .. 8654975 (-)
RNA-Seq Expression	CmoCh15G012610
Synteny	CmoCh15G012610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTATTCTCTCAATTTTCTGATCCTCTTCCTTATTATGGTAATTGTAATTACAATTCGGAATCGTCGTCGGCGTTTTTTGACGCCGGAACGCATCCGCTCACGGTGGCTACCTCCGACGAGGAAGTGATACTGGCGTCGAACCAGCCCAAGCGCCCGGCGGGTCGGCGGGTTTTTAAAGAGACGAGGCATCCGGTCTACAGAGGAGTACGTCGGAGGAATAACGACAAATGGGTTTGTGAGATGAGGGAGCCGAATAAGAAGACCAGGATTTGGCTCGGGACTTACCCAACGGCTGAGATGGCGGCGCGTGCACACGATGTGGCTGCACTCGCGTTGAGAGGGAAGTCGGCTTGTCTCAATTTTGCTGACTCGGCATGGCGGTTTCCGATTCCGGCTAGTGATGACCCGTCTGTGATCCGAGCGGCAGCAGCGATGGCGGCGAATGAATGCAAGGATGAGGAATGTAATGCGTGTCGGGAAGAGGACGACGTCGTTTTGTGTCAACCCACGGCGAGTCCTGACCAGCCGGTTTATGTCGACGATGAGGCTTTGTCGAATATGCCAATGTTGCTTGCCAACATGGCGGAAGGACTTCTTCTTTCTCCTCCGTCTTTTTGTGTAAATGATGACGTGGAGTGGGATGATGTGGCCATGAGTCATGACGTGTCATTGTGGAACTTTTAG

mRNA sequence

ATGGATTTATTCTCTCAATTTTCTGATCCTCTTCCTTATTATGGTAATTGTAATTACAATTCGGAATCGTCGTCGGCGTTTTTTGACGCCGGAACGCATCCGCTCACGGTGGCTACCTCCGACGAGGAAGTGATACTGGCGTCGAACCAGCCCAAGCGCCCGGCGGGTCGGCGGGTTTTTAAAGAGACGAGGCATCCGGTCTACAGAGGAGTACGTCGGAGGAATAACGACAAATGGGTTTGTGAGATGAGGGAGCCGAATAAGAAGACCAGGATTTGGCTCGGGACTTACCCAACGGCTGAGATGGCGGCGCGTGCACACGATGTGGCTGCACTCGCGTTGAGAGGGAAGTCGGCTTGTCTCAATTTTGCTGACTCGGCATGGCGGTTTCCGATTCCGGCTAGTGATGACCCGTCTGTGATCCGAGCGGCAGCAGCGATGGCGGCGAATGAATGCAAGGATGAGGAATGTAATGCGTGTCGGGAAGAGGACGACGTCGTTTTGTGTCAACCCACGGCGAGTCCTGACCAGCCGGTTTATGTCGACGATGAGGCTTTGTCGAATATGCCAATGTTGCTTGCCAACATGGCGGAAGGACTTCTTCTTTCTCCTCCGTCTTTTTGTGTAAATGATGACGTGGAGTGGGATGATGTGGCCATGAGTCATGACGTGTCATTGTGGAACTTTTAG

Coding sequence (CDS)

ATGGATTTATTCTCTCAATTTTCTGATCCTCTTCCTTATTATGGTAATTGTAATTACAATTCGGAATCGTCGTCGGCGTTTTTTGACGCCGGAACGCATCCGCTCACGGTGGCTACCTCCGACGAGGAAGTGATACTGGCGTCGAACCAGCCCAAGCGCCCGGCGGGTCGGCGGGTTTTTAAAGAGACGAGGCATCCGGTCTACAGAGGAGTACGTCGGAGGAATAACGACAAATGGGTTTGTGAGATGAGGGAGCCGAATAAGAAGACCAGGATTTGGCTCGGGACTTACCCAACGGCTGAGATGGCGGCGCGTGCACACGATGTGGCTGCACTCGCGTTGAGAGGGAAGTCGGCTTGTCTCAATTTTGCTGACTCGGCATGGCGGTTTCCGATTCCGGCTAGTGATGACCCGTCTGTGATCCGAGCGGCAGCAGCGATGGCGGCGAATGAATGCAAGGATGAGGAATGTAATGCGTGTCGGGAAGAGGACGACGTCGTTTTGTGTCAACCCACGGCGAGTCCTGACCAGCCGGTTTATGTCGACGATGAGGCTTTGTCGAATATGCCAATGTTGCTTGCCAACATGGCGGAAGGACTTCTTCTTTCTCCTCCGTCTTTTTGTGTAAATGATGACGTGGAGTGGGATGATGTGGCCATGAGTCATGACGTGTCATTGTGGAACTTTTAG

Protein sequence

MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVFKETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSACLNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVYVDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF

Homology

[Close]

BLAST of CmoCh15G012610 vs. ExPASy Swiss-Prot
Match: Q9M0L0 (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=DREB1A PE=1 SV=2)

HSP 1 Score: 203.4 bits (516), Expect = 2.8e-51
Identity = 114/192 (59.38%), Postives = 135/192 (70.31%), Query Frame = 0


Query: 46  LASNQPKRPAGRRVFKETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAAR 105
           LAS+ PK+PAGR+ F+ETRHP+YRGVRRRN+ KWVCE+REPNKKTRIWLGT+ TAEMAAR
Sbjct: 29  LASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAAR 88

Query: 106 AHDVAALALRGKSACLNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNAC----- 165
           AHDVAALALRG+SACLNFADSAWR  IP S     I+ AAA AA   +DE C+A      
Sbjct: 89  AHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCDATTDHGF 148

Query: 166 -REEDDVVLCQPTASPDQPVYVDDEALSNMPMLLANMAEGLLLSPPS--FCVNDDVEWDD 225
             EE  V         +   Y+ DEA+  MP LLANMAEG+LL  PS  +  N +V+ DD
Sbjct: 149 DMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEGMLLPLPSVQWNHNHEVDGDD 208

Query: 226 VAMSHDVSLWNF 230
                DVSLW++
Sbjct: 209 ----DDVSLWSY 216

[Close]

BLAST of CmoCh15G012610 vs. ExPASy Swiss-Prot
Match: Q9SYS6 (Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=DREB1C PE=1 SV=2)

HSP 1 Score: 199.1 bits (505), Expect = 5.3e-50
Identity = 110/193 (56.99%), Postives = 138/193 (71.50%), Query Frame = 0


Query: 46  LASNQPKRPAGRRVFKETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAAR 105
           LA++ PK+PAGR+ F+ETRHP+YRGVR+RN+ KWVCE+REPNKKTRIWLGT+ TAEMAAR
Sbjct: 29  LATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAEMAAR 88

Query: 106 AHDVAALALRGKSACLNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACRE--- 165
           AHDVAA+ALRG+SACLNFADSAWR  IP S     I+ AAA AA   +DE C+   +   
Sbjct: 89  AHDVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQKAAAEAALNFQDEMCHMTTDAHG 148

Query: 166 -EDDVVLCQPTASPDQ---PVYVDDEALSNMPMLLANMAEGLLLSPPS--FCVNDDVEWD 225
            + +  L +   +P+Q     Y+D+EA+  M  LL NMAEG+LL  PS  +  N DVE D
Sbjct: 149 LDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGMLLPSPSVQWNYNFDVEGD 208

Query: 226 DVAMSHDVSLWNF 230
           D     DVSLW++
Sbjct: 209 D-----DVSLWSY 216

[Close]

BLAST of CmoCh15G012610 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 1.7e-48
Identity = 108/194 (55.67%), Postives = 131/194 (67.53%), Query Frame = 0


Query: 46  LASNQPKRPAGRRVFKETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAAR 105
           LA++ PK+PAGR+ F+ETRHP+YRGVR+RN+ KWV E+REPNKKTRIWLGT+ TAEMAAR
Sbjct: 26  LATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAAR 85

Query: 106 AHDVAALALRGKSACLNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNAC----- 165
           AHDVAALALRG+SACLNFADSAWR  IP S     I+ AAA AA   +DE C+       
Sbjct: 86  AHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHG 145

Query: 166 --REEDDVVLCQPTASPDQPVYVDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWD-- 225
              EE  V         +   Y+D+E +  MP LL NMAEG+LL PPS      V+W+  
Sbjct: 146 LDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPS------VQWNHN 205

Query: 226 -DVAMSHDVSLWNF 230
            D     DVSLW++
Sbjct: 206 YDGEGDGDVSLWSY 213

[Close]

BLAST of CmoCh15G012610 vs. ExPASy Swiss-Prot
Match: Q9FJ93 (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 5.5e-47
Identity = 114/223 (51.12%), Postives = 141/223 (63.23%), Query Frame = 0


Query: 19  YNSESSSAFFDAGTHPLTVATSDE-EVILASNQPKRPAGRRVFKETRHPVYRGVRRRNND 78
           + S    +F     H   V+ S E    LAS+ PK+ AGR+ F+ETRHP+YRGVR+RN+ 
Sbjct: 4   FYSTFPDSFLSISDHRSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSG 63

Query: 79  KWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSACLNFADSAWRFPIPASDD 138
           KWVCE+REPNKK+RIWLGT+PT EMAARAHDVAALALRG+SACLNFADSAWR  IP +  
Sbjct: 64  KWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTC 123

Query: 139 PSVIRAAAAMAA----NECKDEECNACREEDDV----VLCQPTASPDQ---PVYVDDEAL 198
           P  I+ AA+ AA    NE   E      E ++     V      + +Q     Y+DDEAL
Sbjct: 124 PKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEAL 183

Query: 199 SNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 230
             MP    NMAEG+LL PP    N + ++D V    DVSLW+F
Sbjct: 184 LGMPNFFENMAEGMLLPPPEVGWNHN-DFDGVG---DVSLWSF 222

[Close]

BLAST of CmoCh15G012610 vs. ExPASy Swiss-Prot
Match: Q9SGJ6 (Dehydration-responsive element-binding protein 1E OS=Arabidopsis thaliana OX=3702 GN=DREB1E PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.5e-44
Identity = 97/191 (50.79%), Postives = 127/191 (66.49%), Query Frame = 0


Query: 41  DEEVILASNQPKRPAGRRVFKETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTA 100
           ++++ +A  +PK+ AGRR+FKETRHP+YRGVRRR+ DKWVCE+REP  + R+WLGTYPTA
Sbjct: 3   NDDITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTA 62

Query: 101 EMAARAHDVAALALRGKSACLNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNAC 160
           +MAARAHDVA LALRG+SACLNF+DSAWR P+PAS DP  IR  AA AA   +  E +  
Sbjct: 63  DMAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEFST- 122

Query: 161 REEDDVVLCQPTASPDQPVYVDDEALSNMPMLLANMAEGLLLSPPSFCV--NDDVEWDDV 220
                 +   P+AS        DE ++ M M    +AE  L+SPP   +  N  V  D+ 
Sbjct: 123 -----GITVLPSASEFD---TSDEGVAGMMM---RLAEEPLMSPPRSYIDMNTSVYVDEE 181

Query: 221 AMSHDVSLWNF 230
               D+SLW++
Sbjct: 183 MCYEDLSLWSY 181

[Close]

BLAST of CmoCh15G012610 vs. ExPASy TrEMBL
Match: A0A6J1E8J8 (dehydration-responsive element-binding protein 1A-like OS=Cucurbita moschata OX=3662 GN=LOC111430380 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 5.4e-130
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF 60
           MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF
Sbjct: 1   MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF 60

Query: 61  KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC
Sbjct: 61  KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY 180
           LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY
Sbjct: 121 LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY 180

Query: 181 VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 230
           VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF
Sbjct: 181 VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 229

[Close]

BLAST of CmoCh15G012610 vs. ExPASy TrEMBL
Match: A0A5A7TJ39 (Dehydration-responsive element-binding protein 1E OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003010 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 186/229 (81.22%), Postives = 200/229 (87.34%), Query Frame = 0


Query: 1   MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF 60
           MD F+QFSDPLPYY NC+Y SESSS   DAGT P TV  SDEEVILASN+PKR AGRR+F
Sbjct: 1   MDWFAQFSDPLPYYPNCSYKSESSSTLSDAGTPPQTVVNSDEEVILASNRPKRRAGRRIF 60

Query: 61  KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVR+RNNDKWVCE+REPNKKTRIWLGTYPTAEMAARAHD+AALALRGKSAC
Sbjct: 61  KETRHPVYRGVRQRNNDKWVCELREPNKKTRIWLGTYPTAEMAARAHDIAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY 180
           LNFADSAWRFPIPASDDP+VIR AA  AANE +DEECN  REEDD    Q  A PD+  Y
Sbjct: 121 LNFADSAWRFPIPASDDPAVIREAAVRAANEGRDEECNVGREEDDGGSNQQEAYPDRTDY 180

Query: 181 VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 230
           VDDE +SNMPMLLANMAEGLLLSPPSFCVN+DVEWDDVA + DVSLW+F
Sbjct: 181 VDDETMSNMPMLLANMAEGLLLSPPSFCVNEDVEWDDVATNDDVSLWSF 229

[Close]

BLAST of CmoCh15G012610 vs. ExPASy TrEMBL
Match: A0A1S3ATG1 (dehydration-responsive element-binding protein 1E OS=Cucumis melo OX=3656 GN=LOC103482707 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 186/229 (81.22%), Postives = 200/229 (87.34%), Query Frame = 0


Query: 1   MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF 60
           MD F+QFSDPLPYY NC+Y SESSS   DAGT P TV  SDEEVILASN+PKR AGRR+F
Sbjct: 1   MDWFAQFSDPLPYYPNCSYKSESSSTLSDAGTPPQTVVNSDEEVILASNRPKRRAGRRIF 60

Query: 61  KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVR+RNNDKWVCE+REPNKKTRIWLGTYPTAEMAARAHD+AALALRGKSAC
Sbjct: 61  KETRHPVYRGVRQRNNDKWVCELREPNKKTRIWLGTYPTAEMAARAHDIAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY 180
           LNFADSAWRFPIPASDDP+VIR AA  AANE +DEECN  REEDD    Q  A PD+  Y
Sbjct: 121 LNFADSAWRFPIPASDDPAVIREAAVRAANEGRDEECNVGREEDDGGSNQQEAYPDRTDY 180

Query: 181 VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 230
           VDDE +SNMPMLLANMAEGLLLSPPSFCVN+DVEWDDVA + DVSLW+F
Sbjct: 181 VDDETMSNMPMLLANMAEGLLLSPPSFCVNEDVEWDDVATNDDVSLWSF 229

[Close]

BLAST of CmoCh15G012610 vs. ExPASy TrEMBL
Match: A0A6J1H1W9 (dehydration-responsive element-binding protein 1E-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459681 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 9.9e-100
Identity = 185/229 (80.79%), Postives = 198/229 (86.46%), Query Frame = 0


Query: 1   MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF 60
           MD F+QFSDP+PYYGN N  SESSS   DAGT P  VA SDEEVILASN+PKR AGRRVF
Sbjct: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF 60

Query: 61  KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVRRRN  KWVCE+REPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC
Sbjct: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY 180
           LNFADSAWRFPIP+S+DPSVIR AAA AA EC+ EECN  REED+VVL QP A PDQ  Y
Sbjct: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDEVVLSQPKAEPDQRDY 180

Query: 181 VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 230
           VDDEALSNMPMLLA+MAEG LLSPP FC+ DDVEWD+V  + DVSLW+F
Sbjct: 181 VDDEALSNMPMLLASMAEGPLLSPPRFCLRDDVEWDNVDTNDDVSLWSF 229

[Close]

BLAST of CmoCh15G012610 vs. ExPASy TrEMBL
Match: A0A6J1K939 (dehydration-responsive element-binding protein 1C-like OS=Cucurbita maxima OX=3661 GN=LOC111491237 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.1e-98
Identity = 185/229 (80.79%), Postives = 196/229 (85.59%), Query Frame = 0


Query: 1   MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF 60
           MD F+QFSDP+PYYGN NY SESSS   DAGT    VA SDEEVILASN+PKR AGRRVF
Sbjct: 1   MDFFTQFSDPIPYYGNYNYKSESSSTLSDAGTPLHVVANSDEEVILASNRPKRRAGRRVF 60

Query: 61  KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVRRRN  KWVCE+REPNKKTRIWLGTY TAEMAARAHDVAALALRGKSAC
Sbjct: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYLTAEMAARAHDVAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY 180
           LNFADSAWRFPIP+S+DPSVIR AAA AA EC+ EECN  REED+VVL QP A PDQ  Y
Sbjct: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDEVVLSQPKAEPDQRDY 180

Query: 181 VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 230
           VDDEAL NMPMLLA+MAEG LLSPP FCV DDVEWDDV  + DVSLW+F
Sbjct: 181 VDDEALLNMPMLLASMAEGPLLSPPHFCVRDDVEWDDVDTNDDVSLWSF 229

[Close]

BLAST of CmoCh15G012610 vs. NCBI nr
Match: XP_022922370.1 (dehydration-responsive element-binding protein 1A-like [Cucurbita moschata])

HSP 1 Score: 473.4 bits (1217), Expect = 1.1e-129
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF 60
           MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF
Sbjct: 1   MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF 60

Query: 61  KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC
Sbjct: 61  KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY 180
           LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY
Sbjct: 121 LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY 180

Query: 181 VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 230
           VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF
Sbjct: 181 VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 229

[Close]

BLAST of CmoCh15G012610 vs. NCBI nr
Match: KAG6579478.1 (Dehydration-responsive element-binding protein 1C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 471.5 bits (1212), Expect = 4.2e-129
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF 60
           MDLFS FSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF
Sbjct: 1   MDLFSHFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF 60

Query: 61  KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC
Sbjct: 61  KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY 180
           LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY
Sbjct: 121 LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY 180

Query: 181 VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 230
           VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF
Sbjct: 181 VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 229

[Close]

BLAST of CmoCh15G012610 vs. NCBI nr
Match: XP_023551430.1 (dehydration-responsive element-binding protein 1A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 465.7 bits (1197), Expect = 2.3e-127
Identity = 226/229 (98.69%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF 60
           MDLFSQFSDPLPYYGNCNYNSESSS FFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF
Sbjct: 1   MDLFSQFSDPLPYYGNCNYNSESSSPFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF 60

Query: 61  KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC
Sbjct: 61  KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY 180
           LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPD+PVY
Sbjct: 121 LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDRPVY 180

Query: 181 VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 230
           VDDEALSNMPMLLANMAEGLLLSPPSF VNDDVEWDDVAMSHDVSLWNF
Sbjct: 181 VDDEALSNMPMLLANMAEGLLLSPPSFWVNDDVEWDDVAMSHDVSLWNF 229

[Close]

BLAST of CmoCh15G012610 vs. NCBI nr
Match: XP_038906461.1 (dehydration-responsive element-binding protein 1E-like [Benincasa hispida])

HSP 1 Score: 391.7 bits (1005), Expect = 4.2e-105
Identity = 195/230 (84.78%), Postives = 206/230 (89.57%), Query Frame = 0


Query: 1   MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTV-ATSDEEVILASNQPKRPAGRRV 60
           M+ F+QFSDPLPYY +CNY SESSS   DAGT P TV A SDEEVILASN+PKR AGRRV
Sbjct: 1   MEWFAQFSDPLPYYAHCNYKSESSSTLSDAGTPPQTVAANSDEEVILASNRPKRRAGRRV 60

Query: 61  FKETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSA 120
           FKETRHPVYRGVRRRNNDKWVCE+REPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSA
Sbjct: 61  FKETRHPVYRGVRRRNNDKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSA 120

Query: 121 CLNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPV 180
           CLNFADSAWRFP+PASDDP+VIR AAA AANECKDEE N  REEDD VL Q TA P+QP 
Sbjct: 121 CLNFADSAWRFPLPASDDPAVIREAAARAANECKDEEYNVGREEDDGVLGQATAEPNQPD 180

Query: 181 YVDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 230
           Y+DDEA+SNMPMLLA MAEGLLLSPPSFCV DDVEWDDVAMS DVSLW+F
Sbjct: 181 YIDDEAMSNMPMLLAGMAEGLLLSPPSFCVTDDVEWDDVAMSDDVSLWSF 230

[Close]

BLAST of CmoCh15G012610 vs. NCBI nr
Match: KAG7016947.1 (Dehydration-responsive element-binding protein 1C, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.8 bits (987), Expect = 5.2e-103
Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 43  EVILASNQPKRPAGRRVFKETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEM 102
           ++ILASNQPKRPAGRRVFKETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEM
Sbjct: 264 DLILASNQPKRPAGRRVFKETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEM 323

Query: 103 AARAHDVAALALRGKSACLNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACRE 162
           AARAHDVAALALRGKSACLNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACRE
Sbjct: 324 AARAHDVAALALRGKSACLNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACRE 383

Query: 163 EDDVVLCQPTASPDQPVYVDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSH 222
           EDDVVLCQPTASPDQPVYVDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSH
Sbjct: 384 EDDVVLCQPTASPDQPVYVDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSH 443

Query: 223 DVSLWNF 230
           DVSLWNF
Sbjct: 444 DVSLWNF 450

[Close]

BLAST of CmoCh15G012610 vs. TAIR 10
Match: AT4G25480.1 (dehydration response element B1A )

HSP 1 Score: 203.4 bits (516), Expect = 2.0e-52
Identity = 114/192 (59.38%), Postives = 135/192 (70.31%), Query Frame = 0


Query: 46  LASNQPKRPAGRRVFKETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAAR 105
           LAS+ PK+PAGR+ F+ETRHP+YRGVRRRN+ KWVCE+REPNKKTRIWLGT+ TAEMAAR
Sbjct: 29  LASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAAR 88

Query: 106 AHDVAALALRGKSACLNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNAC----- 165
           AHDVAALALRG+SACLNFADSAWR  IP S     I+ AAA AA   +DE C+A      
Sbjct: 89  AHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCDATTDHGF 148

Query: 166 -REEDDVVLCQPTASPDQPVYVDDEALSNMPMLLANMAEGLLLSPPS--FCVNDDVEWDD 225
             EE  V         +   Y+ DEA+  MP LLANMAEG+LL  PS  +  N +V+ DD
Sbjct: 149 DMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEGMLLPLPSVQWNHNHEVDGDD 208

Query: 226 VAMSHDVSLWNF 230
                DVSLW++
Sbjct: 209 ----DDVSLWSY 216

[Close]

BLAST of CmoCh15G012610 vs. TAIR 10
Match: AT4G25470.1 (C-repeat/DRE binding factor 2 )

HSP 1 Score: 199.1 bits (505), Expect = 3.8e-51
Identity = 110/193 (56.99%), Postives = 138/193 (71.50%), Query Frame = 0


Query: 46  LASNQPKRPAGRRVFKETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAAR 105
           LA++ PK+PAGR+ F+ETRHP+YRGVR+RN+ KWVCE+REPNKKTRIWLGT+ TAEMAAR
Sbjct: 29  LATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAEMAAR 88

Query: 106 AHDVAALALRGKSACLNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACRE--- 165
           AHDVAA+ALRG+SACLNFADSAWR  IP S     I+ AAA AA   +DE C+   +   
Sbjct: 89  AHDVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQKAAAEAALNFQDEMCHMTTDAHG 148

Query: 166 -EDDVVLCQPTASPDQ---PVYVDDEALSNMPMLLANMAEGLLLSPPS--FCVNDDVEWD 225
            + +  L +   +P+Q     Y+D+EA+  M  LL NMAEG+LL  PS  +  N DVE D
Sbjct: 149 LDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGMLLPSPSVQWNYNFDVEGD 208

Query: 226 DVAMSHDVSLWNF 230
           D     DVSLW++
Sbjct: 209 D-----DVSLWSY 216

[Close]

BLAST of CmoCh15G012610 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-49
Identity = 108/194 (55.67%), Postives = 131/194 (67.53%), Query Frame = 0


Query: 46  LASNQPKRPAGRRVFKETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAAR 105
           LA++ PK+PAGR+ F+ETRHP+YRGVR+RN+ KWV E+REPNKKTRIWLGT+ TAEMAAR
Sbjct: 26  LATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAAR 85

Query: 106 AHDVAALALRGKSACLNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNAC----- 165
           AHDVAALALRG+SACLNFADSAWR  IP S     I+ AAA AA   +DE C+       
Sbjct: 86  AHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHG 145

Query: 166 --REEDDVVLCQPTASPDQPVYVDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWD-- 225
              EE  V         +   Y+D+E +  MP LL NMAEG+LL PPS      V+W+  
Sbjct: 146 LDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPS------VQWNHN 205

Query: 226 -DVAMSHDVSLWNF 230
            D     DVSLW++
Sbjct: 206 YDGEGDGDVSLWSY 213

[Close]

BLAST of CmoCh15G012610 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 189.1 bits (479), Expect = 3.9e-48
Identity = 114/223 (51.12%), Postives = 141/223 (63.23%), Query Frame = 0


Query: 19  YNSESSSAFFDAGTHPLTVATSDE-EVILASNQPKRPAGRRVFKETRHPVYRGVRRRNND 78
           + S    +F     H   V+ S E    LAS+ PK+ AGR+ F+ETRHP+YRGVR+RN+ 
Sbjct: 4   FYSTFPDSFLSISDHRSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSG 63

Query: 79  KWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSACLNFADSAWRFPIPASDD 138
           KWVCE+REPNKK+RIWLGT+PT EMAARAHDVAALALRG+SACLNFADSAWR  IP +  
Sbjct: 64  KWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTC 123

Query: 139 PSVIRAAAAMAA----NECKDEECNACREEDDV----VLCQPTASPDQ---PVYVDDEAL 198
           P  I+ AA+ AA    NE   E      E ++     V      + +Q     Y+DDEAL
Sbjct: 124 PKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEAL 183

Query: 199 SNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 230
             MP    NMAEG+LL PP    N + ++D V    DVSLW+F
Sbjct: 184 LGMPNFFENMAEGMLLPPPEVGWNHN-DFDGVG---DVSLWSF 222

[Close]

BLAST of CmoCh15G012610 vs. TAIR 10
Match: AT1G63030.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-45
Identity = 97/191 (50.79%), Postives = 127/191 (66.49%), Query Frame = 0


Query: 41  DEEVILASNQPKRPAGRRVFKETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTA 100
           ++++ +A  +PK+ AGRR+FKETRHP+YRGVRRR+ DKWVCE+REP  + R+WLGTYPTA
Sbjct: 3   NDDITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTA 62

Query: 101 EMAARAHDVAALALRGKSACLNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNAC 160
           +MAARAHDVA LALRG+SACLNF+DSAWR P+PAS DP  IR  AA AA   +  E +  
Sbjct: 63  DMAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEFST- 122

Query: 161 REEDDVVLCQPTASPDQPVYVDDEALSNMPMLLANMAEGLLLSPPSFCV--NDDVEWDDV 220
                 +   P+AS        DE ++ M M    +AE  L+SPP   +  N  V  D+ 
Sbjct: 123 -----GITVLPSASEFD---TSDEGVAGMMM---RLAEEPLMSPPRSYIDMNTSVYVDEE 181

Query: 221 AMSHDVSLWNF 230
               D+SLW++
Sbjct: 183 MCYEDLSLWSY 181

The following BLAST results are available for this feature:

BLAST of CmoCh15G012610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0L0	2.8e-51	59.38	Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=370...	[more]
Q9SYS6	5.3e-50	56.99	Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=370...	[more]
P93835	1.7e-48	55.67	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]
Q9FJ93	5.5e-47	51.12	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]
Q9SGJ6	1.5e-44	50.79	Dehydration-responsive element-binding protein 1E OS=Arabidopsis thaliana OX=370...	[more]

BLAST of CmoCh15G012610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E8J8	5.4e-130	100.00	dehydration-responsive element-binding protein 1A-like OS=Cucurbita moschata OX=...	[more]
A0A5A7TJ39	1.8e-101	81.22	Dehydration-responsive element-binding protein 1E OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3ATG1	1.8e-101	81.22	dehydration-responsive element-binding protein 1E OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1H1W9	9.9e-100	80.79	dehydration-responsive element-binding protein 1E-like isoform X1 OS=Cucurbita m...	[more]
A0A6J1K939	1.1e-98	80.79	dehydration-responsive element-binding protein 1C-like OS=Cucurbita maxima OX=36...	[more]

BLAST of CmoCh15G012610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922370.1	1.1e-129	100.00	dehydration-responsive element-binding protein 1A-like [Cucurbita moschata]	[more]
KAG6579478.1	4.2e-129	99.56	Dehydration-responsive element-binding protein 1C, partial [Cucurbita argyrosper...	[more]
XP_023551430.1	2.3e-127	98.69	dehydration-responsive element-binding protein 1A-like [Cucurbita pepo subsp. pe...	[more]
XP_038906461.1	4.2e-105	84.78	dehydration-responsive element-binding protein 1E-like [Benincasa hispida]	[more]
KAG7016947.1	5.2e-103	98.93	Dehydration-responsive element-binding protein 1C, partial [Cucurbita argyrosper...	[more]

BLAST of CmoCh15G012610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25480.1	2.0e-52	59.38	dehydration response element B1A	[more]
AT4G25470.1	3.8e-51	56.99	C-repeat/DRE binding factor 2	[more]
AT4G25490.1	1.2e-49	55.67	C-repeat/DRE binding factor 1	[more]
AT5G51990.1	3.9e-48	51.12	C-repeat-binding factor 4	[more]
AT1G63030.1	1.1e-45	50.79	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 90..106 score: 67.06 coord: 68..79 score: 57.88
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 67..130 e-value: 4.1E-28 score: 109.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 66..116 e-value: 1.1E-14 score: 54.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 67..124 score: 21.983412
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 68..126 e-value: 3.00653E-32 score: 110.054
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 67..125 e-value: 5.0E-23 score: 83.0
None	No IPR available	PANTHER	PTHR31839	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D	coord: 1..229
None	No IPR available	PANTHER	PTHR31839:SF64	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1F	coord: 1..229
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 67..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G012610.1	CmoCh15G012610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity