CmoCh15G012310 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G012310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	PPR containing protein
Location	Cmo_Chr15: 8486902 .. 8488638 (+)
RNA-Seq Expression	CmoCh15G012310
Synteny	CmoCh15G012310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGTCTCAGAACTGTCAACTACTTCCGCTTTCCCTTCCCGCAAACTTCAACTCCCACTCCCCTTCGCCTCACAAACCCACCGGAAACAGTTACACCGCCGCGATTAATGTCGACCAGCAGTTTCCGTCGGAGAATTCCTGCTATTTCTCGTCTCACTAACAAGTCGTGCCGGAATCTCTCTCCGTCTCCTCACCGGAAAACTCCCCCGATGAATCGCGCTCCTTCTCTGTCCTCCAAGTTATCCAGATGCTCCTCGGATCCCCAGTTTTGGACCACCGCTGCCGCCAGTGGAGATGATCGGAATATGTCGTCCGAGAAGGAAGGGGAAGAGGTTATTATTTTCCGTCCTCATACGTTTTCGGAAGCCTTTGCTTCATCCCCTCTGTTGATTCCTTCCCCCGCTCAAATCGTCGAGGTTAGGGTTCCGAATCTTACTGTTCAAGATTTTTTTCTAATTACCTAATTTATCAGTCTCCGCGGAAAGAAAGTCTTCATCAATTTCAATTGATTTCAATTGATTTCCAATTACGAATCCGTGAACTCTGCTTTTGATCAAATAGCCAGAAAAGGAGGAATAGCTAATGCGTCATTGTTAATCTTACACTTCGTGTTCGATTTGTTTATTTTATTCTTCGACATTAATTCCTGAGATACATAATCTTTCTTCCTGTCTAAGTAATCATCTGATCTTGCCTTTTCTGCTCTGTAATCGTATGTTCGGATCAATGATGGATCGGCTGTTTAGGTCTTTTCTGAAATTAGCTTCATAAATCCATTGTTTATTGAGTCAATTTTAGCATAGAAAGACACAGAGATTGAAGCGCGATTCTGCAATGCAGGGCTACAAGAAAGACGCCAAGGTGGTGATCAATGTGACTGTTGAAGGGAGCCCAGGGCCAGTACGAGCCATGGTTAAACTCGGATCCAGTGTGGAGGAGACGATCAAGCTTGTTGTTGCTAAATATAGTGAAGAAGGAAGGACTCCAAAACTTGAACGAGATTCAGCATCTTCCTATGAATTGCATCACTCATATTTCAGCCTCCGGAGTATGTCAAATTTTGTTCACTTTCAATTCATTGGAAATCTCTTACACTCTCCTGAGAAACCCCATTGAGTAGCAATCTGAAGTTGATCCAATGTGGTACTAAACGCTTCTGTTTTCTCCTCTGCTCAGGTCTTGACAGGGCAGAAATAATTGGGGAAATTGGTAGCAGAAGCTTCTATCTTCGAACCAGCAATAGCTCTGATGCCAAAAATGGCGGAGAATCAGCTGGCTGCACTCAAGAGATTACCAAAGAAACCATAATTGCTTCACCAATTCCTCCTGGGTTCTTGCTTTCTAGCTTCATTGCCAGGAAAATGGGCAAAATTATACGAAGAACAAGAAAGCTCTGGAACTTCATAATCTGCGTGAAATGAGTCTAACCCAAGAATTAGACATGTTTCTGAAGAGTAACACAGAATATTAAATATGTCACTCTTTTTAACAAATATTTTCCCATTTCTGTATTGTATCCTCTCTTTTTTTTCTTGTCCACCAAACCCTTGCATATTTATAGGAGGGGAATCCTAAAAAATCTTCAAAATAAACTGTACATAGTATAGCACATATTCTTATTTACAGACATTGTACTATTGCAAGATTGTAATTGTTGGTAAATAGAAAGCCAGTTCTATACCAAAACTTTTATTCACATTCTTTCAGCAATTTTGTAATTGTTGGCCCTCTTCGCCG

mRNA sequence

ATTGTCTCAGAACTGTCAACTACTTCCGCTTTCCCTTCCCGCAAACTTCAACTCCCACTCCCCTTCGCCTCACAAACCCACCGGAAACAGTTACACCGCCGCGATTAATGTCGACCAGCAGTTTCCGTCGGAGAATTCCTGCTATTTCTCGTCTCACTAACAAGTCGTGCCGGAATCTCTCTCCGTCTCCTCACCGGAAAACTCCCCCGATGAATCGCGCTCCTTCTCTGTCCTCCAAGTTATCCAGATGCTCCTCGGATCCCCAGTTTTGGACCACCGCTGCCGCCAGTGGAGATGATCGGAATATGTCGTCCGAGAAGGAAGGGGAAGAGGTTATTATTTTCCGTCCTCATACGTTTTCGGAAGCCTTTGCTTCATCCCCTCTGTTGATTCCTTCCCCCGCTCAAATCGTCGAGCATAGAAAGACACAGAGATTGAAGCGCGATTCTGCAATGCAGGGCTACAAGAAAGACGCCAAGGTGGTGATCAATGTGACTGTTGAAGGGAGCCCAGGGCCAGTACGAGCCATGGTTAAACTCGGATCCAGTGTGGAGGAGACGATCAAGCTTGTTGTTGCTAAATATAGTGAAGAAGGAAGGACTCCAAAACTTGAACGAGATTCAGCATCTTCCTATGAATTGCATCACTCATATTTCAGCCTCCGGAGTCTTGACAGGGCAGAAATAATTGGGGAAATTGGTAGCAGAAGCTTCTATCTTCGAACCAGCAATAGCTCTGATGCCAAAAATGGCGGAGAATCAGCTGGCTGCACTCAAGAGATTACCAAAGAAACCATAATTGCTTCACCAATTCCTCCTGGGTTCTTGCTTTCTAGCTTCATTGCCAGGAAAATGGGCAAAATTATACGAAGAACAAGAAAGCTCTGGAACTTCATAATCTGCGTGAAATGAGTCTAACCCAAGAATTAGACATGTTTCTGAAGAGTAACACAGAATATTAAATATGTCACTCTTTTTAACAAATATTTTCCCATTTCTGTATTGTATCCTCTCTTTTTTTTCTTGTCCACCAAACCCTTGCATATTTATAGGAGGGGAATCCTAAAAAATCTTCAAAATAAACTGTACATAGTATAGCACATATTCTTATTTACAGACATTGTACTATTGCAAGATTGTAATTGTTGGTAAATAGAAAGCCAGTTCTATACCAAAACTTTTATTCACATTCTTTCAGCAATTTTGTAATTGTTGGCCCTCTTCGCCG

Coding sequence (CDS)

ATGTCGACCAGCAGTTTCCGTCGGAGAATTCCTGCTATTTCTCGTCTCACTAACAAGTCGTGCCGGAATCTCTCTCCGTCTCCTCACCGGAAAACTCCCCCGATGAATCGCGCTCCTTCTCTGTCCTCCAAGTTATCCAGATGCTCCTCGGATCCCCAGTTTTGGACCACCGCTGCCGCCAGTGGAGATGATCGGAATATGTCGTCCGAGAAGGAAGGGGAAGAGGTTATTATTTTCCGTCCTCATACGTTTTCGGAAGCCTTTGCTTCATCCCCTCTGTTGATTCCTTCCCCCGCTCAAATCGTCGAGCATAGAAAGACACAGAGATTGAAGCGCGATTCTGCAATGCAGGGCTACAAGAAAGACGCCAAGGTGGTGATCAATGTGACTGTTGAAGGGAGCCCAGGGCCAGTACGAGCCATGGTTAAACTCGGATCCAGTGTGGAGGAGACGATCAAGCTTGTTGTTGCTAAATATAGTGAAGAAGGAAGGACTCCAAAACTTGAACGAGATTCAGCATCTTCCTATGAATTGCATCACTCATATTTCAGCCTCCGGAGTCTTGACAGGGCAGAAATAATTGGGGAAATTGGTAGCAGAAGCTTCTATCTTCGAACCAGCAATAGCTCTGATGCCAAAAATGGCGGAGAATCAGCTGGCTGCACTCAAGAGATTACCAAAGAAACCATAATTGCTTCACCAATTCCTCCTGGGTTCTTGCTTTCTAGCTTCATTGCCAGGAAAATGGGCAAAATTATACGAAGAACAAGAAAGCTCTGGAACTTCATAATCTGCGTGAAATGA

Protein sequence

MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAAASGDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVEHRKTQRLKRDSAMQGYKKDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHHSYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKETIIASPIPPGFLLSSFIARKMGKIIRRTRKLWNFIICVK

Homology

[Close]

BLAST of CmoCh15G012310 vs. ExPASy Swiss-Prot
Match: Q56XJ7 (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-36
Identity = 113/278 (40.65%), Postives = 154/278 (55.40%), Query Frame = 0


Query: 1   MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAAA 60
           MS S  RR++        +S R    +    +   NR+ S +    R  S+P        
Sbjct: 1   MSDSIHRRKVSNPVGNGGRSSRTRRTAFRYVSDKNNRSKSSNKVFERSFSEPSLNRHRDG 60

Query: 61  SGDDRNMSSEKEG----EEV--IIFRPHTFSEAFASSPLLI----PSPAQIVEHRKTQRL 120
             +     S   G    EE   I++ P   SE FASSP L+    PS +  +        
Sbjct: 61  QSNHLRRPSPMRGLPMEEETKPIVYLPRIRSEVFASSPSLLNLYSPSSSSPIN------- 120

Query: 121 KRDSAMQGYKKDA-KVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLE 180
                 +G  K+A KV+I+V VEGSPGPVRAMVKL  +VEETIK+VV KY +EGRTPKL+
Sbjct: 121 -----QEGNTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLD 180

Query: 181 RDSASSYELHHSYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKET 240
           RDSA  +ELH S+FS++ L++ EIIGE+GSRSFY+R       + GG  AG +   T   
Sbjct: 181 RDSA--FELHQSHFSIQCLEKREIIGELGSRSFYMR---KKAPETGGSFAGISPART--- 240

Query: 241 IIASPIPPGFLLSSFIARKMGKIIRRTRKLWNFIICVK 268
              S IP   L+ S IA+ +GKI+RRTR++WN ++CV+
Sbjct: 241 ---SLIPSSNLIGSCIAQLIGKIMRRTRRIWNILVCVQ 255

[Close]

BLAST of CmoCh15G012310 vs. ExPASy TrEMBL
Match: A0A6J1E662 (uncharacterized protein At4g22758 OS=Cucurbita moschata OX=3662 GN=LOC111430315 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 6.7e-132
Identity = 253/267 (94.76%), Postives = 253/267 (94.76%), Query Frame = 0


Query: 1   MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAAA 60
           MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAAA
Sbjct: 1   MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAAA 60

Query: 61  SGDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVEHRKTQRLKRDSAMQGYK 120
           SGDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVE              GYK
Sbjct: 61  SGDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVE--------------GYK 120

Query: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180
           KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH
Sbjct: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180

Query: 181 SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKETIIASPIPPGFL 240
           SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKETIIASPIPPGFL
Sbjct: 181 SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKETIIASPIPPGFL 240

Query: 241 LSSFIARKMGKIIRRTRKLWNFIICVK 268
           LSSFIARKMGKIIRRTRKLWNFIICVK
Sbjct: 241 LSSFIARKMGKIIRRTRKLWNFIICVK 253

[Close]

BLAST of CmoCh15G012310 vs. ExPASy TrEMBL
Match: A0A6J1I3T9 (uncharacterized protein At4g22758 OS=Cucurbita maxima OX=3661 GN=LOC111468922 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.8e-129
Identity = 247/267 (92.51%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 1   MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAAA 60
           MS+SSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWT AAA
Sbjct: 1   MSSSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTVAAA 60

Query: 61  SGDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVEHRKTQRLKRDSAMQGYK 120
           SGDDRNM+SEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVE              GYK
Sbjct: 61  SGDDRNMTSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVE--------------GYK 120

Query: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180
           KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH
Sbjct: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180

Query: 181 SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKETIIASPIPPGFL 240
           SYFSLRSLDRAEIIGEIGSRSFYLRTSNSS AKNGGESAGCTQEITKETIIASPIPPGFL
Sbjct: 181 SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSHAKNGGESAGCTQEITKETIIASPIPPGFL 240

Query: 241 LSSFIARKMGKIIRRTRKLWNFIICVK 268
           LSSFIARKMGKI+RRTRKLWNFI+CVK
Sbjct: 241 LSSFIARKMGKIVRRTRKLWNFIVCVK 253

[Close]

BLAST of CmoCh15G012310 vs. ExPASy TrEMBL
Match: A0A6J1DSY8 (uncharacterized protein At4g22758 OS=Momordica charantia OX=3673 GN=LOC111023648 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 5.4e-89
Identity = 191/279 (68.46%), Postives = 212/279 (75.99%), Query Frame = 0


Query: 1   MSTSSFRRRIPAISRLTNKSCR-NLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTT-A 60
           MS+SSFRRRIP  S L+N   R NLSPSP R TPP NR PS  SK +RCSS+P  WT  A
Sbjct: 35  MSSSSFRRRIPPTSGLSNNIRRQNLSPSPRRATPPRNRRPSKPSKFTRCSSEPNLWTADA 94

Query: 61  AASGDDRNMS-------SEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVEHRKTQRLK 120
            A+ DD N         SE+EG E I+FRPHTFSEAFASSPLLIPSP +           
Sbjct: 95  NANADDANADAGDGDERSEREG-EAILFRPHTFSEAFASSPLLIPSPRR----------- 154

Query: 121 RDSAMQGYKKDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERD 180
                +GYKKDAKVVINVTVEGSPGPVR MVKLGSSVEETIKLVVAKY EEGRTPKLERD
Sbjct: 155 ---GFEGYKKDAKVVINVTVEGSPGPVRTMVKLGSSVEETIKLVVAKYGEEGRTPKLERD 214

Query: 181 SASSYELHHSYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKET-- 240
           SAS++ELHHSYFSL+SLDRAEIIGEIGSRSFYLR SN+S     GE+  C+QEI KET  
Sbjct: 215 SASAFELHHSYFSLQSLDRAEIIGEIGSRSFYLRKSNNS----SGEAGDCSQEIGKETRD 274

Query: 241 -IIASPIPPGFLLSSFIARKMGKIIRRTRKLWNFIICVK 268
             +A PIPPGFLL+ FIARKM KI+RRTRK+WNFI+C+K
Sbjct: 275 VAVAPPIPPGFLLTGFIARKMAKIVRRTRKIWNFIVCLK 294

[Close]

BLAST of CmoCh15G012310 vs. ExPASy TrEMBL
Match: A0A0A0KKG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157970 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.9e-86
Identity = 188/273 (68.86%), Postives = 213/273 (78.02%), Query Frame = 0


Query: 1   MSTSSFRRRIPAISRLTNKSCRN-LSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAA 60
           MST+SFRRRIPAIS  +N   R+ L  SPHR+TP  NR PS  SK +RCSS+P  WTTA 
Sbjct: 1   MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI 60

Query: 61  AS-GDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVEHRKTQRLKRDSAMQG 120
            S   DRN SSEKEGEEV+IFRPHTFSEAFASSPLLIPS  Q++E              G
Sbjct: 61  TSAAADRNFSSEKEGEEVVIFRPHTFSEAFASSPLLIPSTDQLLE--------------G 120

Query: 121 YKKDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLE-RDSASSYE 180
           YKKDAKVVINVTVEGSPGPVRAMVKLGS+V++TIKLVVAKY EEGRTPKLE   S SS+E
Sbjct: 121 YKKDAKVVINVTVEGSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFE 180

Query: 181 LHHSYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCT-QEITKETI--IASP 240
           LH SYFSL+SLDR +IIGE+GSRSFYLR +      +GGES+  + + ITKET+  +A P
Sbjct: 181 LHRSYFSLQSLDRRDIIGELGSRSFYLRKT------HGGESSTTSPRGITKETMDDVALP 240

Query: 241 IPPGFLLSSFIARKMGKIIRRTRKLWNFIICVK 268
           IPPGFLLSSF ARKMGKI+RRTRKLWNFIIC+K
Sbjct: 241 IPPGFLLSSFFARKMGKIVRRTRKLWNFIICLK 253

[Close]

BLAST of CmoCh15G012310 vs. ExPASy TrEMBL
Match: A0A5A7THG0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003530 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 5.5e-86
Identity = 188/272 (69.12%), Postives = 212/272 (77.94%), Query Frame = 0


Query: 1   MSTSSFRRRIPAISRLTNKSCR-NLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAA 60
           MST++FRRRIPAISR T+   R NLS SPHR+TP  NRAPS  S  +RCSS+P  WTTA 
Sbjct: 1   MSTTAFRRRIPAISRTTDNHTRHNLSQSPHRRTPSTNRAPSKPSNFNRCSSEPNLWTTAI 60

Query: 61  AS-GDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVEHRKTQRLKRDSAMQG 120
            S   DR  SSEKEGEEV+IFRPHTFSEAF SSPLLIPS  Q++E              G
Sbjct: 61  TSAAADRTFSSEKEGEEVVIFRPHTFSEAFGSSPLLIPSTDQLLE--------------G 120

Query: 121 YKKDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLER-DSASSYE 180
           YKKDAKVVINVTVEGSPGPVRAMVKLGS+V++TIKLVVAKY EEGRTPKLE   S SS+E
Sbjct: 121 YKKDAKVVINVTVEGSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPITSPSSFE 180

Query: 181 LHHSYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESA-GCTQEITKETI-IASPI 240
           LHHSYFSL+SLDR +IIGE+GSRSFYLR +       GGES+   T+EI KET+ +A PI
Sbjct: 181 LHHSYFSLQSLDRKDIIGELGSRSFYLRKT------YGGESSTASTREIIKETMDVALPI 240

Query: 241 PPGFLLSSFIARKMGKIIRRTRKLWNFIICVK 268
           PPGFLLSSFIARKM KIIRRT+KL NFI+C+K
Sbjct: 241 PPGFLLSSFIARKMSKIIRRTKKLCNFIVCLK 252

[Close]

BLAST of CmoCh15G012310 vs. NCBI nr
Match: XP_022922293.1 (uncharacterized protein At4g22758 [Cucurbita moschata])

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-131
Identity = 253/267 (94.76%), Postives = 253/267 (94.76%), Query Frame = 0


Query: 1   MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAAA 60
           MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAAA
Sbjct: 1   MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAAA 60

Query: 61  SGDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVEHRKTQRLKRDSAMQGYK 120
           SGDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVE              GYK
Sbjct: 61  SGDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVE--------------GYK 120

Query: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180
           KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH
Sbjct: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180

Query: 181 SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKETIIASPIPPGFL 240
           SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKETIIASPIPPGFL
Sbjct: 181 SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKETIIASPIPPGFL 240

Query: 241 LSSFIARKMGKIIRRTRKLWNFIICVK 268
           LSSFIARKMGKIIRRTRKLWNFIICVK
Sbjct: 241 LSSFIARKMGKIIRRTRKLWNFIICVK 253

[Close]

BLAST of CmoCh15G012310 vs. NCBI nr
Match: KAG7016920.1 (hypothetical protein SDJN02_22031, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475.3 bits (1222), Expect = 3.4e-130
Identity = 251/267 (94.01%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 1   MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAAA 60
           MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWT AAA
Sbjct: 1   MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTAAAA 60

Query: 61  SGDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVEHRKTQRLKRDSAMQGYK 120
           SGDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVE              GYK
Sbjct: 61  SGDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVE--------------GYK 120

Query: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180
           KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH
Sbjct: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180

Query: 181 SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKETIIASPIPPGFL 240
           SYFSLRSLDRAEIIGEIGSRSFYLRTSNSS AKNGGESAGCTQEITKETIIASPIPPGFL
Sbjct: 181 SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSHAKNGGESAGCTQEITKETIIASPIPPGFL 240

Query: 241 LSSFIARKMGKIIRRTRKLWNFIICVK 268
           LSSFIARKMGKIIRRTRKLWNFIICVK
Sbjct: 241 LSSFIARKMGKIIRRTRKLWNFIICVK 253

[Close]

BLAST of CmoCh15G012310 vs. NCBI nr
Match: KAG6579447.1 (hypothetical protein SDJN03_23895, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 473.0 bits (1216), Expect = 1.7e-129
Identity = 250/267 (93.63%), Postives = 250/267 (93.63%), Query Frame = 0


Query: 1   MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAAA 60
           MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWT AAA
Sbjct: 1   MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTAAAA 60

Query: 61  SGDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVEHRKTQRLKRDSAMQGYK 120
           SGDDRNMSSEKEGEEVIIFRPHTFSEA ASSPLLIPSPAQIVE              GYK
Sbjct: 61  SGDDRNMSSEKEGEEVIIFRPHTFSEALASSPLLIPSPAQIVE--------------GYK 120

Query: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180
           KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH
Sbjct: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180

Query: 181 SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKETIIASPIPPGFL 240
           SYFSLRSLDRAEIIGEIGSRSFYLRTSNSS AKNGGESAGCTQEITKETIIASPIPPGFL
Sbjct: 181 SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSHAKNGGESAGCTQEITKETIIASPIPPGFL 240

Query: 241 LSSFIARKMGKIIRRTRKLWNFIICVK 268
           LSSFIARKMGKIIRRTRKLWNFIICVK
Sbjct: 241 LSSFIARKMGKIIRRTRKLWNFIICVK 253

[Close]

BLAST of CmoCh15G012310 vs. NCBI nr
Match: XP_023551145.1 (uncharacterized protein At4g22758 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 472.6 bits (1215), Expect = 2.2e-129
Identity = 248/267 (92.88%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 1   MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAAA 60
           MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWT AAA
Sbjct: 1   MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTAAAA 60

Query: 61  SGDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVEHRKTQRLKRDSAMQGYK 120
           SGDDRNM+SEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVE              GYK
Sbjct: 61  SGDDRNMTSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVE--------------GYK 120

Query: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180
           KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH
Sbjct: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180

Query: 181 SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKETIIASPIPPGFL 240
           SYFSLRSLDRAEIIGEIGSRSFYLRTSNSS AKNGGESAGCTQEITKETIIASPIPPGFL
Sbjct: 181 SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSHAKNGGESAGCTQEITKETIIASPIPPGFL 240

Query: 241 LSSFIARKMGKIIRRTRKLWNFIICVK 268
           LSSFIARKMGKI+RRTR+LWNFIICVK
Sbjct: 241 LSSFIARKMGKIVRRTRRLWNFIICVK 253

[Close]

BLAST of CmoCh15G012310 vs. NCBI nr
Match: XP_022969839.1 (uncharacterized protein At4g22758 [Cucurbita maxima])

HSP 1 Score: 471.9 bits (1213), Expect = 3.8e-129
Identity = 247/267 (92.51%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 1   MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAAA 60
           MS+SSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWT AAA
Sbjct: 1   MSSSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTVAAA 60

Query: 61  SGDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVEHRKTQRLKRDSAMQGYK 120
           SGDDRNM+SEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVE              GYK
Sbjct: 61  SGDDRNMTSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVE--------------GYK 120

Query: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180
           KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH
Sbjct: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180

Query: 181 SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKETIIASPIPPGFL 240
           SYFSLRSLDRAEIIGEIGSRSFYLRTSNSS AKNGGESAGCTQEITKETIIASPIPPGFL
Sbjct: 181 SYFSLRSLDRAEIIGEIGSRSFYLRTSNSSHAKNGGESAGCTQEITKETIIASPIPPGFL 240

Query: 241 LSSFIARKMGKIIRRTRKLWNFIICVK 268
           LSSFIARKMGKI+RRTRKLWNFI+CVK
Sbjct: 241 LSSFIARKMGKIVRRTRKLWNFIVCVK 253

[Close]

BLAST of CmoCh15G012310 vs. TAIR 10
Match: AT4G22758.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). )

HSP 1 Score: 154.8 bits (390), Expect = 9.5e-38
Identity = 113/278 (40.65%), Postives = 154/278 (55.40%), Query Frame = 0


Query: 1   MSTSSFRRRIPAISRLTNKSCRNLSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAAA 60
           MS S  RR++        +S R    +    +   NR+ S +    R  S+P        
Sbjct: 1   MSDSIHRRKVSNPVGNGGRSSRTRRTAFRYVSDKNNRSKSSNKVFERSFSEPSLNRHRDG 60

Query: 61  SGDDRNMSSEKEG----EEV--IIFRPHTFSEAFASSPLLI----PSPAQIVEHRKTQRL 120
             +     S   G    EE   I++ P   SE FASSP L+    PS +  +        
Sbjct: 61  QSNHLRRPSPMRGLPMEEETKPIVYLPRIRSEVFASSPSLLNLYSPSSSSPIN------- 120

Query: 121 KRDSAMQGYKKDA-KVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLE 180
                 +G  K+A KV+I+V VEGSPGPVRAMVKL  +VEETIK+VV KY +EGRTPKL+
Sbjct: 121 -----QEGNTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLD 180

Query: 181 RDSASSYELHHSYFSLRSLDRAEIIGEIGSRSFYLRTSNSSDAKNGGESAGCTQEITKET 240
           RDSA  +ELH S+FS++ L++ EIIGE+GSRSFY+R       + GG  AG +   T   
Sbjct: 181 RDSA--FELHQSHFSIQCLEKREIIGELGSRSFYMR---KKAPETGGSFAGISPART--- 240

Query: 241 IIASPIPPGFLLSSFIARKMGKIIRRTRKLWNFIICVK 268
              S IP   L+ S IA+ +GKI+RRTR++WN ++CV+
Sbjct: 241 ---SLIPSSNLIGSCIAQLIGKIMRRTRRIWNILVCVQ 255

[Close]

BLAST of CmoCh15G012310 vs. TAIR 10
Match: AT2G27830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-10
Identity = 39/106 (36.79%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 124 KVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHHSYF 183
           K+++NVTV+GS G V+ ++   S+V + I   V +Y +E R P L     S ++LH+S F
Sbjct: 71  KLLLNVTVQGSLGAVQIIISPESTVSDLIDAAVRQYVKEARRPFLPESEPSRFDLHYSQF 130

Query: 184 SLRSLDRAEIIGEIGSRSFYL--RTSNSSDAKNGGESAGCTQEITK 228
           SL S+ R E +  +GSR+F+L  R         G  S  C++E  K
Sbjct: 131 SLESIVRDEKLISLGSRNFFLCGRKETGGFIGCGLSSESCSKEAEK 176

[Close]

BLAST of CmoCh15G012310 vs. TAIR 10
Match: AT1G70780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 9.0e-04
Identity = 27/84 (32.14%), Postives = 43/84 (51.19%), Query Frame = 0


Query: 121 KDAKVVINVTVEGSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLERDSASSYELHH 180
           K  +++I+VTV GS GP+R +      V   I   +  Y+ EGR P L  D  + + L+ 
Sbjct: 14  KGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPLLGSD-FNDFLLYC 73

Query: 181 SYFSLRSLDRAEIIGEIGSRSFYL 205
                 +L   + IG +G+R+F L
Sbjct: 74  PMVGPEALSTWDAIGSLGARNFML 96

The following BLAST results are available for this feature:

BLAST of CmoCh15G012310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XJ7	1.3e-36	40.65	Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 P...	[more]

BLAST of CmoCh15G012310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E662	6.7e-132	94.76	uncharacterized protein At4g22758 OS=Cucurbita moschata OX=3662 GN=LOC111430315 ...	[more]
A0A6J1I3T9	1.8e-129	92.51	uncharacterized protein At4g22758 OS=Cucurbita maxima OX=3661 GN=LOC111468922 PE...	[more]
A0A6J1DSY8	5.4e-89	68.46	uncharacterized protein At4g22758 OS=Momordica charantia OX=3673 GN=LOC111023648...	[more]
A0A0A0KKG9	1.9e-86	68.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157970 PE=4 SV=1	[more]
A0A5A7THG0	5.5e-86	69.12	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CmoCh15G012310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922293.1	1.4e-131	94.76	uncharacterized protein At4g22758 [Cucurbita moschata]	[more]
KAG7016920.1	3.4e-130	94.01	hypothetical protein SDJN02_22031, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6579447.1	1.7e-129	93.63	hypothetical protein SDJN03_23895, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023551145.1	2.2e-129	92.88	uncharacterized protein At4g22758 [Cucurbita pepo subsp. pepo]	[more]
XP_022969839.1	3.8e-129	92.51	uncharacterized protein At4g22758 [Cucurbita maxima]	[more]

BLAST of CmoCh15G012310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22758.1	9.5e-38	40.65	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]
AT2G27830.1	1.7e-10	36.79	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G70780.1	9.0e-04	32.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..50
None	No IPR available	PANTHER	PTHR33270:SF6	BNAA02G21500D PROTEIN	coord: 7..267
IPR040358	Uncharacterized protein At4g22758-like	PANTHER	PTHR33270	BNAC05G50380D PROTEIN	coord: 7..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G012310.1	CmoCh15G012310.1	mRNA