CmoCh15G002720 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G002720
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	KH domain-containing protein
Location	Cmo_Chr15: 1306351 .. 1312140 (-)
RNA-Seq Expression	CmoCh15G002720
Synteny	CmoCh15G002720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGCGAAAGAAAATCAATTCCAAATATTTTCGTGGCAAAGTGCAATTTAGCGAAAGAAAAATCAAAACCCTAGACTCCGTCACAGAAAGTAAGTCCCGAGAATCAACGATCGTTCCTAAAACTCTCGATTGCGCGCAATCGGTCTTCGCCTTCCATTGCCCTCGTTTTTCTTCATTATCTGACAATTTTCAGGTTGATTCATTATCTTTAGCTTGTAAATTTCTTAATTTCTACGTCTTTCCCGTTCCGGATTTTGGATTCTGTTTTCGGTACCGATTGTTTCATTCGTGTTGCTCAATTCTGCGATCCTTTTGCGTTATGGTTGTATTCATTGTCTCGCTGTAATTACGCGGGACTGATGGTGCGGACGAATCGAGATCTAAACTTGCTTTCTTATAGCCTGTTGCAGTTGGTTAGTTTTACTTTTTCCGAAATTGTTTTCCTGCTTTTCGCTAATTTAACAAGAGCACTGCTCGGGAACAAAGTTTCTTATAGACGTCGAAAGAAGGCTAGAAATTGTCGTTCCTGCAGAAAGAAAACGAATTTCTGTCATGAAAGTAGCGACCTACAATCTTGCGTAATTCCTTGAATATATTGTTTCCTATTTCCTAGAGTTTTGTTATAACCAGCCGTCTTGTTGTGCAGTATGGGGTTAACATTTAATACCGGTTTATGGTATAAACCTAGTATTAACTAATATATTTATGCTATAACTGGTTCTCTTTTCTTATTATTGGCCTGAAACTTGAGTTTTTTGAGATTTTTACTGAGCAAGCTGCTTCCTTAGATGTGTATTATTACTGATATTGGACCATTTTCTTGTGGTGTGTTTTACGCACATGTGATGTGTAGCATATATGTTCAAATTATGATTTAGCTGGGATATGTTATGGCTGTTTGTGTTCTCTGTTGTCTTTTAATTTCTGGTTTACTCACATCTTCCGTTTTTTTTATGTGTGTAGACAGATATAACCAGTTTTTAAGTTCATGGCTGGTCAGAGGAATAGTTACGCAAAGCGTAATCGTTCTCAGTCTGATTATTCTGAAAATGGAGGGAACAAAAGAAGAAGTCATGGTGAGGACCGGGACCAGTTTATTATAGATCCAGAAGATACTGTTTACCGGTATTTGTGCCCTGTTAAAAAGATTGGAAGTGTTATTGGAAGGGGAGGTGAGATAGTGAAGCAGTTAAGGATAGATACTAAATCAAAGATTAGAATTGGAGAAACAGTGCCTGGATCTGATGAGCGTGTCATAACAATCTACAGCGCAAGCAATGAGGCTAATGCTTTGGAAGAAAGTAGTGATTATAGTTCTCCAGCTCAGCAGGCTTTGTTCAAAGTCCACCATAGAGTTGTGGCCGATGACCTAATGGGCGAGGAATCTGAAGGAGGAAGTCACCAGGTTACAGCTAGACTTCTTGTACCCTCTGATCAAATTGGTTGTATTATTGGGAAAGGTGGGCAGATTGTCCAGAATATTCGCACTGAGACTGGGGCCCTGATTCGCATTCTTAAGGATGATCATTTACCCCGTTGTGCTCTGAGTTCTGATGAACTTGTGCAGGTAAGTGGATGGCTTTCACTAAATTTTATTGTTTGCATTTCTGAGTTTTTTTAAGTTCATGCTTTTTTTTCTGTTGTAGCATTTTAATTTAGTTGTGTTTCAGATATCTGGTGAACCCCCGATTGTGGAGAAAGCCTTATACCAGATTGCATCTCGACTGCATGAAAATCCTTCACGATCTCAGCATCTACTTGCTTCTGCCATACCTGGTGTATATCCTTCTGGTGGTTCGCTTGTGGCTTCTACACATGGTGCTCCAATTATGGGTTTAGCTCCTTTGGTCAGTCCATATGGAGGTTATAAAGGGGACAGTGGTAATTGGTCCAGGTCTTTATATTCAGCTCCAAGGGAAGAATTATCTTCAAAAGAATTTTCTCTTCGATTGATATGTCCAACCGAAAACATTGGAGGTGTCATTGGCAAAGGTGGAGCTGTAATCAATCAGATTAGACAGGAGACTAAGGCTGCCATAAAAGTTGATAGTTCAGCTACTGAAGAAGATGATTGTTTGATAAATATATCATCAAAGGAGGTCTAATCTAAGCTTTTATAACTTTGTCTATTGTTGGCTGTGGATCATACTTCTGACAGTTTTATTGTATAATGTTTCAGTTCTTTGAAGATTCATATTCTCCCACGCTGGAAGCTGCATTGCGCTTGCAACCAAGGTGCAGTGAGAAAGTAGAAAGAGATTCTGGAATTATTTCATTCACAACCCGTCTGCTTGTGCCTACCTCACGAATTGGTTGCCTAATTGGTAAAGGTGGAGCTATCATTACCGAGTTGAGAAGGCTCACCAAAGCTAATATTCGAATACTGTCAAAGGAAAACCTCCCCAAGGTTGCCTTGGAAGATGATGAAATGGTGCAGGTAGTGGCTGTTAATTGATTTATATTAATTTTCCTGTTATGATGAACTCTCCCTTGTATTCCGTATTGCTTGTGTTTGCGTTCGGTTAATTGTATTGTTTTTCTGATTAGATATCCGGGGATCTTGATGTTGCCAAGGAGGCTCTTGTTCATATAGTGACCAGGTTGAGAGCCAACCTTTTTGATAGAGAAGGTGCTCTCTCAGCTGTTCTGCCTGTTCTGCCGTATCTTCCTCTATCAGCTGATGGTTCAGAAAGTCTATATGATGGTAGAGAAGGCAAAAGACATGGGCGTGGGCATTCTTATTCTAGTAGTTATGGGGGTTTCACGGATTTGGCTGCTGGTGATGGTTATGGAAGTTACAGTGGCTCACAGGTATGTATATTAACCTTGACATGTCTAATTTTAGAGATGGTGAAAATGTATCCTTCTGCTTTTAGAAGGCTAATTTGCAGACAAGGTTTTGAAATTATTTCAGTTGTGCACCTTTAAGCGAAGATTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTCTTTCGATTTATATATCTATAGGTTTCTAAATTCCTATAACCTTCCTTCCAATTGGTCCCTCAAACTTCAATTATTTGTGGTTGCAAGAGAAGAATGATGCATGGGTATGTCCATGTCCCCCATTTCCCTCTCATTGCCCCATAATACTCCCTCCAATTATATGCCACTTCCCTACTTATATAATCCCCCATATTAAAACCAAAAACCAATGCTTCATTATTGCCAACATTCTTCCCATTTACTACTCATCTCTATCTCTTTGCAGAGGAGTAAGGACTAAACCAACCCCTCTCTTCAATTATTGCTCATCTTCCCTATGCCCATTCATTCATTGCCTACACAGTAACTGTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCATGATCATTTACCTATTATTGATCCAAATTTAATGCCGAGATTTCTAATTTGCAACTGAAGCCAAGCTTTTCCTTTGTAGATTGGTGGTGGTGGTAGTGCTTATGGGGCCTATGGAAGCTTTTCCATGGGACGAAGTGGTAGTTCAGGGTAAATTATTCTTTTCTTCTTCATTTAGTGGTGTTAATCTTGAAAGGAAGAATGGTTGACTTTGCTCAGTCGATGCACTCATTTGTTATTTGGTCAAATTAGATGTACGTAGGTTTTGTTCCTGTATTTTTTTTTTTTTTCAGAAATCTTGTAAATCTTTCTAAATGAAATGAAGTGGCTTGAAGTAGCTAATGTGTAGGTGGAGTAACTCCCCCTCCAAAAACAAAAAAAAAAAGGGGTAGTAATCATGTGTTCACTTTTTCTTCAGGGTTTCTGGACAAAGCAATGTTTCTCGGAGGAGAAACTATTCCTAGATTTTGGTGGTCATTATTTACAGGTATGCTATTTCGTCTCCCTTGGGGCAGGATTAAAGAGAGAAAATACGGAAGAAAAGATAACTTTTACCTGTTTAGAACATTCGCCAACACACCACTGACAATTGATAGTTTGATAAAAATAAGCTATCCGGTCTCCCTCTGCTCAAAATTCTGATACAGTTATTTTCCCCTTGCCTTTCCCTTCCCATTAAAACAGCTGAGATTTATGAAGCCTGAGGCCAGCCTACTGCCTTAACCTGAAGACCAGATGAACCAGGGTTTGACATATTCATGGCCCACCTTGATGCTACCTTTAGATGGACCATGCCTGAAGATCTTGTTGCTCTTAATTTTAACTCATCCACATACCAAGATGACCTTGCATAAGATCTTGAGCTCCTAATAACCTACTAGCCGAAATGCCTTGGTTTTTTGTTGTTTTTCCTTCTCAAAGATTGAACTATGAAACCGTGTTGACTTCCAGATTGGACAGATGTGGAGTTTTCGTTTTGTGTGGTTTACTGCTATAAGATTTGATTAGAACTCATGATGTGCACTCATTATCTCCTCAAAATTCTGTTTTATTTTTTCCTTTTTACCCTTGAGTGCACCCTATTCTGCATCGTCTCCTAAATGTGCTGGGATTAAATGTCGCACTCTGCTCTCTTGCACCCCCAATGGACATTCATTTTTATGGCGCTAAAACATTCCTACTTTAGACTCTAATTTCTGAAAAAGGAAAAGGTTTGGTATCAAGCCTCAGGTTGGAACCTTTAGCGAGCTTAATAAGAAAAACCCTCGATGTTTCGGGTCTTGGCCTTGGGGTGGGTGCGCCGGTGCCTTCGGGTTTGTGAGAGTGGGTCATCGGAAATATTGAGTTATAAAAAAAGAAGATGGTTTGAGAAGTAAGAAAACAAAAGGAAAGGGGTCAGTTTGATTTCTTATTCTTTTTGCTATATTCATTAAACACTGAATCTGGAAATAATATGTGCTTAAAGATGAATGCTGTTTTAGTTTATTATCCAGTAAGTGAAGAGACTATATTAAGGCCAGCCAGTGGCATTCTATACTCGACAGGGCAAGCTTGGTCCGCTATAGTTTGAAAATGCATTGGTTTGTTCATTGTTTATAGTGGTCAGGCAAGTTTTTGTAGAACTCATAATGCCTTGCAGTCTTTTTTGTTTCTTATATTATTTTGGATTTACAGTATTTTATCTTCAAAAGGATTTTTTCTGTCAACATAGCTATGAGGTCAAGCCGAAACATCTGTGCCAGGTTACTGGTACTGTTGGTACCTCAAAAAAGTACACCCTTCCTCTGTGCAAGGATATAACATTTTCTGACCCTAGAGATGGCCTGTGCTCTGAGTCTCTGGTCCTTGCATGGAAACTTGGCAGCTGGAAGTAATATTATTAGCTGTTGCTGAATGCAACTGGAGTTTTATACTCATTTTGACCTTGGAAGGTTTTAGAAAATGAATGTTTTAGGTAAACTGCTCGTACAGATTGTTAGTGTTTGGAACGAAACTGAGTTCTTCGAGCTGTGAAGAGCTGTCTTCAAATCAAATGGTTGCTTCATTTTGGGGCCTCAGGTTAGTTTGGAGCTGATGACAAGAATAGAGCAGGCTTGGACGAGAAGATTGAATTGATAGTTGAGGTAAATGGGGGAATGCTTGTATTTTTCTTTTTAAATTTTATACAACTCTCGTAATGCTATTCTTTAAATCCATTTTAATGTAGAAAATTGTGTGGCAGTTTCTGATGTGTATATGGCCGTGAAATCTATGTTTTTAAAGGGGAAGAAAATAAGTTAGCGGTTGCAGCCTAATAATGTATAAAATAAAAGCCTCTAGAATTCAAAACTTAATCTACCTGTATCAAAGCAAGTGCTCCTACTCCCACTTGGGCATTTCAAAAAGCCCTAGTTGGATAACTTAGTTG

mRNA sequence

GTTGCGAAAGAAAATCAATTCCAAATATTTTCGTGGCAAAGTGCAATTTAGCGAAAGAAAAATCAAAACCCTAGACTCCGTCACAGAAAGTAAGTCCCGAGAATCAACGATCGTTCCTAAAACTCTCGATTGCGCGCAATCGGTCTTCGCCTTCCATTGCCCTCGTTTTTCTTCATTATCTGACAATTTTCAGGTTGATTCATTATCTTTAGCTTGTAAATTTCTTAATTTCTACGTCTTTCCCGTTCCGGATTTTGGATTCTGTTTTCGGTACCGATTGTTTCATTCGTGTTGCTCAATTCTGCGATCCTTTTGCGTTATGGTTGTATTCATTGTCTCGCTGTAATTACGCGGGACTGATGGTGCGGACGAATCGAGATCTAAACTTGCTTTCTTATAGCCTGTTGCAGTTGACAGATATAACCAGTTTTTAAGTTCATGGCTGGTCAGAGGAATAGTTACGCAAAGCGTAATCGTTCTCAGTCTGATTATTCTGAAAATGGAGGGAACAAAAGAAGAAGTCATGGTGAGGACCGGGACCAGTTTATTATAGATCCAGAAGATACTGTTTACCGGTATTTGTGCCCTGTTAAAAAGATTGGAAGTGTTATTGGAAGGGGAGGTGAGATAGTGAAGCAGTTAAGGATAGATACTAAATCAAAGATTAGAATTGGAGAAACAGTGCCTGGATCTGATGAGCGTGTCATAACAATCTACAGCGCAAGCAATGAGGCTAATGCTTTGGAAGAAAGTAGTGATTATAGTTCTCCAGCTCAGCAGGCTTTGTTCAAAGTCCACCATAGAGTTGTGGCCGATGACCTAATGGGCGAGGAATCTGAAGGAGGAAGTCACCAGGTTACAGCTAGACTTCTTGTACCCTCTGATCAAATTGGTTGTATTATTGGGAAAGGTGGGCAGATTGTCCAGAATATTCGCACTGAGACTGGGGCCCTGATTCGCATTCTTAAGGATGATCATTTACCCCGTTGTGCTCTGAGTTCTGATGAACTTGTGCAGATATCTGGTGAACCCCCGATTGTGGAGAAAGCCTTATACCAGATTGCATCTCGACTGCATGAAAATCCTTCACGATCTCAGCATCTACTTGCTTCTGCCATACCTGGTGTATATCCTTCTGGTGGTTCGCTTGTGGCTTCTACACATGGTGCTCCAATTATGGGTTTAGCTCCTTTGGTCAGTCCATATGGAGGTTATAAAGGGGACAGTGGTAATTGGTCCAGGTCTTTATATTCAGCTCCAAGGGAAGAATTATCTTCAAAAGAATTTTCTCTTCGATTGATATGTCCAACCGAAAACATTGGAGGTGTCATTGGCAAAGGTGGAGCTGTAATCAATCAGATTAGACAGGAGACTAAGGCTGCCATAAAAGTTGATAGTTCAGCTACTGAAGAAGATGATTGTTTGATAAATATATCATCAAAGGAGTTCTTTGAAGATTCATATTCTCCCACGCTGGAAGCTGCATTGCGCTTGCAACCAAGGTGCAGTGAGAAAGTAGAAAGAGATTCTGGAATTATTTCATTCACAACCCGTCTGCTTGTGCCTACCTCACGAATTGGTTGCCTAATTGGTAAAGGTGGAGCTATCATTACCGAGTTGAGAAGGCTCACCAAAGCTAATATTCGAATACTGTCAAAGGAAAACCTCCCCAAGGTTGCCTTGGAAGATGATGAAATGGTGCAGATATCCGGGGATCTTGATGTTGCCAAGGAGGCTCTTGTTCATATAGTGACCAGGTTGAGAGCCAACCTTTTTGATAGAGAAGGTGCTCTCTCAGCTGTTCTGCCTGTTCTGCCGTATCTTCCTCTATCAGCTGATGGTTCAGAAAGTCTATATGATGGTAGAGAAGGCAAAAGACATGGGCGTGGGCATTCTTATTCTAGTAGTTATGGGGGTTTCACGGATTTGGCTGCTGGTGATGGTTATGGAAGTTACAGTGGCTCACAGATTGGTGGTGGTGGTAGTGCTTATGGGGCCTATGGAAGCTTTTCCATGGGACGAAGTGGTAGTTCAGGGGTTTCTGGACAAAGCAATGTTTCTCGGAGGAGAAACTATTCCTAGATTTTGGTGGTCATTATTTACAGCTGAGATTTATGAAGCCTGAGGCCAGCCTACTGCCTTAACCTGAAGACCAGATGAACCAGGGTTTGACATATTCATGGCCCACCTTGATGCTACCTTTAGATGGACCATGCCTGAAGATCTTGTTGCTCTTAATTTTAACTCATCCACATACCAAGATGACCTTGCATAAGATCTTGAGCTCCTAATAACCTACTAGCCGAAATGCCTTGGTTTTTTGTTGTTTTTCCTTCTCAAAGATTGAACTATGAAACCGTGTTGACTTCCAGATTGGACAGATGTGGAGTTTTCGTTTTGTGTGGTTTACTGCTATAAGATTTGATTAGAACTCATGATGTGCACTCATTATCTCCTCAAAATTCTGTTTTATTTTTTCCTTTTTACCCTTGAGTGCACCCTATTCTGCATCGTCTCCTAAATGTGCTGGGATTAAATGTCGCACTCTGCTCTCTTGCACCCCCAATGGACATTCATTTTTATGGCGCTAAAACATTCCTACTTTAGACTCTAATTTCTGAAAAAGGAAAAGGTTTGGTATCAAGCCTCAGGTTGGAACCTTTAGCGAGCTTAATAAGAAAAACCCTCGATGTTTCGGGTCTTGGCCTTGGGGTGGGTGCGCCGGTGCCTTCGGGTTTGTGAGAGTGGGTCATCGGAAATATTGAGTTATAAAAAAAGAAGATGGTTTGAGAAGTAAGAAAACAAAAGGAAAGGGGTCAGTTTGATTTCTTATTCTTTTTGCTATATTCATTAAACACTGAATCTGGAAATAATATGTGCTTAAAGATGAATGCTGTTTTAGTTTATTATCCAGTAAGTGAAGAGACTATATTAAGGCCAGCCAGTGGCATTCTATACTCGACAGGGCAAGCTTGGTCCGCTATAGTTTGAAAATGCATTGGTTTGTTCATTGTTTATAGTGGTCAGGCAAGTTTTTGTAGAACTCATAATGCCTTGCAGTCTTTTTTGTTTCTTATATTATTTTGGATTTACAGTATTTTATCTTCAAAAGGATTTTTTCTGTCAACATAGCTATGAGGTCAAGCCGAAACATCTGTGCCAGGTTACTGGTACTGTTGGTACCTCAAAAAAGTACACCCTTCCTCTGTGCAAGGATATAACATTTTCTGACCCTAGAGATGGCCTGTGCTCTGAGTCTCTGGTCCTTGCATGGAAACTTGGCAGCTGGAAGTAATATTATTAGCTGTTGCTGAATGCAACTGGAGTTTTATACTCATTTTGACCTTGGAAGGTTTTAGAAAATGAATGTTTTAGGTAAACTGCTCGTACAGATTGTTAGTGTTTGGAACGAAACTGAGTTCTTCGAGCTGTGAAGAGCTGTCTTCAAATCAAATGGTTGCTTCATTTTGGGGCCTCAGGTTAGTTTGGAGCTGATGACAAGAATAGAGCAGGCTTGGACGAGAAGATTGAATTGATAGTTGAGGTAAATGGGGGAATGCTTGTATTTTTCTTTTTAAATTTTATACAACTCTCGTAATGCTATTCTTTAAATCCATTTTAATGTAGAAAATTGTGTGGCAGTTTCTGATGTGTATATGGCCGTGAAATCTATGTTTTTAAAGGGGAAGAAAATAAGTTAGCGGTTGCAGCCTAATAATGTATAAAATAAAAGCCTCTAGAATTCAAAACTTAATCTACCTGTATCAAAGCAAGTGCTCCTACTCCCACTTGGGCATTTCAAAAAGCCCTAGTTGGATAACTTAGTTG

Coding sequence (CDS)

ATGGCTGGTCAGAGGAATAGTTACGCAAAGCGTAATCGTTCTCAGTCTGATTATTCTGAAAATGGAGGGAACAAAAGAAGAAGTCATGGTGAGGACCGGGACCAGTTTATTATAGATCCAGAAGATACTGTTTACCGGTATTTGTGCCCTGTTAAAAAGATTGGAAGTGTTATTGGAAGGGGAGGTGAGATAGTGAAGCAGTTAAGGATAGATACTAAATCAAAGATTAGAATTGGAGAAACAGTGCCTGGATCTGATGAGCGTGTCATAACAATCTACAGCGCAAGCAATGAGGCTAATGCTTTGGAAGAAAGTAGTGATTATAGTTCTCCAGCTCAGCAGGCTTTGTTCAAAGTCCACCATAGAGTTGTGGCCGATGACCTAATGGGCGAGGAATCTGAAGGAGGAAGTCACCAGGTTACAGCTAGACTTCTTGTACCCTCTGATCAAATTGGTTGTATTATTGGGAAAGGTGGGCAGATTGTCCAGAATATTCGCACTGAGACTGGGGCCCTGATTCGCATTCTTAAGGATGATCATTTACCCCGTTGTGCTCTGAGTTCTGATGAACTTGTGCAGATATCTGGTGAACCCCCGATTGTGGAGAAAGCCTTATACCAGATTGCATCTCGACTGCATGAAAATCCTTCACGATCTCAGCATCTACTTGCTTCTGCCATACCTGGTGTATATCCTTCTGGTGGTTCGCTTGTGGCTTCTACACATGGTGCTCCAATTATGGGTTTAGCTCCTTTGGTCAGTCCATATGGAGGTTATAAAGGGGACAGTGGTAATTGGTCCAGGTCTTTATATTCAGCTCCAAGGGAAGAATTATCTTCAAAAGAATTTTCTCTTCGATTGATATGTCCAACCGAAAACATTGGAGGTGTCATTGGCAAAGGTGGAGCTGTAATCAATCAGATTAGACAGGAGACTAAGGCTGCCATAAAAGTTGATAGTTCAGCTACTGAAGAAGATGATTGTTTGATAAATATATCATCAAAGGAGTTCTTTGAAGATTCATATTCTCCCACGCTGGAAGCTGCATTGCGCTTGCAACCAAGGTGCAGTGAGAAAGTAGAAAGAGATTCTGGAATTATTTCATTCACAACCCGTCTGCTTGTGCCTACCTCACGAATTGGTTGCCTAATTGGTAAAGGTGGAGCTATCATTACCGAGTTGAGAAGGCTCACCAAAGCTAATATTCGAATACTGTCAAAGGAAAACCTCCCCAAGGTTGCCTTGGAAGATGATGAAATGGTGCAGATATCCGGGGATCTTGATGTTGCCAAGGAGGCTCTTGTTCATATAGTGACCAGGTTGAGAGCCAACCTTTTTGATAGAGAAGGTGCTCTCTCAGCTGTTCTGCCTGTTCTGCCGTATCTTCCTCTATCAGCTGATGGTTCAGAAAGTCTATATGATGGTAGAGAAGGCAAAAGACATGGGCGTGGGCATTCTTATTCTAGTAGTTATGGGGGTTTCACGGATTTGGCTGCTGGTGATGGTTATGGAAGTTACAGTGGCTCACAGATTGGTGGTGGTGGTAGTGCTTATGGGGCCTATGGAAGCTTTTCCATGGGACGAAGTGGTAGTTCAGGGGTTTCTGGACAAAGCAATGTTTCTCGGAGGAGAAACTATTCCTAG

Protein sequence

MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVHHRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDHLPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGQSNVSRRRNYS

Homology

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BLAST of CmoCh15G002720 vs. ExPASy Swiss-Prot
Match: Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.4e-53
Identity = 156/460 (33.91%), Postives = 243/460 (52.83%), Query Frame = 0


Query: 12  NRSQSDYSENGGNKR--RSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQLR 71
           NR +      GGN R  +SH E           T YR LC   K G VIG+ G I+K +R
Sbjct: 42  NRYRGGGGGGGGNGRPSKSHPETM-------ATTTYRILCHDAKAGGVIGKSGTIIKSIR 101

Query: 72  IDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVHHRVVADDLM 131
             T + I + E VPG  ER+I I  + N     +      SPAQ+ALF VH R++  +  
Sbjct: 102 QHTGAWINVHELVPGDAERIIEI--SDNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQ 161

Query: 132 ---------GEESEG----GSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRIL 191
                     EE  G    G  +V  RL+V    +GC++GKGG+I++ +R ET   IRIL
Sbjct: 162 FGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRIL 221

Query: 192 -KDDHLPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGG 251
            ++ +LPRC   S+E+VQI GE   V+ AL  ++SRL E    SQH   S   G   S  
Sbjct: 222 PRESNLPRCVSLSEEIVQIVGELNAVKNALAIVSSRLRE----SQHRDRSNFQGRSHSPE 281

Query: 252 SLVASTHGAPIMGLAPLVS---PYGGYKGDSGNWSRSLYS--APR----EELSSKEFSLR 311
              A+     +  L    S   P G ++ ++ +  +S Y+  AP     E + S+E   +
Sbjct: 282 RSFAAAGDDYMPQLRRQSSDRFPRGNFRNNNFSSRQSNYAEEAPAVPVGENVYSEELVFQ 341

Query: 312 LICPTENIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTL 371
           ++CP + I  V+G+   +I+ ++ E    ++V       D+ +I ISS+E  +D + P  
Sbjct: 342 ILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQ 401

Query: 372 EAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILS 431
           EA L +Q +  + +     +I  TTRLLVP+    CL GK G+ ++E+ RLT  +++IL+
Sbjct: 402 EALLHIQTQIIDLIPDKDNLI--TTRLLVPSRDSICLEGKAGS-VSEISRLTGTSVQILA 461

Query: 432 KENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLF 447
           +E +P+ A  +D ++QI+G++  A+EALV +   LR+++F
Sbjct: 462 REEIPRCASINDVVIQITGEIRAAREALVELTLLLRSHMF 485

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BLAST of CmoCh15G002720 vs. ExPASy Swiss-Prot
Match: P58223 (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.1e-48
Identity = 171/566 (30.21%), Postives = 279/566 (49.29%), Query Frame = 0


Query: 10  KRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQLR 69
           KR + Q + SE+  N++R    D+   I   E  VYR LCP+  +G VIG+ G+++  +R
Sbjct: 6   KRKQIQRNNSESNRNQKRRISHDK---INRDELVVYRILCPIDVVGGVIGKSGKVINAIR 65

Query: 70  IDTKSKIRIGETVPGSDERVITIYSA----SNEANALEESSDYSSPAQQALFKVHHRVVA 129
            +TK+KI++ + + G  +RVITIY +      E    +  ++    AQ AL KV+  +VA
Sbjct: 66  HNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVA 125

Query: 130 DDLMGEESEGGSH-----QVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDD- 189
            D   EE+   ++         RLLVP  Q   +IGK G+ ++ IR  T A ++++  D 
Sbjct: 126 SD---EENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDV 185

Query: 190 ----HLPRCALSSDELVQISGEPPIVEKALYQIASRLHE-NP-------SRSQHLLASAI 249
               H+  CA+  D +V ISGEP  V++AL+ +++ +++ NP       S SQ + A+++
Sbjct: 186 SDPSHV--CAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASV 245

Query: 250 -------PGVYPSGGSLVASTH------GAPIMGLAPLVSPYGGYKGDSGN------WSR 309
                    VYP  G      H      G P    A  VS + GY   + N       S 
Sbjct: 246 IVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSL 305

Query: 310 SLYSAPREELSSKEFSLRLICPTENIGGVIGKGGAVINQIRQETKAAIKVDSSATE--ED 369
            +         S+E   +++CP  NI  VIGKGG+ I +IR+ + + I+V+ S T+  +D
Sbjct: 306 PVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDD 365

Query: 370 DCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGK 429
           +C+I +++ E  +D  S  +EA L LQ     +   D    +   +LLV +  IGC+IGK
Sbjct: 366 ECVIIVTATESPDDMKSMAVEAVLLLQ-----EYINDEDAENVKMQLLVSSKVIGCVIGK 425

Query: 430 GGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLF 489
            G++I E+R+ T ANI I   +         D++V++SG++   ++AL+ IV RLR ++ 
Sbjct: 426 SGSVINEIRKRTNANICISKGKK--------DDLVEVSGEVSSVRDALIQIVLRLREDVL 485

Query: 490 DREGALSAVLPVLPYLPLSADGSESLYDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSY 533
             + +++   P     P   D    L           G++  S        +   GYGS+
Sbjct: 486 GDKDSVATRKP-----PARTDNCSFLSGSSNA-----GYTLPSFMSSMASTSGFHGYGSF 535

[Close]

BLAST of CmoCh15G002720 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 3.1e-40
Identity = 168/627 (26.79%), Postives = 256/627 (40.83%), Query Frame = 0


Query: 4   QRNS---YAKRNRSQSDYSENGGNKRR---SHGEDRDQFIIDPEDTVYRYLCPVKKIGSV 63
           +RNS   +A++     D     G+ +R    H +     ++      +R LCP+  +G+V
Sbjct: 2   ERNSVKFHAEKRSGAFDPGSGFGSSKRVKTHHTQLLSALVVPVGHAAFRLLCPLSHVGAV 61

Query: 64  IGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYS-----------ASNEANALEESS 123
           IG+ G ++KQL+  T +KIR+ E   GS +RVITI +           A+N  NA  E  
Sbjct: 62  IGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKLGANNNGNAEGEKK 121

Query: 124 DYS---SPAQQALFKVHHRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQ 183
           +     S AQ AL KV   + A        E  S  V  RLL  S   G +IGKGGQ+V 
Sbjct: 122 EEEVEVSKAQGALIKVFELLAA--------EADSDTVVCRLLTESSHAGAVIGKGGQMVG 181

Query: 184 NIRTETGALIRILKDDHLPRCALSSDELVQISGEPPIVEKALYQIASRLHENPS------ 243
           +IR ETG  I I + ++LP CA + DE+V++ G    V+KAL  I+  L    S      
Sbjct: 182 SIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRM 241

Query: 244 -----------RSQH-----LLASAIP---------------GVYPSG------------ 303
                       S H     ++  ++P                ++P G            
Sbjct: 242 VGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPHD 301

Query: 304 ----GSLVASTHGA---------------------------------------------- 363
                 + A   GA                                              
Sbjct: 302 TLHLRRIEAVPQGALRMHIEADRQDVLRRHVEADRQDALRRRIDVVPQETLYMPSDVLRG 361

Query: 364 -------------------------PIMGLAPLVSPYGGY------------KGDSGNWS 423
                                      MG+     P   Y            +G S ++ 
Sbjct: 362 DCFRQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYL 421

Query: 424 RSLYSA-----------------------PRE-ELSSKEFSLRLICPTENIGGVIGKGGA 447
              YS                        P E E+ +++   +++C TEN GGVIG GG 
Sbjct: 422 AHRYSTLDTHPHSFTTSASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGK 481

[Close]

BLAST of CmoCh15G002720 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 4.4e-26
Identity = 66/176 (37.50%), Postives = 106/176 (60.23%), Query Frame = 0


Query: 40  PEDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEA 99
           P +TV+R L P +K+GS+IGR G+++K++  +T+++I+I +  PG+ ER + +       
Sbjct: 184 PGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMV------- 243

Query: 100 NALEESSDYSSPAQQALFKVHHRVVADDLMGEESEG-GSHQVTARLLVPSDQIGCIIGKG 159
           +  EE      P+   L +VH R+V D L GE S+     +V+ RLLVP+ Q G +IGK 
Sbjct: 244 SGKEEPESSLPPSMDGLLRVHMRIV-DGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQ 303

Query: 160 GQIVQNIRTETGALIRILKDDHLPRCALSSDELVQISGEPPIVEKALYQIASRLHE 215
           G  V+ I+  +  ++R+L  + LP  AL  D +V++ GEP  V +AL  IAS L +
Sbjct: 304 GGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRK 351

[Close]

BLAST of CmoCh15G002720 vs. ExPASy Swiss-Prot
Match: P57724 (Poly(rC)-binding protein 4 OS=Mus musculus OX=10090 GN=Pcbp4 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-17
Identity = 88/291 (30.24%), Postives = 139/291 (47.77%), Query Frame = 0


Query: 46  RYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEES 105
           R L   K++GS+IG+ GE VK++R  + ++I I E   GS    IT  + S  A      
Sbjct: 21  RMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAA------ 80

Query: 106 SDYSSPAQQALFKVHHRVVADDLMGEESEGGS---HQVTARLLVPSDQIGCIIGKGGQIV 165
                      FK+      +DL    + GGS     VT RL++P+ Q G +IGK G  +
Sbjct: 81  --VFHAVSMIAFKLD-----EDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKI 140

Query: 166 QNIRTETGALIRILKDDHLPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHL 225
           + IR  TGA +++   D LP    S++  V +SG P  +   + QI + + E+P +    
Sbjct: 141 KEIRETTGAQVQV-AGDLLPN---STERAVTVSGVPDAIILCVRQICAVILESPPK---- 200

Query: 226 LASAIPGVYPS---GGSLVASTHGAPIMGLAPLVSP--------YGGYKGDSGNWSRSLY 285
             + IP  +PS   G  L+++  G  + G    V+P          G+     + S    
Sbjct: 201 -GATIP-YHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPG 260

Query: 286 SAPREELSSKEFSLRLICPTENIGGVIGKGGAVINQIRQETKAAIKVDSSA 323
             P  + SS+EF    + P + IG VIG+ G+ I++IRQ + A IK+ + A
Sbjct: 261 MDPSTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQA 281

[Close]

BLAST of CmoCh15G002720 vs. ExPASy TrEMBL
Match: A0A6J1FJS6 (KH domain-containing protein HEN4-like OS=Cucurbita moschata OX=3662 GN=LOC111444879 PE=4 SV=1)

HSP 1 Score: 1051.2 bits (2717), Expect = 1.5e-303
Identity = 547/547 (100.00%), Postives = 547/547 (100.00%), Query Frame = 0


Query: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS 240
           LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS
Sbjct: 181 LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS 240

Query: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK 300
           THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK
Sbjct: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK 300

Query: 301 GGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360
           GGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV
Sbjct: 301 GGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360

Query: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420
           ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM
Sbjct: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420

Query: 421 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKR 480
           VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKR
Sbjct: 421 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKR 480

Query: 481 HGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGQSNV 540
           HGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGQSNV
Sbjct: 481 HGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGQSNV 540

Query: 541 SRRRNYS 548
           SRRRNYS
Sbjct: 541 SRRRNYS 547

[Close]

BLAST of CmoCh15G002720 vs. ExPASy TrEMBL
Match: A0A6J1JYX2 (KH domain-containing protein HEN4-like OS=Cucurbita maxima OX=3661 GN=LOC111489532 PE=4 SV=1)

HSP 1 Score: 1024.2 bits (2647), Expect = 2.0e-295
Identity = 534/545 (97.98%), Postives = 536/545 (98.35%), Query Frame = 0


Query: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSY KRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNE NALEESSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNALEESSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLM EESEG SHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMDEESEGVSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS 240
           LPRCALSSDELVQISGEPPIVEKALYQIASRL ENPSRSQHLLASAIPGVYPSGGSLVAS
Sbjct: 181 LPRCALSSDELVQISGEPPIVEKALYQIASRLQENPSRSQHLLASAIPGVYPSGGSLVAS 240

Query: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK 300
           THGAPIMGLA LVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK
Sbjct: 241 THGAPIMGLASLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK 300

Query: 301 GGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360
           GGAVINQIRQETKAAIKVDSSATEEDDCLINI+SKEFFEDSYSPTLEAALRLQPRCSEKV
Sbjct: 301 GGAVINQIRQETKAAIKVDSSATEEDDCLINITSKEFFEDSYSPTLEAALRLQPRCSEKV 360

Query: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420
           ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM
Sbjct: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420

Query: 421 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKR 480
           VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPL ADGSESLYDGREGKR
Sbjct: 421 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLPADGSESLYDGREGKR 480

Query: 481 HGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGQSNV 540
           HGRGHSYS+SYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSG  NV
Sbjct: 481 HGRGHSYSNSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGHGNV 540

Query: 541 SRRRN 546
           SRRRN
Sbjct: 541 SRRRN 545

[Close]

BLAST of CmoCh15G002720 vs. ExPASy TrEMBL
Match: A0A1S3C9E7 (KH domain-containing protein At4g18375 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498494 PE=4 SV=1)

HSP 1 Score: 982.6 bits (2539), Expect = 6.5e-283
Identity = 512/556 (92.09%), Postives = 529/556 (95.14%), Query Frame = 0


Query: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSY KRN SQSDYSENGGNKRRSHGEDRDQF+ID EDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120
           GGEIVKQLR+DTKSKIRIGETVPGSDERVITIYSASNE N+LEESSDY SPAQ+ALFK+H
Sbjct: 61  GGEIVKQLRVDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RVVADD M E+SEGG HQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGA +RILKDDH
Sbjct: 121 DRVVADDFMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 180

Query: 181 LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS 240
           LPRCALSSDELVQISGEP IV+KALYQIASRLH+NPSRSQHLLASAIPGVY SGGSL+AS
Sbjct: 181 LPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAS 240

Query: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK 300
           THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPRE+LSSKEFSLRLICPTENIGGVIGK
Sbjct: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREDLSSKEFSLRLICPTENIGGVIGK 300

Query: 301 GGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360
           GGA+INQIRQETKAAIKVDSSATE DDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV
Sbjct: 301 GGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360

Query: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420
           ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM
Sbjct: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420

Query: 421 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL-YDGREGK 480
           VQISGDLDVAKEAL+HIVTRLRANLFDREGALSAVLPVLPYLPLSADGS+SL YDGREGK
Sbjct: 421 VQISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGK 480

Query: 481 RHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQI--------GGGGSAYGAYGSFSMGRSGS 540
           RHGRGHSYSS YGGF DLA GDGYGSYSGSQI        GGGGSAYGAYG+FS+GRSGS
Sbjct: 481 RHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQIGSGGSGGGGGGGSAYGAYGNFSVGRSGS 540

Query: 541 SGVSGQSNVSRRRNYS 548
           SGVSG  +VSRRRNYS
Sbjct: 541 SGVSGHGSVSRRRNYS 556

[Close]

BLAST of CmoCh15G002720 vs. ExPASy TrEMBL
Match: A0A0A0KVM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636640 PE=4 SV=1)

HSP 1 Score: 980.7 bits (2534), Expect = 2.5e-282
Identity = 513/557 (92.10%), Postives = 528/557 (94.79%), Query Frame = 0


Query: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSY KRN SQSDYSENGGNKRRSHGEDRDQF+ID EDTVYRYLCPVKKIGSVIGR
Sbjct: 61  MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 120

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNE N+LEESSDY SPAQ+ALFK+H
Sbjct: 121 GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 180

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RVVADD M E+SEGG HQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGA +RILKDDH
Sbjct: 181 DRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 240

Query: 181 LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS 240
           LPRCALSSDELVQISGEP IV+KALYQIASRLH+NPSRSQHLLASAIPGVY SGGSL+A 
Sbjct: 241 LPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAP 300

Query: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK 300
           THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPRE+LSSKEFSLRLICPTENIGGVIGK
Sbjct: 301 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREDLSSKEFSLRLICPTENIGGVIGK 360

Query: 301 GGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360
           GGA+INQIRQETKAAIKVDSSATE DDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV
Sbjct: 361 GGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 420

Query: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420
           ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM
Sbjct: 421 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 480

Query: 421 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL-YDGREGK 480
           VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGS+SL YDGREGK
Sbjct: 481 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGK 540

Query: 481 RHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGS---------AYGAYGSFSMGRSG 540
           RHGRGHSYSS YGGF DLA GDGYGSYSGSQIGGGGS         AYGAYG+FS+GRSG
Sbjct: 541 RHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQIGGGGSGGGGGGGGGAYGAYGNFSVGRSG 600

Query: 541 SSGVSGQSNVSRRRNYS 548
           SSGVSG  +VSRRRNYS
Sbjct: 601 SSGVSGHGSVSRRRNYS 617

[Close]

BLAST of CmoCh15G002720 vs. ExPASy TrEMBL
Match: A0A1S3CA00 (KH domain-containing protein At4g18375 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498494 PE=4 SV=1)

HSP 1 Score: 979.9 bits (2532), Expect = 4.2e-282
Identity = 511/556 (91.91%), Postives = 528/556 (94.96%), Query Frame = 0


Query: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSY KRN SQSDYSENGGNKRRSHGEDRDQF+ID EDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120
           GGEIVKQLR+DTKSKIRIGETVPGSDERVITIYSASNE N+LEESSDY SPAQ+ALFK+H
Sbjct: 61  GGEIVKQLRVDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RVVADD M E+SEGG HQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGA +RILKDDH
Sbjct: 121 DRVVADDFMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 180

Query: 181 LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS 240
           LPRCALSSDELVQISGEP IV+KALYQIASRLH+NPSRSQHLLASAIPGVY SGGSL+AS
Sbjct: 181 LPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAS 240

Query: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK 300
           THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPRE+LSSKEFSLRLICPTENIGGVIGK
Sbjct: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREDLSSKEFSLRLICPTENIGGVIGK 300

Query: 301 GGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360
           GGA+INQIRQETKAAIKVDSSATE DDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV
Sbjct: 301 GGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360

Query: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420
           ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKEN PKVALEDDEM
Sbjct: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENPPKVALEDDEM 420

Query: 421 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL-YDGREGK 480
           VQISGDLDVAKEAL+HIVTRLRANLFDREGALSAVLPVLPYLPLSADGS+SL YDGREGK
Sbjct: 421 VQISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGK 480

Query: 481 RHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQI--------GGGGSAYGAYGSFSMGRSGS 540
           RHGRGHSYSS YGGF DLA GDGYGSYSGSQI        GGGGSAYGAYG+FS+GRSGS
Sbjct: 481 RHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQIGSGGSGGGGGGGSAYGAYGNFSVGRSGS 540

Query: 541 SGVSGQSNVSRRRNYS 548
           SGVSG  +VSRRRNYS
Sbjct: 541 SGVSGHGSVSRRRNYS 556

[Close]

BLAST of CmoCh15G002720 vs. NCBI nr
Match: XP_022938745.1 (KH domain-containing protein HEN4-like [Cucurbita moschata] >XP_022938747.1 KH domain-containing protein HEN4-like [Cucurbita moschata] >XP_022938748.1 KH domain-containing protein HEN4-like [Cucurbita moschata])

HSP 1 Score: 1051.2 bits (2717), Expect = 3.1e-303
Identity = 547/547 (100.00%), Postives = 547/547 (100.00%), Query Frame = 0


Query: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS 240
           LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS
Sbjct: 181 LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS 240

Query: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK 300
           THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK
Sbjct: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK 300

Query: 301 GGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360
           GGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV
Sbjct: 301 GGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360

Query: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420
           ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM
Sbjct: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420

Query: 421 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKR 480
           VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKR
Sbjct: 421 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKR 480

Query: 481 HGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGQSNV 540
           HGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGQSNV
Sbjct: 481 HGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGQSNV 540

Query: 541 SRRRNYS 548
           SRRRNYS
Sbjct: 541 SRRRNYS 547

[Close]

BLAST of CmoCh15G002720 vs. NCBI nr
Match: KAG7016130.1 (KH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1038.5 bits (2684), Expect = 2.1e-299
Identity = 543/555 (97.84%), Postives = 545/555 (98.20%), Query Frame = 0


Query: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSY KRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALE+SSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELV--------QISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP
Sbjct: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE
Sbjct: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL
Sbjct: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480

Query: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS 540
           YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS
Sbjct: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS 540

Query: 541 GVSGQSNVSRRRNYS 548
           GVSGQ NVSRRRNYS
Sbjct: 541 GVSGQGNVSRRRNYS 555

[Close]

BLAST of CmoCh15G002720 vs. NCBI nr
Match: XP_023550244.1 (KH domain-containing protein HEN4-like [Cucurbita pepo subsp. pepo] >XP_023550245.1 KH domain-containing protein HEN4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1036.6 bits (2679), Expect = 7.8e-299
Identity = 542/547 (99.09%), Postives = 542/547 (99.09%), Query Frame = 0


Query: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSY KRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLMGEESE GSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMGEESEVGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS 240
           LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS
Sbjct: 181 LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS 240

Query: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK 300
           THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK
Sbjct: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK 300

Query: 301 GGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360
           GGAVINQIRQETKAAIKVDSSAT EDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV
Sbjct: 301 GGAVINQIRQETKAAIKVDSSAT-EDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360

Query: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420
           ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM
Sbjct: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420

Query: 421 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKR 480
           VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKR
Sbjct: 421 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKR 480

Query: 481 HGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGQSNV 540
           HGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSG  NV
Sbjct: 481 HGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGHGNV 540

Query: 541 SRRRNYS 548
           SRRRNYS
Sbjct: 541 SRRRNYS 546

[Close]

BLAST of CmoCh15G002720 vs. NCBI nr
Match: XP_022993579.1 (KH domain-containing protein HEN4-like [Cucurbita maxima] >XP_022993580.1 KH domain-containing protein HEN4-like [Cucurbita maxima] >XP_022993581.1 KH domain-containing protein HEN4-like [Cucurbita maxima])

HSP 1 Score: 1024.2 bits (2647), Expect = 4.0e-295
Identity = 534/545 (97.98%), Postives = 536/545 (98.35%), Query Frame = 0


Query: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSY KRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNE NALEESSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNALEESSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLM EESEG SHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMDEESEGVSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS 240
           LPRCALSSDELVQISGEPPIVEKALYQIASRL ENPSRSQHLLASAIPGVYPSGGSLVAS
Sbjct: 181 LPRCALSSDELVQISGEPPIVEKALYQIASRLQENPSRSQHLLASAIPGVYPSGGSLVAS 240

Query: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK 300
           THGAPIMGLA LVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK
Sbjct: 241 THGAPIMGLASLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK 300

Query: 301 GGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360
           GGAVINQIRQETKAAIKVDSSATEEDDCLINI+SKEFFEDSYSPTLEAALRLQPRCSEKV
Sbjct: 301 GGAVINQIRQETKAAIKVDSSATEEDDCLINITSKEFFEDSYSPTLEAALRLQPRCSEKV 360

Query: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420
           ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM
Sbjct: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420

Query: 421 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKR 480
           VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPL ADGSESLYDGREGKR
Sbjct: 421 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLPADGSESLYDGREGKR 480

Query: 481 HGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGQSNV 540
           HGRGHSYS+SYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSG  NV
Sbjct: 481 HGRGHSYSNSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGHGNV 540

Query: 541 SRRRN 546
           SRRRN
Sbjct: 541 SRRRN 545

[Close]

BLAST of CmoCh15G002720 vs. NCBI nr
Match: XP_038889775.1 (KH domain-containing protein HEN4 [Benincasa hispida])

HSP 1 Score: 982.6 bits (2539), Expect = 1.3e-282
Identity = 512/551 (92.92%), Postives = 529/551 (96.01%), Query Frame = 0


Query: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSY KRN SQSDYSENGGNKRRSHGEDRDQF+ID EDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYS SNE N+LEESSDY SPAQ+ALFK+H
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSVSNEINSLEESSDYVSPAQEALFKIH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RVVADDLM E+SEGG HQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGA +RILKDDH
Sbjct: 121 DRVVADDLMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 180

Query: 181 LPRCALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS 240
           LPRCALSSDELVQISGEP IV+KALYQIASRLH+NPSRSQHLLASAIPGVY SGGSL+A 
Sbjct: 181 LPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAP 240

Query: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGK 300
           THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPRE+LSSKEFSLRLICPTENIGGVIGK
Sbjct: 241 THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREDLSSKEFSLRLICPTENIGGVIGK 300

Query: 301 GGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360
           GGA+INQIRQETKAAIKVDSSATE DDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV
Sbjct: 301 GGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKV 360

Query: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420
           ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM
Sbjct: 361 ERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEM 420

Query: 421 VQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL-YDGREGK 480
           VQISGD+DVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGS+SL YDGREGK
Sbjct: 421 VQISGDIDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGK 480

Query: 481 RHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQI---GGGGSAYGAYGSFSMGRSGSSGVSG 540
           RHGRGHSYSS YGGF+DLA GDGYGSYSGSQI   GGGGSAYG+YGSFS+GRSGSSGVSG
Sbjct: 481 RHGRGHSYSSGYGGFSDLAGGDGYGSYSGSQIGGGGGGGSAYGSYGSFSVGRSGSSGVSG 540

Query: 541 QSNVSRRRNYS 548
             +VSRRRNYS
Sbjct: 541 HGSVSRRRNYS 551

[Close]

BLAST of CmoCh15G002720 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 667.9 bits (1722), Expect = 6.8e-192
Identity = 352/544 (64.71%), Postives = 436/544 (80.15%), Query Frame = 0


Query: 5   RNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEI 64
           R+S+ KR+R QSDY +NGG+KRR  G+DRD  +ID +DTV+RYLCPVKKIGSVIGRGG+I
Sbjct: 12  RDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDI 71

Query: 65  VKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVHHRVV 124
           VKQLR DT+SKIRIGE +PG DERVITIYS S+E NA  +     SPAQ ALF++H RVV
Sbjct: 72  VKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRVV 131

Query: 125 ADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDHLPRC 184
           ADD   E+S  G  QVTA+LLVPSDQIGCI+G+GGQIVQNIR+ETGA IRI+KD ++P C
Sbjct: 132 ADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLC 191

Query: 185 ALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVASTHGA 244
           AL+SDEL+QISGE  IV+KAL QIASRLHENPSRSQ+LL+S+  G YP+ GSL++   G 
Sbjct: 192 ALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSS--GGYPA-GSLMSHAGGP 251

Query: 245 PIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGKGGAV 304
            ++GLAPL+  YG    D+G+WSR LY  PR +  + EF +RL+ P ENI  VIGKGGA+
Sbjct: 252 RLVGLAPLMGSYG---RDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGAL 311

Query: 305 INQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDS 364
           INQ+RQET+A IKVDSS TE +DCLI IS++E FED+YSPT+EA +RLQP+CS+KVERDS
Sbjct: 312 INQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDS 371

Query: 365 GIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQIS 424
           G++SFTTRLLVP+SRIGC++GKGGAIITE+RR+TKANIRIL KENLPKVA +DDEMVQIS
Sbjct: 372 GLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQIS 431

Query: 425 GDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL-YDGREGKRHGR 484
           G+LDVAKEAL+ I +RLRAN+FDREGA+SA++PVLPY+P++ D  +   YD R+ +R  R
Sbjct: 432 GELDVAKEALIQITSRLRANVFDREGAVSALMPVLPYVPVAPDAGDRFDYDSRDSRRLER 491

Query: 485 GHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSA-YGAYGSFSMGRSGSSGVSGQSNVSR 544
           G+ Y   YG  +   + +GY  Y G+ +GG  S  YG YG ++ GRS SSG+S  S+  R
Sbjct: 492 GNPYPGGYG--SSGVSAEGYSPY-GAPVGGSSSTPYGVYGGYASGRSSSSGLSSHSSTYR 546

Query: 545 RRNY 547
           RRNY
Sbjct: 552 RRNY 546

[Close]

BLAST of CmoCh15G002720 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 667.9 bits (1722), Expect = 6.8e-192
Identity = 352/544 (64.71%), Postives = 436/544 (80.15%), Query Frame = 0


Query: 5   RNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEI 64
           R+S+ KR+R QSDY +NGG+KRR  G+DRD  +ID +DTV+RYLCPVKKIGSVIGRGG+I
Sbjct: 12  RDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDI 71

Query: 65  VKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVHHRVV 124
           VKQLR DT+SKIRIGE +PG DERVITIYS S+E NA  +     SPAQ ALF++H RVV
Sbjct: 72  VKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRVV 131

Query: 125 ADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDHLPRC 184
           ADD   E+S  G  QVTA+LLVPSDQIGCI+G+GGQIVQNIR+ETGA IRI+KD ++P C
Sbjct: 132 ADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLC 191

Query: 185 ALSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVASTHGA 244
           AL+SDEL+QISGE  IV+KAL QIASRLHENPSRSQ+LL+S+  G YP+ GSL++   G 
Sbjct: 192 ALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSS--GGYPA-GSLMSHAGGP 251

Query: 245 PIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGKGGAV 304
            ++GLAPL+  YG    D+G+WSR LY  PR +  + EF +RL+ P ENI  VIGKGGA+
Sbjct: 252 RLVGLAPLMGSYG---RDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGAL 311

Query: 305 INQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDS 364
           INQ+RQET+A IKVDSS TE +DCLI IS++E FED+YSPT+EA +RLQP+CS+KVERDS
Sbjct: 312 INQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDS 371

Query: 365 GIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQIS 424
           G++SFTTRLLVP+SRIGC++GKGGAIITE+RR+TKANIRIL KENLPKVA +DDEMVQIS
Sbjct: 372 GLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQIS 431

Query: 425 GDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL-YDGREGKRHGR 484
           G+LDVAKEAL+ I +RLRAN+FDREGA+SA++PVLPY+P++ D  +   YD R+ +R  R
Sbjct: 432 GELDVAKEALIQITSRLRANVFDREGAVSALMPVLPYVPVAPDAGDRFDYDSRDSRRLER 491

Query: 485 GHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSA-YGAYGSFSMGRSGSSGVSGQSNVSR 544
           G+ Y   YG  +   + +GY  Y G+ +GG  S  YG YG ++ GRS SSG+S  S+  R
Sbjct: 492 GNPYPGGYG--SSGVSAEGYSPY-GAPVGGSSSTPYGVYGGYASGRSSSSGLSSHSSTYR 546

Query: 545 RRNY 547
           RRNY
Sbjct: 552 RRNY 546

[Close]

BLAST of CmoCh15G002720 vs. TAIR 10
Match: AT1G14170.3 (RNA-binding KH domain-containing protein )

HSP 1 Score: 456.1 bits (1172), Expect = 4.1e-128
Identity = 249/481 (51.77%), Postives = 334/481 (69.44%), Query Frame = 0


Query: 5   RNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEI 64
           RN + KR+  QS+++ NGG+KRR+  ++ DQ +I  EDTVYRYLCPVKK GS+IG+GGEI
Sbjct: 6   RNIHGKRSNLQSEFTGNGGSKRRNLHDETDQNVIASEDTVYRYLCPVKKTGSIIGKGGEI 65

Query: 65  VKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVHHRVV 124
            KQ+R +TKS +RI E +PG +ERV+T+YS + E N   +  +   PA  ALFKVH  VV
Sbjct: 66  AKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDDGELVCPALDALFKVHDMVV 125

Query: 125 A----DDLMGEESEGGSHQ-VTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDD 184
           A    DD   ++++ G  Q VT R+LVPSDQIGC+IGKGGQ++QN+R +T A IR++K D
Sbjct: 126 ADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIK-D 185

Query: 185 HLPRCA--LSSDELVQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSL 244
           HLP CA  LS DEL+ I GEP +V +ALYQ+AS LH+NPSR QHLL S+        G++
Sbjct: 186 HLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPSRFQHLLLSSSSSSMHQPGAM 245

Query: 245 VASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGV 304
           + S         A L S            S   Y+  R+   ++EF +  ICP EN+GGV
Sbjct: 246 LMS---------AALTS------------SHRNYAVRRDIADAREFCVCFICPAENVGGV 305

Query: 305 IGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCS 364
           IGKGG  INQIRQET A I+V++S T++DDC+I ISSKEF+ED  SP + AA+RLQ RCS
Sbjct: 306 IGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQRCS 365

Query: 365 EKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALED 424
           EKV +D+  ++ +TRLLV +S+IGCLIGKGGA+I+E+R +T+ANIRIL KE++PK+A ED
Sbjct: 366 EKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIARED 425

Query: 425 DEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLP-LSADGSESLYDGR 478
           +EMVQI+G  D A +AL  ++ RLRAN FD +  L  +    PY+P ++   S+S Y  R
Sbjct: 426 EEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLLPTSFPYIPQVTESSSKSKYAKR 463

[Close]

BLAST of CmoCh15G002720 vs. TAIR 10
Match: AT1G14170.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 436.8 bits (1122), Expect = 2.6e-122
Identity = 237/452 (52.43%), Postives = 313/452 (69.25%), Query Frame = 0


Query: 34  DQFIIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIY 93
           DQ +I  EDTVYRYLCPVKK GS+IG+GGEI KQ+R +TKS +RI E +PG +ERV+T+Y
Sbjct: 10  DQNVIASEDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMY 69

Query: 94  SASNEANALEESSDYSSPAQQALFKVHHRVVA----DDLMGEESEGGSHQ-VTARLLVPS 153
           S + E N   +  +   PA  ALFKVH  VVA    DD   ++++ G  Q VT R+LVPS
Sbjct: 70  STNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPS 129

Query: 154 DQIGCIIGKGGQIVQNIRTETGALIRILKDDHLPRCA--LSSDELVQISGEPPIVEKALY 213
           DQIGC+IGKGGQ++QN+R +T A IR++K DHLP CA  LS DEL+ I GEP +V +ALY
Sbjct: 130 DQIGCVIGKGGQVIQNLRNDTNAQIRVIK-DHLPACALTLSHDELLLIIGEPLVVREALY 189

Query: 214 QIASRLHENPSRSQHLLASAIPGVYPSGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNW 273
           Q+AS LH+NPSR QHLL S+        G+++ S         A L S            
Sbjct: 190 QVASLLHDNPSRFQHLLLSSSSSSMHQPGAMLMS---------AALTS------------ 249

Query: 274 SRSLYSAPREELSSKEFSLRLICPTENIGGVIGKGGAVINQIRQETKAAIKVDSSATEED 333
           S   Y+  R+   ++EF +  ICP EN+GGVIGKGG  INQIRQET A I+V++S T++D
Sbjct: 250 SHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDD 309

Query: 334 DCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGK 393
           DC+I ISSKEF+ED  SP + AA+RLQ RCSEKV +D+  ++ +TRLLV +S+IGCLIGK
Sbjct: 310 DCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGK 369

Query: 394 GGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLF 453
           GGA+I+E+R +T+ANIRIL KE++PK+A ED+EMVQI+G  D A +AL  ++ RLRAN F
Sbjct: 370 GGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSF 429

Query: 454 DREGALSAVLPVLPYLP-LSADGSESLYDGRE 478
           D +  L  +    PY+P ++   S+S Y  R+
Sbjct: 430 DMDHGLVLLPTSFPYIPQVTESSSKSKYAKRD 438

[Close]

BLAST of CmoCh15G002720 vs. TAIR 10
Match: AT1G14170.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 430.3 bits (1105), Expect = 2.4e-120
Identity = 233/444 (52.48%), Postives = 308/444 (69.37%), Query Frame = 0


Query: 42  DTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANA 101
           DTVYRYLCPVKK GS+IG+GGEI KQ+R +TKS +RI E +PG +ERV+T+YS + E N 
Sbjct: 10  DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNH 69

Query: 102 LEESSDYSSPAQQALFKVHHRVVA----DDLMGEESEGGSHQ-VTARLLVPSDQIGCIIG 161
             +  +   PA  ALFKVH  VVA    DD   ++++ G  Q VT R+LVPSDQIGC+IG
Sbjct: 70  FGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIG 129

Query: 162 KGGQIVQNIRTETGALIRILKDDHLPRCA--LSSDELVQISGEPPIVEKALYQIASRLHE 221
           KGGQ++QN+R +T A IR++K DHLP CA  LS DEL+ I GEP +V +ALYQ+AS LH+
Sbjct: 130 KGGQVIQNLRNDTNAQIRVIK-DHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHD 189

Query: 222 NPSRSQHLLASAIPGVYPSGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAP 281
           NPSR QHLL S+        G+++ S         A L S            S   Y+  
Sbjct: 190 NPSRFQHLLLSSSSSSMHQPGAMLMS---------AALTS------------SHRNYAVR 249

Query: 282 REELSSKEFSLRLICPTENIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISS 341
           R+   ++EF +  ICP EN+GGVIGKGG  INQIRQET A I+V++S T++DDC+I ISS
Sbjct: 250 RDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISS 309

Query: 342 KEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITEL 401
           KEF+ED  SP + AA+RLQ RCSEKV +D+  ++ +TRLLV +S+IGCLIGKGGA+I+E+
Sbjct: 310 KEFYEDQ-SPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEM 369

Query: 402 RRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSA 461
           R +T+ANIRIL KE++PK+A ED+EMVQI+G  D A +AL  ++ RLRAN FD +  L  
Sbjct: 370 RSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVL 429

Query: 462 VLPVLPYLP-LSADGSESLYDGRE 478
           +    PY+P ++   S+S Y  R+
Sbjct: 430 LPTSFPYIPQVTESSSKSKYAKRD 430

The following BLAST results are available for this feature:

BLAST of CmoCh15G002720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W4B1	1.4e-53	33.91	RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P58223	4.1e-48	30.21	KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18...	[more]
F4KDN0	3.1e-40	26.79	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
Q9SR13	4.4e-26	37.50	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
P57724	1.3e-17	30.24	Poly(rC)-binding protein 4 OS=Mus musculus OX=10090 GN=Pcbp4 PE=1 SV=1	[more]

BLAST of CmoCh15G002720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJS6	1.5e-303	100.00	KH domain-containing protein HEN4-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JYX2	2.0e-295	97.98	KH domain-containing protein HEN4-like OS=Cucurbita maxima OX=3661 GN=LOC1114895...	[more]
A0A1S3C9E7	6.5e-283	92.09	KH domain-containing protein At4g18375 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0KVM1	2.5e-282	92.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636640 PE=4 SV=1	[more]
A0A1S3CA00	4.2e-282	91.91	KH domain-containing protein At4g18375 isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of CmoCh15G002720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938745.1	3.1e-303	100.00	KH domain-containing protein HEN4-like [Cucurbita moschata] >XP_022938747.1 KH d...	[more]
KAG7016130.1	2.1e-299	97.84	KH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023550244.1	7.8e-299	99.09	KH domain-containing protein HEN4-like [Cucurbita pepo subsp. pepo] >XP_02355024...	[more]
XP_022993579.1	4.0e-295	97.98	KH domain-containing protein HEN4-like [Cucurbita maxima] >XP_022993580.1 KH dom...	[more]
XP_038889775.1	1.3e-282	92.92	KH domain-containing protein HEN4 [Benincasa hispida]	[more]

BLAST of CmoCh15G002720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15270.2	6.8e-192	64.71	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	6.8e-192	64.71	RNA-binding KH domain-containing protein	[more]
AT1G14170.3	4.1e-128	51.77	RNA-binding KH domain-containing protein	[more]
AT1G14170.1	2.6e-122	52.43	RNA-binding KH domain-containing protein	[more]
AT1G14170.2	2.4e-120	52.48	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 41..113 e-value: 4.6E-6 score: 36.2 coord: 367..442 e-value: 9.4E-12 score: 55.0 coord: 281..354 e-value: 1.6E-4 score: 31.1 coord: 138..213 e-value: 2.2E-13 score: 60.5
None	No IPR available	GENE3D	3.30.310.210		coord: 282..444 e-value: 6.4E-32 score: 112.5 coord: 41..220 e-value: 1.2E-35 score: 124.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 528..547
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 9..482
None	No IPR available	PANTHER	PTHR10288:SF274	PROTEIN BTR1-LIKE	coord: 9..482
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 368..437 score: 15.933702
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 282..353 score: 13.292338
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 139..208 score: 18.658918
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 42..109 score: 12.64248
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 370..438 e-value: 2.82883E-18 score: 77.1315
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 44..104 e-value: 2.44171E-16 score: 71.3535
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 284..335 e-value: 4.06511E-13 score: 62.4939
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 141..209 e-value: 2.77013E-20 score: 82.5243
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 370..437 e-value: 7.4E-14 score: 51.3 coord: 45..98 e-value: 8.2E-10 score: 38.4 coord: 285..334 e-value: 1.1E-10 score: 41.2 coord: 141..209 e-value: 8.4E-16 score: 57.6
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 38..97
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 368..442
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 135..216
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 278..334

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G002720.1	CmoCh15G002720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding