CmoCh14G014100 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G014100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	DCC family protein At1g52590, chloroplastic
Location	Cmo_Chr14: 11542885 .. 11545025 (-)
RNA-Seq Expression	CmoCh14G014100
Synteny	CmoCh14G014100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGGAAAAGCCAGTCGTGCATTTCCACCGACTCCAATGGCGCTTCCAATATCTGGCAGAGTTCCGGCACGTTTTGTCCTGCCGTCAACGGCGCACGTTAGACCACGACAGCCAGTGGCTTTCGTCTCTTTATCTTCTGCAACCAATGACGGAACGATCGATTGGGTCGAAGCAACTTCTGACTTCTTCGAGAAAGATACAAGACCAATAATGCTATTTGACGGTACGATATTCTTTTAGTGTATCGATTGCTACTATTTTTGAATTCGTTAACCTCTAATTCTTCTCTATGTCATGAAATTTTTGGTTTATTGATATAATTGAATGAAAGTGAAGTAGTTGTGTAGGGTTTTTATGTGTTTTTTGAATTCGCGGTGAAAGTGAAGTATCGATGATTTTATTAATCTCGCAGGTGTGTGCAATTTGTGCAATGGAGGTGTGAGATTTGTTCGTGCTAATGATCGAAACAGGTGTGTCTTCCTTTTCTTTTCATTTTTGATTTCTAAGGAAATTCTTGGAAAGATAATGAAATTGGAAGCTGATTTAGAGGCCCCGTATAGCTCCCCTGTAATATGGGGAAATTGAATGCCGTTGTATCTTCAAGATCAATGGTTTATATGATTTCATACCTTCATAATATTGTTGCCATGATTGAGTTGCAGCCTAAATAGATTTACGATTATGTGTTTATGTAAATGGGCGATCATTGTTCTTGAGGAGAGGTTAAAATTATTTATAGCTGTTACCTTGAAACCCTATGCTCCCTGTCTTTGTGGATTTACCATTCACATTAACAGAAGAATACGATTAGAGGCTCTCCAAAGTGAAGCTGGGAAGAAGCTGTTAAGAAGATCAGGAAGAGCACCGGATGATATTTCGAGTGTTGTTCTTGTTGAAAAGGACAGGTATATGCTTGCATCTCGTCATTTGAAGGTTATAATTGTTGATGAAAATGTATTATTATAACTCTCATTTAGTTCATAACCCTTAATGATTAATCCTTAATGATTCATAATCTCATTTATCTTAGTTCATAACCCTTAATGATTAATCCTTAATGATTTATAATCTCATTTATCTTGGTTCATAACTTTCATTTAGTTCATAATCCTTTTGGTTCATATTCTCATTTTGATACACGAATCATCTATGCCTATATAAAGGGTTGTCTAGGATGGTTGAGATGTATTGAGTTTGATTGAGTTTGAGTGTCATTTTGTATTTGTTGGGTGATATTTAGGAGGAAATTTCTTGAGAGACATTGTAGTGTGAGAATGTGAGATATATACTCTGTAAACATTTTGATTATTGAGATTGGTTGCTACCCGTCGATGTAGGGGAGTTTCTTCTCTTCGAACTACGTAAATCTTTGTGTCTCTTTGTTTAATTTCTGTTTGTGAGTGTGTGAGTGTGATTGATCTTGCTGCTTCCGCTACGACAACGATGAGCTATATTTGCCTATCTTATTTGTGATATGGCATCTCCAATCTTTCTTGAAGACATCAATCATAATCACAAGAAAATAAATTTCTCTAATGTATTGATTTCCTGTCTTTTTTGGGAAAAAATCTCTCAACTTCAACTACTGCATCTTTTCAGTTCAAGAAAGATGATAAATTCTATGTATTGGACTGCAGATCTTATATCAAGTCTGAAGCTGTTCTAAGAATAATGGAACATTTAGAGTTACCCTTTCCTCAGCTTGCACTTTTTCTCAAGTTTGTGCCACTGTAAGTCCTTCCTTACGATCATGTAAAGTTCTTCAAGTTTTGAGCATTATCTTTCAAATTCTGAATATTGATTGTGTTGCAGGTTTGTTAGAAACATTGCGTACGACAATATTGCTGATAATCGCTATACGCTATTTGGGCGCTCGGAGTCGTGTGAAATATAGAATTTAGTCCTATCATTGTAGAATTTGTATAGAATGATACTTGGGATTTGGGAATTAGAAATTAAGATAGATATTTGTTTGGTGAATAATACGAATTGGAGCTGATAAATGTCACGTGTTATGGTCATACTTGAAAGACGATTGTGACAACAAGCTGACTTTGTCAGTTCATATCATTAATCTCGGTAGCCCAGCAGCTGTACTATCTCGTTGCAGTATGAATATTTCTTCCCTTCATTTACCAGAG

mRNA sequence

GGAGGAAAAGCCAGTCGTGCATTTCCACCGACTCCAATGGCGCTTCCAATATCTGGCAGAGTTCCGGCACGTTTTGTCCTGCCGTCAACGGCGCACGTTAGACCACGACAGCCAGTGGCTTTCGTCTCTTTATCTTCTGCAACCAATGACGGAACGATCGATTGGGTCGAAGCAACTTCTGACTTCTTCGAGAAAGATACAAGACCAATAATGCTATTTGACGGTGTGTGCAATTTGTGCAATGGAGGTGTGAGATTTGTTCGTGCTAATGATCGAAACAGAAGAATACGATTAGAGGCTCTCCAAAGTGAAGCTGGGAAGAAGCTGTTAAGAAGATCAGGAAGAGCACCGGATGATATTTCGAGTGTTGTTCTTGTTGAAAAGGACAGATCTTATATCAAGTCTGAAGCTGTTCTAAGAATAATGGAACATTTAGAGTTACCCTTTCCTCAGCTTGCACTTTTTCTCAAGTTTGTGCCACTGTTTGTTAGAAACATTGCGTACGACAATATTGCTGATAATCGCTATACGCTATTTGGGCGCTCGGAGTCGTGTGAAATATAGAATTTAGTCCTATCATTGTAGAATTTGTATAGAATGATACTTGGGATTTGGGAATTAGAAATTAAGATAGATATTTGTTTGGTGAATAATACGAATTGGAGCTGATAAATGTCACGTGTTATGGTCATACTTGAAAGACGATTGTGACAACAAGCTGACTTTGTCAGTTCATATCATTAATCTCGGTAGCCCAGCAGCTGTACTATCTCGTTGCAGTATGAATATTTCTTCCCTTCATTTACCAGAG

Coding sequence (CDS)

ATGGCGCTTCCAATATCTGGCAGAGTTCCGGCACGTTTTGTCCTGCCGTCAACGGCGCACGTTAGACCACGACAGCCAGTGGCTTTCGTCTCTTTATCTTCTGCAACCAATGACGGAACGATCGATTGGGTCGAAGCAACTTCTGACTTCTTCGAGAAAGATACAAGACCAATAATGCTATTTGACGGTGTGTGCAATTTGTGCAATGGAGGTGTGAGATTTGTTCGTGCTAATGATCGAAACAGAAGAATACGATTAGAGGCTCTCCAAAGTGAAGCTGGGAAGAAGCTGTTAAGAAGATCAGGAAGAGCACCGGATGATATTTCGAGTGTTGTTCTTGTTGAAAAGGACAGATCTTATATCAAGTCTGAAGCTGTTCTAAGAATAATGGAACATTTAGAGTTACCCTTTCCTCAGCTTGCACTTTTTCTCAAGTTTGTGCCACTGTTTGTTAGAAACATTGCGTACGACAATATTGCTGATAATCGCTATACGCTATTTGGGCGCTCGGAGTCGTGTGAAATATAG

Protein sequence

MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSYIKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI

Homology

[Close]

BLAST of CmoCh14G014100 vs. ExPASy Swiss-Prot
Match: Q9SSR1 (DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g52590 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 6.9e-58
Identity = 114/169 (67.46%), Postives = 135/169 (79.88%), Query Frame = 0


Query: 12  RFVLPSTAHVRPRQPVAFVSLSSATNDGTI-----DWVEATSDFFEKDTRPIMLFDGVCN 71
           R  + S A VR       V +S++ N  TI     DWV+ TS FFE+D RPIMLFDGVCN
Sbjct: 11  RLTITSRAQVR-------VRVSASANQRTIRRDSVDWVKETSSFFEEDKRPIMLFDGVCN 70

Query: 72  LCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSYIKSEAV 131
           LCNGGV+FVR +DRNR IR EALQSEAGKKLL RSGRAPDDISSVVLVE DRSYIKSEAV
Sbjct: 71  LCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPDDISSVVLVENDRSYIKSEAV 130

Query: 132 LRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 176
           L+IM++++LPFPQLA FL+F PLFVR+  Y+N+A+NRY +FGRS+SCE+
Sbjct: 131 LKIMKYIDLPFPQLAFFLQFAPLFVRDFLYENVANNRYAMFGRSDSCEL 172

[Close]

BLAST of CmoCh14G014100 vs. ExPASy Swiss-Prot
Match: P40761 (Uncharacterized protein YuxK OS=Bacillus subtilis (strain 168) OX=224308 GN=yuxK PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 50/116 (43.10%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 58  IMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKD 117
           ++LFDGVCNLCNG V+F+   D +  I   +LQSE G+ LL++SG   D   S V +E  
Sbjct: 10  VLLFDGVCNLCNGAVQFIIKRDPDGLISFTSLQSETGQSLLKKSGLPTDRFDSFVFIEDG 69

Query: 118 RSYIKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESC 174
           + Y KS A +++  HL  P+    LF   VP  VR++ Y  IA NRY  FG+   C
Sbjct: 70  QVYTKSTAAIKVFRHLRGPWRLFVLFFA-VPKPVRDMVYSFIAKNRYKWFGKKNEC 124

[Close]

BLAST of CmoCh14G014100 vs. ExPASy TrEMBL
Match: A0A6J1GW36 (DCC family protein At1g52590, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457690 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.6e-92
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60
           MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML
Sbjct: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 176
           IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI
Sbjct: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of CmoCh14G014100 vs. ExPASy TrEMBL
Match: A0A6J1IYJ5 (DCC family protein At1g52590, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111479639 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.4e-92
Identity = 174/175 (99.43%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60
           MALP+SGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML
Sbjct: 1   MALPLSGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 176
           IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI
Sbjct: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of CmoCh14G014100 vs. ExPASy TrEMBL
Match: A0A6J1DJB0 (DCC family protein At1g52590, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021048 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.1e-78
Identity = 147/175 (84.00%), Postives = 158/175 (90.29%), Query Frame = 0


Query: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60
           MA+P+ GR+PARF+ P  A  RPR  +AF SLS AT   TIDW+EATSDFFEKD+RPIML
Sbjct: 49  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML 108

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 109 FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 168

Query: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 176
           IKSEAV+RIMEHLELPFPQLA FL+FVPLFVRN  Y+N+ADNRY LFGRSESCEI
Sbjct: 169 IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 223

[Close]

BLAST of CmoCh14G014100 vs. ExPASy TrEMBL
Match: A0A0A0KVF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004930 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.8e-76
Identity = 149/175 (85.14%), Postives = 156/175 (89.14%), Query Frame = 0


Query: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60
           MALP+SGR PA F+ PS        P+A  SLS    D TIDWVEATS+FFEKDTRPIML
Sbjct: 10  MALPLSGRFPAPFLPPSMRKAGLLHPIASASLSPTIKDETIDWVEATSNFFEKDTRPIML 69

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQS+AGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 70  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSDAGKKLLRRSGRAPDDISSVVLVEKDRSY 129

Query: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 176
           IKSEAVLRIME+LELPFPQLALFL+FVPLFVRNI YDNIADNRYTLFGRSESCEI
Sbjct: 130 IKSEAVLRIMEYLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI 184

[Close]

BLAST of CmoCh14G014100 vs. ExPASy TrEMBL
Match: A0A5D3E0H0 (DCC family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001690 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.2e-75
Identity = 150/176 (85.23%), Postives = 156/176 (88.64%), Query Frame = 0


Query: 1   MALPISGRVPARFVLPSTAHV-RPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIM 60
           MALP+SGR PA F+ PS         P+A  SLS  T D TIDWVEATSDFFEKDTRPIM
Sbjct: 10  MALPLSGRFPAPFLPPSMRKAGMLLHPIASASLSPITKDETIDWVEATSDFFEKDTRPIM 69

Query: 61  LFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRS 120
           LFDGVCNLCNGGVRFVRANDRNRRIRLEALQS+AGKKLLRRSGRAPDDISSVVLVEKDRS
Sbjct: 70  LFDGVCNLCNGGVRFVRANDRNRRIRLEALQSDAGKKLLRRSGRAPDDISSVVLVEKDRS 129

Query: 121 YIKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 176
           YIKSEAVLRIME+LELPFPQLA FL+FVPLFVRNI YDNIADNRYTLFGRSESCEI
Sbjct: 130 YIKSEAVLRIMEYLELPFPQLAFFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI 185

[Close]

BLAST of CmoCh14G014100 vs. NCBI nr
Match: XP_022955810.1 (DCC family protein At1g52590, chloroplastic [Cucurbita moschata])

HSP 1 Score: 347.8 bits (891), Expect = 5.4e-92
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60
           MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML
Sbjct: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 176
           IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI
Sbjct: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of CmoCh14G014100 vs. NCBI nr
Match: XP_022980169.1 (DCC family protein At1g52590, chloroplastic [Cucurbita maxima])

HSP 1 Score: 347.1 bits (889), Expect = 9.2e-92
Identity = 174/175 (99.43%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60
           MALP+SGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML
Sbjct: 1   MALPLSGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 176
           IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI
Sbjct: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of CmoCh14G014100 vs. NCBI nr
Match: KAG6581957.1 (DCC family protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 345.1 bits (884), Expect = 3.5e-91
Identity = 174/175 (99.43%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60
           MALPISGRVPARFVLPSTA+VRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML
Sbjct: 1   MALPISGRVPARFVLPSTANVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 176
           IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI
Sbjct: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of CmoCh14G014100 vs. NCBI nr
Match: XP_023527546.1 (DCC family protein At1g52590, chloroplastic, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.7 bits (883), Expect = 4.5e-91
Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60
           MALP+SGRVPARFVLPS AHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML
Sbjct: 14  MALPLSGRVPARFVLPSMAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 73

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 74  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 133

Query: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 176
           IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI
Sbjct: 134 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 188

[Close]

BLAST of CmoCh14G014100 vs. NCBI nr
Match: KAG7018377.1 (Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 337.4 bits (864), Expect = 7.3e-89
Identity = 170/172 (98.84%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60
           MALPISGRVPARFVLPSTA+VRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML
Sbjct: 1   MALPISGRVPARFVLPSTANVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRF+RANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFIRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSES 173
           IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSES
Sbjct: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSES 172

[Close]

BLAST of CmoCh14G014100 vs. TAIR 10
Match: AT1G52590.1 (Putative thiol-disulphide oxidoreductase DCC )

HSP 1 Score: 224.9 bits (572), Expect = 4.9e-59
Identity = 114/169 (67.46%), Postives = 135/169 (79.88%), Query Frame = 0


Query: 12  RFVLPSTAHVRPRQPVAFVSLSSATNDGTI-----DWVEATSDFFEKDTRPIMLFDGVCN 71
           R  + S A VR       V +S++ N  TI     DWV+ TS FFE+D RPIMLFDGVCN
Sbjct: 11  RLTITSRAQVR-------VRVSASANQRTIRRDSVDWVKETSSFFEEDKRPIMLFDGVCN 70

Query: 72  LCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSYIKSEAV 131
           LCNGGV+FVR +DRNR IR EALQSEAGKKLL RSGRAPDDISSVVLVE DRSYIKSEAV
Sbjct: 71  LCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPDDISSVVLVENDRSYIKSEAV 130

Query: 132 LRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 176
           L+IM++++LPFPQLA FL+F PLFVR+  Y+N+A+NRY +FGRS+SCE+
Sbjct: 131 LKIMKYIDLPFPQLAFFLQFAPLFVRDFLYENVANNRYAMFGRSDSCEL 172

[Close]

BLAST of CmoCh14G014100 vs. TAIR 10
Match: AT1G24095.1 (Putative thiol-disulphide oxidoreductase DCC )

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 43/118 (36.44%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 58  IMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKD 117
           ++++DGVC+LC+GGV+++   D+ R+I+   LQS+A +  L  SG   +D+    L  + 
Sbjct: 75  VVVYDGVCHLCHGGVKWIIKADKYRKIKFCCLQSKAAEPYLEVSGVTREDVQKRFLFIEG 134

Query: 118 RSYI--KSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESC 174
             +    S A LR++ +L LP+  L  F   VP  +R+  YD +A NRY  FG++E C
Sbjct: 135 LGFYHQASTAALRVVSYLPLPYSALNAF-SIVPTPLRDSVYDYVAKNRYDWFGKAEDC 191

The following BLAST results are available for this feature:

BLAST of CmoCh14G014100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSR1	6.9e-58	67.46	DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
P40761	1.3e-19	43.10	Uncharacterized protein YuxK OS=Bacillus subtilis (strain 168) OX=224308 GN=yuxK...	[more]

BLAST of CmoCh14G014100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GW36	2.6e-92	100.00	DCC family protein At1g52590, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IYJ5	4.4e-92	99.43	DCC family protein At1g52590, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1DJB0	2.1e-78	84.00	DCC family protein At1g52590, chloroplastic OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A0A0KVF0	5.8e-76	85.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004930 PE=4 SV=1	[more]
A0A5D3E0H0	2.2e-75	85.23	DCC family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G0...	[more]

BLAST of CmoCh14G014100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955810.1	5.4e-92	100.00	DCC family protein At1g52590, chloroplastic [Cucurbita moschata]	[more]
XP_022980169.1	9.2e-92	99.43	DCC family protein At1g52590, chloroplastic [Cucurbita maxima]	[more]
KAG6581957.1	3.5e-91	99.43	DCC family protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023527546.1	4.5e-91	98.86	DCC family protein At1g52590, chloroplastic, partial [Cucurbita pepo subsp. pepo...	[more]
KAG7018377.1	7.3e-89	98.84	Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosper...	[more]

BLAST of CmoCh14G014100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52590.1	4.9e-59	67.46	Putative thiol-disulphide oxidoreductase DCC	[more]
AT1G24095.1	1.1e-15	36.44	Putative thiol-disulphide oxidoreductase DCC	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007263	DCC1-like thiol-disulfide oxidoreductase family	PFAM	PF04134	DUF393	coord: 60..169 e-value: 7.4E-29 score: 101.4
None	No IPR available	PANTHER	PTHR33639:SF2	THIOL-DISULFIDE OXIDOREDUCTASE DCC	coord: 29..175
None	No IPR available	PANTHER	PTHR33639	THIOL-DISULFIDE OXIDOREDUCTASE DCC	coord: 29..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G014100.1	CmoCh14G014100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0015035	protein-disulfide reductase activity