CmoCh14G012220 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G012220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Nucleoside-diphosphate kinase
Location	Cmo_Chr14: 10389683 .. 10390705 (+)
RNA-Seq Expression	CmoCh14G012220
Synteny	CmoCh14G012220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAAAGGCCTCTCCTTTGCAAAAATGAAGGTAAATTTTAAACAAATTTGCATGTTCTTTTCTTTTTCTTCTTCTATTTTTTGCTAATTAGCCCTTCAATTTTGATCATTTTATTTTTGGTTTCAGTTCTTGAGTTGGATGCAAAGTAATAAACTCCATGGAAGAGTAAAATTTCAGAACAAATCATCAAATTCAAACCCTTCAAGTAATTGCACTAAACTTTTGTTTTTTTTTTTTTGTTATGAACTCACCATTATTTTACATGTATGATCATGATCTTTCATGAACAATAATCAGTTGAGCAACCTGAAGAAACCAGCCCCTCTTTGCCTCTTGGCTTGCTAGCAATTGGAACTTTTGGCAACAATGTGTTAAGAACGAACAAGACCGATGTTGAAAACGTCGTCGTCGATGCTCGGTCTCCAGGGAAAGAAATGGAAGACGTTGAGCTGAGGGAGATTGATGATGAAATGAAAGAGAAGATTGGTTTAATCATTGGGGATGATGAGAAACATAATCCCAAATCCATTGTTAGGAGATCTGTTTCATTTCTTATCAAGAAGGTCTTTGTCTGTGGCGGAAGTGGTTTTGCACCGCCGCCGCCACCGCCGAACTTCATAGATACACCGCAAGATGCAACGATGAAGAAGGTACGTAAACAACTGATATCAATGTATAATGTCTTAACGAGTATATTAGGTCGAGTTATAGTTGGTGATCAGTAATAATGTGCAGATATTGAGGATGATGCTTCACAAGAAAATTTACCCTAAGAGTTCTTCACAAACAGCTTCATTGAAGAGATTCATAAAGGAGAAAGAGAGGAGAGATAAGAGAAATGAAGAAGAAGAACGATGATTGTAATGTAAATAATTGAGGGTCAAAATGGATTCAATAATGTAAGCTAGAGAATTGAAATTTGAATGGCCAATAGCCATAAACCCACATGATCTTGTTTCCCTTTTTAACAATTGTCCCAAAAGCTGATGATGTATTGAATCTTCTTGATCTTATATATTTTAC

mRNA sequence

CTCAAAGGCCTCTCCTTTGCAAAAATGAAGTTCTTGAGTTGGATGCAAAGTAATAAACTCCATGGAAGAGTAAAATTTCAGAACAAATCATCAAATTCAAACCCTTCAATTGAGCAACCTGAAGAAACCAGCCCCTCTTTGCCTCTTGGCTTGCTAGCAATTGGAACTTTTGGCAACAATGTGTTAAGAACGAACAAGACCGATGTTGAAAACGTCGTCGTCGATGCTCGGTCTCCAGGGAAAGAAATGGAAGACGTTGAGCTGAGGGAGATTGATGATGAAATGAAAGAGAAGATTGGTTTAATCATTGGGGATGATGAGAAACATAATCCCAAATCCATTGTTAGGAGATCTGTTTCATTTCTTATCAAGAAGGTCTTTGTCTGTGGCGGAAGTGGTTTTGCACCGCCGCCGCCACCGCCGAACTTCATAGATACACCGCAAGATGCAACGATGAAGAAGATATTGAGGATGATGCTTCACAAGAAAATTTACCCTAAGAGTTCTTCACAAACAGCTTCATTGAAGAGATTCATAAAGGAGAAAGAGAGGAGAGATAAGAGAAATGAAGAAGAAGAACGATGATTGTAATGTAAATAATTGAGGGTCAAAATGGATTCAATAATGTAAGCTAGAGAATTGAAATTTGAATGGCCAATAGCCATAAACCCACATGATCTTGTTTCCCTTTTTAACAATTGTCCCAAAAGCTGATGATGTATTGAATCTTCTTGATCTTATATATTTTAC

Coding sequence (CDS)

ATGAAGTTCTTGAGTTGGATGCAAAGTAATAAACTCCATGGAAGAGTAAAATTTCAGAACAAATCATCAAATTCAAACCCTTCAATTGAGCAACCTGAAGAAACCAGCCCCTCTTTGCCTCTTGGCTTGCTAGCAATTGGAACTTTTGGCAACAATGTGTTAAGAACGAACAAGACCGATGTTGAAAACGTCGTCGTCGATGCTCGGTCTCCAGGGAAAGAAATGGAAGACGTTGAGCTGAGGGAGATTGATGATGAAATGAAAGAGAAGATTGGTTTAATCATTGGGGATGATGAGAAACATAATCCCAAATCCATTGTTAGGAGATCTGTTTCATTTCTTATCAAGAAGGTCTTTGTCTGTGGCGGAAGTGGTTTTGCACCGCCGCCGCCACCGCCGAACTTCATAGATACACCGCAAGATGCAACGATGAAGAAGATATTGAGGATGATGCTTCACAAGAAAATTTACCCTAAGAGTTCTTCACAAACAGCTTCATTGAAGAGATTCATAAAGGAGAAAGAGAGGAGAGATAAGAGAAATGAAGAAGAAGAACGATGA

Protein sequence

MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTDVENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKKVFVCGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKRNEEEER

Homology

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BLAST of CmoCh14G012220 vs. ExPASy Swiss-Prot
Match: A0A072TLV8 (Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS OS=Medicago truncatula OX=3880 GN=NGR PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-16
Identity = 77/246 (31.30%), Postives = 119/246 (48.37%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSI----EQPEETSPSLPLGLLAIGTFGNNVLRT 60
           MKF +WMQ NKL G  K +N+ SN++ S      +P E     P  LLAIGTFGNN   T
Sbjct: 1   MKFFNWMQ-NKLGG--KQENRKSNTSTSTTYAKPEPREEFSDWPHSLLAIGTFGNNNEIT 60

Query: 61  NKTDVENVVVDARSPGKEMEDVELREI--------------------------------- 120
              + +N   +  S  +E+ D    EI                                 
Sbjct: 61  QNIENQNTQQEDPSSSEEVPDFTPEEIGKLQKELTRLLRRKPNVEKEISELPLDRFLNCP 120

Query: 121 ---------------------DDEMKEKIGLIIGDDE----KHNPKSIVRRSVSFLIKKV 180
                                D+++++ + +I+   +    + + KSI ++S+SFL+KK+
Sbjct: 121 SSLEVDRRISNALCSESGGDKDEDIEKTLSVILDKCKDICAEKSKKSIGKKSISFLLKKM 180

Query: 181 FVCGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRD 185
           FVC  SGFA   P P+  DT Q++ M+K+LR MLHKK+Y +++S+   LK+ ++ K+   
Sbjct: 181 FVC-RSGFA---PTPSLRDTLQESRMEKLLRTMLHKKLYTQNNSRAPVLKKCLENKKSIK 239

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BLAST of CmoCh14G012220 vs. ExPASy Swiss-Prot
Match: A0A251PW43 (Protein DEEPER ROOTING 1 OS=Prunus persica OX=3760 GN=DRO1 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.4e-16
Identity = 79/250 (31.60%), Postives = 125/250 (50.00%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSSN-----SNPSIEQPEETSPSLPLGLLAIGTFGNNVLR 60
           MK   WMQ NKL+G  K  NK  N     ++P+ ++P E     P GLLAIGTFGNN L+
Sbjct: 1   MKLFGWMQ-NKLNG--KQGNKKPNTVPITTHPAKQEPREEFSDWPHGLLAIGTFGNNDLK 60

Query: 61  TNKTDVENVVVD---------------------------ARSPG--KEMEDVELREI--- 120
            N  + +++  D                            R P   KE+ D+ L      
Sbjct: 61  ENAAESQDIQEDPTSSEEILDNFTPEEVGKLHKELTKLLTRKPNIEKEIADLPLDRFLNC 120

Query: 121 -----------------------DDEMKEKIGLIIGDDEK----HNPKSIVRRSVSFLIK 180
                                  D+++++ I +I+G  ++     N K+I ++S+SFL+K
Sbjct: 121 PSSLEVDRRNSNALCSDSADDHKDEDIEKTISVILGRCKEICGDKNKKAIGKKSISFLLK 180

Query: 181 KVFVCGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIY-PKSSSQTASLKRFIKEKE 186
           K+FVC  SGFA   P P+  DT Q++ M+K+LR+ML+KKI  P+ SS+ AS+K+++++++
Sbjct: 181 KMFVC-RSGFA---PQPSLRDTLQESRMEKLLRVMLNKKIINPQGSSRAASMKKYLEDRQ 240

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BLAST of CmoCh14G012220 vs. ExPASy Swiss-Prot
Match: Q5XVG3 (Protein LAZY 4 OS=Arabidopsis thaliana OX=3702 GN=LAZY4 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.9e-15
Identity = 78/268 (29.10%), Postives = 114/268 (42.54%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60
           MKF  WMQ NKLHG+ +  ++ S S+ S   P E     P GLLAIGTFGN        D
Sbjct: 1   MKFFGWMQ-NKLHGKQEITHRPSISSASSHHPREEFNDWPHGLLAIGTFGNKKQTPQTLD 60

Query: 61  ----VENVVVDARSPGKEMEDV--ELREIDD----------------------------- 120
                E  V +    G++ +D   EL   DD                             
Sbjct: 61  QEVIQEETVSNLHVEGRQAQDTDQELSSSDDLEEDFTPEEVGKLQKELTKLLTRRSKKRK 120

Query: 121 --------------------------------------EMKEKIGLIIG----------D 180
                                                 +++  I +I+G          +
Sbjct: 121 SDVNRELANLPLDRFLNCPSSLEVDRRISNALCDEKEEDIERTISVILGRCKAISTESKN 180

Query: 181 DEKHNPKSIVRRSVSFLIKKVFVCGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIY 186
             K N + + + SVS L+KK+FVC   GF+ P P P   DT Q+  M+K+LRMMLHKK+ 
Sbjct: 181 KTKKNKRDLSKTSVSHLLKKMFVC-TEGFS-PVPRPILRDTFQETRMEKLLRMMLHKKVN 240

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BLAST of CmoCh14G012220 vs. ExPASy Swiss-Prot
Match: Q58G53 (Protein LAZY 2 OS=Arabidopsis thaliana OX=3702 GN=LAZY2 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-09
Identity = 48/133 (36.09%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 63  NVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGD------DEKHNPK--SIVRRSVSFL 122
           + VVD+    KE          ++M+  I +I+G       + K+N K   I + SVS+L
Sbjct: 150 SAVVDSSEENKE----------EDMERTINVILGRCKEISIESKNNKKKRDISKNSVSYL 209

Query: 123 IKKVFVCGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASL--KRFIK 182
            KK+FVC         P P+  DT Q++ M+K+L+MMLHKKI  ++SS+  SL  KR+++
Sbjct: 210 FKKIFVCADG--ISTAPSPSLRDTLQESRMEKLLKMMLHKKINAQASSKPTSLTTKRYLQ 269

Query: 183 EKERRDKRNEEEE 186
           +K++   ++EEEE
Sbjct: 270 DKKQLSLKSEEEE 270

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BLAST of CmoCh14G012220 vs. ExPASy Swiss-Prot
Match: Q1G3U5 (Protein LAZY 3 OS=Arabidopsis thaliana OX=3702 GN=LAZY3 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-08
Identity = 56/181 (30.94%), Postives = 85/181 (46.96%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLG---LLAIGTFGNNVLRTN 60
           MK  SW+Q  KL G+ +     S+  PS     +    LP      LAIGT GNN+    
Sbjct: 1   MKIFSWVQ-RKLSGKKRVPTSDSSQEPSSPPLSKEVQGLPQDEETFLAIGTLGNNIF--- 60

Query: 61  KTDVENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKK 120
                        P +E E+ E     D       + IG           ++S+SFL+KK
Sbjct: 61  -------------PKQEEEEEETDSSKDITPVNTDVTIGK----------KKSLSFLLKK 120

Query: 121 VFVCGGSGFAPPPPPPNFI--DTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKE 177
           +FVC  SGF  PPP  +    D+  +  M+K+LR +L+KKI+P+ S+  A  K++++   
Sbjct: 121 MFVC-TSGFKTPPPLLDLSRGDSLHNTRMEKMLRTILNKKIHPQRSNSIA--KKYLESNH 151

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BLAST of CmoCh14G012220 vs. ExPASy TrEMBL
Match: A0A6J1GV88 (uncharacterized protein LOC111457786 OS=Cucurbita moschata OX=3662 GN=LOC111457786 PE=3 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.2e-96
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60
           MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD
Sbjct: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60

Query: 61  VENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKKVFV 120
           VENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKKVFV
Sbjct: 61  VENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKKVFV 120

Query: 121 CGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR 180
           CGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR
Sbjct: 121 CGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR 180

Query: 181 NEEEER 187
           NEEEER
Sbjct: 181 NEEEER 186

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BLAST of CmoCh14G012220 vs. ExPASy TrEMBL
Match: A0A6J1IUE0 (uncharacterized protein LOC111480009 OS=Cucurbita maxima OX=3661 GN=LOC111480009 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.6e-90
Identity = 176/185 (95.14%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60
           MKFLSWMQSNKLHG+VKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD
Sbjct: 1   MKFLSWMQSNKLHGKVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60

Query: 61  VENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKKVFV 120
           VENVVVDARS GKE ED ELREIDDEMKEKIGL+IGDDEK+NPKSIVRRSVSFL+KKVFV
Sbjct: 61  VENVVVDARSLGKETEDFELREIDDEMKEKIGLMIGDDEKNNPKSIVRRSVSFLVKKVFV 120

Query: 121 CGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR 180
           CGGSGFAPPP PPNF+DTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR
Sbjct: 121 CGGSGFAPPPLPPNFMDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR 180

Query: 181 NEEEE 186
           NEEEE
Sbjct: 181 NEEEE 185

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BLAST of CmoCh14G012220 vs. ExPASy TrEMBL
Match: A0A1S3CCN5 (uncharacterized protein LOC103499172 OS=Cucumis melo OX=3656 GN=LOC103499172 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 5.8e-50
Identity = 135/233 (57.94%), Postives = 162/233 (69.53%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSS--NSNPS-IEQP-EETSPSLPLGLLAIGTFGNNV--L 60
           MK LSWMQS KL G+VKFQNK S  +SNPS IEQP EE+S SLPLGLLAIGTFGNN   +
Sbjct: 1   MKLLSWMQS-KLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNTNDV 60

Query: 61  RTNKTDVENVVVDARSPGKEMED------VELREIDDEM--------------------- 120
           +  KTDVEN V+DA+S   E +D       ++ E+++E+                     
Sbjct: 61  KVLKTDVENAVIDAKSTSNETDDDNDSSLKDVPELEEELTKLWQQNSQFREEESDDFDDD 120

Query: 121 -------KEKIGLII----GDDEKHN--PKSIVRRSVSFLIKKVFVCGGSGFA--PPPPP 180
                  K+ IGL++    GD EK+N  P SIV+RSV+FL+KK+F+C GSGFA  PP PP
Sbjct: 121 QTEEQVVKKNIGLVVREWQGDVEKNNDPPISIVKRSVTFLVKKIFIC-GSGFAPLPPSPP 180

Query: 181 PNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKRNEEEE 186
           PNF+D PQDATMKKILRMML KKIYPK+SSQ ASLKRF+KEKERRDKRNE+EE
Sbjct: 181 PNFMDRPQDATMKKILRMMLEKKIYPKNSSQMASLKRFLKEKERRDKRNEDEE 231

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BLAST of CmoCh14G012220 vs. ExPASy TrEMBL
Match: A0A5A7UIH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00100 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.0e-33
Identity = 101/195 (51.79%), Postives = 126/195 (64.62%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSS--NSNPS-IEQP-EETSPSLPLGLLAIGTFGNNV--L 60
           MK LSWMQS KL G+VKFQNK S  +SNPS IEQP EE+S SLPLGLLAIGTFGNN   +
Sbjct: 1   MKLLSWMQS-KLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNTNDV 60

Query: 61  RTNKTDVENVVVDARSPGKEMED------VELREIDDEM--------------------- 120
           +  KTDVEN V+DA+S   E +D       ++ E+++E+                     
Sbjct: 61  KVLKTDVENAVIDAKSTSNETDDDNDSSLKDVPELEEELTKLWQQNSQFREEESDDFDDD 120

Query: 121 -------KEKIGLII----GDDEKHN--PKSIVRRSVSFLIKKVFVCGGSGFA--PPPPP 148
                  K+ IGL++    GD EK+N  P SIV+RSV+FL+KK+F+C GSGFA  PP PP
Sbjct: 121 QTEEQVVKKNIGLVVREWQGDVEKNNDPPISIVKRSVTFLVKKIFIC-GSGFAPLPPSPP 180

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BLAST of CmoCh14G012220 vs. ExPASy TrEMBL
Match: A0A0A0L9D5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G645860 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 4.2e-24
Identity = 81/168 (48.21%), Postives = 104/168 (61.90%), Query Frame = 0


Query: 25  SNPSIEQP-EETSPSLPLGLLAIGTFGNNV--LRTNKTDVENVVVDARSPGKEMED---- 84
           + P+IEQP EE+S SLPLGLLAIGTFGNN+  L+  KTD EN ++DA+S   E +D    
Sbjct: 65  NKPAIEQPAEESSASLPLGLLAIGTFGNNINELKVVKTDDENAIIDAKSTLNETDDDNDG 124

Query: 85  ------------------------VELREIDDE------MKEKIGLII----GDDEKHN- 144
                                    E  + DD+      +K+ +GL++    GD EK+N 
Sbjct: 125 SLEGVPELEEELAKLWQQNSALREEESDDFDDDQIEEQIVKKNVGLVVREWEGDVEKNND 184

Query: 145 PK-SIVRRSVSFLIKKVFVCGGSGFA--PPPPPPNFIDTPQDATMKKI 148
           P+ SIV+RSVSFLIKK+F+C GSGFA  PP PPPNF+D PQDATMKK+
Sbjct: 185 PRISIVKRSVSFLIKKIFIC-GSGFAPLPPSPPPNFMDRPQDATMKKV 231

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BLAST of CmoCh14G012220 vs. NCBI nr
Match: XP_022955951.1 (uncharacterized protein LOC111457786 [Cucurbita moschata])

HSP 1 Score: 360.9 bits (925), Expect = 6.5e-96
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60
           MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD
Sbjct: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60

Query: 61  VENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKKVFV 120
           VENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKKVFV
Sbjct: 61  VENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKKVFV 120

Query: 121 CGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR 180
           CGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR
Sbjct: 121 CGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR 180

Query: 181 NEEEER 187
           NEEEER
Sbjct: 181 NEEEER 186

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BLAST of CmoCh14G012220 vs. NCBI nr
Match: KAG7018221.1 (hypothetical protein SDJN02_20089, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352.1 bits (902), Expect = 3.0e-93
Identity = 179/185 (96.76%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60
           MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD
Sbjct: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60

Query: 61  VENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKKVFV 120
           VENVVVDARSPGKEMED+ELREIDDEMKEKIGLIIGDDEKHNPKSIV+RSVSFL+KKVFV
Sbjct: 61  VENVVVDARSPGKEMEDIELREIDDEMKEKIGLIIGDDEKHNPKSIVKRSVSFLVKKVFV 120

Query: 121 CGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR 180
           CGGSGF PPPPP NF+DTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR
Sbjct: 121 CGGSGFTPPPPPQNFMDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR 180

Query: 181 NEEEE 186
           NEEEE
Sbjct: 181 NEEEE 185

[Close]

BLAST of CmoCh14G012220 vs. NCBI nr
Match: XP_023527029.1 (uncharacterized protein LOC111790378 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342.8 bits (878), Expect = 1.8e-90
Identity = 174/185 (94.05%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60
           MKFLSWMQSNKLHGRVKFQNKSSNSNPSIE+ EETSPSLPLGLL+IGTFGNNVLRTNKTD
Sbjct: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEEREETSPSLPLGLLSIGTFGNNVLRTNKTD 60

Query: 61  VENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKKVFV 120
           VENVVVDARSPGKE ED+ELREIDDEMKEKIGL+IGDDEKHNPKSIV+RSVSFL+KKVFV
Sbjct: 61  VENVVVDARSPGKETEDIELREIDDEMKEKIGLMIGDDEKHNPKSIVKRSVSFLVKKVFV 120

Query: 121 CGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR 180
           CGG GFAPP PPPNF+DTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR
Sbjct: 121 CGGGGFAPPQPPPNFMDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR 180

Query: 181 NEEEE 186
           NEEEE
Sbjct: 181 NEEEE 185

[Close]

BLAST of CmoCh14G012220 vs. NCBI nr
Match: XP_022980726.1 (uncharacterized protein LOC111480009 [Cucurbita maxima])

HSP 1 Score: 341.3 bits (874), Expect = 5.3e-90
Identity = 176/185 (95.14%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60
           MKFLSWMQSNKLHG+VKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD
Sbjct: 1   MKFLSWMQSNKLHGKVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60

Query: 61  VENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKKVFV 120
           VENVVVDARS GKE ED ELREIDDEMKEKIGL+IGDDEK+NPKSIVRRSVSFL+KKVFV
Sbjct: 61  VENVVVDARSLGKETEDFELREIDDEMKEKIGLMIGDDEKNNPKSIVRRSVSFLVKKVFV 120

Query: 121 CGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR 180
           CGGSGFAPPP PPNF+DTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR
Sbjct: 121 CGGSGFAPPPLPPNFMDTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR 180

Query: 181 NEEEE 186
           NEEEE
Sbjct: 181 NEEEE 185

[Close]

BLAST of CmoCh14G012220 vs. NCBI nr
Match: KAG6581771.1 (Sm-like protein LSM1B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 272.3 bits (695), Expect = 3.0e-69
Identity = 139/174 (79.89%), Postives = 154/174 (88.51%), Query Frame = 0


Query: 7   MQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTDVENVVV 66
           MQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTDVENVVV
Sbjct: 1   MQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTDVENVVV 60

Query: 67  DARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKKVFVCGGSGF 126
           DARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIV+RSVSFL+KKVFVCGGSGF
Sbjct: 61  DARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVKRSVSFLVKKVFVCGGSGF 120

Query: 127 APPPPPPNFIDTPQDATMKKILRMMLHK-KIYPKSSSQTASLKRFIKEKERRDK 180
            PPPPP NF+DTPQDATMKK+ + ++    +  ++    ++ +R + E +  DK
Sbjct: 121 TPPPPPQNFMDTPQDATMKKVRKQLVSMYNVLTRNFVVESAFERIVAENQYCDK 174

[Close]

BLAST of CmoCh14G012220 vs. TAIR 10
Match: AT1G72490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17400.1); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 58; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 4.2e-16
Identity = 78/268 (29.10%), Postives = 114/268 (42.54%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60
           MKF  WMQ NKLHG+ +  ++ S S+ S   P E     P GLLAIGTFGN        D
Sbjct: 1   MKFFGWMQ-NKLHGKQEITHRPSISSASSHHPREEFNDWPHGLLAIGTFGNKKQTPQTLD 60

Query: 61  ----VENVVVDARSPGKEMEDV--ELREIDD----------------------------- 120
                E  V +    G++ +D   EL   DD                             
Sbjct: 61  QEVIQEETVSNLHVEGRQAQDTDQELSSSDDLEEDFTPEEVGKLQKELTKLLTRRSKKRK 120

Query: 121 --------------------------------------EMKEKIGLIIG----------D 180
                                                 +++  I +I+G          +
Sbjct: 121 SDVNRELANLPLDRFLNCPSSLEVDRRISNALCDEKEEDIERTISVILGRCKAISTESKN 180

Query: 181 DEKHNPKSIVRRSVSFLIKKVFVCGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIY 186
             K N + + + SVS L+KK+FVC   GF+ P P P   DT Q+  M+K+LRMMLHKK+ 
Sbjct: 181 KTKKNKRDLSKTSVSHLLKKMFVC-TEGFS-PVPRPILRDTFQETRMEKLLRMMLHKKVN 240

[Close]

BLAST of CmoCh14G012220 vs. TAIR 10
Match: AT1G17400.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-10
Identity = 48/133 (36.09%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 63  NVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGD------DEKHNPK--SIVRRSVSFL 122
           + VVD+    KE          ++M+  I +I+G       + K+N K   I + SVS+L
Sbjct: 150 SAVVDSSEENKE----------EDMERTINVILGRCKEISIESKNNKKKRDISKNSVSYL 209

Query: 123 IKKVFVCGGSGFAPPPPPPNFIDTPQDATMKKILRMMLHKKIYPKSSSQTASL--KRFIK 182
            KK+FVC         P P+  DT Q++ M+K+L+MMLHKKI  ++SS+  SL  KR+++
Sbjct: 210 FKKIFVCADG--ISTAPSPSLRDTLQESRMEKLLKMMLHKKINAQASSKPTSLTTKRYLQ 269

Query: 183 EKERRDKRNEEEE 186
           +K++   ++EEEE
Sbjct: 270 DKKQLSLKSEEEE 270

[Close]

BLAST of CmoCh14G012220 vs. TAIR 10
Match: AT1G19115.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 9.9e-10
Identity = 56/181 (30.94%), Postives = 85/181 (46.96%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLG---LLAIGTFGNNVLRTN 60
           MK  SW+Q  KL G+ +     S+  PS     +    LP      LAIGT GNN+    
Sbjct: 1   MKIFSWVQ-RKLSGKKRVPTSDSSQEPSSPPLSKEVQGLPQDEETFLAIGTLGNNIF--- 60

Query: 61  KTDVENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKK 120
                        P +E E+ E     D       + IG           ++S+SFL+KK
Sbjct: 61  -------------PKQEEEEEETDSSKDITPVNTDVTIGK----------KKSLSFLLKK 120

Query: 121 VFVCGGSGFAPPPPPPNFI--DTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKE 177
           +FVC  SGF  PPP  +    D+  +  M+K+LR +L+KKI+P+ S+  A  K++++   
Sbjct: 121 MFVC-TSGFKTPPPLLDLSRGDSLHNTRMEKMLRTILNKKIHPQRSNSIA--KKYLESNH 151

[Close]

BLAST of CmoCh14G012220 vs. TAIR 10
Match: AT1G19115.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 9.9e-10
Identity = 56/181 (30.94%), Postives = 85/181 (46.96%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLG---LLAIGTFGNNVLRTN 60
           MK  SW+Q  KL G+ +     S+  PS     +    LP      LAIGT GNN+    
Sbjct: 1   MKIFSWVQ-RKLSGKKRVPTSDSSQEPSSPPLSKEVQGLPQDEETFLAIGTLGNNIF--- 60

Query: 61  KTDVENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKK 120
                        P +E E+ E     D       + IG           ++S+SFL+KK
Sbjct: 61  -------------PKQEEEEEETDSSKDITPVNTDVTIGK----------KKSLSFLLKK 120

Query: 121 VFVCGGSGFAPPPPPPNFI--DTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKE 177
           +FVC  SGF  PPP  +    D+  +  M+K+LR +L+KKI+P+ S+  A  K++++   
Sbjct: 121 MFVC-TSGFKTPPPLLDLSRGDSLHNTRMEKMLRTILNKKIHPQRSNSIA--KKYLESNH 151

[Close]

BLAST of CmoCh14G012220 vs. TAIR 10
Match: AT1G19115.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 9.9e-10
Identity = 56/181 (30.94%), Postives = 85/181 (46.96%), Query Frame = 0


Query: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLG---LLAIGTFGNNVLRTN 60
           MK  SW+Q  KL G+ +     S+  PS     +    LP      LAIGT GNN+    
Sbjct: 1   MKIFSWVQ-RKLSGKKRVPTSDSSQEPSSPPLSKEVQGLPQDEETFLAIGTLGNNIF--- 60

Query: 61  KTDVENVVVDARSPGKEMEDVELREIDDEMKEKIGLIIGDDEKHNPKSIVRRSVSFLIKK 120
                        P +E E+ E     D       + IG           ++S+SFL+KK
Sbjct: 61  -------------PKQEEEEEETDSSKDITPVNTDVTIGK----------KKSLSFLLKK 120

Query: 121 VFVCGGSGFAPPPPPPNFI--DTPQDATMKKILRMMLHKKIYPKSSSQTASLKRFIKEKE 177
           +FVC  SGF  PPP  +    D+  +  M+K+LR +L+KKI+P+ S+  A  K++++   
Sbjct: 121 MFVC-TSGFKTPPPLLDLSRGDSLHNTRMEKMLRTILNKKIHPQRSNSIA--KKYLESNH 151

The following BLAST results are available for this feature:

BLAST of CmoCh14G012220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A072TLV8	1.8e-16	31.30	Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS OS=Medicago truncatula OX=3880 GN...	[more]
A0A251PW43	2.4e-16	31.60	Protein DEEPER ROOTING 1 OS=Prunus persica OX=3760 GN=DRO1 PE=2 SV=1	[more]
Q5XVG3	5.9e-15	29.10	Protein LAZY 4 OS=Arabidopsis thaliana OX=3702 GN=LAZY4 PE=1 SV=1	[more]
Q58G53	1.7e-09	36.09	Protein LAZY 2 OS=Arabidopsis thaliana OX=3702 GN=LAZY2 PE=2 SV=1	[more]
Q1G3U5	1.4e-08	30.94	Protein LAZY 3 OS=Arabidopsis thaliana OX=3702 GN=LAZY3 PE=2 SV=1	[more]

BLAST of CmoCh14G012220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GV88	3.2e-96	100.00	uncharacterized protein LOC111457786 OS=Cucurbita moschata OX=3662 GN=LOC1114577...	[more]
A0A6J1IUE0	2.6e-90	95.14	uncharacterized protein LOC111480009 OS=Cucurbita maxima OX=3661 GN=LOC111480009...	[more]
A0A1S3CCN5	5.8e-50	57.94	uncharacterized protein LOC103499172 OS=Cucumis melo OX=3656 GN=LOC103499172 PE=...	[more]
A0A5A7UIH7	5.0e-33	51.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L9D5	4.2e-24	48.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G645860 PE=3 SV=1	[more]

BLAST of CmoCh14G012220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955951.1	6.5e-96	100.00	uncharacterized protein LOC111457786 [Cucurbita moschata]	[more]
KAG7018221.1	3.0e-93	96.76	hypothetical protein SDJN02_20089, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023527029.1	1.8e-90	94.05	uncharacterized protein LOC111790378 [Cucurbita pepo subsp. pepo]	[more]
XP_022980726.1	5.3e-90	95.14	uncharacterized protein LOC111480009 [Cucurbita maxima]	[more]
KAG6581771.1	3.0e-69	79.89	Sm-like protein LSM1B, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh14G012220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72490.1	4.2e-16	29.10	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G17400.1	1.2e-10	36.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G19115.1	9.9e-10	30.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19115.2	9.9e-10	30.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19115.3	9.9e-10	30.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..186
None	No IPR available	PANTHER	PTHR34045:SF3	OS03G0406300 PROTEIN	coord: 85..185
None	No IPR available	PANTHER	PTHR34045:SF3	OS03G0406300 PROTEIN	coord: 3..69
IPR044683	LAZY family	PANTHER	PTHR34045	OS03G0406300 PROTEIN	coord: 3..69
IPR044683	LAZY family	PANTHER	PTHR34045	OS03G0406300 PROTEIN	coord: 85..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G012220.1	CmoCh14G012220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009630	gravitropism
biological_process	GO:0040008	regulation of growth