CmoCh14G011440 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGCGAGGAGAGAGAGAAAATCAGAAACAGCATCAGCGAATAAGACGATCGCCATAGCCATAGCCATAGCTCAGGCTTCAACAAGCTCACTCAACCACACATTCTCTCTAGTAATGCTGGGAAATTTCCACACCACAAACCCGATTATCCCGAGATTTTTTCTGGTCATCGAGGCTTCAAATTGATTATCACGATCGGAGCTGCAATTTCCTTTGAAGATCTGAGTTTCCTTCATCGGATAAACCTTCTTCTGTCGTTCATAAGCATCGTCCTCTCTCATTGTGAGTATTCCTCTTCTTCGGTTTTCTTTTCCTCCTTCTTCATCTTCGCTTTCATGCGCTCTCACTGTCTTTGATTTGGCGAGGGCGTGTTTTTCATCAGATCTTGTGATTAGAGATCGTTTCTTCCACTTCTGCAATCTCCTATGCGAGTTCTCCTCGAAGTTGAGAAAGGGAGACGTGGAAGAATCCGGATTAGCCTCGTTGTTCTCTAGCGTTATCGAATTCATTCTGTTTCCACAGTTGTCTCAATTGGAAATTTCCAAACGGATTTATGAATTTCTCGTTGTTTTCCCCTTCGCAGATATGGAGACGGAGGTCAGGAATCAGAATCAAAGTGGATGTAAGGCTCTGGAACCGGAGGTTTTCATACAGTGGGTAAAGAGGAAGCGACTGCGATGTGCTAGAATCAAAGACCCAGAAATCTCCGAGAGATTGTGCGGCGGCCTACGGAACAAAATCGGATCTCGGGGCGATCGCTGTGTGGTTTCTACTTCGGATAAAGAAAGGACCCCACTCCAACCAAATCGTTTAACTAGGTTAGAAATCGACGCTCAATACATGTTGTTTTCCACACTATTTGAAAGCAGATTAGAAAACAAAGGACGATTATGACTGAATTTTCTCGATTCATCACTTTACTTTGTGCTTTCCTGGGCTATGTATTTGTGTCGTTGGGTCTTCTTCTCCTCCCCCAGCTAGGAAAGAGGGCAATTCAAGAGAGGGTTTGGTGAAACAATTTTGTTTGCTGTTGGATCTGTTTGGTGGCAGGAATTCTGAAGGCGTTGCTACACTGCGTAACGGTGGTGCAGGCACAGCGCCGTCGCCAGAGAAGGAGGATCGTTACTACGCCACCAGAGGATCCACCGCAGCAGTGGTGGACGAGCACGGGCACGAGGAGAGAGGAGGTTGCTATGTTTGGCCAAAGCTGTTGATTGCTCTGTCAAGCAAAGAAAAGGAAGAGGACTTCATGGCCATGAAGGGGTGCAAGCTCCCAATAAGACCCAAAAAGAGAGCAAAGATGATTCAGAGAAGCTTACTCGTAAGCAACCGCCGCCACCACCACCACCACCACCACCTTCCTCCTTTTCTTTCTTTGTTTGTGGGTTAGTGATTGGGGGTTTGTTTGTGTCAGCTGGTGAGCCCTGGAGCCTGGCTGACTGAAATGAGCCAAGAGAGATATGAAGTAACGGAAAAGAAGACCACAAAGAAGGTAACACCAACTTGCTTGTTCTTTGAAAACCGTCTGGTAAATGGCTATGGCTATGACTTGGAACTTGAAAATGCTGTGTGGGTTTTGATTGCAGAGACCAACAGGGTTGAAAGCCATGGGAAGCATGGAAACTGA GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGCGAGGAGAGAGAGAAAATCAGAAACAGCATCAGCGAATAAGACGATCGCCATAGCCATAGCCATAGCTCAGGCTTCAACAAGCTCACTCAACCACACATTCTCTCTAGTAATGCTGGGAAATTTCCACACCACAAACCCGATTATCCCGAGATTTTTTCTGGTCATCGAGGCTTCAAATTGATTATCACGATCGGAGCTGCAATTTCCTTTGAAGATCTGAGTTTCCTTCATCGGATAAACCTTCTTCTGTCGTTCATAAGCATCGTCCTCTCTCATTATATGGAGACGGAGGTCAGGAATCAGAATCAAAGTGGATGTAAGGCTCTGGAACCGGAGGTTTTCATACAGTGGGTAAAGAGGAAGCGACTGCGATGTGCTAGAATCAAAGACCCAGAAATCTCCGAGAGATTGTGCGGCGGCCTACGGAACAAAATCGGATCTCGGGGCGATCGCTGTGTGGTTTCTACTTCGGATAAAGAAAGGACCCCACTCCAACCAAATCGTTTAACTAGGAATTCTGAAGGCGTTGCTACACTGCGTAACGGTGGTGCAGGCACAGCGCCGTCGCCAGAGAAGGAGGATCGTTACTACGCCACCAGAGGATCCACCGCAGCAGTGGTGGACGAGCACGGGCACGAGGAGAGAGGAGGTTGCTATGTTTGGCCAAAGCTGTTGATTGCTCTGTCAAGCAAAGAAAAGGAAGAGGACTTCATGGCCATGAAGGGGTGCAAGCTCCCAATAAGACCCAAAAAGAGAGCAAAGATGATTCAGAGAAGCTTACTCCTGGTGAGCCCTGGAGCCTGGCTGACTGAAATGAGCCAAGAGAGATATGAAGTAACGGAAAAGAAGACCACAAAGAAGGTAACACCAACTTGCTTGTTCTTTGAAAACCGTCTGGTAAATGGCTATGGCTATGACTTGGAACTTGAAAATGCTGTGTGGGTTTTGATTGCAGAGACCAACAGGGTTGAAAGCCATGGGAAGCATGGAAACTGA ATGGAGACGGAGGTCAGGAATCAGAATCAAAGTGGATGTAAGGCTCTGGAACCGGAGGTTTTCATACAGTGGGTAAAGAGGAAGCGACTGCGATGTGCTAGAATCAAAGACCCAGAAATCTCCGAGAGATTGTGCGGCGGCCTACGGAACAAAATCGGATCTCGGGGCGATCGCTGTGTGGTTTCTACTTCGGATAAAGAAAGGACCCCACTCCAACCAAATCGTTTAACTAGGAATTCTGAAGGCGTTGCTACACTGCGTAACGGTGGTGCAGGCACAGCGCCGTCGCCAGAGAAGGAGGATCGTTACTACGCCACCAGAGGATCCACCGCAGCAGTGGTGGACGAGCACGGGCACGAGGAGAGAGGAGGTTGCTATGTTTGGCCAAAGCTGTTGATTGCTCTGTCAAGCAAAGAAAAGGAAGAGGACTTCATGGCCATGAAGGGGTGCAAGCTCCCAATAAGACCCAAAAAGAGAGCAAAGATGATTCAGAGAAGCTTACTCCTGGTGAGCCCTGGAGCCTGGCTGACTGAAATGAGCCAAGAGAGATATGAAGTAACGGAAAAGAAGACCACAAAGAAGGTAACACCAACTTGCTTGTTCTTTGAAAACCGTCTGGTAAATGGCTATGGCTATGACTTGGAACTTGAAAATGCTGTGTGGGTTTTGATTGCAGAGACCAACAGGGTTGAAAGCCATGGGAAGCATGGAAACTGA METEVRNQNQSGCKALEPEVFIQWVKRKRLRCARIKDPEISERLCGGLRNKIGSRGDRCVVSTSDKERTPLQPNRLTRNSEGVATLRNGGAGTAPSPEKEDRYYATRGSTAAVVDEHGHEERGGCYVWPKLLIALSSKEKEEDFMAMKGCKLPIRPKKRAKMIQRSLLLVSPGAWLTEMSQERYEVTEKKTTKKVTPTCLFFENRLVNGYGYDLELENAVWVLIAETNRVESHGKHGN Homology
BLAST of CmoCh14G011440 vs. ExPASy TrEMBL
Match: A0A6J1F339 (uncharacterized protein LOC111439254 OS=Cucurbita moschata OX=3662 GN=LOC111439254 PE=4 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 7.3e-106 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of CmoCh14G011440 vs. ExPASy TrEMBL
Match: A0A6J1IAR3 (uncharacterized protein LOC111472840 OS=Cucurbita maxima OX=3661 GN=LOC111472840 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103 Identity = 191/194 (98.45%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of CmoCh14G011440 vs. ExPASy TrEMBL
Match: A0A0A0LFM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G843240 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.2e-92 Identity = 174/194 (89.69%), Postives = 180/194 (92.78%), Query Frame = 0
BLAST of CmoCh14G011440 vs. ExPASy TrEMBL
Match: A0A1S4E569 (uncharacterized protein LOC103502965 OS=Cucumis melo OX=3656 GN=LOC103502965 PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 7.9e-92 Identity = 173/194 (89.18%), Postives = 179/194 (92.27%), Query Frame = 0
BLAST of CmoCh14G011440 vs. ExPASy TrEMBL
Match: A0A5A7UCC4 (DUF1639 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G00040 PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 7.9e-92 Identity = 173/194 (89.18%), Postives = 179/194 (92.27%), Query Frame = 0
BLAST of CmoCh14G011440 vs. NCBI nr
Match: XP_022932795.1 (uncharacterized protein LOC111439254 [Cucurbita moschata]) HSP 1 Score: 393.3 bits (1009), Expect = 1.5e-105 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of CmoCh14G011440 vs. NCBI nr
Match: XP_023527898.1 (uncharacterized protein LOC111790980 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 388.3 bits (996), Expect = 4.9e-104 Identity = 192/194 (98.97%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of CmoCh14G011440 vs. NCBI nr
Match: KAG7018170.1 (hypothetical protein SDJN02_20038, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 388.3 bits (996), Expect = 4.9e-104 Identity = 192/194 (98.97%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of CmoCh14G011440 vs. NCBI nr
Match: XP_022974216.1 (uncharacterized protein LOC111472840 [Cucurbita maxima]) HSP 1 Score: 386.0 bits (990), Expect = 2.4e-103 Identity = 191/194 (98.45%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of CmoCh14G011440 vs. NCBI nr
Match: KAG6581680.1 (hypothetical protein SDJN03_21682, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 384.8 bits (987), Expect = 5.4e-103 Identity = 191/194 (98.45%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of CmoCh14G011440 vs. TAIR 10
Match: AT1G55340.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 151.8 bits (382), Expect = 7.2e-37 Identity = 91/196 (46.43%), Postives = 121/196 (61.73%), Query Frame = 0
BLAST of CmoCh14G011440 vs. TAIR 10
Match: AT3G03880.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 147.5 bits (371), Expect = 1.3e-35 Identity = 95/192 (49.48%), Postives = 117/192 (60.94%), Query Frame = 0
BLAST of CmoCh14G011440 vs. TAIR 10
Match: AT1G55340.2 (Protein of unknown function (DUF1639) ) HSP 1 Score: 147.1 bits (370), Expect = 1.8e-35 Identity = 89/196 (45.41%), Postives = 118/196 (60.20%), Query Frame = 0
BLAST of CmoCh14G011440 vs. TAIR 10
Match: AT4G20300.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 93.6 bits (231), Expect = 2.3e-19 Identity = 56/156 (35.90%), Postives = 84/156 (53.85%), Query Frame = 0
BLAST of CmoCh14G011440 vs. TAIR 10
Match: AT4G20300.2 (Protein of unknown function (DUF1639) ) HSP 1 Score: 91.7 bits (226), Expect = 8.8e-19 Identity = 55/155 (35.48%), Postives = 83/155 (53.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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