CmoCh14G010690 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G010690
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Phosphatidyl-N-methylethanolamine N-methyltransferase
Location	Cmo_Chr14: 5888091 .. 5891208 (+)
RNA-Seq Expression	CmoCh14G010690
Synteny	CmoCh14G010690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCGTACCAGTCAAAGGGGCTACTCTGCATCTTCTTCTTCCTGGGATCATTTTCCCGAGAAAGTGGAGAGAATATTCGGCGAGAAAACTATGAGAATGGGTATTTCGACAAAAATTGGAAATGGCTACCGATTCATGGCGTTCTGCAAGTTGCTTCACCTCCTCTCCATCTTCCACGTCTCCTACTTCTCAAGTTGCTTCTGGCCTCTCATCACCTTCCGAAAGTTCTTGAACTTCAGGTATCTCCTTCTCTCCCTCTCTCTCTGATGTGCTAGTCTGCTTCGAATGTAGCAATTTATTGGTGCATTTTGCTTGCTAAGCCATATCACAGTGTTCTACGCTGTTAAATCTCGAGGAAGTTAAATTTGGGCGTTTTGTAATTTACAACTATGTTTGTGTACCTGTGCGTGCGTATTTTTAGAATGAATTTAATGATTAAAGTTCCCTTAATAGCTTAAACTTATTGGATTGGGAGATATTTGCAGTGTGGAGATAATTGTTAGTTTGGGATGGCTTTTGAGCAGTTTAACGAAAGTAAAATGCATTTGAAGTGAAAGTTTTCTTATAGAATTTTCATGATCACTTTTGATTTTTTAGCCAAAAACAATGAAAAATTGTAGAAACTACATTTTACCCTTCCAAATTCAACCCGTTCTAATGTTGGAACCCTTGGCAATCTTTGGAGCTTTAGTTGAGTTTTCTTCTTTTTGAAAGAATGAATGGTTGCGTTGTACCAAAATGCAACTATCGGAGTGAAGCACTTGGTGGAGACCAGCCTGATCAAAAGTTTATAGAGTTCACAAAGAAAAACTATGTAATTAGGTAAACAAACAAAAGATTAAGATCTTATTTAGTTTTAGGACAGCCTCAAAGAAAGTATAAGGGTAACATTATCTGTTCTCCCAGGATCCATTTGCACCCAACCTTTCTTTTGGAACACTTTCCTGTTTCCAACACTGCCAATGAAACACAGAAAACAAGAGACTACTTTCATCAGTATGTAGGAAGCATTTCGAGCCTTTTTGCTTGTCATTCTTGGGCTCCTTACAATAGACTCTGTTCTGGACATGGGGATTCAATTTTAGAATGCACATTGAATACAAGGAAGATCCTGCAACAAGGGCAAGGCCTCAAAGTTAAATTTGTGAGAAAGTAATCTTGGAAGATCCAAACAATGAATCAATATGAGGACAGTGTGGGCTGCTTCGAGTATCCATTAGCCTGGTAATGACCCCAAGATCAAAACTCTTGAAAATTTCAATGTTATCTCGGTTTGAGCTATTATTTTGCTAATAATTTGAAGAACTACCAGGAGTAAGAGCTTTGCCACCTTTTTTCCTGAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAACTCTTGAAATTTTGGGTTCTCTTCATTATGATGCCAGCTCTTGTTCAAGTCTTCTGGAAACTTGAAATCTAGAAAATGAGTATACTTTCTTTACTTGTAATTCACTTTAACAGCTTAGTTGTTGAGATCGTTAAAAGCCAAGCAGGAACTTTATTCTTGTCAACCTTTTGAAATCCTGTGGATTGTGAATCTGAAATGAAATCCTGTGGATTCTGAAAGGGCTAAAAGGAATCCTAGTATATATTTTCAAGGCCATAACATATATACAGTTGAACGCTAGTGGATTCTTACTCATTGACAGAAAGACACGTCATGTTCTTCAATTCAAGATCTTGAAGATTTGTCTCTGACATTCAAATGTCAAAATTATTGTTAGATTTTATAACTGCACTGCTTGGTATGGTATTTAGTAGATGGGAATGAGAGAGGTATTGTTATAATTTCCCAAGATTACAGTCTGATCATTAAAAGGTAAGCCATGAGACTTTTCCTTTAAAGTTTTGGTTTGATTTTATCAAAACAAAGACAACTGAGGGAGGGGAGATCTAAGCTCAATAAATGGTTGGTTGTTCAAAGATTGTGGCTAAGATTTGGGTCTTCCTTTGGTTGGACAACTTTTTTTCTGTTGATGTTGGTTTTGTTGACTATGTTGGATGTTTGTCTCAGCCCAGTTTGGATGCTTTTGGGATGGTTCATTAGTTGTAGCTTCTTTTCACATTTTTTTAGTTTTAGTTCCATAAACAATATTATAAATTTGATCACTTTACAAAGTCTTTTCAGATTTTTTTAATTTGTTTTTTGGTAATTGATGTTAAAATTTTAAATTTTAAAATTTGGAAACTTATTTAGAACCATTTTAAAGCTATTCTAAGAAAAAAAAAAAAAAAAAAGTGGTAATTAAAGTTTAAAAATCACAATCAAGTTATTCAAAAAAAAACTTCCAAGATTCAATTAGACTTACAGTTTGTCAATTTAAGCAGGTTAAGACATCTATTATTAAACAAAAAGTATTCTTTCATCTCTTCTATTCATAATGTAATCAACTAAAAATAATTGAGAATACGTCGGCTAGCTTTAGTCTAAGATAAAACAATAGGTTCTCTTTTCAATCACACGTCACATTCAAATACATAGAAATTTACTAAAAGAAATTGACTTATAGAGGTCTCCGCCAAAGTTCAAATCTAGATTTCAAGCAAATTGTTCCATTTTAATAACTTTCAATTCAAATCTAGATTCAAGCAAATTATTCCATTTTAATAACTTTCTATTATCAGAAACTTACTAAAAGAAATTGACTTATAGAGGTCTGGGCCAAAGTTCGAATCTAGATACAAGCAAATTATTCCATTCTAATAACTTTTTATTTCCGAAAAAAATGAATTATAATATAAGAAATTGGAAAAAAAAAATTAATACAAATTGGAAAACTTATTTATTTATTTTTGAGTTGAACAAATAAGTTAGTAGATTTAAATGTGTGTTTTATTTTTAAAGATAGAAGATATAGTTTGTGAGGTTGGATCACAGAGAATACATATTCAAATTCATTGAATTGATTGAAGAATTTGGGCATTACAAATTGAAACAAGAATTTGGTGGGAGAATTTTTTGTGTTTCTTTCTTTTTCAAAAATCTCAGTACTATCTTCCCATCTCCAAAAATCGGTCAAATCTTCTCTTCTTCTGTGTGTATTTACAGATTAATCTCATGGAGAATTCGCCCCATTCTTAA

mRNA sequence

ATGGCCCGTACCAGTCAAAGGGGCTACTCTGCATCTTCTTCTTCCTGGGATCATTTTCCCGAGAAAGTGGAGAGAATATTCGGCGAGAAAACTATGAGAATGGGTATTTCGACAAAAATTGGAAATGGCTACCGATTCATGGCGTTCTGCAAGTTGCTTCACCTCCTCTCCATCTTCCACGTCTCCTACTTCTCAAGTTGCTTCTGGCCTCTCATCACCTTCCGAAAGTTCTTGAACTTCAGGATCCATTTGCACCCAACCTTTCTTTTGGAACACTTTCCTGTTTCCAACACTGCCAATGAAACACAGAAAACAAGAGACTACTTTCATCAGTATGTAGGAAGCATTTCGAGCCTTTTTGCTTGTCATTCTTGGGCTCCTTACAATAGACTCTGTTCTGGACATGGGGATTCAATTTTAGAATGCACATTGAATACAAGGAAGATCCTGCAACAAGGGCAAGGCCTCAAAGTTAAATTTTACTATCTTCCCATCTCCAAAAATCGGTCAAATCTTCTCTTCTTCTGTGTGTATTTACAGATTAATCTCATGGAGAATTCGCCCCATTCTTAA

Coding sequence (CDS)

ATGGCCCGTACCAGTCAAAGGGGCTACTCTGCATCTTCTTCTTCCTGGGATCATTTTCCCGAGAAAGTGGAGAGAATATTCGGCGAGAAAACTATGAGAATGGGTATTTCGACAAAAATTGGAAATGGCTACCGATTCATGGCGTTCTGCAAGTTGCTTCACCTCCTCTCCATCTTCCACGTCTCCTACTTCTCAAGTTGCTTCTGGCCTCTCATCACCTTCCGAAAGTTCTTGAACTTCAGGATCCATTTGCACCCAACCTTTCTTTTGGAACACTTTCCTGTTTCCAACACTGCCAATGAAACACAGAAAACAAGAGACTACTTTCATCAGTATGTAGGAAGCATTTCGAGCCTTTTTGCTTGTCATTCTTGGGCTCCTTACAATAGACTCTGTTCTGGACATGGGGATTCAATTTTAGAATGCACATTGAATACAAGGAAGATCCTGCAACAAGGGCAAGGCCTCAAAGTTAAATTTTACTATCTTCCCATCTCCAAAAATCGGTCAAATCTTCTCTTCTTCTGTGTGTATTTACAGATTAATCTCATGGAGAATTCGCCCCATTCTTAA

Protein sequence

MARTSQRGYSASSSSWDHFPEKVERIFGEKTMRMGISTKIGNGYRFMAFCKLLHLLSIFHVSYFSSCFWPLITFRKFLNFRIHLHPTFLLEHFPVSNTANETQKTRDYFHQYVGSISSLFACHSWAPYNRLCSGHGDSILECTLNTRKILQQGQGLKVKFYYLPISKNRSNLLFFCVYLQINLMENSPHS

Homology

[Close]

BLAST of CmoCh14G010690 vs. ExPASy Swiss-Prot
Match: Q9SAH5 (Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Arabidopsis thaliana OX=3702 GN=PLMT PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 8.1e-04
Identity = 34/87 (39.08%), Postives = 43/87 (49.43%), Query Frame = 0


Query: 51  KLLHLLSIFHVSYFS----SCFWPLITFRKFLNFRIHLHPTFLLEHFPVSNTANETQKTR 110
           K   LLS+F V+  S      FWPL+ F +FLNFR++        ++ V    N    T 
Sbjct: 48  KAAQLLSLFSVASLSWPPPLYFWPLMAFGQFLNFRVYQLLGEAGTYYGVRFGKNIPWVTE 107

Query: 111 DYF-----HQYVGSISSLFACHSWAPY 129
             F      QYVGSI SL AC SW P+
Sbjct: 108 FPFGVIRDPQYVGSIMSLLACLSWVPF 134

[Close]

BLAST of CmoCh14G010690 vs. ExPASy TrEMBL
Match: A0A6P3Z624 (Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Ziziphus jujuba OX=326968 GN=LOC107407694 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.8e-04
Identity = 39/87 (44.83%), Postives = 47/87 (54.02%), Query Frame = 0


Query: 51  KLLHLLSIFHVSYFS----SCFWPLITFRKFLNFRIHLHPTFLLEHFPVSNTANETQKTR 110
           KL+ LLS+F VS FS      FWPLI F +FLNFR++        ++ V    N    T 
Sbjct: 48  KLIQLLSLFSVSTFSWPPPLYFWPLIAFGQFLNFRVYQLLGESGTYYGVRFGKNIPWVTE 107

Query: 111 DYF-----HQYVGSISSLFACHSWAPY 129
             F      QYVGSI SLFAC SW P+
Sbjct: 108 FPFGYIQDPQYVGSIMSLFACLSWVPF 134

[Close]

BLAST of CmoCh14G010690 vs. ExPASy TrEMBL
Match: A0A1S3CPQ5 (phosphatidyl-N-methylethanolamine N-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103502819 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.9e-04
Identity = 40/88 (45.45%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 49  FCKLLHLLSIFHVSYFS----SCFWPLITFRKFLNFRIHLHPTFLLEHFPVSNTANETQK 108
           F KLL  LSI HVS FS      FWPL+ F +FLNFR++        ++ V    N    
Sbjct: 46  FLKLLQFLSIIHVSSFSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKNIPWV 105

Query: 109 TRDYF-----HQYVGSISSLFACHSWAP 128
           T   F      QYVGSI SLFAC SW P
Sbjct: 106 TEFPFGYIKDPQYVGSILSLFACLSWVP 133

[Close]

BLAST of CmoCh14G010690 vs. ExPASy TrEMBL
Match: A0A6J1DHC8 (phosphatidyl-N-methylethanolamine N-methyltransferase OS=Momordica charantia OX=3673 GN=LOC111020909 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 6.5e-04
Identity = 40/92 (43.48%), Postives = 47/92 (51.09%), Query Frame = 0


Query: 45  RFMAFCKLLHLLSIFHVSYFS----SCFWPLITFRKFLNFRIHLHPTFLLEHFPVSNTAN 104
           R   F KLL  LSI HVS FS      FWPL+ F +FLNFR++        ++ V    N
Sbjct: 42  RVSIFLKLLQFLSILHVSSFSWPPPLYFWPLMAFGQFLNFRVYQLLGESGVYYGVRFGKN 101

Query: 105 ETQKTRDYF-----HQYVGSISSLFACHSWAP 128
               T   F      QYVGSI S+FAC SW P
Sbjct: 102 IPWVTEFPFGYIRDPQYVGSILSIFACLSWVP 133

[Close]

BLAST of CmoCh14G010690 vs. ExPASy TrEMBL
Match: A0A540MA33 (Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Malus baccata OX=106549 GN=C1H46_018753 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 6.5e-04
Identity = 39/89 (43.82%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 49  FCKLLHLLSIFHVSYFS----SCFWPLITFRKFLNFRIHLHPTFLLEHFPVSNTANETQK 108
           F KL+  LS+F VS FS      FWPLI F +FLNFR++        ++ V    N    
Sbjct: 46  FLKLIQFLSLFSVSTFSWPPPLYFWPLIAFGQFLNFRVYQLLGESGTYYGVRFGKNIPWV 105

Query: 109 TRDYF-----HQYVGSISSLFACHSWAPY 129
           T   F      QYVGSI SLFAC SW P+
Sbjct: 106 TEFPFGYVKDPQYVGSILSLFACVSWVPF 134

[Close]

BLAST of CmoCh14G010690 vs. TAIR 10
Match: AT1G80860.2 (phospholipid N-methyltransferase )

HSP 1 Score: 45.4 bits (106), Expect = 5.8e-05
Identity = 34/87 (39.08%), Postives = 43/87 (49.43%), Query Frame = 0


Query: 51  KLLHLLSIFHVSYFS----SCFWPLITFRKFLNFRIHLHPTFLLEHFPVSNTANETQKTR 110
           K   LLS+F V+  S      FWPL+ F +FLNFR++        ++ V    N    T 
Sbjct: 48  KAAQLLSLFSVASLSWPPPLYFWPLMAFGQFLNFRVYQLLGEAGTYYGVRFGKNIPWVTE 107

Query: 111 DYF-----HQYVGSISSLFACHSWAPY 129
             F      QYVGSI SL AC SW P+
Sbjct: 108 FPFGVIRDPQYVGSIMSLLACLSWVPF 134

[Close]

BLAST of CmoCh14G010690 vs. TAIR 10
Match: AT1G80860.1 (phospholipid N-methyltransferase )

HSP 1 Score: 45.4 bits (106), Expect = 5.8e-05
Identity = 34/87 (39.08%), Postives = 43/87 (49.43%), Query Frame = 0


Query: 51  KLLHLLSIFHVSYFS----SCFWPLITFRKFLNFRIHLHPTFLLEHFPVSNTANETQKTR 110
           K   LLS+F V+  S      FWPL+ F +FLNFR++        ++ V    N    T 
Sbjct: 48  KAAQLLSLFSVASLSWPPPLYFWPLMAFGQFLNFRVYQLLGEAGTYYGVRFGKNIPWVTE 107

Query: 111 DYF-----HQYVGSISSLFACHSWAPY 129
             F      QYVGSI SL AC SW P+
Sbjct: 108 FPFGVIRDPQYVGSIMSLLACLSWVPF 134

The following BLAST results are available for this feature:

BLAST of CmoCh14G010690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAH5	8.1e-04	39.08	Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Arabidopsis thaliana OX...	[more]

BLAST of CmoCh14G010690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P3Z624	3.8e-04	44.83	Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Ziziphus jujuba OX=3269...	[more]
A0A1S3CPQ5	4.9e-04	45.45	phosphatidyl-N-methylethanolamine N-methyltransferase OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1DHC8	6.5e-04	43.48	phosphatidyl-N-methylethanolamine N-methyltransferase OS=Momordica charantia OX=...	[more]
A0A540MA33	6.5e-04	43.82	Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Malus baccata OX=106549...	[more]

BLAST of CmoCh14G010690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80860.2	5.8e-05	39.08	phospholipid N-methyltransferase	[more]
AT1G80860.1	5.8e-05	39.08	phospholipid N-methyltransferase	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G010690.1	CmoCh14G010690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008168	methyltransferase activity