CmoCh14G009520 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G009520
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	GTP-binding protein SAR1A
Location	Cmo_Chr14: 5080545 .. 5083206 (-)
RNA-Seq Expression	CmoCh14G009520
Synteny	CmoCh14G009520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCTCATTGACTGGTTCTACGGCGTCTTGGCCTCCCTTGGTCTTTGGCAGAAGGAGGCCAAAATCCTGTTCCTTGGCCTCGACAATGCCGGAAAAACCACCCTGCTTCATATGTTGAAAGACGAGGTTTGATTTCTTCGATTTCAGTCTCGCGAATTGGGGGAAACTCTGTGTTTTATTTGTTAAACGCGGGGGATTTTGGATTTGGCTGAGGAAATGAAATAGTTGGAGATTTTGATTTGTTTCTCATGGCGTGTCTTGGTTATTGTTCTTCGTTTGATTTTCTTGTTCTAGAGGTTAGTTCAGCACCAGCCTACACAGTACCCGACGTCCGAGGAGTTGAGTATTGGAAAAATCAAATTCAAGGCCTTTGATTTAGGTGGACATCAAATCGCTCGTAGAGTCTGGAAGGATTATTATGCTAAGGTAACAAAACTCCAGTTCTTCTGGAATTCGAGCTTATTGTATTTCCATTTTCAGTTGTTTACTTTGCTTTTGTGGTGATTTTCTTGGGCATTTGGTTCTGTTGAGGAGCACTCTCACATCAAATGAAGAACTATCGTTTAATTCCAAGCTGATAGTCAGTTTGGTATCCTTTGATTTCCATGAATTTAGGTATTTGACATGTCCACGATGAAAGAAGAATGACACTAGTTCCTTCTTGAGCTGCATAATACACGTTCAGTTGTTTTTCTTACTTCTTGATGTGTGATACTCAACTTATCATTAATTTGTATCAGTCTCTTGTTATCAACAATTTGCTCACCTGCTCTTAGCATTTAAAGATCACATTTAATAGTAATTGCTTTGCAGGGGAATGATCTTCCCCATAGTTTAGAGTAAGCATTGAAAAGAAACTATATATGATATACCGAGCCCTGCTTCTGAATCTTTGAAACACAGTGATTTTCCCCAATTTGAAATGAAAAATGATATTATCACAGGTAGATGCTGTTGTGTACCTGGTGGACGCCTTTGACAAAGACAGATTTGCAGAATCAAAGAAGGAGCTCGATGCCCTTCTCTCTGATGAGTCTCTTGCTAACGTGCCATTCCTGATATTGGGCAACAAGATTGACATTCCATACGCTGCATCAGAGGAAGAATTGCGGTACCATCTCGGATTGACGAGCTTCACCACAGGGAAGGGAAAGGTAAATCTGGCTGATTCGGATGTTCGAGCATTAGAGGTATTCATGTGCAGTATTGTTCGGAAGATGGGTTATGGTGATGGCTTCAAGTGGATGTCTCAATATATCAAGTAGTAGGTGAGATTGACAATGGTATGTGATACAGTTTCGTGAATTGATGAAATCCCACTGTCCGAAGCCCCTCCGAGAGGTCAACGTAGCGATTGGAGTTTGATATTGAGTGTGTGTTAGAGGGAGGAGGGGGTTTGAGTTGAACTTTTCTTTTTTGTTTTGCTTTCAGATGATGTGTGGATGGAGGGAGGAGGTATACTCGTGGCTTATTATGTAAAATTCAGTTCCTACCTCAAAGTTTATTGTTCTTGACATTTTCATCTCTTGTTCTTGTTCATCTGACTCGGTTAGGATCTGCTTTTCTTCTAATTCTTGTTTATCAGCACCAGTTCTAAGTGGAAGGTCTGATAAAGTAAAAACTTGGACTACAGGAGGGGCATACATGAAAATTAAATTAGAAGCTTTTAGGCGCAGACACCAGTTCTAACCGCCCCACATCCCTTCTTAAGCGCCATTCTCACACCCTTCGTCATGCAACATCTCCTTGCTCACATTATGCAAGTTCCATACATATGCGAGGGAGAGAAAGATCAAGAGAAACAGAGAGATAGGATGCTTACCGACGTATCTCATCTTGGCAGGTGTTGGGGGTGTGTCCTGCTCCCAGCCGTTCCTCAGTGTTGCACGTGTTGGGGGTGTGTCCTGCTCCCGAAGTTTGTGCCTCGACTCGAGTAACGACGCGCGTTCCTCAGTGTTGCACGTGTTGGGGGTGTGTCCTGCTCCCAGCCGTGACTCATCTTGGCAGTTCATCTCGACTCAACTGGCGGCTCAGTGTCGACTCAATTTGGCACCTTAGACGGCCTTATATACCTGTTTTATACCGCTTCCTAAGTTTCAACCCTCTCGCAACCATTTTTGACCTTATGGAGGCTACTGTAAGATTCATTTTTACTCCAACTAAATAATTTTGGTCAAACTAATCTAGGTATTTTTATGGCCCAATTGACAGCCCATTATATCCTGTTTTTCTTTCATGTTTTTAGGTGGAAAACTTCCCGTGACGACAATGGGCCTGGGGCCTGGCCCATCTTATCCAGGAAGAACCTACAGATTCGACAATGGGCCTGAGGCCTGGCCCATCTTATCCAGGAAGAACCTACAGATTCGACAATGGCCCCGTCGTTTACCCAATGGGGGAACATGGAATTCATATTGGTGACGTTAGGCATTCAGTGTCTCTACAGGCTCAGACATTGGGGATTATCAAATCTTGAATGGGAAATGTGACAGATTTGCCCCTCATGTGAATTTTGTAATGCCGGATTTGTCCTTCCCGGGATGGGTTTATTGTTGTGTTGGGGGCAAAATTGGGATATTATAAACTCTAAAATTTATTGCAACAAAGTATTATAAAGCAATGGCTGTTGTTTTAAATCACATCAGTAAACAGAATGAAA

mRNA sequence

ATGTTCCTCATTGACTGGTTCTACGGCGTCTTGGCCTCCCTTGGTCTTTGGCAGAAGGAGGCCAAAATCCTGTTCCTTGGCCTCGACAATGCCGGAAAAACCACCCTGCTTCATATGTTGAAAGACGAGAGGTTAGTTCAGCACCAGCCTACACAGTACCCGACGTCCGAGGAGTTGAGTATTGGAAAAATCAAATTCAAGGCCTTTGATTTAGGTGGACATCAAATCGCTCGTAGAGTCTGGAAGGATTATTATGCTAAGGTAGATGCTGTTGTGTACCTGGTGGACGCCTTTGACAAAGACAGATTTGCAGAATCAAAGAAGGAGCTCGATGCCCTTCTCTCTGATGAGTCTCTTGCTAACGTGCCATTCCTGATATTGGGCAACAAGATTGACATTCCATACGCTGCATCAGAGGAAGAATTGCGGTACCATCTCGGATTGACGAGCTTCACCACAGGGAAGGGAAAGATGATGTGTGGATGGAGGGAGGAGGCGCAGACACCAGTTCTAACCGCCCCACATCCCTTCTTAAGCGCCATTCTCACACCCTTCGTCATGCAACATCTCCTTGCTCACATTATGCAAGTTCCATACATATGCGAGGGAGAGAAAGATCAAGAGAAACAGAGAGATAGGATGCTTACCGACGTATCTCATCTTGGCAGGTGGAAAACTTCCCGTGACGACAATGGGCCTGGGGCCTGGCCCATCTTATCCAGGAAGAACCTACAGATTCGACAATGGGCCTGAGGCCTGGCCCATCTTATCCAGGAAGAACCTACAGATTCGACAATGGCCCCGTCGTTTACCCAATGGGGGAACATGGAATTCATATTGGTGACGTTAGGCATTCAGTGTCTCTACAGGCTCAGACATTGGGGATTATCAAATCTTGAATGGGAAATGTGACAGATTTGCCCCTCATGTGAATTTTGTAATGCCGGATTTGTCCTTCCCGGGATGGGTTTATTGTTGTGTTGGGGGCAAAATTGGGATATTATAAACTCTAAAATTTATTGCAACAAAGTATTATAAAGCAATGGCTGTTGTTTTAAATCACATCAGTAAACAGAATGAAA

Coding sequence (CDS)

ATGTTCCTCATTGACTGGTTCTACGGCGTCTTGGCCTCCCTTGGTCTTTGGCAGAAGGAGGCCAAAATCCTGTTCCTTGGCCTCGACAATGCCGGAAAAACCACCCTGCTTCATATGTTGAAAGACGAGAGGTTAGTTCAGCACCAGCCTACACAGTACCCGACGTCCGAGGAGTTGAGTATTGGAAAAATCAAATTCAAGGCCTTTGATTTAGGTGGACATCAAATCGCTCGTAGAGTCTGGAAGGATTATTATGCTAAGGTAGATGCTGTTGTGTACCTGGTGGACGCCTTTGACAAAGACAGATTTGCAGAATCAAAGAAGGAGCTCGATGCCCTTCTCTCTGATGAGTCTCTTGCTAACGTGCCATTCCTGATATTGGGCAACAAGATTGACATTCCATACGCTGCATCAGAGGAAGAATTGCGGTACCATCTCGGATTGACGAGCTTCACCACAGGGAAGGGAAAGATGATGTGTGGATGGAGGGAGGAGGCGCAGACACCAGTTCTAACCGCCCCACATCCCTTCTTAAGCGCCATTCTCACACCCTTCGTCATGCAACATCTCCTTGCTCACATTATGCAAGTTCCATACATATGCGAGGGAGAGAAAGATCAAGAGAAACAGAGAGATAGGATGCTTACCGACGTATCTCATCTTGGCAGGTGGAAAACTTCCCGTGACGACAATGGGCCTGGGGCCTGGCCCATCTTATCCAGGAAGAACCTACAGATTCGACAATGGGCCTGA

Protein sequence

MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLANVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKMMCGWREEAQTPVLTAPHPFLSAILTPFVMQHLLAHIMQVPYICEGEKDQEKQRDRMLTDVSHLGRWKTSRDDNGPGAWPILSRKNLQIRQWA

Homology

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BLAST of CmoCh14G009520 vs. ExPASy Swiss-Prot
Match: O04834 (GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 6.8e-83
Identity = 149/158 (94.30%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MF+IDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFMIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DK+RFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKM 159
           +VPFLILGNKIDIPYAASE+ELRYHLGL++FTTGKGK+
Sbjct: 121 SVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKV 158

[Close]

BLAST of CmoCh14G009520 vs. ExPASy Swiss-Prot
Match: Q01474 (GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 8.8e-83
Identity = 148/161 (91.93%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DK+RFAESK+ELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALA 120

Query: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKMMCG 162
            VPFLILGNKIDIPYAASE+ELRYHLGLT+FTTGKGK+  G
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLG 161

[Close]

BLAST of CmoCh14G009520 vs. ExPASy Swiss-Prot
Match: O04266 (GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.2e-82
Identity = 149/158 (94.30%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MF+IDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFVIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DK+RFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKM 159
            VPFLILGNKIDIPYAASE+ELRYHLGL++FTTGKGK+
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKV 158

[Close]

BLAST of CmoCh14G009520 vs. ExPASy Swiss-Prot
Match: O04267 (GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 2.2e-81
Identity = 146/170 (85.88%), Postives = 158/170 (92.94%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DK+RF+ESKKELDALLSD++LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALA 120

Query: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKMMCGWREEAQTPV 171
            VPFLILGNKID PYAASE+ELRYHLGLT+FTTGKGK+     +    P+
Sbjct: 121 TVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTAGGDSGVRPL 170

[Close]

BLAST of CmoCh14G009520 vs. ExPASy Swiss-Prot
Match: P52884 (GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 5.9e-79
Identity = 142/158 (89.87%), Postives = 150/158 (94.94%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL+DWFYGVLASLGLWQK+AKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120
           IG IKFKAFDLGGHQIARRVW+DYYAKVDAVVYLVDA D++RF E+KKELD LLSDESL 
Sbjct: 61  IGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLT 120

Query: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKM 159
           NVPFLILGNKIDIPYAASE+ELRYHLGLT  TTGKG +
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNI 158

[Close]

BLAST of CmoCh14G009520 vs. ExPASy TrEMBL
Match: A0A6J1F9E4 (GTP-binding protein SAR1A-like OS=Cucurbita moschata OX=3662 GN=LOC111442028 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 1.1e-83
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKM 159
           NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGK+
Sbjct: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKV 158

[Close]

BLAST of CmoCh14G009520 vs. ExPASy TrEMBL
Match: A0A6J1J150 (GTP-binding protein SAR1A-like OS=Cucurbita maxima OX=3661 GN=LOC111482493 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.4e-83
Identity = 156/158 (98.73%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKM 159
           NVPFLILGNKIDIPYAASEEELRYHLGLT+FTTGKGK+
Sbjct: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTNFTTGKGKV 158

[Close]

BLAST of CmoCh14G009520 vs. ExPASy TrEMBL
Match: A0A6J1K7F7 (GTP-binding protein SAR1A OS=Cucurbita maxima OX=3661 GN=LOC111492948 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.6e-82
Identity = 154/158 (97.47%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDK+RFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKM 159
           NVPFLILGNKIDIPYAASE+ELRYHLGLT+FTTGKGK+
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKV 158

[Close]

BLAST of CmoCh14G009520 vs. ExPASy TrEMBL
Match: A0A6J1GBP2 (GTP-binding protein SAR1A OS=Cucurbita moschata OX=3662 GN=LOC111452707 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.6e-82
Identity = 154/158 (97.47%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDK+RFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKM 159
           NVPFLILGNKIDIPYAASE+ELRYHLGLT+FTTGKGK+
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKV 158

[Close]

BLAST of CmoCh14G009520 vs. ExPASy TrEMBL
Match: A0A6A5P555 (Putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside triphosphate hydrolase OS=Lupinus albus OX=3870 GN=Lal_00036371 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.7e-82
Identity = 153/158 (96.84%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL+DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYA+VDAVVYLVDAFDK+RFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAQVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKM 159
           NVPFLILGNKIDIPYAASEEELRYHLGLT+FTTGKGK+
Sbjct: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTNFTTGKGKV 158

[Close]

BLAST of CmoCh14G009520 vs. TAIR 10
Match: AT3G62560.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 312.4 bits (799), Expect = 3.3e-85
Identity = 151/158 (95.57%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL+DWFYGVLA+LGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFLVDWFYGVLATLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DK+RFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKM 159
           NVPFLILGNKIDIPYAASE+ELRYHLGLTSFTTGKGK+
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTSFTTGKGKV 158

[Close]

BLAST of CmoCh14G009520 vs. TAIR 10
Match: AT4G02080.1 (secretion-associated RAS super family 2 )

HSP 1 Score: 308.5 bits (789), Expect = 4.8e-84
Identity = 149/158 (94.30%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MF+IDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFMIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DK+RFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKM 159
           +VPFLILGNKIDIPYAASE+ELRYHLGL++FTTGKGK+
Sbjct: 121 SVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKV 158

[Close]

BLAST of CmoCh14G009520 vs. TAIR 10
Match: AT1G56330.1 (secretion-associated RAS 1B )

HSP 1 Score: 308.1 bits (788), Expect = 6.3e-84
Identity = 148/161 (91.93%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DK+RFAESK+ELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALA 120

Query: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKGKMMCG 162
            VPFLILGNKIDIPYAASE+ELRYHLGLT+FTTGKGK+  G
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLG 161

[Close]

BLAST of CmoCh14G009520 vs. TAIR 10
Match: AT1G09180.1 (secretion-associated RAS super family 1 )

HSP 1 Score: 286.6 bits (732), Expect = 2.0e-77
Identity = 139/156 (89.10%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL DWFYG+LASLGL +KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLA 120
           IGKI FKAFDLGGHQIARRVWKD YAKVDAVVYLVDA+D+DRF ESK+ELDALLSDE+LA
Sbjct: 61  IGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALA 120

Query: 121 NVPFLILGNKIDIPYAASEEELRYHLGLTSFTTGKG 157
           NVP LILGNKIDIPYA+SE+ELRY+LGLT+FTTGKG
Sbjct: 121 NVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKG 156

[Close]

BLAST of CmoCh14G009520 vs. TAIR 10
Match: AT1G02620.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-30
Identity = 61/76 (80.26%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 83  DYYAKVDAVVYLVDAFDKDRFAESKKELDALLSDESLANVPFLILGNKIDIPYAASEEEL 142
           +++++VDA+VYLVDA+D++RFAESKKELDALLSDESLA VPFLILGNKIDIPYAASE+EL
Sbjct: 12  EWFSQVDALVYLVDAYDQERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDEL 71

Query: 143 RYHLGLTSFTTGKGKM 159
           R+HLGL++FTTGKGK+
Sbjct: 72  RFHLGLSNFTTGKGKV 87

The following BLAST results are available for this feature:

BLAST of CmoCh14G009520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04834	6.8e-83	94.30	GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1	[more]
Q01474	8.8e-83	91.93	GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1	[more]
O04266	1.2e-82	94.30	GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1	[more]
O04267	2.2e-81	85.88	GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1	[more]
P52884	5.9e-79	89.87	GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1	[more]

BLAST of CmoCh14G009520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9E4	1.1e-83	99.37	GTP-binding protein SAR1A-like OS=Cucurbita moschata OX=3662 GN=LOC111442028 PE=...	[more]
A0A6J1J150	2.4e-83	98.73	GTP-binding protein SAR1A-like OS=Cucurbita maxima OX=3661 GN=LOC111482493 PE=3 ...	[more]
A0A6J1K7F7	1.6e-82	97.47	GTP-binding protein SAR1A OS=Cucurbita maxima OX=3661 GN=LOC111492948 PE=3 SV=1	[more]
A0A6J1GBP2	1.6e-82	97.47	GTP-binding protein SAR1A OS=Cucurbita moschata OX=3662 GN=LOC111452707 PE=3 SV=...	[more]
A0A6A5P555	2.7e-82	96.84	Putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside tr...	[more]

BLAST of CmoCh14G009520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62560.1	3.3e-85	95.57	Ras-related small GTP-binding family protein	[more]
AT4G02080.1	4.8e-84	94.30	secretion-associated RAS super family 2	[more]
AT1G56330.1	6.3e-84	91.93	secretion-associated RAS 1B	[more]
AT1G09180.1	2.0e-77	89.10	secretion-associated RAS super family 1	[more]
AT1G02620.1	1.4e-30	80.26	Ras-related small GTP-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 122..143 score: 87.43 coord: 77..102 score: 78.96 coord: 22..45 score: 94.61 coord: 50..74 score: 86.12
IPR006689	Small GTPase superfamily, ARF/SAR type	SMART	SM00178	sar_sub_1	coord: 4..200 e-value: 9.5E-104 score: 360.6
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 8..152 e-value: 8.1E-57 score: 191.5
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 4..186 e-value: 3.8E-17 score: 73.0
None	No IPR available	PANTHER	PTHR45684:SF32	PROTEIN SAR1A, PUTATIVE, EXPRESSED-RELATED	coord: 1..160
None	No IPR available	PROSITE	PS51422	SAR1	coord: 14..221 score: 24.622765
None	No IPR available	PROSITE	PS51417	ARF	coord: 14..194 score: 14.455849
None	No IPR available	CDD	cd00879	Sar1	coord: 2..157 e-value: 3.84003E-106 score: 303.045
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..173 e-value: 3.3E-61 score: 207.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 17..183
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 19..137 e-value: 3.5E-15 score: 54.1
IPR006687	Small GTPase superfamily, SAR1-type	PANTHER	PTHR45684	RE74312P	coord: 1..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G009520.1	CmoCh14G009520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070863	positive regulation of protein exit from endoplasmic reticulum
biological_process	GO:0003400	regulation of COPII vesicle coating
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030127	COPII vesicle coat
cellular_component	GO:0070971	endoplasmic reticulum exit site
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding