CmoCh14G006110 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G006110
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	FACT complex subunit SSRP1
Location	Cmo_Chr14: 3089146 .. 3095973 (-)
RNA-Seq Expression	CmoCh14G006110
Synteny	CmoCh14G006110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGGACTCCGATTTTCCTCTCAAAACGATATAAAGCAAACCCTTCTTCTCGCGTTTCTTCTTCTGCGATTCGCTTCCTTGGTGTAGGTCTCAGTTTCCGGCCATGGCTGACGGTCAGCTCTACAGCAATATCTCTCTCGGCGGCCGTGGAGGCACTGTGAGTTCTCGTTCTGTGTGTGTGTGTGTGCCGCTGGCAACTTACTAGGTTTATTGGTGGAGTTGGATCGTTGTATTTAGTGTGGGCATGGAGATGCGGTTGTGCTTTTCAACCCTAAGTTTTGAACTCTTCCTAGATTTTGTATGATGGTGATTTGATATTTCGAAAGGAAAAGTGAAGGGCGATTATTTTTTTTGTTTATTTTCTCCGCTGTTTGTGTCTTTCTGTACCTCCTCGTGGCGCCGCGGAAGGGAGGTGGTGTTCAAATAGCTAGAATAGTTATTAATTTTCAATAGAATTGGAGATTTTGTTCCGGCATAATTAGGGAATGCTGGTAACTTATTACCTGTACATATTCTTGAAATTCCCAAATTTCATAAATGTGATGGGTTGTTATTGTTTCCGAGTGTCATCTGTTGGGAGCGTGAGGGTAAAGTGTTATATTTTGAACTCTGTAATTGTTTGTCCTCGACATCTCACTTGTTGCATTAACTGAAGTACTTCGTATTGGAGGATACTCAACTTGAATGAAGGGAAAGAAATGATCTTTAATAGTTACAATTTTCTGATTTTTCTTTCGGGGGCTTCTGTGAAAGTTTGGAATGATGAAAATGGACCCTTATAATTCTCCTCCATGTATATGTTTCAATGCAGAACCCTGGTCAGCTTAAGACAGATCAAAGAGGTATTCTGTGGAAGAAGCAAGGAGGTGGAAAGGCAGTTGAATTGGATAAAGCAGACATTGTTGGTGTAACATGGATGAAGGTCCCAAGGACAAACCAGTTAGGAATTCGGGTCAAAGATGGATTGTATTACAAGTTCACTGGATTCCGTGATCAGGTTTCCTGAATTTTATAGAATGATATTACTTCTATATTTATCGATTGACGTTAGAATTTTGCTATGCACCTCATGGTGTTAGCTCACTTAATGTTGGTCCATGTCATTGCCCCCAGTTTTCACTTAACCATTGCCTTTAGTTAGTGGATTAGCTAGTTTTGTTGGCCCATGCCATCTGATCACAACAGTAGCTCGAAATGAGATGATTACAAATTACTCTTTCATGATTGTTTTTATTTAATAGATGCAGTTAGATTGTGCGAATTTTTTTTGTTAATGTAGGACATCAGTAGTTTAACAAAATTTTTCCAAAGTAATTGTGGAATAGCACCAGAGGAAAAGCAGCTTTCTGTCAGTGGCCGTAATTGGGGTGAAGTTGACTTGAATGGTAAGCTGTTCTGATGCATTTAGTCTATCACGTGTTGTGCTTGTAGTCTTTACTTGTGAATTTCTTGTGGTAATCCATTTTGTATTCAAAGAACTTGTGCTTCATTTGTATGTATAGAAATGCTACTTTGGTGCTCTAAGAAAAGACTAAATGGCTCAAAAAATCATCAATCTTGGTTTAGGAATTACACCATAGTGGCACTTAGCTCTAGCTTACATTTCCTTGGTTTTCTGGATTTCTAGTCTGATCTGTGATGCAAATCAAATGTAAGTCATTTCTCTGCAAATGTGATTGTTGAGGTTGAATCTATTTTTTTAAAAAAGATACTCTGCACTGGCATGTGCAATAATAATTTCCTTCCATTATTTTATAAGATTGTCGAGCATTCTATGTCTCTCTCTCTCTCTCTCTAATATCAGATAATTGATCCTTCCTAAATTTCTTTAGTACTGAAATACATCTATAGGAAAGGTGTCTTCCTTTAATTACTTTATACCTTATGGTGTAGGGAATATGCTTACTTTCTTGGTTGGTTCAAAGCAAGCATTTGAGGTGTCTCTAGCTGATGTTGCTCAAACACAGCTTCAAGGGAAGAACGATGTTATGCTAGAGTTTCATGTGGATGATACAACAGGAGCTAATGAGGTCATTCTTTTATGTTTTCTCTTTGTTTTAAAATAGTTTGTGTTAGTTGCTTACCAATTGATGAGCAATGTGGCACTAATATCTTGAACTGCATAGATTTTGTTTTGGATTGCTTTATTGTAATCTAATATTTTTAACATTATGATCACAGAAAGATTCTCTAATGGAGATAAGTTTTCACATACCAAATACCAATACTCAATTTGTTGGTGATGAAAGTCACCCTCCCGCTCAGGTAGAATCATATATCTGATCGATTCATTCTACAATGTGTATTTTTTTTTTGTGACATTTTATGAAGTATAGTTTGATTAAGGTTTTCCGCGACAAAATTATGTCCATGGCGGATGTTAGTGCGGGCATTGAGGAAGCTGTGGTCACATTTGAGGGCATTGCTATCCTCACTCCAAGGTAGACGGTCTGAGTGTTGCTTTTCATGTGACTGCACATGCCTAGTATCATAGCATGCACATGTTTCTATCTAATTTGCTTGCATCGTTCCTTTTGTTTCTTTTAATGCTGGCACAACTTTTTCTTCTGTCTTAAAGTATTCTAATGTGGTTATTTTTGTTGTATAGGGGTCGGTACAGTGTAGAACTCCACCTTTCGTTCCTGCGGCTCCAAGGACAAGCCAATGATTTCAAAATACAATACAGCAGCGTTGTTCGCCTTTTCTTACTTCCAAAGGTTTTTCTTCTTGACTTCTATTGACCATAGATGTTACACTATTTAGACCAGTCAGTCAATAAGATTTGAAGTCTTATGTGCATGTGATGTTTTGTGCAGTCCAATCAGCCACATACTTTTGTTGTAGTGACTTTAGATCCACCAATTCGTAAAGGCCAAACTTTGTACCCTCATATTGTTCTGCAGGTATTTGTTAAGTTTCTTTACATGTTTTCTTTTCTTTCTATTTTTTTTTTAAAATGAATTCTCTTCAAGGATCACCTTTTGTTCTTATGCATCTTTGCAGTTTGAGACTGACTTTGTGGTTCAAAGCACCCTGCAAATAGGCGATGAACTTTTCAACACAAAGTACAAGGACAAGTTAGAACCTTCTTATAAGGTAGAAAAGTGCTTCTCCCTCCAAAGAATAGAATTTCTTTACTATTAGATCGAAGAAACAAAGAATACAGACATGACTCAAGCACAAACGAAGTGGCATATTAATTTTATAAAATCTAGGACATGGGTACGATAAAGACACAATTTTACCACACACGTTTTTTTTGTTTTTTTAAAGATATATATTGTTTTTATATCATAGAAGAAGAAAAATTAAAGTTAATAAGGCATTTATATTTTTAAAAAGCCAAGTTTGATGTATTACTCGAGATTTCTTATTTTTGTTGCATATTACTATTTTTCTATTTGTAGAAAGTTAATGAAAAAATAAAGGTTTTTTTGCCCAGTTGAATGCTTTTTGAAATTTCATTGTGTTAGACACAAACACGTTACCCAAGCTACCAAAGAGTCCGAACTTCATAAGTATAAACAAGCATAAAAAATAAAAAAAAAAGAACTGTTCCACTAATCCACTTTTCGGTCAGCTATACTTTGGCATATGTTTTGTGAGTTCATGGATCACAAACAACAGTTCCAAGCATTTAGCAAGGTGTATGGGTTTTTGTTGGGAATTTCATGTTTCTCTCAGTGAATAGTTGTATTGATATCAGGGACTGATTCATGAGGTGTTCACCACCATATTGCGTGGTTTATCTGGTGCAAAAATTACCAGACCTGGAAAGTTCCGCAGCTGTCAAGATGGTTATGCTGTCAAGTCATCTTTGAAAGCTGAAGATGGTGTATTATATCCACTTGAAAAAAGCTTCTTCTTTCTTCCTAAGCCTCCTACCCTTATTCTTCATGAGGAGGTATAGATTCGATATTGGATCTTGCATGTTCTGACATTATTTGATGTTTCAATTTTCAATGTTCAATCTATTGAGTTGCTTACCCTAAAATATTTTTGCAATAGATTGACTATGTTGAATTTGAGAGGCATGCTGCTGGTGGCTCAAATATGCACTACTTTGATCTTCTCATTAGACTGAAAACTGAACAAGAACATCTCTTTAGAAATATTCAGAGGAATGAATACCATAATCTTTTTGACTTTATCAGGTGAGCCTAATTTTCTTACCTCATTGTATGGAGGTGTCCATTATTTAATTTCATCTTATTTGTTCATATCTGCAGTGGAAAGGGTATGAAAATCATGAACTTGGGAGATGCTCAGGCTAGAGATGGTGTGGCAGCTGTTCTCCAAGAGGACGATGATGACGCTGTTGACCCACATCTTGAGCGCATTAGAAATGAAGCTGGTGTAGATGAGAGCGATGAAGAGGTAAGCTTTTACCTGTTTAGTACTCCCAATTAGGGTTCTCTTTCGATAGTGGTAAATACTTAACACCTACTTAGCATTTTAGGTAGGACTGGAAAGCATTAGAAGGTTTACTTTTATACTGGGTTAAGATCAAATGGTTGTAGTTTGTTAGGCCATTATGTCAGCTGAAGTGGCTATTGAGACCAAGTGGTTGTAGTTTGTTAGGCCATTATGCCAATTAGGGTTCTCTTTCGGTAGTGGTAAATACTTTACACCTACTTTGCATTTTAGGTAGGACTGGAAAGCATTAGAAGGTTTGCTTTTATACTGGGTTAAGGTCAAGTGGTTGTAGTTTGTTAGGCCATTATGTCAGCTGAAGTGGCTATTGAGACCAAGTTCGCTAGCACGATACCAGTGTTCTAATTTTGCTGTTTGTAGCTGAGATTACTAGAAAGGGATATGTGGGAATGCTAGAGGGGGAGCTTATGCCTTTGATTCTCGGGCTCAATCAGATTGCAGTTGATTACTTGTCCTTGACTTGTTTGTTGGGTTAAGACTATTGATGGCTTCATGGATAGATACCATCTTTAGACTGAGGATGTTAGAATGTAGTGATATTGAGTACTATTTTAGGAAAAATATTGGGAATATTATTTGGAATACTAGCCTCGCCACATTGTAATTTTTGAGAAGATGGTTTGTGTTGACAGTTAACGAATGAAGTTTTGAAAATGCTGACTCCCACTTGAAGTTATTTGTAATTATGGGTAGATACATATAAGTAGTTATGAGGATGTAACTCTCACTGCAAGTAATGGATAGTCACGGAAAGTGCTAGTTATGGGAATCGGATTCCCACCATTTGCTATCTGTAGTCATGCGAAAGGATAAATAGGAAAGATATGGACAGTTTAAGGTTATGATGATCAAATTTTCTAGAGTGTTCTGAACTTTGGAGGAGAGATTTTGGCCATTCCAATGGGCCATCAGCAAATAGGGATTTAATCTTCCATTGGATGAGTGCTTAATAAATACAGTTCATAACAGATACTTTTTGTTGATCACGACACGGTGCTTTTGGATGCCTCTGGTTGTGTTTTGTGGTTAATTTATAATACTTGTGCCTCTGAAATCCCAATGGTACATACTGGTTAAATGACCTTGTACTCGGTTGGATTTTAGAAGTTTTAAAACACTTTACATCAAAACTTTTGCATGATTGCCCAATATGTTGTCGTTAGTACAGATTATTGAAATGATACGAGGTTTCTGAGGCTCGAACATACTGTCTACAGCATATTGTGAGCCATGGGCACATGTGAATATCCATTCAAATGAAAATGTCACATGTTAATATAACCATGCATTATCTTCTGTTTATCTACCTTGCGAATCATTTTATTGTCTATTTTGAATTGCAACTTTTGCATATAGTCCATGAGTGGAGACTAGTGCCCAACTTTTGCATTGTGCGTTAACTTCCTGCACGTATGCTGCCCTTTTCAATCTACTCGTATGTATGAAGTTCTGAATTTACAGCAAATATATGTAGGAAGACAGAGCTGGCTGCATTTAAGCCGTGAGGCAGTGGCAGCCTATCTATATCGTTGTGTTTGAATAAACTTATCTGTGTATGTCTTTATATTTGCCTTTTGATATTCTTGTCCAACTCCATATAATATGGTAGCGTCAATATAGGATTCAGATTTTGTTGCTGACAAGGATGATGGGGGTTCTCCAACTGATGATTCAGGTGGGGATCACTCTGACGGCAGTGATAGTGGAGGTGAAAAAGAGGTCAGCATTTTTTTTTTTTTTTTTGTCTCCCTTGAGTTGAATATACACTTGCATTCTGATACCTTAAGTACCATTTTCAGAAGCCTGGAAAAAAGGAGGCTAAGAAAGACCCTTCGGCTTCCAAGCCACCTGCCAAGAAGAAACTTAAAGAAGGGACTGATGATGGTTCAAAGAAGAAGAAGCAGAAAAAGAAAAAGGATCCAAATGCACCAAAGAGGGCAATATCTGGTTTCATGTTCTTCTCTAAGATGGAAAGAGAGGTAATTTTCTCTCAATACCCTCCCATTATTTTGTTTTTACTAATACTAGGAAATTGGTAGTTTGCTTACCTGTATTTCCTCATTGCAGAACATAAAGAAAAGTACTCCTGGAATTTCTTTTACGGAATTAGGACGAGTACTTGGAGACAAGTGGAATAAGATGTCGGGTATGTGGCTTTTCTAAACTTTAATTGGAGGGATCTCTTGCATTAAAGATCCTGATGTCACCTTAAGCTAAGAAGAAACGCATGTATATTTTAGCTGAGCGTTGATTAATTTACTTGCAGCGGAAGAGAAAGAACCATACGAATCAAAGGCTCGGGATGACAAAAAACGATACAAGGAGGAAATCAGTGGGTATAAGAATGCACAACCAATGAATATAGATTCGGGAAATGAATCTGACAGTGCATAG

mRNA sequence

GTGGGACTCCGATTTTCCTCTCAAAACGATATAAAGCAAACCCTTCTTCTCGCGTTTCTTCTTCTGCGATTCGCTTCCTTGGTGTAGGTCTCAGTTTCCGGCCATGGCTGACGGTCAGCTCTACAGCAATATCTCTCTCGGCGGCCGTGGAGGCACTAACCCTGGTCAGCTTAAGACAGATCAAAGAGGTATTCTGTGGAAGAAGCAAGGAGGTGGAAAGGCAGTTGAATTGGATAAAGCAGACATTGTTGGTGTAACATGGATGAAGGTCCCAAGGACAAACCAGTTAGGAATTCGGGTCAAAGATGGATTGTATTACAAGTTCACTGGATTCCGTGATCAGGACATCAGTAGTTTAACAAAATTTTTCCAAAGTAATTGTGGAATAGCACCAGAGGAAAAGCAGCTTTCTGTCAGTGGCCGTAATTGGGGTGAAGTTGACTTGAATGGGAATATGCTTACTTTCTTGGTTGGTTCAAAGCAAGCATTTGAGGTGTCTCTAGCTGATGTTGCTCAAACACAGCTTCAAGGGAAGAACGATGTTATGCTAGAGTTTCATGTGGATGATACAACAGGAGCTAATGAGAAAGATTCTCTAATGGAGATAAGTTTTCACATACCAAATACCAATACTCAATTTGTTGGTGATGAAAGTCACCCTCCCGCTCAGGTTTTCCGCGACAAAATTATGTCCATGGCGGATGTTAGTGCGGGCATTGAGGAAGCTGTGGTCACATTTGAGGGCATTGCTATCCTCACTCCAAGGGGTCGGTACAGTGTAGAACTCCACCTTTCGTTCCTGCGGCTCCAAGGACAAGCCAATGATTTCAAAATACAATACAGCAGCGTTGTTCGCCTTTTCTTACTTCCAAAGTCCAATCAGCCACATACTTTTGTTGTAGTGACTTTAGATCCACCAATTCGTAAAGGCCAAACTTTGTACCCTCATATTGTTCTGCAGTTTGAGACTGACTTTGTGGTTCAAAGCACCCTGCAAATAGGCGATGAACTTTTCAACACAAAGTACAAGGACAAGTTAGAACCTTCTTATAAGGGACTGATTCATGAGGTGTTCACCACCATATTGCGTGGTTTATCTGGTGCAAAAATTACCAGACCTGGAAAGTTCCGCAGCTGTCAAGATGGTTATGCTGTCAAGTCATCTTTGAAAGCTGAAGATGGTGTATTATATCCACTTGAAAAAAGCTTCTTCTTTCTTCCTAAGCCTCCTACCCTTATTCTTCATGAGGAGATTGACTATGTTGAATTTGAGAGGCATGCTGCTGGTGGCTCAAATATGCACTACTTTGATCTTCTCATTAGACTGAAAACTGAACAAGAACATCTCTTTAGAAATATTCAGAGGAATGAATACCATAATCTTTTTGACTTTATCAGTGGAAAGGGTATGAAAATCATGAACTTGGGAGATGCTCAGGCTAGAGATGGTGTGGCAGCTGTTCTCCAAGAGGACGATGATGACGCTGTTGACCCACATCTTGAGCGCATTAGAAATGAAGCTGGTGTAGATGAGAGCGATGAAGAGGATTCAGATTTTGTTGCTGACAAGGATGATGGGGGTTCTCCAACTGATGATTCAGGTGGGGATCACTCTGACGGCAGTGATAGTGGAGGTGAAAAAGAGAAGCCTGGAAAAAAGGAGGCTAAGAAAGACCCTTCGGCTTCCAAGCCACCTGCCAAGAAGAAACTTAAAGAAGGGACTGATGATGGTTCAAAGAAGAAGAAGCAGAAAAAGAAAAAGGATCCAAATGCACCAAAGAGGGCAATATCTGGTTTCATGTTCTTCTCTAAGATGGAAAGAGAGAACATAAAGAAAAGTACTCCTGGAATTTCTTTTACGGAATTAGGACGAGTACTTGGAGACAAGTGGAATAAGATGTCGGCGGAAGAGAAAGAACCATACGAATCAAAGGCTCGGGATGACAAAAAACGATACAAGGAGGAAATCAGTGGGTATAAGAATGCACAACCAATGAATATAGATTCGGGAAATGAATCTGACAGTGCATAG

Coding sequence (CDS)

ATGGCTGACGGTCAGCTCTACAGCAATATCTCTCTCGGCGGCCGTGGAGGCACTAACCCTGGTCAGCTTAAGACAGATCAAAGAGGTATTCTGTGGAAGAAGCAAGGAGGTGGAAAGGCAGTTGAATTGGATAAAGCAGACATTGTTGGTGTAACATGGATGAAGGTCCCAAGGACAAACCAGTTAGGAATTCGGGTCAAAGATGGATTGTATTACAAGTTCACTGGATTCCGTGATCAGGACATCAGTAGTTTAACAAAATTTTTCCAAAGTAATTGTGGAATAGCACCAGAGGAAAAGCAGCTTTCTGTCAGTGGCCGTAATTGGGGTGAAGTTGACTTGAATGGGAATATGCTTACTTTCTTGGTTGGTTCAAAGCAAGCATTTGAGGTGTCTCTAGCTGATGTTGCTCAAACACAGCTTCAAGGGAAGAACGATGTTATGCTAGAGTTTCATGTGGATGATACAACAGGAGCTAATGAGAAAGATTCTCTAATGGAGATAAGTTTTCACATACCAAATACCAATACTCAATTTGTTGGTGATGAAAGTCACCCTCCCGCTCAGGTTTTCCGCGACAAAATTATGTCCATGGCGGATGTTAGTGCGGGCATTGAGGAAGCTGTGGTCACATTTGAGGGCATTGCTATCCTCACTCCAAGGGGTCGGTACAGTGTAGAACTCCACCTTTCGTTCCTGCGGCTCCAAGGACAAGCCAATGATTTCAAAATACAATACAGCAGCGTTGTTCGCCTTTTCTTACTTCCAAAGTCCAATCAGCCACATACTTTTGTTGTAGTGACTTTAGATCCACCAATTCGTAAAGGCCAAACTTTGTACCCTCATATTGTTCTGCAGTTTGAGACTGACTTTGTGGTTCAAAGCACCCTGCAAATAGGCGATGAACTTTTCAACACAAAGTACAAGGACAAGTTAGAACCTTCTTATAAGGGACTGATTCATGAGGTGTTCACCACCATATTGCGTGGTTTATCTGGTGCAAAAATTACCAGACCTGGAAAGTTCCGCAGCTGTCAAGATGGTTATGCTGTCAAGTCATCTTTGAAAGCTGAAGATGGTGTATTATATCCACTTGAAAAAAGCTTCTTCTTTCTTCCTAAGCCTCCTACCCTTATTCTTCATGAGGAGATTGACTATGTTGAATTTGAGAGGCATGCTGCTGGTGGCTCAAATATGCACTACTTTGATCTTCTCATTAGACTGAAAACTGAACAAGAACATCTCTTTAGAAATATTCAGAGGAATGAATACCATAATCTTTTTGACTTTATCAGTGGAAAGGGTATGAAAATCATGAACTTGGGAGATGCTCAGGCTAGAGATGGTGTGGCAGCTGTTCTCCAAGAGGACGATGATGACGCTGTTGACCCACATCTTGAGCGCATTAGAAATGAAGCTGGTGTAGATGAGAGCGATGAAGAGGATTCAGATTTTGTTGCTGACAAGGATGATGGGGGTTCTCCAACTGATGATTCAGGTGGGGATCACTCTGACGGCAGTGATAGTGGAGGTGAAAAAGAGAAGCCTGGAAAAAAGGAGGCTAAGAAAGACCCTTCGGCTTCCAAGCCACCTGCCAAGAAGAAACTTAAAGAAGGGACTGATGATGGTTCAAAGAAGAAGAAGCAGAAAAAGAAAAAGGATCCAAATGCACCAAAGAGGGCAATATCTGGTTTCATGTTCTTCTCTAAGATGGAAAGAGAGAACATAAAGAAAAGTACTCCTGGAATTTCTTTTACGGAATTAGGACGAGTACTTGGAGACAAGTGGAATAAGATGTCGGCGGAAGAGAAAGAACCATACGAATCAAAGGCTCGGGATGACAAAAAACGATACAAGGAGGAAATCAGTGGGTATAAGAATGCACAACCAATGAATATAGATTCGGGAAATGAATCTGACAGTGCATAG

Protein sequence

MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTNQLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIGDELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESDEEDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEGTDDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA

Homology

[Close]

BLAST of CmoCh14G006110 vs. ExPASy Swiss-Prot
Match: O04235 (FACT complex subunit SSRP1 OS=Vicia faba OX=3906 GN=SSRP1 PE=2 SV=1)

HSP 1 Score: 1032.7 bits (2669), Expect = 1.7e-300
Identity = 522/643 (81.18%), Postives = 579/643 (90.05%), Query Frame = 0


Query: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60
           M DG L++NI+LG RGGTNPGQ+K    GILWK+QGGGK +++DK DI+GVTWMKVP+TN
Sbjct: 1   MTDGHLFNNITLGXRGGTNPGQIKIYSGGILWKRQGGGKTIDVDKTDIMGVTWMKVPKTN 60

Query: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLG+++KDGL YKFTGFRDQD+ SLT FFQ+  GI  EEKQLSV+GRNWGEVDLNGNML 
Sbjct: 61  QLGVQIKDGLLYKFTGFRDQDVVSLTNFFQNTFGITVEEKQLSVTGRNWGEVDLNGNMLA 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           F+VGSKQAFEVSLADV+QT LQGKNDV+LEFHVDDTTGANEKDSLME+SFHIP++NTQFV
Sbjct: 121 FMVGSKQAFEVSLADVSQTNLQGKNDVILEFHVDDTTGANEKDSLMEMSFHIPSSNTQFV 180

Query: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDE+ P AQVFRDKIMSMADV  G E+AVVTF+GIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDENRPSAQVFRDKIMSMADVGVGGEDAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFV+++LDPPIRKGQTLYPHIV+QFETD VV S L I 
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDTVVDSELAIS 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           ++L+N+KYKDKLE SYKGLIHEVFTT+LRGLSG K+T+PG FRSCQDGYAVKSSLKAEDG
Sbjct: 301 EDLYNSKYKDKLELSYKGLIHEVFTTVLRGLSGGKVTKPGNFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           +LYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLK+EQEHLFRNIQ
Sbjct: 361 ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGMKIMNLGDA-QARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESD 480
           RNEYHNL+ FIS KG+KIMN+ DA QA  GVA VL+ DDDDAVDPHLERIRNEAG DESD
Sbjct: 421 RNEYHNLYGFISSKGLKIMNIADAQQAVGGVAKVLENDDDDAVDPHLERIRNEAGGDESD 480

Query: 481 EEDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEG 540
           EEDSDFV DKDDGGSPTDDSG D SD S SGGE EKP KKE KKD S+    +KKK K+ 
Sbjct: 481 EEDSDFVIDKDDGGSPTDDSGADVSDASQSGGETEKPAKKEPKKDLSSKASSSKKKSKDA 540

Query: 541 TDDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKM 600
             DG  KKKQKKKKDPNAPKRA+SGFMFFS+MEREN+KK+ PGISFT++GRVLG+KW  +
Sbjct: 541 DVDG-VKKKQKKKKDPNAPKRALSGFMFFSQMERENLKKTNPGISFTDVGRVLGEKWKNL 600

Query: 601 SAEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA 643
           SAEEKEPYE+KA+ DKKRYK+EISGYKN QPMN+DSGNESDSA
Sbjct: 601 SAEEKEPYEAKAQADKKRYKDEISGYKNPQPMNVDSGNESDSA 642

[Close]

BLAST of CmoCh14G006110 vs. ExPASy Swiss-Prot
Match: Q39601 (FACT complex subunit SSRP1 OS=Catharanthus roseus OX=4058 GN=SSRP1 PE=2 SV=1)

HSP 1 Score: 999.6 bits (2583), Expect = 1.6e-290
Identity = 516/642 (80.37%), Postives = 566/642 (88.16%), Query Frame = 0


Query: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60
           MADG L++NI+LGGRGGTNPGQL+    GILWKKQGG KAVE+DK+D+VG+TWMKVPR+N
Sbjct: 1   MADGHLFNNITLGGRGGTNPGQLRVHSGGILWKKQGGAKAVEVDKSDMVGLTWMKVPRSN 60

Query: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLG+R+KDGL+YKFTGFRDQD++SLT + QS CGI PEEKQLSVSG+NWGEVDLNGNMLT
Sbjct: 61  QLGVRIKDGLFYKFTGFRDQDVASLTSYLQSTCGITPEEKQLSVSGKNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEF          K+SLMEISFH+PN+NTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFMWMILLEQMRKNSLMEISFHVPNSNTQFV 180

Query: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDE+ PPAQVFRDKIMSMADV AG E+AVVTFEGIAILTPRGRY+VELHLSFLRLQGQAN
Sbjct: 181 GDENRPPAQVFRDKIMSMADVGAGGEDAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETD+VV S+L I 
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVDSSLSIS 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           ++L +TKYKDKLEP+YKGLIHEVFT ILRGLSGAK+TRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 EDLLSTKYKDKLEPTYKGLIHEVFTMILRGLSGAKVTRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESDE 480
           RNEYHNLFDFIS KG+KIMNLG  +A D + AVLQEDDDDAVDPHLERI+NEAG DESDE
Sbjct: 421 RNEYHNLFDFISSKGLKIMNLGADKAADAITAVLQEDDDDAVDPHLERIKNEAGGDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEGT 540
           ED DFVAD DD GSPTDDSG   SDGSDSG E E P KK+ KK+ SA K P  +K K G 
Sbjct: 481 EDEDFVADIDDEGSPTDDSGEGESDGSDSGNE-EIPTKKKPKKEASAPKVPLSRK-KVGD 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKMS 600
           DD  KKKKQKKKKDPNAPK +IS FMFFS+ EREN+KK  PGI+FT++G+VLGD+ NK  
Sbjct: 541 DDNMKKKKQKKKKDPNAPK-SISAFMFFSQTERENVKKDNPGIAFTDVGKVLGDRCNKCQ 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA 643
             +K   + +   DKKRY +EIS YKN QPMN+DSGN+SDSA
Sbjct: 601 LRKKHLLKQRLVADKKRYTDEISNYKNPQPMNVDSGNDSDSA 639

[Close]

BLAST of CmoCh14G006110 vs. ExPASy Swiss-Prot
Match: Q05153 (FACT complex subunit SSRP1 OS=Arabidopsis thaliana OX=3702 GN=SSRP1 PE=1 SV=2)

HSP 1 Score: 972.2 bits (2512), Expect = 2.8e-282
Identity = 504/646 (78.02%), Postives = 566/646 (87.62%), Query Frame = 0


Query: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60
           MADG  ++NISL GRGG NPG LK +  GI WKKQGGGKAVE+D++DIV V+W KV ++N
Sbjct: 1   MADGHSFNNISLSGRGGKNPGLLKINSGGIQWKKQGGGKAVEVDRSDIVSVSWTKVTKSN 60

Query: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLG++ KDGLYYKF GFRDQD+ SL+ FFQS+ G  P+EKQLSVSGRNWGEVDL+GN LT
Sbjct: 61  QLGVKTKDGLYYKFVGFRDQDVPSLSSFFQSSYGKTPDEKQLSVSGRNWGEVDLHGNTLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADV+QTQLQGKNDV LEFHVDDT GANEKDSLMEISFHIPN+NTQFV
Sbjct: 121 FLVGSKQAFEVSLADVSQTQLQGKNDVTLEFHVDDTAGANEKDSLMEISFHIPNSNTQFV 180

Query: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDE+ PP+QVF D I++MADVS G+E+AVVTFE IAILTPRGRY+VELHLSFLRLQGQAN
Sbjct: 181 GDENRPPSQVFNDTIVAMADVSPGVEDAVVTFESIAILTPRGRYNVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVV++LDPPIRKGQT+YPHIV+QFETD VV+S L I 
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDTVVESELSIS 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DEL NTK+KDKLE SYKGLIHEVFTT+LR LSGAKIT+PGKFRS QDG+AVKSSLKAEDG
Sbjct: 301 DELMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEK FFFLPKPPTLILH+EIDYVEFERHAAGG+NMHYFDLLIRLKT+ EHLFRNIQ
Sbjct: 361 VLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLLIRLKTDHEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVL-QEDDDDAVDPHLERIRNEAGVDESD 480
           RNEYHNL+ FIS KG+KIMNLG A   DGVAAVL   DDDDAVDPHL RIRN+A  DESD
Sbjct: 421 RNEYHNLYTFISSKGLKIMNLGGAGTADGVAAVLGDNDDDDAVDPHLTRIRNQA-ADESD 480

Query: 481 EEDSDFV-ADKDDGGSPTDDSGGDHSDGSDSG-GE-KEKPGKKEAKKDPSASKP-PAKKK 540
           EED DFV  + DDGGSPTDDSGGD SD S+ G GE KEK  KKE KK+ S+SK  P K+K
Sbjct: 481 EEDEDFVMGEDDDGGSPTDDSGGDDSDASEGGVGEIKEKSIKKEPKKEASSSKGLPPKRK 540

Query: 541 LKEGTDDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDK 600
                +  SK+KK KKKKDPNAPKRA+SGFMFFS+MER+NIKK  PGI+F E+G+VLGDK
Sbjct: 541 TVAADEGSSKRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDK 600

Query: 601 WNKMSAEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDS 642
           W +MSA++KEPYE+KA+ DK+RYK+EIS YKN QPMN+DSGN+SDS
Sbjct: 601 WRQMSADDKEPYEAKAQVDKQRYKDEISDYKNPQPMNVDSGNDSDS 645

[Close]

BLAST of CmoCh14G006110 vs. ExPASy Swiss-Prot
Match: Q9LGR0 (FACT complex subunit SSRP1-A OS=Oryza sativa subsp. japonica OX=39947 GN=SSRP1-A PE=2 SV=1)

HSP 1 Score: 901.0 bits (2327), Expect = 7.9e-261
Identity = 456/646 (70.59%), Postives = 543/646 (84.06%), Query Frame = 0


Query: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60
           M DG L++NI LGGR G+NPGQ K    G+ WK+QGGGK +E++K+D+  VTWMKVPR  
Sbjct: 1   MTDGHLFNNILLGGRAGSNPGQFKVYSGGLAWKRQGGGKTIEIEKSDLTSVTWMKVPRAY 60

Query: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLG+R KDGL+YKF GFR+QD+SSLT F Q N G++P+EKQLSVSG+NWG +D+NGNMLT
Sbjct: 61  QLGVRTKDGLFYKFIGFREQDVSSLTNFMQKNMGLSPDEKQLSVSGQNWGGIDINGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           F+VGSKQAFEVSLADV+QTQ+QGK DV+LEFHVDDTTG NEKDSLM++SFH+P +NTQF+
Sbjct: 121 FMVGSKQAFEVSLADVSQTQMQGKTDVLLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFL 180

Query: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDE+   AQV  + IM +ADV +  EEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDENRTAAQVLWETIMGVADVDSS-EEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300
           DFKIQYSS+VRLFLLPKSN PHTFVVVTLDPPIRKGQTLYPHIV+QFET+ VV+  L + 
Sbjct: 241 DFKIQYSSIVRLFLLPKSNNPHTFVVVTLDPPIRKGQTLYPHIVIQFETEAVVERNLALT 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
            E+   KYKD+LE SYKGLIHEVFT +LRGLSGAK+TRPG FRSCQDGYAVKSSLKAEDG
Sbjct: 301 KEVLAEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHLFRN 420
           +LYPLEK FFFLPKPPTLILHEEI++VEFERH AGG+++  HYFDLL++LK +QEHLFRN
Sbjct: 361 LLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRN 420

Query: 421 IQRNEYHNLFDFISGKGMKIMNLGDAQ-ARDGVAAVLQEDDDDAVDPHLERIRNEAGVDE 480
           IQR+EYHNLF+FI+GK +KIMNLGD Q A  GV AVL++ DDDAVDPHLERI+N+AG +E
Sbjct: 421 IQRSEYHNLFNFINGKHLKIMNLGDGQGATGGVTAVLRDTDDDAVDPHLERIKNQAGDEE 480

Query: 481 SDEEDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLK 540
           SDEED DFVADKDD GSPTDDSGG+ SD S+SGGEKEK  KKEA    S+SKPP K+K K
Sbjct: 481 SDEEDEDFVADKDDSGSPTDDSGGEDSDASESGGEKEKLSKKEA----SSSKPPVKRKPK 540

Query: 541 EGTDDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWN 600
              ++GS K+K KKKKDPNAPKRA++ FM+FS  ER N+K + P +  TE+ + LG+ W 
Sbjct: 541 GRDEEGSDKRKPKKKKDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMWQ 600

Query: 601 KMSAEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDS---GNESD 641
           KM+ EEK+PY  +++ DKKRY++E + Y+ A  M++DS   GNESD
Sbjct: 601 KMTGEEKQPYIQQSQVDKKRYEKESAVYRGAAAMDVDSGSGGNESD 641

[Close]

BLAST of CmoCh14G006110 vs. ExPASy Swiss-Prot
Match: Q9LEF5 (FACT complex subunit SSRP1 OS=Zea mays OX=4577 GN=SSRP1 PE=1 SV=1)

HSP 1 Score: 900.6 bits (2326), Expect = 1.0e-260
Identity = 455/644 (70.65%), Postives = 535/644 (83.07%), Query Frame = 0


Query: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60
           M DG  ++NI LGGRGGTNPGQ K    G+ WK+QGGGK +E+DKAD+  VTWMKVPR  
Sbjct: 1   MTDGHHFNNILLGGRGGTNPGQFKVHSGGLAWKRQGGGKTIEIDKADVTAVTWMKVPRAY 60

Query: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLG+R+K GL+Y+F GFR+QD+S+LT F Q N G+ P+EKQLSVSG+NWG +D++GNMLT
Sbjct: 61  QLGVRIKAGLFYRFIGFREQDVSNLTNFIQKNMGVTPDEKQLSVSGQNWGGIDIDGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           F+VGSKQAFEVSL DVAQTQ+QGK DV+LE HVDDTTGANEKDSLM++SFH+P +NTQFV
Sbjct: 121 FMVGSKQAFEVSLPDVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNTQFV 180

Query: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDES PPA +  + I+  ADV +  EE VVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDESRPPAHILWETILKFADVGSS-EEPVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300
           DFKIQYSS+VRLFLLPKSN PHTFVV+TLDPPIRKGQTLYPHIV+QFET+ VV+  L + 
Sbjct: 241 DFKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDLALS 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
            EL   KYKD+LE SYKGLIHEVFT +LRGLSGAK+TRPG FRSCQDGYAVKSSLKAEDG
Sbjct: 301 KELLVEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHLFRN 420
           +LYPLEK FFFLPKPPTLILHEEI++VEFERH AGG+++  HYFDLL++LK +QEHLFRN
Sbjct: 361 LLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRN 420

Query: 421 IQRNEYHNLFDFISGKGMKIMNL-GDAQARDGVAA-VLQEDDDDAVDPHLERIRNEAGVD 480
           IQRNEYHNLF+FI+GK +KIMNL GD Q   GV   VL++ DDDAVDPHLERI+N+AG +
Sbjct: 421 IQRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDAVDPHLERIKNQAGDE 480

Query: 481 ESDEEDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKL 540
           ESDEED DFVADKDD GSPTDDSG + SD SDSGGEKEK  KKEA    S+SKP  K+K 
Sbjct: 481 ESDEEDEDFVADKDDSGSPTDDSGDEESDASDSGGEKEKSSKKEA----SSSKPVQKRKH 540

Query: 541 KEGTDDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKW 600
           K   D+G +KKK KKKKDPNAPKRA++ FM+FS  ER N+K S P +  TE+ + LG+ W
Sbjct: 541 KARDDEGQEKKKPKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLGEMW 600

Query: 601 NKMSAEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESD 641
            KMS EEK+PY  +A+ DKKRY++E + Y+    +++DSGNESD
Sbjct: 601 QKMSGEEKQPYIQQAQVDKKRYEKESAVYRGEATVDVDSGNESD 639

[Close]

BLAST of CmoCh14G006110 vs. ExPASy TrEMBL
Match: A0A6J1J6R0 (FACT complex subunit SSRP1 OS=Cucurbita maxima OX=3661 GN=LOC111482257 PE=3 SV=1)

HSP 1 Score: 1255.4 bits (3247), Expect = 0.0e+00
Identity = 642/642 (100.00%), Postives = 642/642 (100.00%), Query Frame = 0


Query: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60
           MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN
Sbjct: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60

Query: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT
Sbjct: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180

Query: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESDE 480
           RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESDE
Sbjct: 421 RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEGT 540
           EDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEGT
Sbjct: 481 EDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEGT 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKMS 600
           DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKMS
Sbjct: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKMS 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA 643
           AEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA
Sbjct: 601 AEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA 642

[Close]

BLAST of CmoCh14G006110 vs. ExPASy TrEMBL
Match: A0A6J1F4G5 (FACT complex subunit SSRP1 OS=Cucurbita moschata OX=3662 GN=LOC111442077 PE=3 SV=1)

HSP 1 Score: 1255.4 bits (3247), Expect = 0.0e+00
Identity = 642/642 (100.00%), Postives = 642/642 (100.00%), Query Frame = 0


Query: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60
           MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN
Sbjct: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60

Query: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT
Sbjct: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180

Query: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESDE 480
           RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESDE
Sbjct: 421 RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEGT 540
           EDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEGT
Sbjct: 481 EDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEGT 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKMS 600
           DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKMS
Sbjct: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKMS 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA 643
           AEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA
Sbjct: 601 AEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA 642

[Close]

BLAST of CmoCh14G006110 vs. ExPASy TrEMBL
Match: A0A0A0LG27 (FACT complex subunit SSRP1 OS=Cucumis sativus OX=3659 GN=Csa_3G827340 PE=3 SV=1)

HSP 1 Score: 1219.5 bits (3154), Expect = 0.0e+00
Identity = 624/642 (97.20%), Postives = 631/642 (98.29%), Query Frame = 0


Query: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60
           MADGQLY+NISLGGRGGTNPGQLKTDQRGI WKKQGGGKA+E+DKADIVGVTWMKVPR+N
Sbjct: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60

Query: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKF GFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT
Sbjct: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180

Query: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDES PPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETD+VVQSTLQIG
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESDE 480
           RNEYHNLFDFISGKG+KIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAG DESDE
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEGT 540
           EDSDFVADKDDGGSPTDDSGGD SDGS SGGEKEKPGKKEAKKDPSASK PAKKK +EG 
Sbjct: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKMS 600
           DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKS PGISFTELGRVLGDKWNKMS
Sbjct: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA 643
           AEEKEPYESKARDDKKRYKEEISGYKN QPMNIDSGNESDSA
Sbjct: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 642

[Close]

BLAST of CmoCh14G006110 vs. ExPASy TrEMBL
Match: A0A1S3B828 (FACT complex subunit SSRP1 OS=Cucumis melo OX=3656 GN=LOC103487021 PE=3 SV=1)

HSP 1 Score: 1216.4 bits (3146), Expect = 0.0e+00
Identity = 622/642 (96.88%), Postives = 630/642 (98.13%), Query Frame = 0


Query: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60
           MADGQLY+NISLGGRGGTNPGQLKTDQRGI WKKQGGGKA+E+DKADIVGVTWMKVPR+N
Sbjct: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60

Query: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKF GFRDQDISSLTK+FQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT
Sbjct: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKYFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180

Query: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDES PPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETD+VVQSTLQIG
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DEL NTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 DELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESDE 480
           RNEYHNLFDFISGKG+KIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAG DESDE
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEGT 540
           EDSDFVADKDDGGSPTDDSGGD SDGS SGGEKEKPGKKEAKKDPSASK PAKKK +EG 
Sbjct: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKMS 600
           DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKS PGISFTELGRVLGDKWNKMS
Sbjct: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA 643
           AEEKEPYESKARDDKKRYKEEISGYKN QPMNIDSGNESDSA
Sbjct: 601 AEEKEPYESKARDDKKRYKEEISGYKNTQPMNIDSGNESDSA 642

[Close]

BLAST of CmoCh14G006110 vs. ExPASy TrEMBL
Match: A0A6J1I3D5 (FACT complex subunit SSRP1 OS=Cucurbita maxima OX=3661 GN=LOC111469559 PE=3 SV=1)

HSP 1 Score: 1198.7 bits (3100), Expect = 0.0e+00
Identity = 613/642 (95.48%), Postives = 626/642 (97.51%), Query Frame = 0


Query: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60
           MADGQLY+NISLGGRGGTNPGQLKTDQRGI WKKQGGGKAVE+DK DIVGVTWMKVPRTN
Sbjct: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAVEVDKEDIVGVTWMKVPRTN 60

Query: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKF GFRDQDI+SLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT
Sbjct: 61  QLGIRVKDGLYYKFIGFRDQDINSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180

Query: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDE+HPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDENHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETD+VVQSTLQIG
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DEL +TK+KDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 DELLHTKFKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTL+LH+EIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLLLHDEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESDE 480
           RNEYHNLFDFISGKG+KIMNLGDAQARDGVAAVLQ DDDDAVDPHLERIRNEAG DESDE
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQADDDDAVDPHLERIRNEAGGDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEGT 540
           EDSDFV +KDDGGSPTDDSGG+ SD S SGGEKEKPGKKEAKKD SASKPPAKKK +EGT
Sbjct: 481 EDSDFVVEKDDGGSPTDDSGGEDSDASVSGGEKEKPGKKEAKKDHSASKPPAKKKPREGT 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKMS 600
           DDGSKKKK KKKKDPNAPKRAISGFMFFSKMERENIKKS PGISFTELGRVLGDKWNKMS
Sbjct: 541 DDGSKKKKPKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA 643
           AEEKEPYESKARDDK RYKEEISGYKN QPMNIDSGNESDSA
Sbjct: 601 AEEKEPYESKARDDKIRYKEEISGYKNPQPMNIDSGNESDSA 642

[Close]

BLAST of CmoCh14G006110 vs. TAIR 10
Match: AT3G28730.1 (high mobility group )

HSP 1 Score: 972.2 bits (2512), Expect = 2.0e-283
Identity = 504/646 (78.02%), Postives = 566/646 (87.62%), Query Frame = 0


Query: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60
           MADG  ++NISL GRGG NPG LK +  GI WKKQGGGKAVE+D++DIV V+W KV ++N
Sbjct: 1   MADGHSFNNISLSGRGGKNPGLLKINSGGIQWKKQGGGKAVEVDRSDIVSVSWTKVTKSN 60

Query: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLG++ KDGLYYKF GFRDQD+ SL+ FFQS+ G  P+EKQLSVSGRNWGEVDL+GN LT
Sbjct: 61  QLGVKTKDGLYYKFVGFRDQDVPSLSSFFQSSYGKTPDEKQLSVSGRNWGEVDLHGNTLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADV+QTQLQGKNDV LEFHVDDT GANEKDSLMEISFHIPN+NTQFV
Sbjct: 121 FLVGSKQAFEVSLADVSQTQLQGKNDVTLEFHVDDTAGANEKDSLMEISFHIPNSNTQFV 180

Query: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDE+ PP+QVF D I++MADVS G+E+AVVTFE IAILTPRGRY+VELHLSFLRLQGQAN
Sbjct: 181 GDENRPPSQVFNDTIVAMADVSPGVEDAVVTFESIAILTPRGRYNVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVV++LDPPIRKGQT+YPHIV+QFETD VV+S L I 
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDTVVESELSIS 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DEL NTK+KDKLE SYKGLIHEVFTT+LR LSGAKIT+PGKFRS QDG+AVKSSLKAEDG
Sbjct: 301 DELMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEK FFFLPKPPTLILH+EIDYVEFERHAAGG+NMHYFDLLIRLKT+ EHLFRNIQ
Sbjct: 361 VLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLLIRLKTDHEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVL-QEDDDDAVDPHLERIRNEAGVDESD 480
           RNEYHNL+ FIS KG+KIMNLG A   DGVAAVL   DDDDAVDPHL RIRN+A  DESD
Sbjct: 421 RNEYHNLYTFISSKGLKIMNLGGAGTADGVAAVLGDNDDDDAVDPHLTRIRNQA-ADESD 480

Query: 481 EEDSDFV-ADKDDGGSPTDDSGGDHSDGSDSG-GE-KEKPGKKEAKKDPSASKP-PAKKK 540
           EED DFV  + DDGGSPTDDSGGD SD S+ G GE KEK  KKE KK+ S+SK  P K+K
Sbjct: 481 EEDEDFVMGEDDDGGSPTDDSGGDDSDASEGGVGEIKEKSIKKEPKKEASSSKGLPPKRK 540

Query: 541 LKEGTDDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDK 600
                +  SK+KK KKKKDPNAPKRA+SGFMFFS+MER+NIKK  PGI+F E+G+VLGDK
Sbjct: 541 TVAADEGSSKRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDK 600

Query: 601 WNKMSAEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDS 642
           W +MSA++KEPYE+KA+ DK+RYK+EIS YKN QPMN+DSGN+SDS
Sbjct: 601 WRQMSADDKEPYEAKAQVDKQRYKDEISDYKNPQPMNVDSGNDSDS 645

[Close]

BLAST of CmoCh14G006110 vs. TAIR 10
Match: AT3G51880.1 (high mobility group B1 )

HSP 1 Score: 55.1 bits (131), Expect = 2.5e-07
Identity = 48/138 (34.78%), Postives = 67/138 (48.55%), Query Frame = 0


Query: 513 KEKPGKKEAKKDPSASKP-----------PAKKKLKEGTDDGSKKKKQKKKKDPNAPKRA 572
           K   GK + K    A KP           PA+K  K  T     +K++K KKDPN PKRA
Sbjct: 2   KTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRET-----RKEKKAKKDPNKPKRA 61

Query: 573 ISGFMFFSKMERENIKKSTPGI-SFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKE 632
            S F  F +  R   KK  P + + + +G+  G KW  MS  EK PYE KA   K  Y++
Sbjct: 62  PSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK 121

Query: 633 EISGYKNAQPMNIDSGNE 639
           ++  Y      N++ G++
Sbjct: 122 QMDAYNK----NLEEGSD 130

[Close]

BLAST of CmoCh14G006110 vs. TAIR 10
Match: AT3G51880.2 (high mobility group B1 )

HSP 1 Score: 55.1 bits (131), Expect = 2.5e-07
Identity = 48/138 (34.78%), Postives = 67/138 (48.55%), Query Frame = 0


Query: 513 KEKPGKKEAKKDPSASKP-----------PAKKKLKEGTDDGSKKKKQKKKKDPNAPKRA 572
           K   GK + K    A KP           PA+K  K  T     +K++K KKDPN PKRA
Sbjct: 2   KTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRET-----RKEKKAKKDPNKPKRA 61

Query: 573 ISGFMFFSKMERENIKKSTPGI-SFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKE 632
            S F  F +  R   KK  P + + + +G+  G KW  MS  EK PYE KA   K  Y++
Sbjct: 62  PSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK 121

Query: 633 EISGYKNAQPMNIDSGNE 639
           ++  Y      N++ G++
Sbjct: 122 QMDAYNK----NLEEGSD 130

[Close]

BLAST of CmoCh14G006110 vs. TAIR 10
Match: AT3G51880.3 (high mobility group B1 )

HSP 1 Score: 55.1 bits (131), Expect = 2.5e-07
Identity = 48/138 (34.78%), Postives = 67/138 (48.55%), Query Frame = 0


Query: 513 KEKPGKKEAKKDPSASKP-----------PAKKKLKEGTDDGSKKKKQKKKKDPNAPKRA 572
           K   GK + K    A KP           PA+K  K  T     +K++K KKDPN PKRA
Sbjct: 2   KTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRET-----RKEKKAKKDPNKPKRA 61

Query: 573 ISGFMFFSKMERENIKKSTPGI-SFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKE 632
            S F  F +  R   KK  P + + + +G+  G KW  MS  EK PYE KA   K  Y++
Sbjct: 62  PSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK 121

Query: 633 EISGYKNAQPMNIDSGNE 639
           ++  Y      N++ G++
Sbjct: 122 QMDAYNK----NLEEGSD 130

[Close]

BLAST of CmoCh14G006110 vs. TAIR 10
Match: AT3G51880.4 (high mobility group B1 )

HSP 1 Score: 55.1 bits (131), Expect = 2.5e-07
Identity = 48/138 (34.78%), Postives = 67/138 (48.55%), Query Frame = 0


Query: 513 KEKPGKKEAKKDPSASKP-----------PAKKKLKEGTDDGSKKKKQKKKKDPNAPKRA 572
           K   GK + K    A KP           PA+K  K  T     +K++K KKDPN PKRA
Sbjct: 2   KTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRET-----RKEKKAKKDPNKPKRA 61

Query: 573 ISGFMFFSKMERENIKKSTPGI-SFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKE 632
            S F  F +  R   KK  P + + + +G+  G KW  MS  EK PYE KA   K  Y++
Sbjct: 62  PSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK 121

Query: 633 EISGYKNAQPMNIDSGNE 639
           ++  Y      N++ G++
Sbjct: 122 QMDAYNK----NLEEGSD 130

The following BLAST results are available for this feature:

BLAST of CmoCh14G006110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04235	1.7e-300	81.18	FACT complex subunit SSRP1 OS=Vicia faba OX=3906 GN=SSRP1 PE=2 SV=1	[more]
Q39601	1.6e-290	80.37	FACT complex subunit SSRP1 OS=Catharanthus roseus OX=4058 GN=SSRP1 PE=2 SV=1	[more]
Q05153	2.8e-282	78.02	FACT complex subunit SSRP1 OS=Arabidopsis thaliana OX=3702 GN=SSRP1 PE=1 SV=2	[more]
Q9LGR0	7.9e-261	70.59	FACT complex subunit SSRP1-A OS=Oryza sativa subsp. japonica OX=39947 GN=SSRP1-A...	[more]
Q9LEF5	1.0e-260	70.65	FACT complex subunit SSRP1 OS=Zea mays OX=4577 GN=SSRP1 PE=1 SV=1	[more]

BLAST of CmoCh14G006110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J6R0	0.0e+00	100.00	FACT complex subunit SSRP1 OS=Cucurbita maxima OX=3661 GN=LOC111482257 PE=3 SV=1	[more]
A0A6J1F4G5	0.0e+00	100.00	FACT complex subunit SSRP1 OS=Cucurbita moschata OX=3662 GN=LOC111442077 PE=3 SV...	[more]
A0A0A0LG27	0.0e+00	97.20	FACT complex subunit SSRP1 OS=Cucumis sativus OX=3659 GN=Csa_3G827340 PE=3 SV=1	[more]
A0A1S3B828	0.0e+00	96.88	FACT complex subunit SSRP1 OS=Cucumis melo OX=3656 GN=LOC103487021 PE=3 SV=1	[more]
A0A6J1I3D5	0.0e+00	95.48	FACT complex subunit SSRP1 OS=Cucurbita maxima OX=3661 GN=LOC111469559 PE=3 SV=1	[more]

BLAST of CmoCh14G006110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28730.1	2.0e-283	78.02	high mobility group	[more]
AT3G51880.1	2.5e-07	34.78	high mobility group B1	[more]
AT3G51880.2	2.5e-07	34.78	high mobility group B1	[more]
AT3G51880.3	2.5e-07	34.78	high mobility group B1	[more]
AT3G51880.4	2.5e-07	34.78	high mobility group B1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 608..628
None	No IPR available	GENE3D	2.30.29.150		coord: 199..338 e-value: 1.6E-55 score: 188.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 488..548
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 628..642
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 594..642
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 470..566
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 596..623
None	No IPR available	PANTHER	PTHR45849	FACT COMPLEX SUBUNIT SSRP1	coord: 1..640
None	No IPR available	PANTHER	PTHR45849:SF2	FACT COMPLEX SUBUNIT SSRP1-B	coord: 1..640
None	No IPR available	CDD	cd13231	PH2_SSRP1-like	coord: 342..441 e-value: 1.58044E-44 score: 152.26
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 558..623 e-value: 1.03121E-25 score: 98.4689
None	No IPR available	CDD	cd13230	PH1_SSRP1-like	coord: 207..340 e-value: 1.11422E-66 score: 212.775
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 206..440
IPR000969	Structure-specific recognition protein	PRINTS	PR00887	SSRCOGNITION	coord: 219..235 score: 64.71 coord: 264..280 score: 72.06 coord: 329..342 score: 60.71 coord: 356..374 score: 67.76 coord: 400..416 score: 56.62 coord: 374..391 score: 67.36 coord: 241..257 score: 73.53 coord: 416..434 score: 59.87
IPR013719	Domain of unknown function DUF1747	SMART	SM01287	Rtt106_2	coord: 348..441 e-value: 7.5E-34 score: 128.5
IPR013719	Domain of unknown function DUF1747	PFAM	PF08512	Rtt106	coord: 350..439 e-value: 1.3E-19 score: 70.3
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 557..627 e-value: 4.2E-27 score: 106.1
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 558..626 e-value: 2.6E-21 score: 75.8
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 558..626 score: 19.91151
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 339..448 e-value: 9.0E-34 score: 117.7
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 1..93 e-value: 8.4E-19 score: 69.7
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 542..636 e-value: 1.2E-28 score: 101.4
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 544..627
IPR038167	SSRP1 domain superfamily	GENE3D	2.30.29.220		coord: 97..179 e-value: 4.2E-25 score: 89.4
IPR024954	SSRP1 domain	PFAM	PF03531	SSrecog	coord: 106..175 e-value: 4.4E-25 score: 87.5
IPR035417	FACT complex subunit POB3-like, N-terminal PH domain	PFAM	PF17292	POB3_N	coord: 7..98 e-value: 1.2E-21 score: 77.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G006110.1	CmoCh14G006110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
biological_process	GO:0010197	polar nucleus fusion
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
cellular_component	GO:0000791	euchromatin
cellular_component	GO:0035101	FACT complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0042393	histone binding
molecular_function	GO:0031491	nucleosome binding