CmoCh14G006010 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G006010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	zinc-finger homeodomain protein 9-like
Location	Cmo_Chr14: 3042234 .. 3043109 (+)
RNA-Seq Expression	CmoCh14G006010
Synteny	CmoCh14G006010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTGACTCCTGCGATTTCCACCGCCGTCGCCGCCATTACCACCGGCGGAGGACCCGTCAAATCCCCTGAATTAGACACCGACACACCCATCAAAATCCAACCCACCACCAAATCTCACCCTTTCACCAACGGTGTCCTCAAGCGCCACCATAACACCCCACCGCCTGTCGTCTACAAAGAATGCCTCAAGAATCACGCCGCCAGTTTAGGTGCCCATGCTTTGGACGGCTGTGGCGAGTTCATGCCTTCCTCTACCGCCACCGCCTCCGATCCCACTTCCCTTAAATGCGCTGCTTGCGGCTGCCACCGGAATTTCCACCGCCGTGAGCCGGAGGACTCAATCGCCACCCCGACGACAACCCATATCATTGAGTACCAACCTCACCATCGTCACCACCCACCGCCACCTGCAGCAAATCGAAGCCCAAGCTCTGCCTCTCCTCCACCGATCTCCTCCTCCTACTACCCTTCAGCTCCCCACATGCTTCTTGCCCTTTCCGGCGGACTGCCGGAAAACGCCAGCGGTGGATTCCACCACTCGATTCTGACTCCAAGCCCCAATTCGAGAAAGCGATTCAGAACAAAATTCACTCAAAATCAAAAGGAAAAAATGTATGAATTTGCAGAGAAAGTGGGTTGGAAGATTCAAAAACGAGACGAGGATATGATCCAAGAATTCTGCAGCAACGTCGGAGTAGACAGAGGCGTTCTCAAAGTTTGGATGCACAACAACAAAAACACTTTGGGGAAAAAAGACGGCACCCAGAACACCAACGGCAGCGGTGGCGACGGCGACGGCGACGGCGATGAGAAAATGAACGGCGGCAACGAGCCACACGCCGCCGCAAATGGGTCGTCTTCTTCATCTTGA

mRNA sequence

ATGGACTTGACTCCTGCGATTTCCACCGCCGTCGCCGCCATTACCACCGGCGGAGGACCCGTCAAATCCCCTGAATTAGACACCGACACACCCATCAAAATCCAACCCACCACCAAATCTCACCCTTTCACCAACGGTGTCCTCAAGCGCCACCATAACACCCCACCGCCTGTCGTCTACAAAGAATGCCTCAAGAATCACGCCGCCAGTTTAGGTGCCCATGCTTTGGACGGCTGTGGCGAGTTCATGCCTTCCTCTACCGCCACCGCCTCCGATCCCACTTCCCTTAAATGCGCTGCTTGCGGCTGCCACCGGAATTTCCACCGCCGTGAGCCGGAGGACTCAATCGCCACCCCGACGACAACCCATATCATTGAGTACCAACCTCACCATCGTCACCACCCACCGCCACCTGCAGCAAATCGAAGCCCAAGCTCTGCCTCTCCTCCACCGATCTCCTCCTCCTACTACCCTTCAGCTCCCCACATGCTTCTTGCCCTTTCCGGCGGACTGCCGGAAAACGCCAGCGGTGGATTCCACCACTCGATTCTGACTCCAAGCCCCAATTCGAGAAAGCGATTCAGAACAAAATTCACTCAAAATCAAAAGGAAAAAATGTATGAATTTGCAGAGAAAGTGGGTTGGAAGATTCAAAAACGAGACGAGGATATGATCCAAGAATTCTGCAGCAACGTCGGAGTAGACAGAGGCGTTCTCAAAGTTTGGATGCACAACAACAAAAACACTTTGGGGAAAAAAGACGGCACCCAGAACACCAACGGCAGCGGTGGCGACGGCGACGGCGACGGCGATGAGAAAATGAACGGCGGCAACGAGCCACACGCCGCCGCAAATGGGTCGTCTTCTTCATCTTGA

Coding sequence (CDS)

ATGGACTTGACTCCTGCGATTTCCACCGCCGTCGCCGCCATTACCACCGGCGGAGGACCCGTCAAATCCCCTGAATTAGACACCGACACACCCATCAAAATCCAACCCACCACCAAATCTCACCCTTTCACCAACGGTGTCCTCAAGCGCCACCATAACACCCCACCGCCTGTCGTCTACAAAGAATGCCTCAAGAATCACGCCGCCAGTTTAGGTGCCCATGCTTTGGACGGCTGTGGCGAGTTCATGCCTTCCTCTACCGCCACCGCCTCCGATCCCACTTCCCTTAAATGCGCTGCTTGCGGCTGCCACCGGAATTTCCACCGCCGTGAGCCGGAGGACTCAATCGCCACCCCGACGACAACCCATATCATTGAGTACCAACCTCACCATCGTCACCACCCACCGCCACCTGCAGCAAATCGAAGCCCAAGCTCTGCCTCTCCTCCACCGATCTCCTCCTCCTACTACCCTTCAGCTCCCCACATGCTTCTTGCCCTTTCCGGCGGACTGCCGGAAAACGCCAGCGGTGGATTCCACCACTCGATTCTGACTCCAAGCCCCAATTCGAGAAAGCGATTCAGAACAAAATTCACTCAAAATCAAAAGGAAAAAATGTATGAATTTGCAGAGAAAGTGGGTTGGAAGATTCAAAAACGAGACGAGGATATGATCCAAGAATTCTGCAGCAACGTCGGAGTAGACAGAGGCGTTCTCAAAGTTTGGATGCACAACAACAAAAACACTTTGGGGAAAAAAGACGGCACCCAGAACACCAACGGCAGCGGTGGCGACGGCGACGGCGACGGCGATGAGAAAATGAACGGCGGCAACGAGCCACACGCCGCCGCAAATGGGTCGTCTTCTTCATCTTGA

Protein sequence

MDLTPAISTAVAAITTGGGPVKSPELDTDTPIKIQPTTKSHPFTNGVLKRHHNTPPPVVYKECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIATPTTTHIIEYQPHHRHHPPPPAANRSPSSASPPPISSSYYPSAPHMLLALSGGLPENASGGFHHSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSNVGVDRGVLKVWMHNNKNTLGKKDGTQNTNGSGGDGDGDGDEKMNGGNEPHAAANGSSSSS

Homology

[Close]

BLAST of CmoCh14G006010 vs. ExPASy Swiss-Prot
Match: Q9LHF0 (Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.7e-77
Identity = 174/310 (56.13%), Postives = 207/310 (66.77%), Query Frame = 0


Query: 22  KSPELDTDTPIKIQPTTKSHPFTNGVLKR---HHNTPPPVVYKECLKNHAASLGAHALDG 81
           KSPE +++TP +IQP  K   F+NG++KR   HH+    V YKECLKNHAA++G HALDG
Sbjct: 12  KSPEPESETPTRIQP-AKPISFSNGIIKRHHHHHHNNNKVTYKECLKNHAAAIGGHALDG 71

Query: 82  CGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIATP--------TTTHIIEYQPH 141
           CGEFMPS ++T SDPTSLKCAACGCHRNFHRRE +DS A P        TTT  IEYQPH
Sbjct: 72  CGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDDSSAVPPPSLLPSSTTTAAIEYQPH 131

Query: 142 HRHHPPPPAA---NRSPSSASPPPISSSYYPSAPHMLLALSGGLPE------NASGGFHH 201
           HRHHPPPP A    RSP+S+SPPPISSSY      MLLALSG          N +   +H
Sbjct: 132 HRHHPPPPLAPPLPRSPNSSSPPPISSSY------MLLALSGNNKTAPFSDLNFAAAANH 191

Query: 202 SILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSNVGVDRGVLKV 261
             L+ +P SRKRFRTKF+ NQKEKM+EFA+++GWKIQKRDED +++FC  +GVD+GVLKV
Sbjct: 192 --LSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRDEDEVRDFCREIGVDKGVLKV 251

Query: 262 WMHNNKNTL-----GKKDGTQNTNGSGG-------------DGDGDGD--EKMNGGNEPH 292
           WMHNNKN+      G     +N NG GG             DGDG G   E  +GG +  
Sbjct: 252 WMHNNKNSFKFSGGGATTVQRNDNGIGGENSNDDGVRGLANDGDGGGGRFESDSGGADGG 311

[Close]

BLAST of CmoCh14G006010 vs. ExPASy Swiss-Prot
Match: Q9FIW9 (Zinc-finger homeodomain protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZHD10 PE=1 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 5.1e-74
Identity = 167/320 (52.19%), Postives = 207/320 (64.69%), Query Frame = 0


Query: 1   MDLTPAISTAVAAITTGGGPVKSPELDTDTPIKIQPTTKSHPFTNGVLKRHHNTPPPVV- 60
           MD+TP I+T     TT   P KSPE +++TP +IQP  K   F+NG++KRHH+   P++ 
Sbjct: 2   MDMTPTITT-----TTTPTP-KSPEPESETPTRIQP-AKPISFSNGIIKRHHHHHHPLLF 61

Query: 61  -YKECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPED---- 120
            YKECLKNHAA+LG HALDGCGEFMPS ++ +SDPTSLKCAACGCHRNFHRR+P++    
Sbjct: 62  TYKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNNDS 121

Query: 121 SIATPTTTHIIEYQPHHRHH---PPPPAANRSPSSASPPPISSSYYPSAPHMLLALSG-- 180
           S   P  +  +EYQPHHRHH   PPPP   RSP+SASPPPISSSY      MLL+LSG  
Sbjct: 122 SQIPPPPSTAVEYQPHHRHHPPPPPPPPPPRSPNSASPPPISSSY------MLLSLSGTN 181

Query: 181 ----------GLPENASGGFHHSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQK 240
                      L  +A    HH        SRKRFRTKF+Q QKEKM+EFAE+VGWK+QK
Sbjct: 182 NNNNNLASFSDLNFSAGNNHHHHHQHTLHGSRKRFRTKFSQFQKEKMHEFAERVGWKMQK 241

Query: 241 RDEDMIQEFCSNVGVDRGVLKVWMHNNKNTLGKKDGTQN-----TNGSGG---------D 286
           RDED +++FC  +GVD+ VLKVWMHNNKNT  ++D   N      NG G          +
Sbjct: 242 RDEDDVRDFCRQIGVDKSVLKVWMHNNKNTFNRRDIAGNEIRQIDNGGGNHTPILAGEIN 301

[Close]

BLAST of CmoCh14G006010 vs. ExPASy Swiss-Prot
Match: Q9LXG0 (Zinc-finger homeodomain protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZHD8 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.4e-58
Identity = 140/272 (51.47%), Postives = 172/272 (63.24%), Query Frame = 0


Query: 11  VAAITTGGGPVKSPELDTDTPIKIQPTTKSHPFTNGVLKRHHNTPPPVV----YKECLKN 70
           +A  TT    + S + + + PI+IQP  K   F+NG    HH+     V    YKECLKN
Sbjct: 4   IATTTTIVSDLDSRQPEIEAPIRIQP-AKPISFSNGKRCHHHHLASEAVAVATYKECLKN 63

Query: 71  HAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIATPTTTHIIE 130
           HAA +G HALDGCGEFMPS +  ++DP SL CAACGCHRNFHRRE ED  +       IE
Sbjct: 64  HAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRRE-EDPSSLSAIVPAIE 123

Query: 131 YQPHHRHHPPPP-----AANRSP---SSASPPPISSSYYPSAPHMLLALSGGLPENASGG 190
           ++PH+RH  PPP     A  RSP    SASPPPISSSY      MLLALSGG      GG
Sbjct: 124 FRPHNRHQLPPPPPPHLAGIRSPDDDDSASPPPISSSY------MLLALSGG-----RGG 183

Query: 191 FHHSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSNVGVDRGV 250
            +    T  P SRKRFRTKF+Q QKEKM+EF+E+VGW++ K D+ +++EFC  +GVD+ V
Sbjct: 184 AN----TAVPMSRKRFRTKFSQYQKEKMFEFSERVGWRMPKADDVVVKEFCREIGVDKSV 243

Query: 251 LKVWMHNNKNTLGKKDGTQNTNGS---GGDGD 268
            KVWMHNNK  +  + G +  NG    GG GD
Sbjct: 244 FKVWMHNNK--ISGRSGARRANGGVVVGGVGD 256

[Close]

BLAST of CmoCh14G006010 vs. ExPASy Swiss-Prot
Match: Q9SEZ1 (Zinc-finger homeodomain protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZHD11 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.1e-47
Identity = 114/223 (51.12%), Postives = 138/223 (61.88%), Query Frame = 0


Query: 58  VVYKECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIA 117
           V YKECLKNHAA+LG HALDGCGEFMPS TAT++DP+SL+CAACGCHRNFHRR+P +++ 
Sbjct: 29  VCYKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCHRNFHRRDPSENLN 88

Query: 118 TPTTTHIIEYQPHHRHHPPPPAANRSPSSASPPPISSSYYPSAP--HMLLALSGGLPENA 177
             T   I            P      PS     P+  SYY SAP  H++L+LS G P  +
Sbjct: 89  FLTAPPI----------SSPSGTESPPSRHVSSPVPCSYYTSAPPHHVILSLSSGFPGPS 148

Query: 178 SGGFHHSILTPSPNS-----RKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCS 237
                   +  S NS     RKR RTKFT  QK KM  FAEK GWKI   DE  ++EFC+
Sbjct: 149 D---QDPTVVRSENSSRGAMRKRTRTKFTPEQKIKMRAFAEKAGWKINGCDEKSVREFCN 208

Query: 238 NVGVDRGVLKVWMHNNKNTL--GKKDGTQ-----NTNGSGGDG 267
            VG++RGVLKVWMHNNK +L  GK    +     NT+ + GDG
Sbjct: 209 EVGIERGVLKVWMHNNKYSLLNGKIREIEHGLCLNTHSNDGDG 238

[Close]

BLAST of CmoCh14G006010 vs. ExPASy Swiss-Prot
Match: Q6ER21 (Zinc-finger homeodomain protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD9 PE=3 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 7.7e-46
Identity = 111/240 (46.25%), Postives = 139/240 (57.92%), Query Frame = 0


Query: 59  VYKECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIAT 118
           VY+ECLKNHAASLG HALDGCGEFMPS  A  +DPTSL+CAACGCHRNFHRR PE S   
Sbjct: 40  VYRECLKNHAASLGGHALDGCGEFMPSPAANPADPTSLRCAACGCHRNFHRRLPEGSPPP 99

Query: 119 PTTTHIIEY--QPHHRHHPPP----PAANRSPS---------------SASPPPISSS-- 178
           P    ++     P HR    P    P  +   S               S  PPP++++  
Sbjct: 100 PPPPALLPAPPMPPHRGEETPEVRLPGVDGDESDSDSDGSEYDDERSVSPPPPPLAAAVA 159

Query: 179 ---YYPSAPHMLLALSGG-----LPENASGGFHHSILTPSPNS----RKRFRTKFTQNQK 238
              YYPSAPHMLL+L        LP         +   P        RKRFRTKFT  QK
Sbjct: 160 HQVYYPSAPHMLLSLGSSGQAQRLPPQVMSPAAAAAPPPGGGGGGMPRKRFRTKFTAEQK 219

Query: 239 EKMYEFAEKVGWKIQKRDEDMIQEFCSNVGVDRGVLKVWMHNNK-NTLGKKDGTQNTNGS 263
           ++M E +E++GW++QKRDE ++ E+C ++GV +GV KVWMHNNK N LG     ++ + S
Sbjct: 220 QRMQELSERLGWRLQKRDEAIVDEWCRDIGVGKGVFKVWMHNNKHNYLGGHSARRSASSS 279

[Close]

BLAST of CmoCh14G006010 vs. ExPASy TrEMBL
Match: A0A6J1F1H4 (zinc-finger homeodomain protein 9-like OS=Cucurbita moschata OX=3662 GN=LOC111441334 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.2e-163
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MDLTPAISTAVAAITTGGGPVKSPELDTDTPIKIQPTTKSHPFTNGVLKRHHNTPPPVVY 60
           MDLTPAISTAVAAITTGGGPVKSPELDTDTPIKIQPTTKSHPFTNGVLKRHHNTPPPVVY
Sbjct: 1   MDLTPAISTAVAAITTGGGPVKSPELDTDTPIKIQPTTKSHPFTNGVLKRHHNTPPPVVY 60

Query: 61  KECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIATPT 120
           KECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIATPT
Sbjct: 61  KECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIATPT 120

Query: 121 TTHIIEYQPHHRHHPPPPAANRSPSSASPPPISSSYYPSAPHMLLALSGGLPENASGGFH 180
           TTHIIEYQPHHRHHPPPPAANRSPSSASPPPISSSYYPSAPHMLLALSGGLPENASGGFH
Sbjct: 121 TTHIIEYQPHHRHHPPPPAANRSPSSASPPPISSSYYPSAPHMLLALSGGLPENASGGFH 180

Query: 181 HSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSNVGVDRGVLK 240
           HSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSNVGVDRGVLK
Sbjct: 181 HSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSNVGVDRGVLK 240

Query: 241 VWMHNNKNTLGKKDGTQNTNGSGGDGDGDGDEKMNGGNEPHAAANGSSSSS 292
           VWMHNNKNTLGKKDGTQNTNGSGGDGDGDGDEKMNGGNEPHAAANGSSSSS
Sbjct: 241 VWMHNNKNTLGKKDGTQNTNGSGGDGDGDGDEKMNGGNEPHAAANGSSSSS 291

[Close]

BLAST of CmoCh14G006010 vs. ExPASy TrEMBL
Match: A0A6J1J3I4 (zinc-finger homeodomain protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111482340 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.3e-156
Identity = 281/291 (96.56%), Postives = 284/291 (97.59%), Query Frame = 0


Query: 1   MDLTPAISTAVAAITTGGGPVKSPELDTDTPIKIQPTTKSHPFTNGVLKRHHNTPPPVVY 60
           MDLTPAISTAVAAITTGGGPVKSPELDTDTPIKIQPTTKSHPFTNGVLKR H+TPPPVVY
Sbjct: 1   MDLTPAISTAVAAITTGGGPVKSPELDTDTPIKIQPTTKSHPFTNGVLKRPHHTPPPVVY 60

Query: 61  KECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIATPT 120
           KECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIATPT
Sbjct: 61  KECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIATPT 120

Query: 121 TTHIIEYQPHHRHHPPPPAANRSPSSASPPPISSSYYPSAPHMLLALSGGLPENASGGFH 180
           TTHIIEYQPHHRHHPPPPAANRSPSSASPPPISSSYYPSAPHMLLALSGGLPENASGGFH
Sbjct: 121 TTHIIEYQPHHRHHPPPPAANRSPSSASPPPISSSYYPSAPHMLLALSGGLPENASGGFH 180

Query: 181 HSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSNVGVDRGVLK 240
           HSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFC N+GVDRGVLK
Sbjct: 181 HSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCRNIGVDRGVLK 240

Query: 241 VWMHNNKNTLGKKDGTQNTNGSGGDGDGDGDEKMNGGNEPHAAANGSSSSS 292
           VWMHNNKNTLGKKDG QNTNGSG    GDGDEKMNGG+EPHAAANGSSSSS
Sbjct: 241 VWMHNNKNTLGKKDGAQNTNGSG----GDGDEKMNGGSEPHAAANGSSSSS 287

[Close]

BLAST of CmoCh14G006010 vs. ExPASy TrEMBL
Match: A0A0A0LFA1 (ZF-HD dimerization-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G826680 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.1e-140
Identity = 260/300 (86.67%), Postives = 275/300 (91.67%), Query Frame = 0


Query: 1   MDLTPAISTAVAAITTGGGPVKSPELDTDTPIKIQPTTKSHPFTNGVLKRHHNT---PPP 60
           MDLTPAISTA A I+TGGG VKSPEL+++TPIKIQPTTKSHPFTNGVLKRHH+T   PP 
Sbjct: 1   MDLTPAISTAAATISTGGGAVKSPELESETPIKIQPTTKSHPFTNGVLKRHHHTAPPPPQ 60

Query: 61  VVYKECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIA 120
           VVYKECLKNHAASLG HALDGCGEFMPS TATA+DPTSLKCAACGCHRNFHRREP+D IA
Sbjct: 61  VVYKECLKNHAASLGGHALDGCGEFMPSPTATATDPTSLKCAACGCHRNFHRREPDDPIA 120

Query: 121 TPTTTHIIEYQPHHRHHPPPP----AANRSPSSASPPPISSSYYPSAPHMLLALSGGLPE 180
           TPTTTH+IEYQPHHRHHPPPP    AA+RSPSSASPPPISSSYYPSAPHMLLALSG LPE
Sbjct: 121 TPTTTHVIEYQPHHRHHPPPPSTAAAAHRSPSSASPPPISSSYYPSAPHMLLALSGVLPE 180

Query: 181 NA--SGGFHHSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSN 240
           NA   GGFHH+ILTPSPNSRKRFRTKFTQNQKE+MYEFAEKVGWKIQKRDEDMIQEFCS+
Sbjct: 181 NAGGGGGFHHTILTPSPNSRKRFRTKFTQNQKERMYEFAEKVGWKIQKRDEDMIQEFCSD 240

Query: 241 VGVDRGVLKVWMHNNKNTLGKKDGTQNTNGSGGDGDGDGDEKMNGGNEPHAAANGSSSSS 292
           VGVDRGVLKVWMHNNKNTLGKKDG +N NGSG  G+GDGDEK+NGG EPHA  NGSSSSS
Sbjct: 241 VGVDRGVLKVWMHNNKNTLGKKDGGRNMNGSG--GEGDGDEKINGGGEPHATTNGSSSSS 298

[Close]

BLAST of CmoCh14G006010 vs. ExPASy TrEMBL
Match: A0A5D3DPZ4 (Zinc-finger homeodomain protein 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008070 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 3.6e-139
Identity = 258/300 (86.00%), Postives = 274/300 (91.33%), Query Frame = 0


Query: 1   MDLTPAISTAVAAITTGGGPVKSPELDTDTPIKIQPTTKSHPFTNGVLKRHHN---TPPP 60
           MDLTPAISTA   I+TGGG VKSPELD++TPIKIQPTTKS PFTNGVLKRHH+    PP 
Sbjct: 1   MDLTPAISTAAPTISTGGGAVKSPELDSETPIKIQPTTKSLPFTNGVLKRHHHIAPPPPQ 60

Query: 61  VVYKECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIA 120
           VVYKECLKNHAASLG HALDGCGEFMPS TATA+DPTSLKCAACGCHRNFHRREP+D IA
Sbjct: 61  VVYKECLKNHAASLGGHALDGCGEFMPSPTATATDPTSLKCAACGCHRNFHRREPDDPIA 120

Query: 121 TPTTTHIIEYQPHHRHHPPPP----AANRSPSSASPPPISSSYYPSAPHMLLALSGGLPE 180
           TPTTTH+IEYQPHHRHHPPPP    AA+RSPSSASPPPISSSYYPSAPHMLLALSG LPE
Sbjct: 121 TPTTTHVIEYQPHHRHHPPPPPTAAAAHRSPSSASPPPISSSYYPSAPHMLLALSGVLPE 180

Query: 181 NA--SGGFHHSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSN 240
           NA   GGFHHSI+TPSPNSRKRFRTKFTQNQKE+MYEFAEKVGWKIQKRDEDMIQEFCS+
Sbjct: 181 NAGSGGGFHHSIMTPSPNSRKRFRTKFTQNQKERMYEFAEKVGWKIQKRDEDMIQEFCSD 240

Query: 241 VGVDRGVLKVWMHNNKNTLGKKDGTQNTNGSGGDGDGDGDEKMNGGNEPHAAANGSSSSS 292
           VGVDRGVLKVWMHNNKNTLGKKDG++N NGSG  G+GDGD+K+NGG EPHA ANGSSSSS
Sbjct: 241 VGVDRGVLKVWMHNNKNTLGKKDGSRNMNGSG--GEGDGDDKINGGGEPHATANGSSSSS 298

[Close]

BLAST of CmoCh14G006010 vs. ExPASy TrEMBL
Match: A0A1S3B7H7 (zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103487005 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 3.6e-139
Identity = 258/300 (86.00%), Postives = 274/300 (91.33%), Query Frame = 0


Query: 1   MDLTPAISTAVAAITTGGGPVKSPELDTDTPIKIQPTTKSHPFTNGVLKRHHN---TPPP 60
           MDLTPAISTA   I+TGGG VKSPELD++TPIKIQPTTKS PFTNGVLKRHH+    PP 
Sbjct: 1   MDLTPAISTAAPTISTGGGAVKSPELDSETPIKIQPTTKSLPFTNGVLKRHHHIAPPPPQ 60

Query: 61  VVYKECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIA 120
           VVYKECLKNHAASLG HALDGCGEFMPS TATA+DPTSLKCAACGCHRNFHRREP+D IA
Sbjct: 61  VVYKECLKNHAASLGGHALDGCGEFMPSPTATATDPTSLKCAACGCHRNFHRREPDDPIA 120

Query: 121 TPTTTHIIEYQPHHRHHPPPP----AANRSPSSASPPPISSSYYPSAPHMLLALSGGLPE 180
           TPTTTH+IEYQPHHRHHPPPP    AA+RSPSSASPPPISSSYYPSAPHMLLALSG LPE
Sbjct: 121 TPTTTHVIEYQPHHRHHPPPPPTAAAAHRSPSSASPPPISSSYYPSAPHMLLALSGVLPE 180

Query: 181 NA--SGGFHHSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSN 240
           NA   GGFHHSI+TPSPNSRKRFRTKFTQNQKE+MYEFAEKVGWKIQKRDEDMIQEFCS+
Sbjct: 181 NAGSGGGFHHSIMTPSPNSRKRFRTKFTQNQKERMYEFAEKVGWKIQKRDEDMIQEFCSD 240

Query: 241 VGVDRGVLKVWMHNNKNTLGKKDGTQNTNGSGGDGDGDGDEKMNGGNEPHAAANGSSSSS 292
           VGVDRGVLKVWMHNNKNTLGKKDG++N NGSG  G+GDGD+K+NGG EPHA ANGSSSSS
Sbjct: 241 VGVDRGVLKVWMHNNKNTLGKKDGSRNMNGSG--GEGDGDDKINGGGEPHATANGSSSSS 298

[Close]

BLAST of CmoCh14G006010 vs. TAIR 10
Match: AT3G28920.1 (homeobox protein 34 )

HSP 1 Score: 290.8 bits (743), Expect = 1.2e-78
Identity = 174/310 (56.13%), Postives = 207/310 (66.77%), Query Frame = 0


Query: 22  KSPELDTDTPIKIQPTTKSHPFTNGVLKR---HHNTPPPVVYKECLKNHAASLGAHALDG 81
           KSPE +++TP +IQP  K   F+NG++KR   HH+    V YKECLKNHAA++G HALDG
Sbjct: 12  KSPEPESETPTRIQP-AKPISFSNGIIKRHHHHHHNNNKVTYKECLKNHAAAIGGHALDG 71

Query: 82  CGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIATP--------TTTHIIEYQPH 141
           CGEFMPS ++T SDPTSLKCAACGCHRNFHRRE +DS A P        TTT  IEYQPH
Sbjct: 72  CGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDDSSAVPPPSLLPSSTTTAAIEYQPH 131

Query: 142 HRHHPPPPAA---NRSPSSASPPPISSSYYPSAPHMLLALSGGLPE------NASGGFHH 201
           HRHHPPPP A    RSP+S+SPPPISSSY      MLLALSG          N +   +H
Sbjct: 132 HRHHPPPPLAPPLPRSPNSSSPPPISSSY------MLLALSGNNKTAPFSDLNFAAAANH 191

Query: 202 SILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSNVGVDRGVLKV 261
             L+ +P SRKRFRTKF+ NQKEKM+EFA+++GWKIQKRDED +++FC  +GVD+GVLKV
Sbjct: 192 --LSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRDEDEVRDFCREIGVDKGVLKV 251

Query: 262 WMHNNKNTL-----GKKDGTQNTNGSGG-------------DGDGDGD--EKMNGGNEPH 292
           WMHNNKN+      G     +N NG GG             DGDG G   E  +GG +  
Sbjct: 252 WMHNNKNSFKFSGGGATTVQRNDNGIGGENSNDDGVRGLANDGDGGGGRFESDSGGADGG 311

[Close]

BLAST of CmoCh14G006010 vs. TAIR 10
Match: AT5G39760.1 (homeobox protein 23 )

HSP 1 Score: 279.3 bits (713), Expect = 3.6e-75
Identity = 167/320 (52.19%), Postives = 207/320 (64.69%), Query Frame = 0


Query: 1   MDLTPAISTAVAAITTGGGPVKSPELDTDTPIKIQPTTKSHPFTNGVLKRHHNTPPPVV- 60
           MD+TP I+T     TT   P KSPE +++TP +IQP  K   F+NG++KRHH+   P++ 
Sbjct: 2   MDMTPTITT-----TTTPTP-KSPEPESETPTRIQP-AKPISFSNGIIKRHHHHHHPLLF 61

Query: 61  -YKECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPED---- 120
            YKECLKNHAA+LG HALDGCGEFMPS ++ +SDPTSLKCAACGCHRNFHRR+P++    
Sbjct: 62  TYKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNNDS 121

Query: 121 SIATPTTTHIIEYQPHHRHH---PPPPAANRSPSSASPPPISSSYYPSAPHMLLALSG-- 180
           S   P  +  +EYQPHHRHH   PPPP   RSP+SASPPPISSSY      MLL+LSG  
Sbjct: 122 SQIPPPPSTAVEYQPHHRHHPPPPPPPPPPRSPNSASPPPISSSY------MLLSLSGTN 181

Query: 181 ----------GLPENASGGFHHSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQK 240
                      L  +A    HH        SRKRFRTKF+Q QKEKM+EFAE+VGWK+QK
Sbjct: 182 NNNNNLASFSDLNFSAGNNHHHHHQHTLHGSRKRFRTKFSQFQKEKMHEFAERVGWKMQK 241

Query: 241 RDEDMIQEFCSNVGVDRGVLKVWMHNNKNTLGKKDGTQN-----TNGSGG---------D 286
           RDED +++FC  +GVD+ VLKVWMHNNKNT  ++D   N      NG G          +
Sbjct: 242 RDEDDVRDFCRQIGVDKSVLKVWMHNNKNTFNRRDIAGNEIRQIDNGGGNHTPILAGEIN 301

[Close]

BLAST of CmoCh14G006010 vs. TAIR 10
Match: AT5G15210.1 (homeobox protein 30 )

HSP 1 Score: 228.0 bits (580), Expect = 9.6e-60
Identity = 140/272 (51.47%), Postives = 172/272 (63.24%), Query Frame = 0


Query: 11  VAAITTGGGPVKSPELDTDTPIKIQPTTKSHPFTNGVLKRHHNTPPPVV----YKECLKN 70
           +A  TT    + S + + + PI+IQP  K   F+NG    HH+     V    YKECLKN
Sbjct: 4   IATTTTIVSDLDSRQPEIEAPIRIQP-AKPISFSNGKRCHHHHLASEAVAVATYKECLKN 63

Query: 71  HAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIATPTTTHIIE 130
           HAA +G HALDGCGEFMPS +  ++DP SL CAACGCHRNFHRRE ED  +       IE
Sbjct: 64  HAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRRE-EDPSSLSAIVPAIE 123

Query: 131 YQPHHRHHPPPP-----AANRSP---SSASPPPISSSYYPSAPHMLLALSGGLPENASGG 190
           ++PH+RH  PPP     A  RSP    SASPPPISSSY      MLLALSGG      GG
Sbjct: 124 FRPHNRHQLPPPPPPHLAGIRSPDDDDSASPPPISSSY------MLLALSGG-----RGG 183

Query: 191 FHHSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSNVGVDRGV 250
            +    T  P SRKRFRTKF+Q QKEKM+EF+E+VGW++ K D+ +++EFC  +GVD+ V
Sbjct: 184 AN----TAVPMSRKRFRTKFSQYQKEKMFEFSERVGWRMPKADDVVVKEFCREIGVDKSV 243

Query: 251 LKVWMHNNKNTLGKKDGTQNTNGS---GGDGD 268
            KVWMHNNK  +  + G +  NG    GG GD
Sbjct: 244 FKVWMHNNK--ISGRSGARRANGGVVVGGVGD 256

[Close]

BLAST of CmoCh14G006010 vs. TAIR 10
Match: AT1G69600.1 (zinc finger homeodomain 1 )

HSP 1 Score: 189.9 bits (481), Expect = 2.9e-48
Identity = 114/223 (51.12%), Postives = 138/223 (61.88%), Query Frame = 0


Query: 58  VVYKECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIA 117
           V YKECLKNHAA+LG HALDGCGEFMPS TAT++DP+SL+CAACGCHRNFHRR+P +++ 
Sbjct: 29  VCYKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCHRNFHRRDPSENLN 88

Query: 118 TPTTTHIIEYQPHHRHHPPPPAANRSPSSASPPPISSSYYPSAP--HMLLALSGGLPENA 177
             T   I            P      PS     P+  SYY SAP  H++L+LS G P  +
Sbjct: 89  FLTAPPI----------SSPSGTESPPSRHVSSPVPCSYYTSAPPHHVILSLSSGFPGPS 148

Query: 178 SGGFHHSILTPSPNS-----RKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCS 237
                   +  S NS     RKR RTKFT  QK KM  FAEK GWKI   DE  ++EFC+
Sbjct: 149 D---QDPTVVRSENSSRGAMRKRTRTKFTPEQKIKMRAFAEKAGWKINGCDEKSVREFCN 208

Query: 238 NVGVDRGVLKVWMHNNKNTL--GKKDGTQ-----NTNGSGGDG 267
            VG++RGVLKVWMHNNK +L  GK    +     NT+ + GDG
Sbjct: 209 EVGIERGVLKVWMHNNKYSLLNGKIREIEHGLCLNTHSNDGDG 238

[Close]

BLAST of CmoCh14G006010 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 )

HSP 1 Score: 164.1 bits (414), Expect = 1.7e-40
Identity = 96/208 (46.15%), Postives = 121/208 (58.17%), Query Frame = 0


Query: 46  GVLKRHHNTPPPVVYKECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHR 105
           G + R       + Y+ECLKNHA ++G HA+DGC EFMPS      D  +LKCAACGCHR
Sbjct: 35  GGVGRSKGVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLD--ALKCAACGCHR 94

Query: 106 NFHRREPEDSIATPTTTHIIEYQPHHRHHPPPPAANRSPSSASPPPISSSYYPSAPHMLL 165
           NFHR+E E SI               R H  P   NR P    PP       P+AP+   
Sbjct: 95  NFHRKETE-SIG-------------GRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPP 154

Query: 166 ALSGGLPENASGGFHHSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMI 225
           A SG   + ++        + S  + KRFRTKFT  QKEKM  FAE++GW+IQK D+  +
Sbjct: 155 AASGDEEDTSNP-------SSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAV 214

Query: 226 QEFCSNVGVDRGVLKVWMHNNKNTLGKK 254
           ++FC+  GV R VLK+WMHNNKN+LGKK
Sbjct: 215 EQFCAETGVRRQVLKIWMHNNKNSLGKK 219

The following BLAST results are available for this feature:

BLAST of CmoCh14G006010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHF0	1.7e-77	56.13	Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 S...	[more]
Q9FIW9	5.1e-74	52.19	Zinc-finger homeodomain protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZHD10 PE=1...	[more]
Q9LXG0	1.4e-58	51.47	Zinc-finger homeodomain protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZHD8 PE=1 S...	[more]
Q9SEZ1	4.1e-47	51.12	Zinc-finger homeodomain protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZHD11 PE=1...	[more]
Q6ER21	7.7e-46	46.25	Zinc-finger homeodomain protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=ZH...	[more]

BLAST of CmoCh14G006010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F1H4	1.2e-163	100.00	zinc-finger homeodomain protein 9-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1J3I4	3.3e-156	96.56	zinc-finger homeodomain protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC1114823...	[more]
A0A0A0LFA1	1.1e-140	86.67	ZF-HD dimerization-type domain-containing protein OS=Cucumis sativus OX=3659 GN=...	[more]
A0A5D3DPZ4	3.6e-139	86.00	Zinc-finger homeodomain protein 9-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3B7H7	3.6e-139	86.00	zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103487005 P...	[more]

BLAST of CmoCh14G006010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28920.1	1.2e-78	56.13	homeobox protein 34	[more]
AT5G39760.1	3.6e-75	52.19	homeobox protein 23	[more]
AT5G15210.1	9.6e-60	51.47	homeobox protein 30	[more]
AT1G69600.1	2.9e-48	51.12	zinc finger homeodomain 1	[more]
AT4G24660.1	1.7e-40	46.15	homeobox protein 22	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAM	TIGR01566	TIGR01566	coord: 60..111 e-value: 4.9E-31 score: 104.9
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 58..112 e-value: 6.1E-29 score: 100.2
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROSITE	PS51523	ZF_HD_DIMER	coord: 60..111 score: 26.592375
None	No IPR available	GENE3D	1.10.10.60		coord: 183..252 e-value: 9.2E-33 score: 113.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..44
None	No IPR available	PANTHER	PTHR31948:SF102	HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN	coord: 1..260
None	No IPR available	PANTHER	PTHR31948	ZINC-FINGER HOMEODOMAIN PROTEIN 2	coord: 1..260
IPR006455	Homeodomain, ZF-HD class	TIGRFAM	TIGR01565	TIGR01565	coord: 191..248 e-value: 1.3E-26 score: 90.3
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 184..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G006010.1	CmoCh14G006010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding