CmoCh14G005210 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G005210
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Two-component response regulator
Location	Cmo_Chr14: 2633524 .. 2635328 (+)
RNA-Seq Expression	CmoCh14G005210
Synteny	CmoCh14G005210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAAAAAATAAAAAAATTCGGAAGATTTGCAACAAAATGCGGTCGGATCTTGCTTCGTGAGATGTTAATCGTGGTGGGTCATTTTTTTTCCCCCTCCTCCCTTCCTCTTAAAACCAACGCAAACCCACCAATTTCCCACTCTCTCCTCTCTCTCTCTCTCTGATTCTGAATTTGGGGCAATCATGGTTATGGCTGCCGATTCTCAGTTCCATGTTCTTGCCGTCGATGATAGCCTCATAGATAGGAAGCTCATCGAGAGGCTGCTCAAAACCTCCTCATATCAAGGTATTTTTCTATGTTCTTTCTTTTTTAATTTTGTATATTACATATACAAAATCCAATTTCTGTTTGTGTAGGAATTGGTTTGGTGAATTCTTTGTTTGATTTGGTTTCTGTAGTTACTACGGTTGATTCAGGGAGCAAGGCCTTGGAATTTCTGGGTTTGATTGAAGAACATCAGCGTACAAACTTCAAATCTCCTTCTTCTTCTTCTTCTTCCTCCTCGAACATTCATCATCAGGTTATTCTATTTCGGATTTGGATTCGTTCTTTTTCATTCCATTTTCTTCTTCTGTTTCTGAAATTTTGTGAGTTTTTGTTTTCAGGAAGTGGAAGTGAATCTTATCATTACTGATTACTGCATGCCTGGGATGACTGGCTTCGATTTGCTCAAGAAAGTTAAGGTAAGAGGGAAATAAATAAAGGTCGAAGTTCTATAGTTTCTTAGTTCTACTCTTTGTTGTTGCTGTTGTTCTTCTTCTTTCTCTTTTTTTTTTTTGGATTTTTCTGAAGAATGCGTTTGTCAACCCGCCACTTGTTTGAGGAAAATTCTCAGAGAATATTTTCTCACTAACTTTCTTTTGTTTCCTTTCTAGTCAATTAGATCTGTGTTATGCTGTTATTCTCAATACTTTCCTGGAAAATCTGTTTTTCTCTGGAAACAAACAGAACTAGTTAGGAATTTGCCTAATCACTACTCCTGAAACTTTCCTGGAAAATCTGTTTTTCTCTGAAAAAAAAAGAACTAGTTAGGAATTTGCCTAATCACTACTCCTGAAACTTTCCTGGAAAATCTGTTTTTCTCTGGAAACAAACAGAGAGACTAGTTAGGAATTTGTCTAATTACTACGTCTGGAACTTAACTGGAAAATCTGTTTTCCTTGAAAAACAAACAAACACAAACAGAGGACAAATGAATGGACGTAAATCTAACAATTTCTGTGAATTTGCAGGAATCGACGTCTCTTAGAAACATACCAGTGGTGATAATGTCATCCGAAAACTTACCTTCGAGAATCAGCAGGTAAGGAATCAAGAATCGATTTGCAATTTCTTCTTTTATGGATCGATCTCTGATATCGCTTGATCAGAAACTTATGTAATTGGATTTGATTGATGTTCGAAGCAGATGTTTAGAAGAAGGCGCGGAAGAGTTCTTCCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCGCACATAATGAAGACGAAATTAAAGGATCAAAATCAAGAAGAAGAAGAAGAAACAACAGAGACCGAATTCGAATCGGTTGAAAAACAACAACAACAACAGATTCAAATGAACAGTAGCAACAAGAGAAAGGCGGGGATGGATGAAGAAGGTGTAGGAGAGGACAGAAGAAGAAGAATAAGGTACAATAGCAATGGCGTCGCGACTGTGAATTGATCGTGTTGATTAATGGTGAGGCGCCATGAGAGAAATTGTACATAGAGGTTCTGAAAATTAGAGGAAGTTTTTTTTTTTTCTTTTCTTTTTTTACTATGGAGATTTGTT

mRNA sequence

AAATAAAAAAATAAAAAAATTCGGAAGATTTGCAACAAAATGCGGTCGGATCTTGCTTCGTGAGATGTTAATCGTGGTGGGTCATTTTTTTTCCCCCTCCTCCCTTCCTCTTAAAACCAACGCAAACCCACCAATTTCCCACTCTCTCCTCTCTCTCTCTCTCTGATTCTGAATTTGGGGCAATCATGGTTATGGCTGCCGATTCTCAGTTCCATGTTCTTGCCGTCGATGATAGCCTCATAGATAGGAAGCTCATCGAGAGGCTGCTCAAAACCTCCTCATATCAAGTTACTACGGTTGATTCAGGGAGCAAGGCCTTGGAATTTCTGGGTTTGATTGAAGAACATCAGCGTACAAACTTCAAATCTCCTTCTTCTTCTTCTTCTTCCTCCTCGAACATTCATCATCAGGAAGTGGAAGTGAATCTTATCATTACTGATTACTGCATGCCTGGGATGACTGGCTTCGATTTGCTCAAGAAAGTTAAGGAATCGACGTCTCTTAGAAACATACCAGTGGTGATAATGTCATCCGAAAACTTACCTTCGAGAATCAGCAGATGTTTAGAAGAAGGCGCGGAAGAGTTCTTCCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCGCACATAATGAAGACGAAATTAAAGGATCAAAATCAAGAAGAAGAAGAAGAAACAACAGAGACCGAATTCGAATCGGTTGAAAAACAACAACAACAACAGATTCAAATGAACAGTAGCAACAAGAGAAAGGCGGGGATGGATGAAGAAGGTGTAGGAGAGGACAGAAGAAGAAGAATAAGGTACAATAGCAATGGCGTCGCGACTGTGAATTGATCGTGTTGATTAATGGTGAGGCGCCATGAGAGAAATTGTACATAGAGGTTCTGAAAATTAGAGGAAGTTTTTTTTTTTTCTTTTCTTTTTTTACTATGGAGATTTGTT

Coding sequence (CDS)

ATGGTTATGGCTGCCGATTCTCAGTTCCATGTTCTTGCCGTCGATGATAGCCTCATAGATAGGAAGCTCATCGAGAGGCTGCTCAAAACCTCCTCATATCAAGTTACTACGGTTGATTCAGGGAGCAAGGCCTTGGAATTTCTGGGTTTGATTGAAGAACATCAGCGTACAAACTTCAAATCTCCTTCTTCTTCTTCTTCTTCCTCCTCGAACATTCATCATCAGGAAGTGGAAGTGAATCTTATCATTACTGATTACTGCATGCCTGGGATGACTGGCTTCGATTTGCTCAAGAAAGTTAAGGAATCGACGTCTCTTAGAAACATACCAGTGGTGATAATGTCATCCGAAAACTTACCTTCGAGAATCAGCAGATGTTTAGAAGAAGGCGCGGAAGAGTTCTTCCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCGCACATAATGAAGACGAAATTAAAGGATCAAAATCAAGAAGAAGAAGAAGAAACAACAGAGACCGAATTCGAATCGGTTGAAAAACAACAACAACAACAGATTCAAATGAACAGTAGCAACAAGAGAAAGGCGGGGATGGATGAAGAAGGTGTAGGAGAGGACAGAAGAAGAAGAATAAGGTACAATAGCAATGGCGTCGCGACTGTGAATTGA

Protein sequence

MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFKSPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLPSRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEEEETTETEFESVEKQQQQQIQMNSSNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN

Homology

[Close]

BLAST of CmoCh14G005210 vs. ExPASy Swiss-Prot
Match: O80366 (Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-59
Identity = 145/242 (59.92%), Postives = 172/242 (71.07%), Query Frame = 0


Query: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK 60
           M MAA+SQFHVLAVDDSL DRKLIERLL+ SS QVTTVDSGSKALEFLGL    Q T+  
Sbjct: 1   MGMAAESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGL---RQSTDSN 60

Query: 61  SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120
            P++ S +   ++HQ VEVNLIITDYCMPGMTG+DLLKKVKES++ R+IPVVIMSSEN+P
Sbjct: 61  DPNAFSKAP--VNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVP 120

Query: 121 SRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEEEET------------- 180
           +RISRCLEEGAEEFFLKPVRL D+NKLKPH+MKTKLK+Q  EE E T             
Sbjct: 121 ARISRCLEEGAEEFFLKPVRLADLNKLKPHMMKTKLKNQKLEEIETTSKVENGVPTAVAD 180

Query: 181 ------TETEFESVEKQ------QQQQIQMNSSNKRKAGMDEEGVGEDRRRRIRYNSNGV 218
                 T  E E +  Q      QQ++  ++ +NKRK+   EEG+  DR R      +G+
Sbjct: 181 PEIKDSTNIEIEILPLQQDLLLVQQEEQTLSINNKRKS--VEEGISTDRARP---RFDGI 232

[Close]

BLAST of CmoCh14G005210 vs. ExPASy Swiss-Prot
Match: O80365 (Two-component response regulator ARR8 OS=Arabidopsis thaliana OX=3702 GN=ARR8 PE=1 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 5.6e-57
Identity = 140/229 (61.14%), Postives = 166/229 (72.49%), Query Frame = 0


Query: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK 60
           MVM  +S+FHVLAVDDSL DRK+IERLL+ SS QVTTVDSGSKALEFLGL     R +  
Sbjct: 1   MVMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGL-----RVDDN 60

Query: 61  SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120
            P++ S+S     HQEVE+NLIITDYCMPGMTG+DLLKKVKES + R+IPVVIMSSEN+P
Sbjct: 61  DPNALSTSPQ--IHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVP 120

Query: 121 SRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQN----------------QEEE 180
           +RISRCLEEGAEEFFLKPV+L D+ KLKPH+MKTKLK ++                +EEE
Sbjct: 121 ARISRCLEEGAEEFFLKPVKLADLTKLKPHMMKTKLKKESEKPVAIEEIVVSKPEIEEEE 180

Query: 181 EETTETEFESV--EKQQQQQIQMNSSNKRKAGMDEEGVGEDRRRRIRYN 212
           EE++  E   +  E + +Q   M SSNKRKA   EE V  DR R  +YN
Sbjct: 181 EESSVIEILPLHQEIESEQLEPMLSSNKRKA--MEEVVSTDRSRP-KYN 219

[Close]

BLAST of CmoCh14G005210 vs. ExPASy Swiss-Prot
Match: Q4GZK2 (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=RR9 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.4e-54
Identity = 121/200 (60.50%), Postives = 154/200 (77.00%), Query Frame = 0


Query: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK 60
           M +A ++ FHVLAVDDSL DRKLIERLLKTSS+QVTTVDSGSKALEFLGL  +H+     
Sbjct: 1   MAVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL-HDHE----D 60

Query: 61  SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120
           SP S+ S       QEV VNLIITDYCMPGMTG+DLLKK+KES+ LR+IPVVIMSS+N+P
Sbjct: 61  SPISTQSD-----QQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIP 120

Query: 121 SRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEE--EETTETEFESVEKQ 180
           SRI+RCLEEGA+EFFLKPVRL D++KLKPHI+K++ K+  Q+E+  +  +E+   S    
Sbjct: 121 SRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQNLQSNSESNNSSNPTS 180

Query: 181 QQQQIQMNSSNKRKAGMDEE 199
           +      +S++ ++  +DEE
Sbjct: 181 ENSSSSTSSNSHKRKAVDEE 190

[Close]

BLAST of CmoCh14G005210 vs. ExPASy Swiss-Prot
Match: Q2RAP3 (Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 GN=RR9 PE=2 SV=2)

HSP 1 Score: 213.0 bits (541), Expect = 3.4e-54
Identity = 121/200 (60.50%), Postives = 154/200 (77.00%), Query Frame = 0


Query: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK 60
           M +A ++ FHVLAVDDSL DRKLIERLLKTSS+QVTTVDSGSKALEFLGL  +H+     
Sbjct: 1   MAVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL-HDHE----D 60

Query: 61  SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120
           SP S+ S       QEV VNLIITDYCMPGMTG+DLLKK+KES+ LR+IPVVIMSS+N+P
Sbjct: 61  SPISTQSD-----QQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIP 120

Query: 121 SRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEE--EETTETEFESVEKQ 180
           SRI+RCLEEGA+EFFLKPVRL D++KLKPHI+K++ K+  Q+E+  +  +E+   S    
Sbjct: 121 SRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQNLQSNSESNNSSNPTS 180

Query: 181 QQQQIQMNSSNKRKAGMDEE 199
           +      +S++ ++  +DEE
Sbjct: 181 ENSSSSTSSNSHKRKAVDEE 190

[Close]

BLAST of CmoCh14G005210 vs. ExPASy Swiss-Prot
Match: B8BLZ4 (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN=RR10 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 9.9e-54
Identity = 120/200 (60.00%), Postives = 154/200 (77.00%), Query Frame = 0


Query: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK 60
           M +A ++ FHVLAVDDSL DRKLIERLLKTSS+QVTTVDSGSKALEFLGL  +H+     
Sbjct: 1   MAVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL-HDHE----D 60

Query: 61  SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120
           SP S+ S       QEV VNLIITDYCMPGMTG+DLLKK+KES+ LR+IPVVIMSS+N+P
Sbjct: 61  SPISTQSD-----QQEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIP 120

Query: 121 SRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEE--EETTETEFESVEKQ 180
           SRI+RCLEEGA+EFFLKPVRL D++KLKPHI+K++ K+  Q+E+  +  +E+   S    
Sbjct: 121 SRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQHLQSNSESNNSSNPTS 180

Query: 181 QQQQIQMNSSNKRKAGMDEE 199
           +      ++++ ++  +DEE
Sbjct: 181 ENSSSSTSTNSHKRKAVDEE 190

[Close]

BLAST of CmoCh14G005210 vs. ExPASy TrEMBL
Match: A0A6J1F120 (two-component response regulator ARR9 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441410 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.3e-112
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK 60
           MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK
Sbjct: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK 60

Query: 61  SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120
           SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP
Sbjct: 61  SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120

Query: 121 SRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEEEETTETEFESVEKQQQ 180
           SRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEEEETTETEFESVEKQQQ
Sbjct: 121 SRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEEEETTETEFESVEKQQQ 180

Query: 181 QQIQMNSSNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN 220
           QQIQMNSSNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN
Sbjct: 181 QQIQMNSSNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN 219

[Close]

BLAST of CmoCh14G005210 vs. ExPASy TrEMBL
Match: A0A6J1F6V6 (two-component response regulator ARR9 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441410 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK 60
           MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK
Sbjct: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK 60

Query: 61  SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120
           SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP
Sbjct: 61  SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120

Query: 121 SRI-SRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEEEETTETEFESVEKQQ 180
           SRI SRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEEEETTETEFESVEKQQ
Sbjct: 121 SRISSRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEEEETTETEFESVEKQQ 180

Query: 181 QQQIQMNSSNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN 220
           QQQIQMNSSNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN
Sbjct: 181 QQQIQMNSSNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN 220

[Close]

BLAST of CmoCh14G005210 vs. ExPASy TrEMBL
Match: A0A6J1J8R0 (two-component response regulator ORR9 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482353 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.8e-106
Identity = 214/222 (96.40%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK 60
           MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQ TNFK
Sbjct: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQHTNFK 60

Query: 61  SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120
           SP SSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP
Sbjct: 61  SP-SSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120

Query: 121 SRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQ--EEEEETTETEFESVEK- 180
           SRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTK KDQNQ  EEEEETTETEFES+EK 
Sbjct: 121 SRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKFKDQNQEEEEEEETTETEFESIEKQ 180

Query: 181 QQQQQIQMNSSNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN 220
           QQQQQIQMNS+NKRKAGMDEEGVGEDRRRRIRYNSNGVATVN
Sbjct: 181 QQQQQIQMNSNNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN 221

[Close]

BLAST of CmoCh14G005210 vs. ExPASy TrEMBL
Match: A0A6J1J8X8 (two-component response regulator ORR9 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482353 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.2e-104
Identity = 214/223 (95.96%), Postives = 216/223 (96.86%), Query Frame = 0


Query: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK 60
           MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQ TNFK
Sbjct: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQHTNFK 60

Query: 61  SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120
           SP SSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP
Sbjct: 61  SP-SSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120

Query: 121 SRI-SRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQ--EEEEETTETEFESVEK 180
           SRI SRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTK KDQNQ  EEEEETTETEFES+EK
Sbjct: 121 SRISSRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKFKDQNQEEEEEEETTETEFESIEK 180

Query: 181 -QQQQQIQMNSSNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN 220
            QQQQQIQMNS+NKRKAGMDEEGVGEDRRRRIRYNSNGVATVN
Sbjct: 181 QQQQQQIQMNSNNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN 222

[Close]

BLAST of CmoCh14G005210 vs. ExPASy TrEMBL
Match: A0A1S3B7P3 (two-component response regulator ORR9-like OS=Cucumis melo OX=3656 GN=LOC103486897 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.3e-84
Identity = 180/233 (77.25%), Postives = 197/233 (84.55%), Query Frame = 0


Query: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK 60
           MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLI+EHQ TNFK
Sbjct: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIQEHQPTNFK 60

Query: 61  SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120
           S S+SS SSSN HHQEVEVNLIITDYCMPGMTGFDLLKKVKESTS RNIPVVIMSSEN+P
Sbjct: 61  SSSNSSFSSSNNHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSRRNIPVVIMSSENVP 120

Query: 121 SRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLK-DQNQEEEEETTETEFESVEKQQ 180
           SRI+RCLEEGAEEFFLKPVRLCDVNKLKPH+MKTK+K DQN+EEEE  TETE +SV+++Q
Sbjct: 121 SRINRCLEEGAEEFFLKPVRLCDVNKLKPHMMKTKVKEDQNREEEESRTETELKSVQEEQ 180

Query: 181 QQQIQMNSSNKRKAGMDEEGVGED---------------RRRRIRYNSNGVAT 218
           ++      S KRK GM+EE  GE+               RRRR RY++N VAT
Sbjct: 181 EEIEFEMKSKKRKGGMEEEEEGEEEEEEEEEEGLEEEIRRRRRRRYSNNCVAT 233

[Close]

BLAST of CmoCh14G005210 vs. TAIR 10
Match: AT3G57040.1 (response regulator 9 )

HSP 1 Score: 230.7 bits (587), Expect = 1.1e-60
Identity = 145/242 (59.92%), Postives = 172/242 (71.07%), Query Frame = 0


Query: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK 60
           M MAA+SQFHVLAVDDSL DRKLIERLL+ SS QVTTVDSGSKALEFLGL    Q T+  
Sbjct: 1   MGMAAESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGL---RQSTDSN 60

Query: 61  SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120
            P++ S +   ++HQ VEVNLIITDYCMPGMTG+DLLKKVKES++ R+IPVVIMSSEN+P
Sbjct: 61  DPNAFSKAP--VNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVP 120

Query: 121 SRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEEEET------------- 180
           +RISRCLEEGAEEFFLKPVRL D+NKLKPH+MKTKLK+Q  EE E T             
Sbjct: 121 ARISRCLEEGAEEFFLKPVRLADLNKLKPHMMKTKLKNQKLEEIETTSKVENGVPTAVAD 180

Query: 181 ------TETEFESVEKQ------QQQQIQMNSSNKRKAGMDEEGVGEDRRRRIRYNSNGV 218
                 T  E E +  Q      QQ++  ++ +NKRK+   EEG+  DR R      +G+
Sbjct: 181 PEIKDSTNIEIEILPLQQDLLLVQQEEQTLSINNKRKS--VEEGISTDRARP---RFDGI 232

[Close]

BLAST of CmoCh14G005210 vs. TAIR 10
Match: AT2G41310.1 (response regulator 3 )

HSP 1 Score: 222.2 bits (565), Expect = 4.0e-58
Identity = 140/229 (61.14%), Postives = 166/229 (72.49%), Query Frame = 0


Query: 1   MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFK 60
           MVM  +S+FHVLAVDDSL DRK+IERLL+ SS QVTTVDSGSKALEFLGL     R +  
Sbjct: 1   MVMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGL-----RVDDN 60

Query: 61  SPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLP 120
            P++ S+S     HQEVE+NLIITDYCMPGMTG+DLLKKVKES + R+IPVVIMSSEN+P
Sbjct: 61  DPNALSTSPQ--IHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVP 120

Query: 121 SRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQN----------------QEEE 180
           +RISRCLEEGAEEFFLKPV+L D+ KLKPH+MKTKLK ++                +EEE
Sbjct: 121 ARISRCLEEGAEEFFLKPVKLADLTKLKPHMMKTKLKKESEKPVAIEEIVVSKPEIEEEE 180

Query: 181 EETTETEFESV--EKQQQQQIQMNSSNKRKAGMDEEGVGEDRRRRIRYN 212
           EE++  E   +  E + +Q   M SSNKRKA   EE V  DR R  +YN
Sbjct: 181 EESSVIEILPLHQEIESEQLEPMLSSNKRKA--MEEVVSTDRSRP-KYN 219

[Close]

BLAST of CmoCh14G005210 vs. TAIR 10
Match: AT1G59940.1 (response regulator 3 )

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-40
Identity = 83/146 (56.85%), Postives = 108/146 (73.97%), Query Frame = 0


Query: 8   QFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFKSPSSSSS 67
           Q HVLAVDDSL+DR +IERLL+ +S +VT VDSG +ALEFLGL ++     F        
Sbjct: 32  QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEF-------- 91

Query: 68  SSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLPSRISRCL 127
                    ++V+LIITDYCMPGMTG++LLKK+KESTS + +PVVIMSSEN+ +RI RCL
Sbjct: 92  -------DRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCL 151

Query: 128 EEGAEEFFLKPVRLCDVNKLKPHIMK 154
           EEGAE+F LKPV+L DV +L+ ++ +
Sbjct: 152 EEGAEDFLLKPVKLADVKRLRSYLTR 162

[Close]

BLAST of CmoCh14G005210 vs. TAIR 10
Match: AT3G48100.1 (response regulator 5 )

HSP 1 Score: 163.7 bits (413), Expect = 1.7e-40
Identity = 81/153 (52.94%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 3   MAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFKSP 62
           +A+    HVLAVDDS++DRK IERLL+ SS +VT VDS ++AL++LGL            
Sbjct: 19  LASPKLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL------------ 78

Query: 63  SSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLPSR 122
                ++S++  +++++NLI+TDY MPGMTG++LLKK+KES++ R IPVVIMSSEN+  R
Sbjct: 79  --DGENNSSVGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPR 138

Query: 123 ISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTK 156
           I RCLEEGAE+F LKPV+L DV +L+  +MK +
Sbjct: 139 IDRCLEEGAEDFLLKPVKLADVKRLRDSLMKAE 157

[Close]

BLAST of CmoCh14G005210 vs. TAIR 10
Match: AT2G40670.1 (response regulator 16 )

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-40
Identity = 83/150 (55.33%), Postives = 114/150 (76.00%), Query Frame = 0


Query: 6   DSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFKSPSSS 65
           D + HVLAVDD+LIDRKL+ERLLK S  +VTT ++  +ALE+LGL +++Q  +       
Sbjct: 26  DEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHID------- 85

Query: 66  SSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLPSRISR 125
            + + N+    ++V+LIITDYCMPGMTGF+LLKKVKES++LR +PVVIMSSEN+P+RI++
Sbjct: 86  -ALTCNV----MKVSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINK 145

Query: 126 CLEEGAEEFFLKPVRLCDVNKLKPHIMKTK 156
           CL  GA+ F  KP++L DV KLK H+M  +
Sbjct: 146 CLASGAQMFMQKPLKLADVEKLKCHLMNCR 163

The following BLAST results are available for this feature:

BLAST of CmoCh14G005210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80366	1.6e-59	59.92	Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE...	[more]
O80365	5.6e-57	61.14	Two-component response regulator ARR8 OS=Arabidopsis thaliana OX=3702 GN=ARR8 PE...	[more]
Q4GZK2	3.4e-54	60.50	Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q2RAP3	3.4e-54	60.50	Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
B8BLZ4	9.9e-54	60.00	Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]

BLAST of CmoCh14G005210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F120	6.3e-112	100.00	two-component response regulator ARR9 isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1F6V6	1.6e-110	99.55	two-component response regulator ARR9 isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1J8R0	8.8e-106	96.40	two-component response regulator ORR9 isoform X2 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1J8X8	2.2e-104	95.96	two-component response regulator ORR9 isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A1S3B7P3	3.3e-84	77.25	two-component response regulator ORR9-like OS=Cucumis melo OX=3656 GN=LOC1034868...	[more]

BLAST of CmoCh14G005210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57040.1	1.1e-60	59.92	response regulator 9	[more]
AT2G41310.1	4.0e-58	61.14	response regulator 3	[more]
AT1G59940.1	1.3e-40	56.85	response regulator 3	[more]
AT3G48100.1	1.7e-40	52.94	response regulator 5	[more]
AT2G40670.1	2.2e-40	55.33	response regulator 16	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 153..173
None	No IPR available	GENE3D	3.40.50.2300		coord: 10..216 e-value: 6.8E-33 score: 116.7
None	No IPR available	PIRSR	PIRSR002937-1	PIRSR002937-1	coord: 75..187 e-value: 3.1E-8 score: 30.9 coord: 11..47 e-value: 400.0 score: -2.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..219
None	No IPR available	PANTHER	PTHR43874:SF81	TWO-COMPONENT RESPONSE REGULATOR ARR9	coord: 3..206
None	No IPR available	PANTHER	PTHR43874	TWO-COMPONENT RESPONSE REGULATOR	coord: 3..206
None	No IPR available	CDD	cd17581	REC_typeA_ARR	coord: 11..147 e-value: 3.14699E-75 score: 221.086
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 9..151 e-value: 4.1E-14 score: 62.9
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 11..141 e-value: 9.4E-17 score: 61.2
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 10..152 score: 31.026955
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 8..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G005210.1	CmoCh14G005210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity