CmoCh14G005080 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G005080
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	zinc finger protein 1-like
Location	Cmo_Chr14: 2515403 .. 2516080 (+)
RNA-Seq Expression	CmoCh14G005080
Synteny	CmoCh14G005080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTGTTCGGGCGAGTGCGAAGGTTCTGAGGTGGAACTTAACTTGAAACATTCTTTCAAGGTTTTGAAAGCGGAACCCGGCTTTGAAGAAGCCGGGACCGCTATGGGGACGGAGACAAGGACGAAGAGAGAAACCCGGGTTTTTTACTGCAAATTCTGCAGTAGAAAATTCTCAAATCTGCAGGCTTTGGGAGGACATCAAAACGCCCATAAACGAGAAAGAGACATTGCCAAAAGAGAGAAAGCCGTCGCCGCTGCCGCCGCCGCAATGAGCTTCAGAACCACCACCGCCGCCGCCGCCGCCGCAACTACTACGGGCGCGTTCGATTCCATTGGATCTTTTTACCATCCGTATTATTCGGCAATGGCGATTCACGCTCTGCGAAACAAAGCCCTAGGGTTTCCGATTCGGCCGCCGATTCGTAAACCGACTCGGCCCCAAGCCGTCGCCCATGGATGCCGGTGGTGGCCTAGAGAACAATACATGGCGGCGGCGCAGCAGTTACATTTTGGAGGTTTATGGCAAGCCGCCAACAATGGCGGAAGAGAGAATTTGGCGACAACTGAATTGGAATCCATAGCCATGGCGAGTAGAAACGCCACTTCTTCTTCTTCACAGATTTTTGGAGCCGATCAGTACAATATCCACGGCCTTGATTTGACCCTCAAACTTTAA

mRNA sequence

ATGGCTTGTTCGGGCGAGTGCGAAGGTTCTGAGGTGGAACTTAACTTGAAACATTCTTTCAAGGTTTTGAAAGCGGAACCCGGCTTTGAAGAAGCCGGGACCGCTATGGGGACGGAGACAAGGACGAAGAGAGAAACCCGGGTTTTTTACTGCAAATTCTGCAGTAGAAAATTCTCAAATCTGCAGGCTTTGGGAGGACATCAAAACGCCCATAAACGAGAAAGAGACATTGCCAAAAGAGAGAAAGCCGTCGCCGCTGCCGCCGCCGCAATGAGCTTCAGAACCACCACCGCCGCCGCCGCCGCCGCAACTACTACGGGCGCGTTCGATTCCATTGGATCTTTTTACCATCCGTATTATTCGGCAATGGCGATTCACGCTCTGCGAAACAAAGCCCTAGGGTTTCCGATTCGGCCGCCGATTCGTAAACCGACTCGGCCCCAAGCCGTCGCCCATGGATGCCGGTGGTGGCCTAGAGAACAATACATGGCGGCGGCGCAGCAGTTACATTTTGGAGGTTTATGGCAAGCCGCCAACAATGGCGGAAGAGAGAATTTGGCGACAACTGAATTGGAATCCATAGCCATGGCGAGTAGAAACGCCACTTCTTCTTCTTCACAGATTTTTGGAGCCGATCAGTACAATATCCACGGCCTTGATTTGACCCTCAAACTTTAA

Coding sequence (CDS)

ATGGCTTGTTCGGGCGAGTGCGAAGGTTCTGAGGTGGAACTTAACTTGAAACATTCTTTCAAGGTTTTGAAAGCGGAACCCGGCTTTGAAGAAGCCGGGACCGCTATGGGGACGGAGACAAGGACGAAGAGAGAAACCCGGGTTTTTTACTGCAAATTCTGCAGTAGAAAATTCTCAAATCTGCAGGCTTTGGGAGGACATCAAAACGCCCATAAACGAGAAAGAGACATTGCCAAAAGAGAGAAAGCCGTCGCCGCTGCCGCCGCCGCAATGAGCTTCAGAACCACCACCGCCGCCGCCGCCGCCGCAACTACTACGGGCGCGTTCGATTCCATTGGATCTTTTTACCATCCGTATTATTCGGCAATGGCGATTCACGCTCTGCGAAACAAAGCCCTAGGGTTTCCGATTCGGCCGCCGATTCGTAAACCGACTCGGCCCCAAGCCGTCGCCCATGGATGCCGGTGGTGGCCTAGAGAACAATACATGGCGGCGGCGCAGCAGTTACATTTTGGAGGTTTATGGCAAGCCGCCAACAATGGCGGAAGAGAGAATTTGGCGACAACTGAATTGGAATCCATAGCCATGGCGAGTAGAAACGCCACTTCTTCTTCTTCACAGATTTTTGGAGCCGATCAGTACAATATCCACGGCCTTGATTTGACCCTCAAACTTTAA

Protein sequence

MACSGECEGSEVELNLKHSFKVLKAEPGFEEAGTAMGTETRTKRETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTTAAAAAATTTGAFDSIGSFYHPYYSAMAIHALRNKALGFPIRPPIRKPTRPQAVAHGCRWWPREQYMAAAQQLHFGGLWQAANNGGRENLATTELESIAMASRNATSSSSQIFGADQYNIHGLDLTLKL

Homology

[Close]

BLAST of CmoCh14G005080 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-08
Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 34  TAMGTETRTKRETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAVAAAAAA 91
           T++  E+ T  E ++F C +C R F + QALGGHQNAHKRER +AKR + +AA+A+A
Sbjct: 46  TSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASA 102

[Close]

BLAST of CmoCh14G005080 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-07
Identity = 26/41 (63.41%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 40 TRTKRETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKR 81
          T+ +   RVF C +C RKF + QALGGHQNAHKRER +AKR
Sbjct: 50 TKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR 90

[Close]

BLAST of CmoCh14G005080 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.4e-07
Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 47 RVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREK 83
          R+F C FCSRKF + QALGGHQNAHK+ER  A+R K
Sbjct: 33 RIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAK 68

[Close]

BLAST of CmoCh14G005080 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06
Identity = 36/91 (39.56%), Postives = 48/91 (52.75%), Query Frame = 0


Query: 14  LNLKHSFKVLKAEPGFEEAGTAMGTETRTKRETRVFYCKFCSRKFSNLQALGGHQNAHKR 73
           L+L+ S   L      E +      + +     RVF C +C RKF + QALGGHQNAHKR
Sbjct: 50  LDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKR 109

Query: 74  ERDIAKREKAVAAAAAAMSFRTTTAAAAAAT 105
           ER +AKR   +  A       +++  AAAAT
Sbjct: 110 ERTLAKRAMRMGLAGVFPGRGSSSNYAAAAT 140

[Close]

BLAST of CmoCh14G005080 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06
Identity = 23/41 (56.10%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 45 ETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAVA 86
          E+R + C++C R+F+N QALGGHQNAHK+ER + KR + +A
Sbjct: 37 ESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLA 77

[Close]

BLAST of CmoCh14G005080 vs. ExPASy TrEMBL
Match: A0A6J1F842 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441732 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.4e-121
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MACSGECEGSEVELNLKHSFKVLKAEPGFEEAGTAMGTETRTKRETRVFYCKFCSRKFSN 60
           MACSGECEGSEVELNLKHSFKVLKAEPGFEEAGTAMGTETRTKRETRVFYCKFCSRKFSN
Sbjct: 1   MACSGECEGSEVELNLKHSFKVLKAEPGFEEAGTAMGTETRTKRETRVFYCKFCSRKFSN 60

Query: 61  LQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTTAAAAAATTTGAFDSIGSFYHPYY 120
           LQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTTAAAAAATTTGAFDSIGSFYHPYY
Sbjct: 61  LQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTTAAAAAATTTGAFDSIGSFYHPYY 120

Query: 121 SAMAIHALRNKALGFPIRPPIRKPTRPQAVAHGCRWWPREQYMAAAQQLHFGGLWQAANN 180
           SAMAIHALRNKALGFPIRPPIRKPTRPQAVAHGCRWWPREQYMAAAQQLHFGGLWQAANN
Sbjct: 121 SAMAIHALRNKALGFPIRPPIRKPTRPQAVAHGCRWWPREQYMAAAQQLHFGGLWQAANN 180

Query: 181 GGRENLATTELESIAMASRNATSSSSQIFGADQYNIHGLDLTLKL 226
           GGRENLATTELESIAMASRNATSSSSQIFGADQYNIHGLDLTLKL
Sbjct: 181 GGRENLATTELESIAMASRNATSSSSQIFGADQYNIHGLDLTLKL 225

[Close]

BLAST of CmoCh14G005080 vs. ExPASy TrEMBL
Match: A0A6J1J773 (zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481989 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.9e-89
Identity = 190/228 (83.33%), Postives = 198/228 (86.84%), Query Frame = 0


Query: 1   MACSGECEGSEVELNLKHSFKVLKAEPGFEEAGTAMGTETRTKRETRVFYCKFCSRKFSN 60
           MA S E EGS+VELNL+HSF   KAEPGF +A T MG E RTK+ETRVFYCKFCSRKFSN
Sbjct: 1   MASSVESEGSKVELNLQHSF---KAEPGFFKARTVMGMEMRTKKETRVFYCKFCSRKFSN 60

Query: 61  LQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTTAAAAAATTTGAFDSIGSFYHPYY 120
           LQALGGHQNAHKRERDIAKREKA AAAAAAMSFRTTT AA+AAT+T AFDSIGSFY+PYY
Sbjct: 61  LQALGGHQNAHKRERDIAKREKA-AAAAAAMSFRTTTTAASAATSTDAFDSIGSFYYPYY 120

Query: 121 SAMAIHALRNKALGFPIRP--PIRKPTRPQAVAHGCRWWPREQYM-AAAQQLHFGGLWQA 180
           SAMAIH+LRNKALGFPIRP   IRKPTRPQAVAHGCRWWPREQYM AAAQQLHF      
Sbjct: 121 SAMAIHSLRNKALGFPIRPQSTIRKPTRPQAVAHGCRWWPREQYMAAAAQQLHF------ 180

Query: 181 ANNGGRENLATTELESIAMASRNATSSSSQIFGADQYNIHGLDLTLKL 226
               GRENLA TELESIAMASRNA SSSSQIFGADQYNIHGLDLTLKL
Sbjct: 181 ----GRENLAATELESIAMASRNA-SSSSQIFGADQYNIHGLDLTLKL 213

[Close]

BLAST of CmoCh14G005080 vs. ExPASy TrEMBL
Match: A0A0A0LBM7 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819820 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 3.3e-55
Identity = 134/205 (65.37%), Postives = 147/205 (71.71%), Query Frame = 0


Query: 38  TETRTKRETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTT 97
           TET+TK ETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKA AA           
Sbjct: 35  TETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAA----------- 94

Query: 98  AAAAAATTTGAFDSIGSFYHPYYSAMAIHALRNKALGFPIRPP--IRKPTRPQ------- 157
           AAAA   TT AFDSIGSFYHPYYSAMAIH LRNK+ G PIRP   IRKP+R +       
Sbjct: 95  AAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPGIPIRPQSVIRKPSRSRVELGGGA 154

Query: 158 -AVAHGCRWWPREQYMAAA-----QQLHFGGLWQAANNGGRENLATTELESIAMASRNA- 217
            A A+G RWWPREQY+AAA     QQ+  GGL Q  NNG           S+AMA+RNA 
Sbjct: 155 TAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVNNG---------FASMAMANRNAS 214

Query: 218 -TSSSSQIFGADQYNIHGLDLTLKL 226
            +SSSSQIFGADQY ++GLDL+LKL
Sbjct: 215 SSSSSSQIFGADQYIVNGLDLSLKL 219

[Close]

BLAST of CmoCh14G005080 vs. ExPASy TrEMBL
Match: A0A5D3DPN0 (Zinc finger protein GIS-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006570 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 6.4e-51
Identity = 129/211 (61.14%), Postives = 141/211 (66.82%), Query Frame = 0


Query: 38  TETRTKRETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTT 97
           TE + K ETRVFYCKFCSR FSNLQALGGHQNAHKRERDIAKREKA AA           
Sbjct: 29  TEAKAKEETRVFYCKFCSRNFSNLQALGGHQNAHKRERDIAKREKAAAA----------- 88

Query: 98  AAAAAATTTGAFDSIGSFYHPYYSAMAIHALRNKALGFPIRPP--IRKPTRPQ------- 157
           AAAA   TT  FDSIGSFYHPYYS MAIH+LRNK+ GFPIRP   IRKP+R +       
Sbjct: 89  AAAAGGRTTDVFDSIGSFYHPYYSVMAIHSLRNKSPGFPIRPQSVIRKPSRSRVELSGGG 148

Query: 158 --------AVAHGCRWWPREQYMAA-----AQQLHFGGLWQAANNGGRENLATTELESIA 217
                   A A+G RWWPREQYMAA      QQ+  GGL Q  NNG          ESIA
Sbjct: 149 ATAAAAAAAAAYGYRWWPREQYMAALAAAQQQQIQSGGLLQGFNNG---------FESIA 208

Query: 218 MASRNATSSSS-QIFGADQYNIHGLDLTLKL 226
           M + NA+SSSS QIFGADQ  ++GLDL+LKL
Sbjct: 209 MENINASSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]

BLAST of CmoCh14G005080 vs. ExPASy TrEMBL
Match: E5GBP2 (Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 6.4e-51
Identity = 129/211 (61.14%), Postives = 141/211 (66.82%), Query Frame = 0


Query: 38  TETRTKRETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTT 97
           TE + K ETRVFYCKFCSR FSNLQALGGHQNAHKRERDIAKREKA AA           
Sbjct: 29  TEAKAKEETRVFYCKFCSRNFSNLQALGGHQNAHKRERDIAKREKAAAA----------- 88

Query: 98  AAAAAATTTGAFDSIGSFYHPYYSAMAIHALRNKALGFPIRPP--IRKPTRPQ------- 157
           AAAA   TT  FDSIGSFYHPYYS MAIH+LRNK+ GFPIRP   IRKP+R +       
Sbjct: 89  AAAAGGRTTDVFDSIGSFYHPYYSVMAIHSLRNKSPGFPIRPQSVIRKPSRSRVELSGGG 148

Query: 158 --------AVAHGCRWWPREQYMAA-----AQQLHFGGLWQAANNGGRENLATTELESIA 217
                   A A+G RWWPREQYMAA      QQ+  GGL Q  NNG          ESIA
Sbjct: 149 ATAAAAAAAAAYGYRWWPREQYMAALAAAQQQQIQSGGLLQGFNNG---------FESIA 208

Query: 218 MASRNATSSSS-QIFGADQYNIHGLDLTLKL 226
           M + NA+SSSS QIFGADQ  ++GLDL+LKL
Sbjct: 209 MENINASSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]

BLAST of CmoCh14G005080 vs. TAIR 10
Match: AT5G01860.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 9.2e-10
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 0


Query: 38  TETRTKRETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAV 85
           + TR + + RVF C FC ++FS  QALGGHQNAHK+ER +AKR K +
Sbjct: 56  SSTRNEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRKEI 102

[Close]

BLAST of CmoCh14G005080 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 34  TAMGTETRTKRETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAVAAAAAA 91
           T++  E+ T  E ++F C +C R F + QALGGHQNAHKRER +AKR + +AA+A+A
Sbjct: 46  TSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASA 102

[Close]

BLAST of CmoCh14G005080 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-08
Identity = 34/77 (44.16%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 13  ELNLKHSFKVLKAEPGFEEAGTAMGTETRTKRETRVFYCKFCSRKFSNLQALGGHQNAHK 72
           ELNL    +     P F  +         T  E ++F C +C R F + QALGGHQNAHK
Sbjct: 77  ELNLLDCLETGVVTPSFNGS---------TSTEQKLFSCNYCQRTFYSSQALGGHQNAHK 136

Query: 73  RERDIAKREKAVAAAAA 90
           RER +AKR + +A+AAA
Sbjct: 137 RERTLAKRGQRMASAAA 144

[Close]

BLAST of CmoCh14G005080 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 57.4 bits (137), Expect = 1.7e-08
Identity = 26/41 (63.41%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 40 TRTKRETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKR 81
          T+ +   RVF C +C RKF + QALGGHQNAHKRER +AKR
Sbjct: 50 TKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR 90

[Close]

BLAST of CmoCh14G005080 vs. TAIR 10
Match: AT5G48890.1 (C2H2-like zinc finger protein )

HSP 1 Score: 56.2 bits (134), Expect = 3.9e-08
Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 47 RVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREK 83
          R+F C FCSRKF + QALGGHQNAHK+ER  A+R K
Sbjct: 33 RIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAK 68

The following BLAST results are available for this feature:

BLAST of CmoCh14G005080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39262	2.2e-08	52.63	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q39266	2.4e-07	63.41	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q9FKA9	5.4e-07	69.44	Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1	[more]
Q39263	1.2e-06	39.56	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39265	1.6e-06	56.10	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]

BLAST of CmoCh14G005080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F842	3.4e-121	100.00	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441732 PE=4 SV...	[more]
A0A6J1J773	5.9e-89	83.33	zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481989 PE=4 SV=1	[more]
A0A0A0LBM7	3.3e-55	65.37	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819820 P...	[more]
A0A5D3DPN0	6.4e-51	61.14	Zinc finger protein GIS-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GBP2	6.4e-51	61.14	Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of CmoCh14G005080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01860.1	9.2e-10	57.45	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	1.6e-09	52.63	zinc finger protein 3	[more]
AT5G10970.1	1.0e-08	44.16	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G24625.1	1.7e-08	63.41	zinc finger protein 7	[more]
AT5G48890.1	3.9e-08	69.44	C2H2-like zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 225..225
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 29..105 e-value: 7.3E-8 score: 34.1
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 9..225
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 51..71
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 49..76 score: 11.156685
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 46..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G005080.1	CmoCh14G005080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway