CmoCh14G004990 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G004990
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	R3h domain containing protein, putative
Location	Cmo_Chr14: 2475159 .. 2478701 (+)
RNA-Seq Expression	CmoCh14G004990
Synteny	CmoCh14G004990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACCCCTTTCCCCTCCGCCTGGTGGGATAAGAAAGAGGGTTCTCTCTCTTTTTCCTTCTCCTCCTCCAGATGCTAAGAATTAAACCCTTTCCCTGTTTCTGCACCTTACCTCTTCCTATTCTTCTTCTCCTCCTCTGACACAGAAGGGGAAGAAGAAACCCTTTGAAGGAATCGAACAGTTTCAGAGTCTTGTGCGTTGAATCATAAACAGAGCTCTTTTCCATGGAATCGGCTTCCTTCGAACCAACCCCACAAGGGTTCAAGGACAAGGAGTCAATGGTTGATCCCTTCTTGGTTGAGGCTCTCCAGAATCCTCGTCATCGTCTTACCAGTGAGTTCTTTTGTTATTTCTTTCGTTTTTTTTTTAAGGGGTTGAATTGCCCAGTTGACCTAATCTTGAATCTGTTCTTGGGATCAATTGATTTCGATTTGCGAGTTTGTATTGGTTGATTTGGATTTGGATTTGGATTTGCTATAAGCTTGTAGTTGGGTTAGATCTGTTTTTCTCTTTGAGGTTCCTGTCTTTTTGTTTGTGGATGAAATCTGGATTTGGCCAAGAATCTTATGATTATGGGTTCATATTTCTTAAGAAATAGAATGATTTCATTGTAGAGATTATGGATTTACAAGAAATCAGATGAAATTTACCCAACCCACCAAGGGGATTACAGAAAATTCTCAATTGGCTATAATTTGTGTTCACTATGATGAACACACCAAATAGAAGAAAGCAGCCTGACTTGGTCCTTCTGTCTCGATGTTTCCATAAAACCATCACCATGGAGCACGACCGCAGAATTCTAGCGTTTTTTCGCCTAACCAGAAATGAGCTGTAAAAGGCTTCGGTGCAAGTCGTAGGCAAAACCCAACTGAGTTTGAAAGATTTAAACAATCTATACCAATATGAGACAGCAAATCGGCATTTAATGATATATTTGGTAGTTAGTAGGGATTTTTTTTGTGAGATCCCCACGTCGGTTGGGGAGGAGAACGGAACACCCTTTACAGGGGTGTGGAAACCTCTCCCTAGTAGATGTGTTTTAAAAACCTTGTAGGGAAGTTCGAAAGGGAAAGCCCAAAGAGGACGATATCTGTTAGCGGTGTGCTTGGGCCATTATAAATGGTATCAGAGCCAGATATCAGGCGGTGTGCTAGCGAGGACGGTGAGCCCCGAAGGGGGATGGACACGGAGCAATGTGCCAAGCCCCGGGGGGGGGGATTGTCAGATCCCTCGTCGGTTGGAGAGGGGAACAAGACATTGGGATTTCTTCATTTGAACATTGGTTTCTTTTAATAATGTGAATGATTTACATGTTAATTTACGGTTTCTTTTCAGTTTTACGGATGGAACTTGACATCCAGAAGTTCTTGCATAATCCGGATCAGCAGCTCTTCGAGTTCCAGCATTTTCCTACATCATACCTTCGACTTGCTGCTCATCGTGTTGCTCAACATTATGGCCTTCAAACCATGGTTCAGGACTCCGGCATTGATGGTTTTGGAAATAGGATCTTGGTTCGTAAAACGGTGGAAAACAGACTCCCTTCTGTGCGGTTATCTGAAATACCTGCGAAGCAATTCGACAATGAGAAAAATGAGCAGGTCAAATTCGTCATCAGACCTCGGCCTAACAAAATGTCTGAAACTTCTGCCAATGATGGAGGTCTCAAACAAAATTCTGTCCGAAGCGTGGAAGAGAGAAAGGAGGAATACGATAGGGCACGAGCTCGAATCTTCAGCTCTCCAAGTAGTCCCGAGTTAGACGATACAACATCTCAATCCCCATCTGAAGGAAAATATGCATGCTCGAACAGGGATGAAACTGAAGGCTTTAGAACTTTGGCTGGTGATTTGGAAAAATTTAATGGCAGGGACGGCATGACTTCTCGGGTTGCCATTTTCAAAGATAGGGAAAAGGATCGTAGTGACCCCGATTATGATCGCAACTATGATAGGTATGTTCGTGTATTTGGCCTTGTTTTTTGGTATCTTTATACACTGAATGTCTGTCTATTAAGCCTACGTCTATGTTATGCCAATGACTCTTTGTTGAAACAGGTATATTAGGAACCTTCCAACCAATCAAAATTTAAGCTTGGCTCCCTTTACTATGCAAAAAATGCAGCCTCCATTTGTACAATGTGATATGGGTTACTCCCTCATGGGTCATATACCAGGAACTCAACCTTCACTTAGCTATGGGCCTCATCCGAGTCCTGTCGTAAGCCCTTTCTCCGCAATGGGTATGAACCGAACGTCTAGAGACGCTTCTTATGAGCAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCCTACAACCAGCTCAGGCATTCTGCTTTTCAGGTACTTTTAATTAACGTACCTTTTCCGTTCGCTAAAGGTTGCAAGTATTGTTTGTCGAAAACCAAGAAAAAAGTTTGTCAATCCTTTTGCATTGTGGATGCTCGGCATTGTTTTTCGTTTGTTTATTCACGATTGATATGAGATGTAACAGCCTAACTAGCAAATATTGTCCTCTTTGGGCTTTCCCTTTTGCTTCACCTTTCGAGTTTCCCCTCAAGGTTTTTAAAATGCGTATTTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTTGTTTTACTCCCCAATCAATGTGAGATCTTATGATAAAAGATAAGAAGCTTTGGCTCACATCGGTTGGGGAGGAGAAAGAAGCATTCTTTATATGGGTTTTATATGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAGATCCTTGAGGGAAAACCCGAAAGGGAAAGCCCAATGAGGACAATTTCTACTAGTGGTGGGGCTTGGGCTGTTACATGAGATCATAAAACTAGAGTTGAATAGTTCGGTTGATAATGTTGAAAGACGTTTTTAGAAAGCAATCGATATTTCACTGATAAGATGAGATAGGACGGAGAGATATGATTGAGGAGTTCCGTTGCACGAGGATGAAAGGTTTTCGTGGCACGCTAGGTTATGCTCTTGGGGGCTTTGGGAAGAAAGAAACATTAGAGTTTTTAGAGGGTTCGAGAGACTCTCGAGTTAGGTGTGGTCTCGTATTAGGTTCAATGTTTACTAACTGGCATTGATCTCGATGAACGTTCGGTTTAGTCTCGGCCAGAACTTGTAAATGATGAATAATTGTGAATGTTTTGAACTCTAATGGTAGCATCTGGTGGTATGTTATATTGCAGGCCCCATTCTGCCAGCAACCCCTCAGCTTTGACTACTCTCAAAACCACCATTAGAGATGTGATGATGATGATGAGGAGCTTAGGTGAAAAACACTTTACAATTAGATTTTGTTGTGTACTCTTGTTTGATTGACTGCTTGGAATCTCAGTTCTAGTTTTTGCATAACTTCTTATAACACTTTCTCTCATACTCCATTATGCCATTAGCTGCTATACAACACTCCTTAATAACATTTCTCCCATTCAACATTGATTTTCTTGGTATTTTCACACGTTCATCGGTCTCATAGCGACGTGAAGAGTGACTAAGATTAAAGTATAAACAGACTCG

mRNA sequence

TTACCCCTTTCCCCTCCGCCTGGTGGGATAAGAAAGAGGGTTCTCTCTCTTTTTCCTTCTCCTCCTCCAGATGCTAAGAATTAAACCCTTTCCCTGTTTCTGCACCTTACCTCTTCCTATTCTTCTTCTCCTCCTCTGACACAGAAGGGGAAGAAGAAACCCTTTGAAGGAATCGAACAGTTTCAGAGTCTTGTGCGTTGAATCATAAACAGAGCTCTTTTCCATGGAATCGGCTTCCTTCGAACCAACCCCACAAGGGTTCAAGGACAAGGAGTCAATGGTTGATCCCTTCTTGGTTGAGGCTCTCCAGAATCCTCGTCATCGTCTTACCATTTTACGGATGGAACTTGACATCCAGAAGTTCTTGCATAATCCGGATCAGCAGCTCTTCGAGTTCCAGCATTTTCCTACATCATACCTTCGACTTGCTGCTCATCGTGTTGCTCAACATTATGGCCTTCAAACCATGGTTCAGGACTCCGGCATTGATGGTTTTGGAAATAGGATCTTGGTTCGTAAAACGGTGGAAAACAGACTCCCTTCTGTGCGGTTATCTGAAATACCTGCGAAGCAATTCGACAATGAGAAAAATGAGCAGGTCAAATTCGTCATCAGACCTCGGCCTAACAAAATGTCTGAAACTTCTGCCAATGATGGAGGTCTCAAACAAAATTCTGTCCGAAGCGTGGAAGAGAGAAAGGAGGAATACGATAGGGCACGAGCTCGAATCTTCAGCTCTCCAAGTAGTCCCGAGTTAGACGATACAACATCTCAATCCCCATCTGAAGGAAAATATGCATGCTCGAACAGGGATGAAACTGAAGGCTTTAGAACTTTGGCTGGTGATTTGGAAAAATTTAATGGCAGGGACGGCATGACTTCTCGGGTTGCCATTTTCAAAGATAGGGAAAAGGATCGTAGTGACCCCGATTATGATCGCAACTATGATAGGTATATTAGGAACCTTCCAACCAATCAAAATTTAAGCTTGGCTCCCTTTACTATGCAAAAAATGCAGCCTCCATTTGTACAATGTGATATGGGTTACTCCCTCATGGGTCATATACCAGGAACTCAACCTTCACTTAGCTATGGGCCTCATCCGAGTCCTGTCGTAAGCCCTTTCTCCGCAATGGGTATGAACCGAACGTCTAGAGACGCTTCTTATGAGCAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCCTACAACCAGCTCAGGCATTCTGCTTTTCAGGCCCCATTCTGCCAGCAACCCCTCAGCTTTGACTACTCTCAAAACCACCATTAGAGATGTGATGATGATGATGAGGAGCTTAGGTGAAAAACACTTTACAATTAGATTTTGTTGTGTACTCTTGTTTGATTGACTGCTTGGAATCTCAGTTCTAGTTTTTGCATAACTTCTTATAACACTTTCTCTCATACTCCATTATGCCATTAGCTGCTATACAACACTCCTTAATAACATTTCTCCCATTCAACATTGATTTTCTTGGTATTTTCACACGTTCATCGGTCTCATAGCGACGTGAAGAGTGACTAAGATTAAAGTATAAACAGACTCG

Coding sequence (CDS)

ATGGAATCGGCTTCCTTCGAACCAACCCCACAAGGGTTCAAGGACAAGGAGTCAATGGTTGATCCCTTCTTGGTTGAGGCTCTCCAGAATCCTCGTCATCGTCTTACCATTTTACGGATGGAACTTGACATCCAGAAGTTCTTGCATAATCCGGATCAGCAGCTCTTCGAGTTCCAGCATTTTCCTACATCATACCTTCGACTTGCTGCTCATCGTGTTGCTCAACATTATGGCCTTCAAACCATGGTTCAGGACTCCGGCATTGATGGTTTTGGAAATAGGATCTTGGTTCGTAAAACGGTGGAAAACAGACTCCCTTCTGTGCGGTTATCTGAAATACCTGCGAAGCAATTCGACAATGAGAAAAATGAGCAGGTCAAATTCGTCATCAGACCTCGGCCTAACAAAATGTCTGAAACTTCTGCCAATGATGGAGGTCTCAAACAAAATTCTGTCCGAAGCGTGGAAGAGAGAAAGGAGGAATACGATAGGGCACGAGCTCGAATCTTCAGCTCTCCAAGTAGTCCCGAGTTAGACGATACAACATCTCAATCCCCATCTGAAGGAAAATATGCATGCTCGAACAGGGATGAAACTGAAGGCTTTAGAACTTTGGCTGGTGATTTGGAAAAATTTAATGGCAGGGACGGCATGACTTCTCGGGTTGCCATTTTCAAAGATAGGGAAAAGGATCGTAGTGACCCCGATTATGATCGCAACTATGATAGGTATATTAGGAACCTTCCAACCAATCAAAATTTAAGCTTGGCTCCCTTTACTATGCAAAAAATGCAGCCTCCATTTGTACAATGTGATATGGGTTACTCCCTCATGGGTCATATACCAGGAACTCAACCTTCACTTAGCTATGGGCCTCATCCGAGTCCTGTCGTAAGCCCTTTCTCCGCAATGGGTATGAACCGAACGTCTAGAGACGCTTCTTATGAGCAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCCTACAACCAGCTCAGGCATTCTGCTTTTCAGGCCCCATTCTGCCAGCAACCCCTCAGCTTTGACTACTCTCAAAACCACCATTAG

Protein sequence

MESASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSPSEGKYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSPFSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNHH

Homology

[Close]

BLAST of CmoCh14G004990 vs. ExPASy Swiss-Prot
Match: Q80TM6 (R3H domain-containing protein 2 OS=Mus musculus OX=10090 GN=R3hdm2 PE=1 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-12
Identity = 55/160 (34.38%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 23  FLVEAL-QNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFP--TSYLRLAAHRVAQHYGL 82
           FLV  L +NPR R+ +L++E +I  F+++ + Q   F+ FP  TSY R+  HRVA ++G+
Sbjct: 157 FLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ---FKKFPQMTSYHRMLLHRVAAYFGM 216

Query: 83  QTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNE--QVKFVIR------ 142
                D  +D  G  +++ KT   R+P  R SE       +EKN   Q +F+++      
Sbjct: 217 -----DHNVDQTGKAVIINKTSSTRIPEQRFSE----HIKDEKNTEFQQRFILKRDDASM 276

Query: 143 PRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFS 172
            R +        DG       +S+EER+EEY R R RIF+
Sbjct: 277 DRDDNQMRVPLQDG----RRSKSIEEREEEYQRVRERIFA 300

[Close]

BLAST of CmoCh14G004990 vs. ExPASy Swiss-Prot
Match: A0JNC2 (R3H domain-containing protein 2 OS=Bos taurus OX=9913 GN=R3HDM2 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-11
Identity = 59/191 (30.89%), Postives = 95/191 (49.74%), Query Frame = 0


Query: 23  FLVEAL-QNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFP--TSYLRLAAHRVAQHYGL 82
           FLV  L +NPR R+ +L++E +I  F+++ + Q   F+ FP  TSY R+  HRVA ++G+
Sbjct: 157 FLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ---FKKFPQMTSYHRMLLHRVAAYFGM 216

Query: 83  QTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNE--QVKFVIR------ 142
                D  +D  G  +++ KT   R+P  R SE       +EKN   Q +F+++      
Sbjct: 217 -----DHNVDQTGKAVIINKTSNTRIPEQRFSE----HIKDEKNTEFQQRFILKRDDASM 276

Query: 143 PRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPE--LDDTTSQSPSEG 201
            R +        DG       +S+EER+EEY R R RIF+  +     L+D         
Sbjct: 277 DRDDNQIRVPLQDG----RRSKSIEEREEEYQRVRERIFARETGQNGYLNDIRGNREGLS 331

[Close]

BLAST of CmoCh14G004990 vs. ExPASy Swiss-Prot
Match: Q15032 (R3H domain-containing protein 1 OS=Homo sapiens OX=9606 GN=R3HDM1 PE=1 SV=3)

HSP 1 Score: 71.2 bits (173), Expect = 2.6e-11
Identity = 59/187 (31.55%), Postives = 95/187 (50.80%), Query Frame = 0


Query: 23  FLVEALQ-NPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVAQHYGLQT 82
           FLV  L+ NPR R+ +L++E +I  F+ N +    +F    TSY R+  HRVA ++GL  
Sbjct: 156 FLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPM-TSYHRMLLHRVAAYFGL-- 215

Query: 83  MVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNE--QVKFVIRPRPNKMSE 142
              D  +D  G  ++V KT   R+P  + +E       ++K E  Q +++++ R N   +
Sbjct: 216 ---DHNVDQSGKSVIVNKTSNTRIPDQKFNE----HIKDDKGEDFQKRYILK-RDNSSFD 275

Query: 143 TSANDGGLKQNSVR---SVEERKEEYDRARARIFSSPSSPELDDTTSQSPSEGKYACSNR 202
              N   ++    R   S+EER+EEY RAR RIFS  S    ++       + + A S +
Sbjct: 276 KDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDSLCSQENYIIDKRLQDEDASSTQ 331

Query: 203 DETEGFR 204
              + FR
Sbjct: 336 QRRQIFR 331

[Close]

BLAST of CmoCh14G004990 vs. ExPASy Swiss-Prot
Match: Q9DCB4 (cAMP-regulated phosphoprotein 21 OS=Mus musculus OX=10090 GN=Arpp21 PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 2.9e-10
Identity = 50/159 (31.45%), Postives = 82/159 (51.57%), Query Frame = 0


Query: 23  FLVEALQ-NPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVAQHYGLQT 82
           FL+  L+ N R R+ +L+ME ++  F+ + +    +F    +SY R+  HRVA ++GL  
Sbjct: 151 FLINTLKNNSRDRMILLKMEQEMIDFIADSNNHYKKFPQM-SSYQRMLVHRVAAYFGL-- 210

Query: 83  MVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNE--QVKFVIRPRPNKMSE 142
              D  +D  G  +++ KT   R+P  R  E       +EK+E  Q +F+++ R N   +
Sbjct: 211 ---DHNVDQTGKSVIINKTSSTRIPEQRFCE----HLKDEKSEESQKRFILK-RDNSSID 270

Query: 143 TSANDGGL----KQNSVRSVEERKEEYDRARARIFSSPS 175
              N   +         +S+EER+EEY R R RIF+  S
Sbjct: 271 KEDNQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDS 298

[Close]

BLAST of CmoCh14G004990 vs. ExPASy Swiss-Prot
Match: Q9UBL0 (cAMP-regulated phosphoprotein 21 OS=Homo sapiens OX=9606 GN=ARPP21 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 6.4e-10
Identity = 53/164 (32.32%), Postives = 84/164 (51.22%), Query Frame = 0


Query: 23  FLVEALQ-NPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVAQHYGLQT 82
           FL+  L+ N R R+ +L+ME +I  F+ + +    +F    +SY R+  HRVA ++GL  
Sbjct: 152 FLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKKFPQM-SSYQRMLVHRVAAYFGL-- 211

Query: 83  MVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNE--QVKFVIRPRPNKMSE 142
              D  +D  G  +++ KT   R+P  R  E       +EK E  Q +F+++ R N   +
Sbjct: 212 ---DHNVDQTGKSVIINKTSSTRIPEQRFCE----HLKDEKGEESQKRFILK-RDNSSID 271

Query: 143 TSANDGGLKQNSV---------RSVEERKEEYDRARARIFSSPS 175
              N    +QN +         +S+EER+EEY R R RIF+  S
Sbjct: 272 KEDN----QQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDS 300

[Close]

BLAST of CmoCh14G004990 vs. ExPASy TrEMBL
Match: A0A6J1F3M8 (uncharacterized protein LOC111441873 OS=Cucurbita moschata OX=3662 GN=LOC111441873 PE=4 SV=1)

HSP 1 Score: 713.4 bits (1840), Expect = 4.8e-202
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0


Query: 1   MESASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60
           MESASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH
Sbjct: 1   MESASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60

Query: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDN 120
           FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDN
Sbjct: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDN 120

Query: 121 EKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDD 180
           EKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDD
Sbjct: 121 EKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDD 180

Query: 181 TTSQSPSEGKYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240
           TTSQSPSEGKYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN
Sbjct: 181 TTSQSPSEGKYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240

Query: 241 YDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSP 300
           YDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSP
Sbjct: 241 YDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSP 300

Query: 301 FSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNHH 356
           FSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNHH
Sbjct: 301 FSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNHH 355

[Close]

BLAST of CmoCh14G004990 vs. ExPASy TrEMBL
Match: A0A6J1J0D7 (uncharacterized protein LOC111482320 OS=Cucurbita maxima OX=3661 GN=LOC111482320 PE=4 SV=1)

HSP 1 Score: 705.3 bits (1819), Expect = 1.3e-199
Identity = 350/355 (98.59%), Postives = 353/355 (99.44%), Query Frame = 0


Query: 1   MESASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60
           MESASFEPTPQGFK+KESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH
Sbjct: 1   MESASFEPTPQGFKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60

Query: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDN 120
           FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQ DN
Sbjct: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQLDN 120

Query: 121 EKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDD 180
           EKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDD
Sbjct: 121 EKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDD 180

Query: 181 TTSQSPSEGKYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240
           TTSQSPSEGKYACSNRDETEGFRTLAGD EKFNGRDGMTSRVAIFKDREKDRSDPDYDRN
Sbjct: 181 TTSQSPSEGKYACSNRDETEGFRTLAGDFEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240

Query: 241 YDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSP 300
           YDRYIRNLPTNQNLSLAPFTMQK+QPPFVQCDMGYSLMGHIPGTQPSL+YGPHPSPVVSP
Sbjct: 241 YDRYIRNLPTNQNLSLAPFTMQKIQPPFVQCDMGYSLMGHIPGTQPSLNYGPHPSPVVSP 300

Query: 301 FSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNHH 356
           FSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNHH
Sbjct: 301 FSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNHH 355

[Close]

BLAST of CmoCh14G004990 vs. ExPASy TrEMBL
Match: A0A0A0LFE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G817720 PE=4 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 3.6e-181
Identity = 320/354 (90.40%), Postives = 334/354 (94.35%), Query Frame = 0


Query: 1   MESASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60
           MESASF+PTPQGF DKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH
Sbjct: 1   MESASFDPTPQGFNDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60

Query: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDN 120
           FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRI+VRK  ENRLPSVRLSEIPAKQ DN
Sbjct: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRIVVRKMAENRLPSVRLSEIPAKQLDN 120

Query: 121 EKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDD 180
           EK+EQVK VIRPRPNKMS  SAN+GG KQ+SVRSVEERKEEYDRARARIFSSPSSPE+DD
Sbjct: 121 EKHEQVKIVIRPRPNKMSGISANEGGHKQSSVRSVEERKEEYDRARARIFSSPSSPEIDD 180

Query: 181 TTSQSPSEGKYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240
           T SQ PSEGKYACSNRDETEG RTL G+LEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN
Sbjct: 181 TISQIPSEGKYACSNRDETEGCRTLGGELEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240

Query: 241 YDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSP 300
           YDRYIRNLPTNQNLSLAPF M K+QPPFVQ D GYSL+GH+PGTQ S++YGPHPSPVVSP
Sbjct: 241 YDRYIRNLPTNQNLSLAPFIMPKVQPPFVQYDSGYSLVGHMPGTQASVNYGPHPSPVVSP 300

Query: 301 FSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 355
           F AMG+N+ SRDASYEQWQSAAMMYAHSYNQ RHSAFQAPFCQQPLSFDYSQNH
Sbjct: 301 FCAMGLNQASRDASYEQWQSAAMMYAHSYNQFRHSAFQAPFCQQPLSFDYSQNH 354

[Close]

BLAST of CmoCh14G004990 vs. ExPASy TrEMBL
Match: A0A1S3B8A9 (uncharacterized protein LOC103486865 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486865 PE=4 SV=1)

HSP 1 Score: 640.2 bits (1650), Expect = 5.1e-180
Identity = 318/354 (89.83%), Postives = 335/354 (94.63%), Query Frame = 0


Query: 1   MESASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60
           MESASF+PTPQGF DKESMVDPFLVEALQNPRHRLTILRMELDIQKFL+NPDQQLFEFQH
Sbjct: 1   MESASFDPTPQGFNDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLNNPDQQLFEFQH 60

Query: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDN 120
           FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRI+VRK VENRLPSVRLSEIPAKQ DN
Sbjct: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRIVVRKMVENRLPSVRLSEIPAKQLDN 120

Query: 121 EKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDD 180
           EK+EQVK VIRPRPNKMS  SAN+GG KQ+SVR+VEERKEEYDRARARIFSSPSSPE+DD
Sbjct: 121 EKHEQVKIVIRPRPNKMSGISANEGGHKQSSVRTVEERKEEYDRARARIFSSPSSPEIDD 180

Query: 181 TTSQSPSEGKYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240
           T SQ+PSEGKYACSNRDETEG RTL GDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN
Sbjct: 181 TISQTPSEGKYACSNRDETEGCRTLGGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240

Query: 241 YDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSP 300
           YDRYIRNLPTNQNLSLAPF M K+QPPFVQ D GYSL+GH+PGTQ S++YGPHPS VVSP
Sbjct: 241 YDRYIRNLPTNQNLSLAPFIMPKIQPPFVQYDSGYSLVGHMPGTQASVNYGPHPSSVVSP 300

Query: 301 FSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 355
           F AMG+N+ SRDASYEQWQ+AAMMYAHSYNQ RHSAFQAPFCQQPLSFDYSQNH
Sbjct: 301 FCAMGLNQASRDASYEQWQNAAMMYAHSYNQFRHSAFQAPFCQQPLSFDYSQNH 354

[Close]

BLAST of CmoCh14G004990 vs. ExPASy TrEMBL
Match: A0A6J1DGF4 (uncharacterized protein LOC111019846 OS=Momordica charantia OX=3673 GN=LOC111019846 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 3.1e-177
Identity = 315/353 (89.24%), Postives = 332/353 (94.05%), Query Frame = 0


Query: 3   SASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFP 62
           S S+E  PQG K+KESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNP+QQLFEFQHFP
Sbjct: 5   SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFP 64

Query: 63  TSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEK 122
           TSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKT+ENRLPSVRLSEIPAKQ DNEK
Sbjct: 65  TSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSEIPAKQLDNEK 124

Query: 123 NEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTT 182
           +E VK VIRPRPNKMSE +ANDG LKQNSVRSVEERKEEYDRARARIFSSPSSP+LDDT 
Sbjct: 125 HEHVKIVIRPRPNKMSEIAANDGSLKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTP 184

Query: 183 SQSPSEGKYACSNRDETEGFRTLAG-DLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRNY 242
           SQ+PS+GKYACSNRDETE  RTL G DLEKFNGR+GMTSRVAIFKDREKDRSDPDYDRNY
Sbjct: 185 SQAPSDGKYACSNRDETETIRTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNY 244

Query: 243 DRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSPF 302
           +RY RNLPTNQNL+LAPF MQK+QPPFVQ D GYSLMGHIPGTQ S+SYGPHPSPVVSPF
Sbjct: 245 ERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF 304

Query: 303 SAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 355
             +G+N+TSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH
Sbjct: 305 CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 357

[Close]

BLAST of CmoCh14G004990 vs. TAIR 10
Match: AT3G56680.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 335.1 bits (858), Expect = 6.8e-92
Identity = 186/337 (55.19%), Postives = 231/337 (68.55%), Query Frame = 0


Query: 20  VDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVAQHYGL 79
           VDPFLVEAL N RHRLTILRMELD+Q+ L NP+QQ FEFQHFPTSYLRLAAHRVA HYGL
Sbjct: 24  VDPFLVEALHNSRHRLTILRMELDVQRLLQNPEQQQFEFQHFPTSYLRLAAHRVANHYGL 83

Query: 80  QTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIP-AKQFDNEKNEQVKFVIRPRPNKMS 139
            T VQ+SG DG  NRILV KT E++ P+VRLSEIP AKQ +N K E  K  I+ RP+K S
Sbjct: 84  ATAVQESGADGNENRILVTKTTESKFPAVRLSEIPVAKQSENGKFESRKVSIKTRPSKGS 143

Query: 140 ETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSPSEGKYACSNRDE 199
              A D    +  +RSVEERKEEYD+AR RIFS  +    DD++S++    + A  +RD+
Sbjct: 144 GYGAGDLEKNRGPLRSVEERKEEYDKARERIFSGLTGLSCDDSSSETQVYERNASLSRDD 203

Query: 200 TEGFRTLAGDLEKFNG--RDGMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLPTNQNLSL 259
            +  +    +++K       G TSRVAIF+DREKDR DPDYDR + RYIR+LP NQN +L
Sbjct: 204 KQVSKNAYVEVKKNLSIRESGPTSRVAIFRDREKDRFDPDYDRRHQRYIRSLPVNQNFNL 263

Query: 260 APFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSPFSAMGMNRTSRDASYE 319
            PF +Q++  P+   +MG++    IP     L +GPHPS ++SP+       T+ DA Y 
Sbjct: 264 PPFNIQQIPTPYY--EMGFTGYNQIPSPPAPLGFGPHPSSIMSPYG------TTMDAMYM 323

Query: 320 QWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQN 354
            W +AAMMYAH Y Q R+ + QA F QQPLSFDY QN
Sbjct: 324 HWPNAAMMYAHPYEQFRNGSLQAQFVQQPLSFDYMQN 352

[Close]

BLAST of CmoCh14G004990 vs. TAIR 10
Match: AT2G40960.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 318.2 bits (814), Expect = 8.6e-87
Identity = 184/343 (53.64%), Postives = 233/343 (67.93%), Query Frame = 0


Query: 15  DKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVA 74
           DK   VDPFLVEALQNPRHRLTILRMELD+Q+FL +PDQQ FEFQHFPTSYLR AAHRVA
Sbjct: 16  DKGFNVDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYLRFAAHRVA 75

Query: 75  QHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNEQVKFVIRPRP 134
            HYGL T V+D G DG  +RI+V K+ ++R P+ RLSEIP KQ +  K E +K VI+PRP
Sbjct: 76  NHYGLITSVRDGGADGNESRIVVTKSSDSRFPAARLSEIPVKQSETGKFEHMKVVIKPRP 135

Query: 135 NKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSPSEGKYACS 194
            K S    ++  LK   ++SVEERKE+YDRARARIF+   + + +D++S++        S
Sbjct: 136 TKGSGMEGDE--LKGGLLKSVEERKEDYDRARARIFNGLVNIDCNDSSSETNPWRVNCSS 195

Query: 195 NRDETEGFR--TLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLPTNQ 254
           +RDE +  +   +  D    + +    SR+AI +DREKDR DPDYDR+  RYI NLP +Q
Sbjct: 196 SRDENQVLKNGNIEADKNNISRKSNPASRIAILRDREKDRYDPDYDRSNYRYISNLPVDQ 255

Query: 255 NLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSPFSAMGMNRTSRD 314
           NL +A F +Q M  P    DMG+   G+ P   PSL+ G H   V+SP    G+N+ SRD
Sbjct: 256 NLCVAHFNIQTMGTPIY--DMGF--RGYSPTAPPSLNLGQH--SVMSPCVTTGLNQPSRD 315

Query: 315 AS-YEQW-QSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQN 354
           A+ Y QW  +AA+MY HSY+  R+S FQA F  QPLSFDY QN
Sbjct: 316 AAMYMQWPNAAAVMYTHSYDHFRNSPFQAQFYPQPLSFDYMQN 350

[Close]

BLAST of CmoCh14G004990 vs. TAIR 10
Match: AT3G10770.2 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 285.0 bits (728), Expect = 8.1e-77
Identity = 175/338 (51.78%), Postives = 213/338 (63.02%), Query Frame = 0


Query: 15  DKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVA 74
           +KE+MVDPFLVEALQNPRHRLTILRMELDIQKF  NP+Q  FEF  FPTSYLRLAAHRVA
Sbjct: 6   EKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAAHRVA 65

Query: 75  QHYGLQTMVQDSGI---DGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNEQVKFVIR 134
           QHYGL TM  D+G    DG  NRILV KT E+R P V LSEIP KQ +N + E  K  I+
Sbjct: 66  QHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFKIAIK 125

Query: 135 PRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSPS--EG 194
           PRP + S    +  G++QN +RSVEERKEEYD+ARARIF+SPSS + +D++S  P   E 
Sbjct: 126 PRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLRPPSLEV 185

Query: 195 KYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLP 254
           +  C NR+ETE        ++      G TSRVAI +DREKDR DPDYDR+YDRY+R +P
Sbjct: 186 RNTCINRNETE-VAVNNSPVDAVTRDSGRTSRVAIIRDREKDRYDPDYDRSYDRYVRVMP 245

Query: 255 TNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIP-GTQPSLSYGPHPSPVVSPFSAMGMNR 314
           + Q+ S  P  +     PF           H+P G Q +L+YG   +P +SPF       
Sbjct: 246 SGQSFSPMPIHI-----PFHD-----GFFPHMPRGHQANLNYGHPLNPALSPF------- 305

Query: 315 TSRDASYEQW-QSAAMMYAHSYNQLRHSAFQAPFCQQP 346
           T   ASY  W  S  M YA   N    + ++ P    P
Sbjct: 306 THNVASYTPWPNSPVMNYAQPLNGSDTNLYRYPSASNP 325

[Close]

BLAST of CmoCh14G004990 vs. TAIR 10
Match: AT3G10770.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 278.1 bits (710), Expect = 9.9e-75
Identity = 172/338 (50.89%), Postives = 212/338 (62.72%), Query Frame = 0


Query: 15  DKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVA 74
           +KE+MVDPFLVEALQNPRHRLTILRMELDIQKF  NP+Q  FEF  FPTSYLRLAAHRVA
Sbjct: 6   EKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAAHRVA 65

Query: 75  QHYGLQTMVQDSGI---DGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNEQVKFVIR 134
           QHYGL TM  D+G    DG  NRILV KT E+R P V LSEIP KQ +N + E  K  I+
Sbjct: 66  QHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFKIAIK 125

Query: 135 PRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSPS--EG 194
           PRP + S    +  G++QN +RSVEERKEEYD+ARARIF+SPSS + +D++S  P   E 
Sbjct: 126 PRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLRPPSLEV 185

Query: 195 KYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLP 254
           +  C NR+ETE        ++      G TSRVAI +DREKDR DPDYDR+YDRY+ + P
Sbjct: 186 RNTCINRNETE-VAVNNSPVDAVTRDSGRTSRVAIIRDREKDRYDPDYDRSYDRYVVD-P 245

Query: 255 TNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIP-GTQPSLSYGPHPSPVVSPFSAMGMNR 314
             + + + P + Q   P  +          H+P G Q +L+YG   +P +SPF       
Sbjct: 246 AYRYVRVMP-SGQSFSPMPIHIPFHDGFFPHMPRGHQANLNYGHPLNPALSPF------- 305

Query: 315 TSRDASYEQW-QSAAMMYAHSYNQLRHSAFQAPFCQQP 346
           T   ASY  W  S  M YA   N    + ++ P    P
Sbjct: 306 THNVASYTPWPNSPVMNYAQPLNGSDTNLYRYPSASNP 333

[Close]

BLAST of CmoCh14G004990 vs. TAIR 10
Match: AT5G05100.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 272.7 bits (696), Expect = 4.2e-73
Identity = 174/342 (50.88%), Postives = 221/342 (64.62%), Query Frame = 0


Query: 15  DKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVA 74
           DKE+MVDPFLVEALQNPRHRLTILRMELDIQKF  +P+QQ +EFQ  PTSYLRL AHRVA
Sbjct: 6   DKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIAHRVA 65

Query: 75  QHYGL-QTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFD-NEKNEQVKFVIRP 134
           QHYGL  T ++  G+DG GNRIL  KTVE+R P V LSEIP KQ + + + E  K  I+P
Sbjct: 66  QHYGLFTTALEGGGVDGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGFKIAIKP 125

Query: 135 RPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSP------ 194
           RPN+ +  S +  G+++N +RSVEERKEEYD+ARARIF+SPSS + +D+++++P      
Sbjct: 126 RPNRGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSTRAPPPPYPR 185

Query: 195 --SEGKYACSNRDETE---GFRTLAGDLEKFNG--RD-GMTSRVAIFKDREKDRSDPDYD 254
             S+   AC +R+ETE    + +   D+E+ NG  RD G TSRVAI +DREKDR DPDYD
Sbjct: 186 LDSKHNTACPSRNETEVVVNYNSNPVDVER-NGVIRDSGRTSRVAIIRDREKDRYDPDYD 245

Query: 255 RNYDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVV 314
           RN  RY+R  P  QN +  P  +     PF       ++   +P TQ SL+YG HP    
Sbjct: 246 RN--RYVRVAPPVQNFNPIPIPL-----PFHD-----AIFPQMPRTQASLNYG-HP---- 305

Query: 315 SPFSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAP 341
                  +N      SY +W SA M YA + N      F+ P
Sbjct: 306 -------LNPAMTAPSYTEWPSATMTYAQTLNASDVHHFRHP 322

The following BLAST results are available for this feature:

BLAST of CmoCh14G004990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q80TM6	1.0e-12	34.38	R3H domain-containing protein 2 OS=Mus musculus OX=10090 GN=R3hdm2 PE=1 SV=2	[more]
A0JNC2	1.2e-11	30.89	R3H domain-containing protein 2 OS=Bos taurus OX=9913 GN=R3HDM2 PE=2 SV=1	[more]
Q15032	2.6e-11	31.55	R3H domain-containing protein 1 OS=Homo sapiens OX=9606 GN=R3HDM1 PE=1 SV=3	[more]
Q9DCB4	2.9e-10	31.45	cAMP-regulated phosphoprotein 21 OS=Mus musculus OX=10090 GN=Arpp21 PE=1 SV=2	[more]
Q9UBL0	6.4e-10	32.32	cAMP-regulated phosphoprotein 21 OS=Homo sapiens OX=9606 GN=ARPP21 PE=1 SV=2	[more]

BLAST of CmoCh14G004990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3M8	4.8e-202	100.00	uncharacterized protein LOC111441873 OS=Cucurbita moschata OX=3662 GN=LOC1114418...	[more]
A0A6J1J0D7	1.3e-199	98.59	uncharacterized protein LOC111482320 OS=Cucurbita maxima OX=3661 GN=LOC111482320...	[more]
A0A0A0LFE9	3.6e-181	90.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G817720 PE=4 SV=1	[more]
A0A1S3B8A9	5.1e-180	89.83	uncharacterized protein LOC103486865 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1DGF4	3.1e-177	89.24	uncharacterized protein LOC111019846 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]

BLAST of CmoCh14G004990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56680.1	6.8e-92	55.19	Single-stranded nucleic acid binding R3H protein	[more]
AT2G40960.1	8.6e-87	53.64	Single-stranded nucleic acid binding R3H protein	[more]
AT3G10770.2	8.1e-77	51.78	Single-stranded nucleic acid binding R3H protein	[more]
AT3G10770.1	9.9e-75	50.89	Single-stranded nucleic acid binding R3H protein	[more]
AT5G05100.1	4.2e-73	50.88	Single-stranded nucleic acid binding R3H protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001374	R3H domain	SMART	SM00393	R3H_4	coord: 18..100 e-value: 7.7E-12 score: 55.3
IPR001374	R3H domain	PFAM	PF01424	R3H	coord: 36..87 e-value: 3.0E-13 score: 49.5
IPR001374	R3H domain	PROSITE	PS51061	R3H	coord: 34..101 score: 10.02634
IPR024771	SUZ domain	PFAM	PF12752	SUZ	coord: 125..173 e-value: 1.3E-10 score: 41.8
IPR024771	SUZ domain	PROSITE	PS51673	SUZ	coord: 104..174 score: 12.792662
IPR036867	R3H domain superfamily	GENE3D	3.30.1370.50		coord: 11..133 e-value: 4.9E-31 score: 109.0
IPR036867	R3H domain superfamily	SUPERFAMILY	82708	R3H domain	coord: 9..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..197
None	No IPR available	PANTHER	PTHR15672	CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN	coord: 5..354
None	No IPR available	PANTHER	PTHR15672:SF15	OS05G0411600 PROTEIN	coord: 5..354
None	No IPR available	CDD	cd02642	R3H_encore_like	coord: 33..100 e-value: 2.79765E-19 score: 78.7985

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G004990.1	CmoCh14G004990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding