CmoCh14G004930 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G004930
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	aladin
Location	Cmo_Chr14: 2441002 .. 2443622 (-)
RNA-Seq Expression	CmoCh14G004930
Synteny	CmoCh14G004930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCCAGGGTTGGGAACACCCATTAGGCGTGGATTAGGGTGTGTTTCAACAATCAAGTGGTCGCCTTCTGGAGATTACTTTTTTGCAGCAAAATTGTAAGTACTATCCAACTGTCTTGTGAATTTTGTTACATAATAATCAGCCAGGTATGTTTTTTTCTGCATACATAAGACCATTCATTTTGCAGGGATGGAACATTTTATCTTTGGGAAACGAACACATGGACATCTGAACAGTGGTCGACAACAAGTGGTTTTGTCACGGTACAAAGAAAAAAGAATGATGTTTTATTCATTTTAACTTGTCCAGGGATGTTTCCCCTTCTCTCTTTGTCTCTGTCATTTTCTCTTGCTCGCCCCCTCTGTTTTGGTCTAGGAAAAAGATGCATAGTATCTACTTAAAATAATGTAATATAGATGGGCAGATGGAGGAGAAACTTCCTATGTACTTCGGTTTCTCATAAGGAAAATAGACAAGGATGTAGAAGAAATGCAACTCATACTCCACTTAATCCATGTACGCATATAGTAGTTGAAGAAAGTAATAATATTGAATTCCATAGCTGGATAAGGATAAGGCTTTAACTATGCCAGATATGGCATCAGAAATCTCATTGTTTTTTTTCTCCTCTTTTCCCCCCTTGTATAGGAGAGATAATACATCGTAGCTCGCCCCTTCTCTTAACCCTTCTTGTTATCAGTGTAAAGTAGTCGACAATTGTCCGGACATAGTATCTAGACATTGCATGAAGATTATTCTTTTATTTAGTTTTCACTTTTGTCAGTCAAGTTCAAATTTGTAGTTGTTAGCAATCTTTTTCTAGCCACCACTTTAATTAGTAAGAGTCTTTAACTAGTTAAATTTTTTACTTTGTATCCACTAAACAATGTCATGATTTCAGGGAGCAATATGGGATCCTGATGGACGTATGATACTACTTGCTTTCTCTGAGTCTTCAGTATTGGGTTCAATTCATTTTGCATCTAAGCCTCCGTCATTAGGTATGTGAATCGTCTTTACAATTGCTGGGTCTACCAACAAGCTACTATAGAGTTTTCATCTGGGCCTCCGTCATGTTCTACAGTGAACTTGTGCACATTGTCTCGCATATTGCAACTGCCAGAATTGAGGTGTCTGGAAGTTTTCCTTATGAGATCTGTAGAAATAATATTTAGACAGTGAGAGTTTGGTGGAAAAAAAGGGAACGAACGGAAGTTTTCTGGAAGTTTCATGGCAGTTTGCCGATAATAAATTAATGATTAGATTAAGTCTTAATGATTTGTGATAATATCATCACTTGAAACTCTTTTCTCAGTTTTGATTCAGGTGCATTATGCAAGGTATTGAGTAATGTTTATTTAACTTAACGTCTTCACCTAATGTCTCTACAGGGACAATATTTTTATTGCCTATGTTGCCTATGTTGCCTGGTTAATGTGATGAATCTAGTTTTACTTTCTATTAAACTGCAAAATGTTCGCCAGCCATTAATGTGGATCTTCAGTTTTTACTCGTTTGTAGATCTGATGCATTCTCAATGATTTTTGTCTTCAGTTGCACATCTGCTAGCTGTTGACTTGCCGGAGATAACTACTTTGACGAACAGGTATATATGTTTCGTTTGTTAGACCGCCCATGACCAATATTGTTAACCATAAAATTTTGACAGCTGTGCATTATCCTTTCAGTCAGGGTATTGAGAAGATAGCATGGGATGCTTCAGGAGAGCGACTGGCTGTCTCTTTCAAGGATGGAGATGAATTATATAATGGCCTGATCGCAGTATATGATATTAAAAGGACTCCCCTGATTTGTCCATCATTGATGTGAGTTATTGACATTGTACTCCGACTCAAGTAAATTGGAAATTCAACTGACCTGTCTATGTAATTGTTTAATTTCTGTCCAGTGGCTTTATTAGAGGGCCTGGAGACAATCCAAAGCCAGCTGCATTTTCGTTCCATGGCAAGTTCAAGCAGGGACCTTTGCTTTCAGTGGTACGTTTCAATAGAATCCCTTGGCTTTAATAAATGCGGGTATTAATATGATTGTGTGAGATCTCATATTGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTATGGAAACCTCTCCTTAGCACAGATGTGTTTTAAAACCTTAAGGGGAAGCCCGTTAGGGAAAAAGCCCAAAGCGGACAATATCTGCTAGCGGTGGACTTGAGTTGTTACAAATGGTATCAGAGCCAGTCACCGAACGGTGTGTCAGCGAGGATTCTGCCCCAAGGGGGGTGGATTATGAGATCCCAGATTGGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCAATTTTAAAACCTTGAGGGGAACCCCGGAAGGGTAAAGCCTAAAAAGGACAATATCTGTTAGCATTAGCGGTGGACTTGAGTTGTTACACATTGAAACATAGGAACAGTGTAAGAATACTGTTTTACTTTCATCTTTTTTCACTTAAAAATTTGTTACGATGTTCAAGCTCGATTCCGCTAATTGTGCAGTGTTGGAGCAGCGGATTTTGCTGTACCTATCCTCTCATATTCCGCTCTCATGTTGTTCCTTAGTGGTGGTTCTCTTGAGCCCTAG

mRNA sequence

ATGGTTCCAGGGTTGGGAACACCCATTAGGCGTGGATTAGGGTGTGTTTCAACAATCAAGTGGTCGCCTTCTGGAGATTACTTTTTTGCAGCAAAATTGGATGGAACATTTTATCTTTGGGAAACGAACACATGGACATCTGAACAGTGGTCGACAACAAGTGGTTTTGTCACGGGAGCAATATGGGATCCTGATGGACGTATGATACTACTTGCTTTCTCTGAGTCTTCAGTATTGGGTTCAATTCATTTTGCATCTAAGCCTCCGTCATTAGTTGCACATCTGCTAGCTGTTGACTTGCCGGAGATAACTACTTTGACGAACAGACCGCCCATGACCAATATTGTTAACCATAAAATTTTGACAGCTGTGCATTATCCTTTCAGTCAGGGTATTGAGAAGATAGCATGGGATGCTTCAGGAGAGCGACTGGCTGTCTCTTTCAAGGATGGAGATGAATTATATAATGGCCTGATCGCAGTATATGATATTAAAAGGACTCCCCTGATTTGTCCATCATTGATTGGCTTTATTAGAGGGCCTGGAGACAATCCAAAGCCAGCTGCATTTTCGTTCCATGGCAATGTTGGAGCAGCGGATTTTGCTGTACCTATCCTCTCATATTCCGCTCTCATGTTGTTCCTTAGTGGTGGTTCTCTTGAGCCCTAG

Coding sequence (CDS)

ATGGTTCCAGGGTTGGGAACACCCATTAGGCGTGGATTAGGGTGTGTTTCAACAATCAAGTGGTCGCCTTCTGGAGATTACTTTTTTGCAGCAAAATTGGATGGAACATTTTATCTTTGGGAAACGAACACATGGACATCTGAACAGTGGTCGACAACAAGTGGTTTTGTCACGGGAGCAATATGGGATCCTGATGGACGTATGATACTACTTGCTTTCTCTGAGTCTTCAGTATTGGGTTCAATTCATTTTGCATCTAAGCCTCCGTCATTAGTTGCACATCTGCTAGCTGTTGACTTGCCGGAGATAACTACTTTGACGAACAGACCGCCCATGACCAATATTGTTAACCATAAAATTTTGACAGCTGTGCATTATCCTTTCAGTCAGGGTATTGAGAAGATAGCATGGGATGCTTCAGGAGAGCGACTGGCTGTCTCTTTCAAGGATGGAGATGAATTATATAATGGCCTGATCGCAGTATATGATATTAAAAGGACTCCCCTGATTTGTCCATCATTGATTGGCTTTATTAGAGGGCCTGGAGACAATCCAAAGCCAGCTGCATTTTCGTTCCATGGCAATGTTGGAGCAGCGGATTTTGCTGTACCTATCCTCTCATATTCCGCTCTCATGTTGTTCCTTAGTGGTGGTTCTCTTGAGCCCTAG

Protein sequence

MVPGLGTPIRRGLGCVSTIKWSPSGDYFFAAKLDGTFYLWETNTWTSEQWSTTSGFVTGAIWDPDGRMILLAFSESSVLGSIHFASKPPSLVAHLLAVDLPEITTLTNRPPMTNIVNHKILTAVHYPFSQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYDIKRTPLICPSLIGFIRGPGDNPKPAAFSFHGNVGAADFAVPILSYSALMLFLSGGSLEP

Homology

[Close]

BLAST of CmoCh14G004930 vs. ExPASy Swiss-Prot
Match: Q8GWR1 (Aladin OS=Arabidopsis thaliana OX=3702 GN=AAAS PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.2e-68
Identity = 125/192 (65.10%), Postives = 147/192 (76.56%), Query Frame = 0


Query: 4   GLGTPIRRGLGCVSTIKWSPSGDYFFAAKLDGTFYLWETNTWTSEQWSTT--SGFVTGAI 63
           G GTPIRRGLG +S +KWSP+GDYFFAA+ DGTF LWETNTWTSE WS +  SG VTGAI
Sbjct: 245 GAGTPIRRGLGGISMLKWSPTGDYFFAARFDGTFCLWETNTWTSEPWSLSSGSGSVTGAI 304

Query: 64  WDPDGRMILLAFSESSVLGSIHFASKPPSLVAHLLAVDLPEITTLTNRPPMTNIVNHKIL 123
           WDP+GR IL++FS+SS LGS+HF+SKPPSL AHLL V+LPEI +LT              
Sbjct: 305 WDPEGRFILISFSKSSTLGSVHFSSKPPSLDAHLLPVELPEIASLTG------------- 364

Query: 124 TAVHYPFSQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYDIKRTPLICPSLIGFIRGP 183
                   +GIEKIAWDASGERLAVS+K GDE Y GLIA+YD +RTP++  SL+GFIRGP
Sbjct: 365 -------CEGIEKIAWDASGERLAVSYKGGDENYKGLIAIYDTRRTPIVSASLVGFIRGP 416

Query: 184 GDNPKPAAFSFH 194
           G+NPK  +FSFH
Sbjct: 425 GENPKALSFSFH 416

[Close]

BLAST of CmoCh14G004930 vs. ExPASy Swiss-Prot
Match: Q9W351 (Aladin OS=Drosophila melanogaster OX=7227 GN=Aladin PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10
Identity = 48/148 (32.43%), Postives = 71/148 (47.97%), Query Frame = 0


Query: 4   GLGTPIRRGLGCVSTIKWSPSGDYFFAAKLDGTFYLWETN-TWTSEQW-STTSGFVTGAI 63
           G+  P++R     S +KWSP  D+ FAA +D  F +W  +  WT+E+W     G+V  A 
Sbjct: 264 GMMQPLKRLGPPGSLLKWSPDNDWLFAATVDRVFRVWNCHQQWTTERWVCGPGGYVQTAC 323

Query: 64  WDPDGRMILLAFSESSVLGSIHFASKPPSLVAHLLAVDLPEITTLTNRPPMTNIVNHKIL 123
           W P GR +L   S   +L  + F  +  SL++   + D  EI  + +    +   N    
Sbjct: 324 WSPCGRFLLFVSSAEPILYRLQFVQQ--SLLSS--SADEKEILPIADLNACSIDANR--- 383

Query: 124 TAVHYPFSQGIEKIAWDASGERLAVSFK 150
           T V  P  Q    +AWD  G  L V+FK
Sbjct: 384 TLVGGPAQQ----LAWDPHGNYLVVTFK 400

[Close]

BLAST of CmoCh14G004930 vs. ExPASy TrEMBL
Match: A0A6J1J094 (aladin OS=Cucurbita maxima OX=3661 GN=LOC111482293 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.6e-92
Identity = 171/191 (89.53%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 4   GLGTPIRRGLGCVSTIKWSPSGDYFFAAKLDGTFYLWETNTWTSEQWSTTSGFVTGAIWD 63
           GLGTPIRRGLGCVSTIKWSPSGDYFFAAKLDGTFYLWETNTWTSEQWSTTSGFVTGAIWD
Sbjct: 249 GLGTPIRRGLGCVSTIKWSPSGDYFFAAKLDGTFYLWETNTWTSEQWSTTSGFVTGAIWD 308

Query: 64  PDGRMILLAFSESSVLGSIHFASKPPSLVAHLLAVDLPEITTLTNRPPMTNIVNHKILTA 123
           PDGRMILLAFSESSVLGSIHFASKPPSLVAHLLAVDLPEITTLTN               
Sbjct: 309 PDGRMILLAFSESSVLGSIHFASKPPSLVAHLLAVDLPEITTLTN--------------- 368

Query: 124 VHYPFSQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYDIKRTPLICPSLIGFIRGPGD 183
                SQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYDIKRTPLICPSLIGFIRGPGD
Sbjct: 369 -----SQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYDIKRTPLICPSLIGFIRGPGD 419

Query: 184 NPKPAAFSFHG 195
           NPKPAAFSFHG
Sbjct: 429 NPKPAAFSFHG 419

[Close]

BLAST of CmoCh14G004930 vs. ExPASy TrEMBL
Match: A0A6J1F6N8 (aladin OS=Cucurbita moschata OX=3662 GN=LOC111441364 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.6e-92
Identity = 171/191 (89.53%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 4   GLGTPIRRGLGCVSTIKWSPSGDYFFAAKLDGTFYLWETNTWTSEQWSTTSGFVTGAIWD 63
           GLGTPIRRGLGCVSTIKWSPSGDYFFAAKLDGTFYLWETNTWTSEQWSTTSGFVTGAIWD
Sbjct: 249 GLGTPIRRGLGCVSTIKWSPSGDYFFAAKLDGTFYLWETNTWTSEQWSTTSGFVTGAIWD 308

Query: 64  PDGRMILLAFSESSVLGSIHFASKPPSLVAHLLAVDLPEITTLTNRPPMTNIVNHKILTA 123
           PDGRMILLAFSESSVLGSIHFASKPPSLVAHLLAVDLPEITTLTN               
Sbjct: 309 PDGRMILLAFSESSVLGSIHFASKPPSLVAHLLAVDLPEITTLTN--------------- 368

Query: 124 VHYPFSQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYDIKRTPLICPSLIGFIRGPGD 183
                SQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYDIKRTPLICPSLIGFIRGPGD
Sbjct: 369 -----SQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYDIKRTPLICPSLIGFIRGPGD 419

Query: 184 NPKPAAFSFHG 195
           NPKPAAFSFHG
Sbjct: 429 NPKPAAFSFHG 419

[Close]

BLAST of CmoCh14G004930 vs. ExPASy TrEMBL
Match: A0A6J1DEW4 (aladin isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019858 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.4e-89
Identity = 163/191 (85.34%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 4   GLGTPIRRGLGCVSTIKWSPSGDYFFAAKLDGTFYLWETNTWTSEQWSTTSGFVTGAIWD 63
           GLGTPIRRGLGCVSTIKWSP+GDYFFAAK DGTFYLWETNTWTSEQWSTTSGFVTGAIWD
Sbjct: 249 GLGTPIRRGLGCVSTIKWSPTGDYFFAAKFDGTFYLWETNTWTSEQWSTTSGFVTGAIWD 308

Query: 64  PDGRMILLAFSESSVLGSIHFASKPPSLVAHLLAVDLPEITTLTNRPPMTNIVNHKILTA 123
           PDGRMILLAFS+SSVLGSIHFASKPPSLVAHLLAVDLPEITTLTN               
Sbjct: 309 PDGRMILLAFSDSSVLGSIHFASKPPSLVAHLLAVDLPEITTLTN--------------- 368

Query: 124 VHYPFSQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYDIKRTPLICPSLIGFIRGPGD 183
                S+GIEKIAWD SGERLAVSFKDGDELYNGLIAVYD+KRTPL+CPSLIGFIRGPGD
Sbjct: 369 -----SKGIEKIAWDTSGERLAVSFKDGDELYNGLIAVYDVKRTPLVCPSLIGFIRGPGD 419

Query: 184 NPKPAAFSFHG 195
           NPKP AFSFHG
Sbjct: 429 NPKPVAFSFHG 419

[Close]

BLAST of CmoCh14G004930 vs. ExPASy TrEMBL
Match: A0A1S3B899 (aladin OS=Cucumis melo OX=3656 GN=LOC103486859 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.8e-88
Identity = 162/191 (84.82%), Postives = 167/191 (87.43%), Query Frame = 0


Query: 4   GLGTPIRRGLGCVSTIKWSPSGDYFFAAKLDGTFYLWETNTWTSEQWSTTSGFVTGAIWD 63
           GLGTPIRRGLGCVSTIKWSP+GDYFFAAK DGTFYLWETN WTSEQWS+TSGFVTGAIWD
Sbjct: 249 GLGTPIRRGLGCVSTIKWSPTGDYFFAAKFDGTFYLWETNAWTSEQWSSTSGFVTGAIWD 308

Query: 64  PDGRMILLAFSESSVLGSIHFASKPPSLVAHLLAVDLPEITTLTNRPPMTNIVNHKILTA 123
           P+GRMILLAFS+SSVLGSIHFASKPPSLVAHLL VDLPEITTLTN               
Sbjct: 309 PEGRMILLAFSDSSVLGSIHFASKPPSLVAHLLPVDLPEITTLTN--------------- 368

Query: 124 VHYPFSQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYDIKRTPLICPSLIGFIRGPGD 183
                SQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYD+KRTPLICPSLIGFIRGPGD
Sbjct: 369 -----SQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYDVKRTPLICPSLIGFIRGPGD 419

Query: 184 NPKPAAFSFHG 195
           NPKP AFSFHG
Sbjct: 429 NPKPVAFSFHG 419

[Close]

BLAST of CmoCh14G004930 vs. ExPASy TrEMBL
Match: A0A5A7UJP0 (Aladin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006370 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.9e-87
Identity = 161/190 (84.74%), Postives = 166/190 (87.37%), Query Frame = 0


Query: 5   LGTPIRRGLGCVSTIKWSPSGDYFFAAKLDGTFYLWETNTWTSEQWSTTSGFVTGAIWDP 64
           LGTPIRRGLGCVSTIKWSP+GDYFFAAK DGTFYLWETN WTSEQWS+TSGFVTGAIWDP
Sbjct: 238 LGTPIRRGLGCVSTIKWSPTGDYFFAAKFDGTFYLWETNAWTSEQWSSTSGFVTGAIWDP 297

Query: 65  DGRMILLAFSESSVLGSIHFASKPPSLVAHLLAVDLPEITTLTNRPPMTNIVNHKILTAV 124
           +GRMILLAFS+SSVLGSIHFASKPPSLVAHLL VDLPEITTLTN                
Sbjct: 298 EGRMILLAFSDSSVLGSIHFASKPPSLVAHLLPVDLPEITTLTN---------------- 357

Query: 125 HYPFSQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYDIKRTPLICPSLIGFIRGPGDN 184
               SQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYD+KRTPLICPSLIGFIRGPGDN
Sbjct: 358 ----SQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYDVKRTPLICPSLIGFIRGPGDN 407

Query: 185 PKPAAFSFHG 195
           PKP AFSFHG
Sbjct: 418 PKPVAFSFHG 407

[Close]

BLAST of CmoCh14G004930 vs. TAIR 10
Match: AT3G56900.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 259.6 bits (662), Expect = 2.3e-69
Identity = 125/192 (65.10%), Postives = 147/192 (76.56%), Query Frame = 0


Query: 4   GLGTPIRRGLGCVSTIKWSPSGDYFFAAKLDGTFYLWETNTWTSEQWSTT--SGFVTGAI 63
           G GTPIRRGLG +S +KWSP+GDYFFAA+ DGTF LWETNTWTSE WS +  SG VTGAI
Sbjct: 245 GAGTPIRRGLGGISMLKWSPTGDYFFAARFDGTFCLWETNTWTSEPWSLSSGSGSVTGAI 304

Query: 64  WDPDGRMILLAFSESSVLGSIHFASKPPSLVAHLLAVDLPEITTLTNRPPMTNIVNHKIL 123
           WDP+GR IL++FS+SS LGS+HF+SKPPSL AHLL V+LPEI +LT              
Sbjct: 305 WDPEGRFILISFSKSSTLGSVHFSSKPPSLDAHLLPVELPEIASLTG------------- 364

Query: 124 TAVHYPFSQGIEKIAWDASGERLAVSFKDGDELYNGLIAVYDIKRTPLICPSLIGFIRGP 183
                   +GIEKIAWDASGERLAVS+K GDE Y GLIA+YD +RTP++  SL+GFIRGP
Sbjct: 365 -------CEGIEKIAWDASGERLAVSYKGGDENYKGLIAIYDTRRTPIVSASLVGFIRGP 416

Query: 184 GDNPKPAAFSFH 194
           G+NPK  +FSFH
Sbjct: 425 GENPKALSFSFH 416

The following BLAST results are available for this feature:

BLAST of CmoCh14G004930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWR1	3.2e-68	65.10	Aladin OS=Arabidopsis thaliana OX=3702 GN=AAAS PE=1 SV=1	[more]
Q9W351	2.3e-10	32.43	Aladin OS=Drosophila melanogaster OX=7227 GN=Aladin PE=2 SV=1	[more]

BLAST of CmoCh14G004930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J094	5.6e-92	89.53	aladin OS=Cucurbita maxima OX=3661 GN=LOC111482293 PE=4 SV=1	[more]
A0A6J1F6N8	5.6e-92	89.53	aladin OS=Cucurbita moschata OX=3662 GN=LOC111441364 PE=4 SV=1	[more]
A0A6J1DEW4	3.4e-89	85.34	aladin isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019858 PE=4 SV=1	[more]
A0A1S3B899	3.8e-88	84.82	aladin OS=Cucumis melo OX=3656 GN=LOC103486859 PE=4 SV=1	[more]
A0A5A7UJP0	1.9e-87	84.74	Aladin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006370 PE=4 S...	[more]

BLAST of CmoCh14G004930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56900.1	2.3e-69	65.10	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 7..195 e-value: 1.2E-12 score: 49.5
IPR045139	Aladin	PANTHER	PTHR14494	ALADIN/ADRACALIN/AAAS	coord: 4..195
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 16..44 score: 9.271977
None	No IPR available	SUPERFAMILY	82171	DPP6 N-terminal domain-like	coord: 12..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G004930.1	CmoCh14G004930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005515	protein binding