CmoCh14G004410 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G004410
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Flavin-containing monooxygenase
Location	Cmo_Chr14: 2101184 .. 2102358 (+)
RNA-Seq Expression	CmoCh14G004410
Synteny	CmoCh14G004410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTCAAACCAAAACCCTCTTAATCATACCTGTAGAAAACCAGAGAAATTCGTCTCTCGCTTTCAAGAACCAACGAAATGGGTCATTTCAACAGCTTAATTTGTAAGCAGAATGAAGATAAGATCTTATAGAAGAAGCTAAGGATAATGAAAACCGACCCACAAGAGAAGCAACTAACCAGAAGCCATAGTAAGTAAAAAAAAACAGAGTATATGAACAGAAGAATTTGCAGAATCAAAGAAGATAAAAGAAATGGGGCAAAAATCAAAGAGGGAGGAAGAAGAAAGCAAATCAATCTTGTTATGGAACAAGAAAGAGATAGAAAGAGAAAGAGGGCAAATCGGGGTTTTCCCACTCGCGGCCTTAAGGATTTGCTTTTGCTGCTATTACAGAAGCGCCATTGATATCCATCCTCTTTGCTTTAATTACATTAAAACGAAGACCGAGACAAAGCTTTCTATTTTGGGGCGACATTTCGCCAATACTCACACTGCTCTTAGCTTAGCGGAGCCCATTTTCGGTATTATAAAAATTAAATTAAATTTTTTACAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTTAAATTTGTTTTTAAAATTAAAATTACCATATTGCCCTTAATTTAGAATGGGATTGATTAGTTGTTTTGGATTCTAATTTGTAATTTTATTTTGAAATAATTTGGGTATTTTGGTAATTTAGTTTTTTTTATATTGATGTAGCAAATAGTACCTATAAATTTGAGGCTAAATTACAAAAGAATTACCTTTAAATTTGTCCTTTTTAGTTAAAATTACCACATTGCCCTTAATCTAGAAAGTGATTGATTAGTTGTTTTGCATGCTAATTTCTAATTTTATTTTGAAATAGCGTCGGGTATTTTGGTAATTTAGTTTTTTATATTGATGCAACAATTAATATTAAAAGCATGTTTTTTTTAATTATTATTATTATTTTAGGAGGGAGAAATGTTTAGGAAAGAAGATGGCTTGCCAAGGAAGCCGTTTGGGTGGAAAGGGAAAAATGGGCTATATGCTGCGGGATTCACAAATCGTGGATTACTCGGCTCATCAATGGATGCCAAGAGAATCGCCGAGGACATCGAACGGTGCTGGAAAGCCGACGCCAAGTTTTGTACTCCCTTCACGCAATCTCTACCCTCCACGTAG

mRNA sequence

ATGGAAGTTCAAACCAAAACCCTCTTAATCATACCTGTAGAAAACCAGAGAAATTCGTCTCTCGCTTTCAAGAACCAACGAAATGGGTCATTTCAACAGCTTAATTTAAGCGCCATTGATATCCATCCTCTTTGCTTTAATTACATTAAAACGAAGACCGAGACAAAGCTTTCTATTTTGGGGCGACATTTCGCCAATACTCACACTGCTCTTAGCTTAGCGGAGCCCATTTTCGCGTCGGGTATTTTGGAGGGAGAAATGTTTAGGAAAGAAGATGGCTTGCCAAGGAAGCCGTTTGGGTGGAAAGGGAAAAATGGGCTATATGCTGCGGGATTCACAAATCGTGGATTACTCGGCTCATCAATGGATGCCAAGAGAATCGCCGAGGACATCGAACGGTGCTGGAAAGCCGACGCCAAGTTTTGTACTCCCTTCACGCAATCTCTACCCTCCACGTAG

Coding sequence (CDS)

ATGGAAGTTCAAACCAAAACCCTCTTAATCATACCTGTAGAAAACCAGAGAAATTCGTCTCTCGCTTTCAAGAACCAACGAAATGGGTCATTTCAACAGCTTAATTTAAGCGCCATTGATATCCATCCTCTTTGCTTTAATTACATTAAAACGAAGACCGAGACAAAGCTTTCTATTTTGGGGCGACATTTCGCCAATACTCACACTGCTCTTAGCTTAGCGGAGCCCATTTTCGCGTCGGGTATTTTGGAGGGAGAAATGTTTAGGAAAGAAGATGGCTTGCCAAGGAAGCCGTTTGGGTGGAAAGGGAAAAATGGGCTATATGCTGCGGGATTCACAAATCGTGGATTACTCGGCTCATCAATGGATGCCAAGAGAATCGCCGAGGACATCGAACGGTGCTGGAAAGCCGACGCCAAGTTTTGTACTCCCTTCACGCAATCTCTACCCTCCACGTAG

Protein sequence

MEVQTKTLLIIPVENQRNSSLAFKNQRNGSFQQLNLSAIDIHPLCFNYIKTKTETKLSILGRHFANTHTALSLAEPIFASGILEGEMFRKEDGLPRKPFGWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKADAKFCTPFTQSLPST

Homology

[Close]

BLAST of CmoCh14G004410 vs. ExPASy Swiss-Prot
Match: Q8VZ59 (Indole-3-pyruvate monooxygenase YUCCA6 OS=Arabidopsis thaliana OX=3702 GN=YUC6 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 0


Query: 80  SGILEGEMFRKEDGLPRKPF--GWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKA 139
           S + E +MF K+DG P + F  GW+G+ GLYA GFT RG+ G+SMDAKRIAEDI +CWK 
Sbjct: 351 SWLKENKMFSKKDGFPIQEFPEGWRGECGLYAVGFTKRGISGASMDAKRIAEDIHKCWKQ 410

[Close]

BLAST of CmoCh14G004410 vs. ExPASy Swiss-Prot
Match: Q9SVQ1 (Indole-3-pyruvate monooxygenase YUCCA2 OS=Arabidopsis thaliana OX=3702 GN=YUC2 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.8e-12
Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 76  PIFASGILEGEMFRKEDGLPRKPF--GWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIE 133
           P++  G+    MF ++DG P KPF  GWKG++GLYA GFT  GLLG+++DAK+IAEDIE
Sbjct: 346 PMWLKGV---NMFSEKDGFPHKPFPNGWKGESGLYAVGFTKLGLLGAAIDAKKIAEDIE 401

[Close]

BLAST of CmoCh14G004410 vs. ExPASy Swiss-Prot
Match: O23024 (Probable indole-3-pyruvate monooxygenase YUCCA3 OS=Arabidopsis thaliana OX=3702 GN=YUC3 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.2e-11
Identity = 41/114 (35.96%), Postives = 57/114 (50.00%), Query Frame = 0


Query: 29  GSFQQLNLSAIDIHPLCFNYIKTKTETKLSILGRHFANTHTALSLAEPIFASGILEGEMF 88
           G+  ++    I I P    + K K E    I GR        L+          L+   F
Sbjct: 310 GALPKIRSGKIKIVPGIIKFGKGKVEL---IDGRVLEIDSVILATGYRSNVPSWLKDNDF 369

Query: 89  RKEDGLPRKPF--GWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKADAK 141
             +DG+P+ PF  GWKG+ GLYA GFT +GL G+S+DA  +A DI   WK ++K
Sbjct: 370 FSDDGIPKNPFPNGWKGEAGLYAVGFTRKGLFGASLDAMSVAHDIANRWKEESK 420

[Close]

BLAST of CmoCh14G004410 vs. ExPASy Swiss-Prot
Match: O64489 (Probable indole-3-pyruvate monooxygenase YUCCA9 OS=Arabidopsis thaliana OX=3702 GN=YUC9 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.2e-11
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 80  SGILEGEMFRKEDGLPRKPF--GWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKA 139
           S + E E F K +G P+ PF   WKGK+GLYAAGFT +GL G+S+DA  IA+DI   W+ 
Sbjct: 343 SWLQESEFFSK-NGFPKSPFPNAWKGKSGLYAAGFTRKGLAGASVDAVNIAQDIGNVWRE 402

Query: 140 DAK 141
           + K
Sbjct: 403 ETK 404

[Close]

BLAST of CmoCh14G004410 vs. ExPASy Swiss-Prot
Match: Q9LKC0 (Probable indole-3-pyruvate monooxygenase YUCCA5 OS=Arabidopsis thaliana OX=3702 GN=YUC5 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-10
Identity = 32/63 (50.79%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 80  SGILEGEMFRKEDGLPRKPF--GWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKA 139
           S + E ++F K +G P+ PF   WKGK+GLYAAGFT +GL G+S DA  IA+DI   W+ 
Sbjct: 346 SWLQENDLFSK-NGFPKSPFPNAWKGKSGLYAAGFTRKGLAGASADAVNIAQDIGNVWRE 405

Query: 140 DAK 141
           + K
Sbjct: 406 ETK 407

[Close]

BLAST of CmoCh14G004410 vs. ExPASy TrEMBL
Match: A0A6J1HFC9 (Flavin-containing monooxygenase OS=Cucurbita moschata OX=3662 GN=LOC111462924 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.8e-33
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 80  SGILEGEMFRKEDGLPRKPFGWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKADA 139
           S + EGEMFRKEDGLPRKPFGWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKADA
Sbjct: 366 SWLKEGEMFRKEDGLPRKPFGWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKADA 425

Query: 140 KFCTPFTQSLPST 153
           KFCTPFTQSLPST
Sbjct: 426 KFCTPFTQSLPST 438

[Close]

BLAST of CmoCh14G004410 vs. ExPASy TrEMBL
Match: A0A6J1K7Y1 (Flavin-containing monooxygenase OS=Cucurbita maxima OX=3661 GN=LOC111491978 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 80  SGILEGEMFRKEDGLPRKPFGWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKADA 139
           S + EGEMF KEDGLPRKPFGWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKADA
Sbjct: 362 SWLKEGEMFGKEDGLPRKPFGWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKADA 421

Query: 140 KFCTPFTQSLPST 153
           KFCTPFTQSLPST
Sbjct: 422 KFCTPFTQSLPST 434

[Close]

BLAST of CmoCh14G004410 vs. ExPASy TrEMBL
Match: A0A0F6PC96 (Flavin-containing monooxygenase OS=Cucumis melo OX=3656 GN=YUC6 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.5e-24
Identity = 58/75 (77.33%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 80  SGILEGEMFRKEDGLPRKPF--GWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKA 139
           S + EGEMF KEDG+PR PF  GWKG++GLYA GFT RGLLG+SMDAKRIAEDIERCWKA
Sbjct: 360 SWLKEGEMFGKEDGMPRMPFPKGWKGESGLYAVGFTKRGLLGTSMDAKRIAEDIERCWKA 419

Query: 140 DAKFCTPFTQSLPST 153
           DAK CTP  QS PST
Sbjct: 420 DAKLCTPTMQSPPST 434

[Close]

BLAST of CmoCh14G004410 vs. ExPASy TrEMBL
Match: A0A5A7VGK6 (Flavin-containing monooxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003510 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.5e-24
Identity = 58/75 (77.33%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 80  SGILEGEMFRKEDGLPRKPF--GWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKA 139
           S + EGEMF KEDG+PR PF  GWKG++GLYA GFT RGLLG+SMDAKRIAEDIERCWKA
Sbjct: 339 SWLKEGEMFGKEDGMPRMPFPKGWKGESGLYAVGFTKRGLLGTSMDAKRIAEDIERCWKA 398

Query: 140 DAKFCTPFTQSLPST 153
           DAK CTP  QS PST
Sbjct: 399 DAKLCTPTMQSPPST 413

[Close]

BLAST of CmoCh14G004410 vs. ExPASy TrEMBL
Match: A0A0A0LLL8 (Flavin-containing monooxygenase OS=Cucumis sativus OX=3659 GN=Csa_2G375750 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.5e-24
Identity = 58/75 (77.33%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 80  SGILEGEMFRKEDGLPRKPF--GWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKA 139
           S + EGEMF KEDG+PR PF  GWKG++GLYA GFT RGLLG+SMDAKRIAEDIERCWKA
Sbjct: 360 SWLKEGEMFGKEDGMPRMPFPKGWKGESGLYAVGFTKRGLLGTSMDAKRIAEDIERCWKA 419

Query: 140 DAKFCTPFTQSLPST 153
           DAK CTP  QS PST
Sbjct: 420 DAKLCTPTMQSPPST 434

[Close]

BLAST of CmoCh14G004410 vs. TAIR 10
Match: AT5G25620.1 (Flavin-binding monooxygenase family protein )

HSP 1 Score: 81.3 bits (199), Expect = 7.6e-16
Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 0


Query: 80  SGILEGEMFRKEDGLPRKPF--GWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKA 139
           S + E +MF K+DG P + F  GW+G+ GLYA GFT RG+ G+SMDAKRIAEDI +CWK 
Sbjct: 351 SWLKENKMFSKKDGFPIQEFPEGWRGECGLYAVGFTKRGISGASMDAKRIAEDIHKCWKQ 410

[Close]

BLAST of CmoCh14G004410 vs. TAIR 10
Match: AT5G25620.2 (Flavin-binding monooxygenase family protein )

HSP 1 Score: 81.3 bits (199), Expect = 7.6e-16
Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 0


Query: 80  SGILEGEMFRKEDGLPRKPF--GWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKA 139
           S + E +MF K+DG P + F  GW+G+ GLYA GFT RG+ G+SMDAKRIAEDI +CWK 
Sbjct: 343 SWLKENKMFSKKDGFPIQEFPEGWRGECGLYAVGFTKRGISGASMDAKRIAEDIHKCWKQ 402

[Close]

BLAST of CmoCh14G004410 vs. TAIR 10
Match: AT4G13260.1 (Flavin-binding monooxygenase family protein )

HSP 1 Score: 72.8 bits (177), Expect = 2.7e-13
Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 76  PIFASGILEGEMFRKEDGLPRKPF--GWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIE 133
           P++  G+    MF ++DG P KPF  GWKG++GLYA GFT  GLLG+++DAK+IAEDIE
Sbjct: 346 PMWLKGV---NMFSEKDGFPHKPFPNGWKGESGLYAVGFTKLGLLGAAIDAKKIAEDIE 401

[Close]

BLAST of CmoCh14G004410 vs. TAIR 10
Match: AT1G04610.1 (YUCCA 3 )

HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12
Identity = 41/114 (35.96%), Postives = 57/114 (50.00%), Query Frame = 0


Query: 29  GSFQQLNLSAIDIHPLCFNYIKTKTETKLSILGRHFANTHTALSLAEPIFASGILEGEMF 88
           G+  ++    I I P    + K K E    I GR        L+          L+   F
Sbjct: 310 GALPKIRSGKIKIVPGIIKFGKGKVEL---IDGRVLEIDSVILATGYRSNVPSWLKDNDF 369

Query: 89  RKEDGLPRKPF--GWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKADAK 141
             +DG+P+ PF  GWKG+ GLYA GFT +GL G+S+DA  +A DI   WK ++K
Sbjct: 370 FSDDGIPKNPFPNGWKGEAGLYAVGFTRKGLFGASLDAMSVAHDIANRWKEESK 420

[Close]

BLAST of CmoCh14G004410 vs. TAIR 10
Match: AT1G04180.1 (YUCCA 9 )

HSP 1 Score: 68.6 bits (166), Expect = 5.1e-12
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 80  SGILEGEMFRKEDGLPRKPF--GWKGKNGLYAAGFTNRGLLGSSMDAKRIAEDIERCWKA 139
           S + E E F K +G P+ PF   WKGK+GLYAAGFT +GL G+S+DA  IA+DI   W+ 
Sbjct: 343 SWLQESEFFSK-NGFPKSPFPNAWKGKSGLYAAGFTRKGLAGASVDAVNIAQDIGNVWRE 402

Query: 140 DAK 141
           + K
Sbjct: 403 ETK 404

The following BLAST results are available for this feature:

BLAST of CmoCh14G004410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ59	1.1e-14	60.66	Indole-3-pyruvate monooxygenase YUCCA6 OS=Arabidopsis thaliana OX=3702 GN=YUC6 P...	[more]
Q9SVQ1	3.8e-12	57.63	Indole-3-pyruvate monooxygenase YUCCA2 OS=Arabidopsis thaliana OX=3702 GN=YUC2 P...	[more]
O23024	3.2e-11	35.96	Probable indole-3-pyruvate monooxygenase YUCCA3 OS=Arabidopsis thaliana OX=3702 ...	[more]
O64489	7.2e-11	52.38	Probable indole-3-pyruvate monooxygenase YUCCA9 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LKC0	1.6e-10	50.79	Probable indole-3-pyruvate monooxygenase YUCCA5 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmoCh14G004410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFC9	1.8e-33	95.89	Flavin-containing monooxygenase OS=Cucurbita moschata OX=3662 GN=LOC111462924 PE...	[more]
A0A6J1K7Y1	1.2e-32	94.52	Flavin-containing monooxygenase OS=Cucurbita maxima OX=3661 GN=LOC111491978 PE=3...	[more]
A0A0F6PC96	1.5e-24	77.33	Flavin-containing monooxygenase OS=Cucumis melo OX=3656 GN=YUC6 PE=2 SV=1	[more]
A0A5A7VGK6	1.5e-24	77.33	Flavin-containing monooxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A0A0LLL8	1.5e-24	77.33	Flavin-containing monooxygenase OS=Cucumis sativus OX=3659 GN=Csa_2G375750 PE=3 ...	[more]

BLAST of CmoCh14G004410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25620.1	7.6e-16	60.66	Flavin-binding monooxygenase family protein	[more]
AT5G25620.2	7.6e-16	60.66	Flavin-binding monooxygenase family protein	[more]
AT4G13260.1	2.7e-13	57.63	Flavin-binding monooxygenase family protein	[more]
AT1G04610.1	2.3e-12	35.96	YUCCA 3	[more]
AT1G04180.1	5.1e-12	52.38	YUCCA 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR43539	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	coord: 83..144
None	No IPR available	PANTHER	PTHR43539:SF38	INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6	coord: 83..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G004410.1	CmoCh14G004410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0004499	N,N-dimethylaniline monooxygenase activity