CmoCh14G003520 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G003520
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	nudix hydrolase 26, chloroplastic-like
Location	Cmo_Chr14: 1593901 .. 1595953 (+)
RNA-Seq Expression	CmoCh14G003520
Synteny	CmoCh14G003520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCGGAGAGCATTTTGTTTTCAATGCCAGCGTTTCGTCTCAACAGCATCACATTCTCCGGTGGATTCTTCTTATTCGGTTGATTCGTCTTTGCCTTCGTCTTCGTCGCTGACGGGAGGTAGTATTCGTCTTCGTTGTTGTCGGTGACCTTCCGCCTCCTCTCGCGTCTCGAACGTTTCAAAACAACAAGAAAGAAGCTGTTCTTCTCGCAGGAAATTGCGCCGAAGTTGACCTTCCCGGTGATGGGGATTCTCCGCCGAATCTTCGTCGAGAAATCCAGAGAGATCTTGTACTCGGCGAGGTAAACCGTGAATTGGTGCGAAGAGATGCCGATCATCTTACTCAAATCCGACTGAAAATTCTTGAAATCTGTCGAAGAAGAGACGATGACGGAACCGATGGGGACATCTTGCTCGCCGTCGTGGAAAACAATCGGGAACGAAACGCCTCCAGCGGTCTCCACCATCGCCGCTACAAGTGAATGAATTCTTGTTCAATTGCGGAACAGAAGAAAGAATCTCGTAAAGAAGGAAGAAGAAGAAAGAAGAAGAAAGAAGAAGAAGAGGGTTTTAGAGAGAAATCTTGAAGGAGGAGGCTATGGGGGCTTTTACAGAGTGGGTTTTAGGTTTTTATGGTAAGAAGGAGAAGGCGGTGAGGGTATTTTTGGAATAAAATATCAGATTTGGGGCTTTGGTACTAAGGAAGCAAAATAGAAGAACTTGGAAGGAAATTTCAAAACGCCAAAAGAGACTTGGGAATCAAGTAAACGGAAACGACAGCGTAATGGTTGCTTTGAGTGTGTTTGGACCAAATTGCCCCTCTTTTTCAATTGATGTCTCGTCAACGCCTCATTGGAGGGGGATTTCATCGTGTTGCTGTCTCTTCCGGCCTTCGTCTTCTTCTTCATCATCCATGGAGTTTCCTCCAGAAGGTTACAGAAGAAACGTTGGAATTTGTCTCTTTAATCCTTCTGGAAAAGTAATTTCTCTTCCCCTTCCTCGCCTTCTTCTTTCTCTCCCATCTGTTTTCTTCTGTTGATGATAATTGTTTTCTCTTTCGCAGATTTTTGCAGCTTCGAGGCTGAACAGGCCTGAAGTCTGGGAAATGCCTCAGGTAATTTCTATTCCGACGTATTTCGAACTTTGTTCATTGGGAAACAGGAAAGTATCGTCTCGCTGCTTTATTCCGTGCGAATTAGGGCACATAATTTATAGGTTCCATCTCTGATTTCTTTGTGGGAATATCCGGAAATTCTTTTGAAGGGCTCCTCAGATTTTCTTACACGCGAGTGAGAAATTCGAGGATCCTCTCAAGAGAAGGGGATTTGTGCAAAATTGAATCCATCTCTCTCGAATCTTCTCTTTGAACATATTCTTGGTGAAATCCTTGCAATGGCTGGAACATTTCAAGTGAAAAATCTTTCTATGCTGCTATGGTCTCTTTCCATTTGGGAACTGTATTACCTTTCAGAAATCTGTTTATGGTATTGATGGAAACATTGACAATTTTGTGTGTTTCTTATCTTTTCAATCATGAGACTGAGAGGTGTTAGAAATGATGTATTTTATCTACATCTGCATTGTATTGTATCCCTAAATGATATAGGCTTTATTACTGTCTTGCGGGGCTTGAAGGTAGTGGAGGATCCTTAGATTTGTTTTCCTTGAAAATGATTTGCCATCATACAGGGTGGTGTAAATGAAGGCGAAGATTTCACTACGGCAGCCAAGAGAGAACTCACTGAAGAAACTGGAGTAGTTTCTGCAGAAATTATTGCAGAGGTATGCATTTTGAGATGCCTCCAGCCTCTATATCTCGTTTTTCATTACATAGAAAAATGAAATCCAGCTTCATTGAAATCAGGACTGATTCGTTCTTTGGTTAAATATGTAGCTACCCTACTGGCTTACTTACGATTTCTCGCCCGAAACCAGCATCAAACTCAGCAAACACTGGGGAGTAAGATACAAAGGCCAAACCCAAAAGTGGTATTGTCACCTGAAAATCTGGCTTCTGTATCCTTTTGATGTTAAGGAACCTCCTTTTTAA

mRNA sequence

ATGAAGCCGGAGAGCATTTTGTTTTCAATGCCAGCGTTTCGTCTCAACAGCATCACATTCTCCGTATTCGTCTTCGTTGTTGTCGGTGACCTTCCGCCTCCTCTCGCGTCTCGAACGTTTCAAAACAACAAGAAAGAAGCTGTTCTTCTCGCAGGAAATTGCGCCGAAGTTGACCTTCCCGGTGATGGGGATTCTCCGCCGAATCTTCGTCGAGAAATCCAGAGAGATCTTGTACTCGGCGAGGTAAACCGTGAATTGGTGCGAAGAGATGCCGATCATCTTACTCAAATCCGACTGAAAATTCTTGAAATCTGTCGAAGAAGAGACGATGACGGAACCGATGGGGACATCTTGCTCGCCGTCGTGGAAAACAATCGGGAACGAAACGCCTCCAGCGGTCTCCACCATCGCCGCTACAAAAGAAAGAATCTCGTAAAGAAGGAAGAAGAAGAAAGAAGAAGAAAGAAGAAGAAGAGGGTTTTAGAGAGAAATCTTGAAGGAGGAGGCTATGGGGGCTTTTACAGAGTGGGTTTTAGATTTGGGGCTTTGGTACTAAGGAAGCAAAATAGAAGAACTTGGAAGGAAATTTCAAAACGCCAAAAGAGACTTGGGAATCAAGTAAACGGAAACGACAGCGTAATGGTTGCTTTGAGTGTGTTTGGACCAAATTGCCCCTCTTTTTCAATTGATGTCTCGTCAACGCCTCATTGGAGGGGGATTTCATCGTGTTGCTGTCTCTTCCGGCCTTCGTCTTCTTCTTCATCATCCATGGAGTTTCCTCCAGAAGGTTACAGAAGAAACGTTGGAATTTGTCTCTTTAATCCTTCTGGAAAAATTTTTGCAGCTTCGAGGCTGAACAGGCCTGAAGTCTGGGAAATGCCTCAGGGTGGTGTAAATGAAGGCGAAGATTTCACTACGGCAGCCAAGAGAGAACTCACTGAAGAAACTGGAGTAGTTTCTGCAGAAATTATTGCAGAGCTACCCTACTGGCTTACTTACGATTTCTCGCCCGAAACCAGCATCAAACTCAGCAAACACTGGGGAGTAAGATACAAAGGCCAAACCCAAAAGTGGTATTGTCACCTGAAAATCTGGCTTCTGTATCCTTTTGATGTTAAGGAACCTCCTTTTTAA

Coding sequence (CDS)

ATGAAGCCGGAGAGCATTTTGTTTTCAATGCCAGCGTTTCGTCTCAACAGCATCACATTCTCCGTATTCGTCTTCGTTGTTGTCGGTGACCTTCCGCCTCCTCTCGCGTCTCGAACGTTTCAAAACAACAAGAAAGAAGCTGTTCTTCTCGCAGGAAATTGCGCCGAAGTTGACCTTCCCGGTGATGGGGATTCTCCGCCGAATCTTCGTCGAGAAATCCAGAGAGATCTTGTACTCGGCGAGGTAAACCGTGAATTGGTGCGAAGAGATGCCGATCATCTTACTCAAATCCGACTGAAAATTCTTGAAATCTGTCGAAGAAGAGACGATGACGGAACCGATGGGGACATCTTGCTCGCCGTCGTGGAAAACAATCGGGAACGAAACGCCTCCAGCGGTCTCCACCATCGCCGCTACAAAAGAAAGAATCTCGTAAAGAAGGAAGAAGAAGAAAGAAGAAGAAAGAAGAAGAAGAGGGTTTTAGAGAGAAATCTTGAAGGAGGAGGCTATGGGGGCTTTTACAGAGTGGGTTTTAGATTTGGGGCTTTGGTACTAAGGAAGCAAAATAGAAGAACTTGGAAGGAAATTTCAAAACGCCAAAAGAGACTTGGGAATCAAGTAAACGGAAACGACAGCGTAATGGTTGCTTTGAGTGTGTTTGGACCAAATTGCCCCTCTTTTTCAATTGATGTCTCGTCAACGCCTCATTGGAGGGGGATTTCATCGTGTTGCTGTCTCTTCCGGCCTTCGTCTTCTTCTTCATCATCCATGGAGTTTCCTCCAGAAGGTTACAGAAGAAACGTTGGAATTTGTCTCTTTAATCCTTCTGGAAAAATTTTTGCAGCTTCGAGGCTGAACAGGCCTGAAGTCTGGGAAATGCCTCAGGGTGGTGTAAATGAAGGCGAAGATTTCACTACGGCAGCCAAGAGAGAACTCACTGAAGAAACTGGAGTAGTTTCTGCAGAAATTATTGCAGAGCTACCCTACTGGCTTACTTACGATTTCTCGCCCGAAACCAGCATCAAACTCAGCAAACACTGGGGAGTAAGATACAAAGGCCAAACCCAAAAGTGGTATTGTCACCTGAAAATCTGGCTTCTGTATCCTTTTGATGTTAAGGAACCTCCTTTTTAA

Protein sequence

MKPESILFSMPAFRLNSITFSVFVFVVVGDLPPPLASRTFQNNKKEAVLLAGNCAEVDLPGDGDSPPNLRREIQRDLVLGEVNRELVRRDADHLTQIRLKILEICRRRDDDGTDGDILLAVVENNRERNASSGLHHRRYKRKNLVKKEEEERRRKKKKRVLERNLEGGGYGGFYRVGFRFGALVLRKQNRRTWKEISKRQKRLGNQVNGNDSVMVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEETGVVSAEIIAELPYWLTYDFSPETSIKLSKHWGVRYKGQTQKWYCHLKIWLLYPFDVKEPPF

Homology

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BLAST of CmoCh14G003520 vs. ExPASy Swiss-Prot
Match: Q9CAF2 (Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT26 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.0e-37
Identity = 82/147 (55.78%), Postives = 97/147 (65.99%), Query Frame = 0


Query: 216 ALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSS---SSMEFPPEGYRRNVGICL 275
           +++ F  N PS  I  SS P        C   R SSSS+   SSME PPEGYRRNVG+CL
Sbjct: 16  SVTTFLRNYPSKPIKFSSLPFLHR----CRKSRVSSSSARCCSSMESPPEGYRRNVGVCL 75

Query: 276 FNPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEETGVVSAEIIAELPYWLT 335
            N S KIF ASRL+ P  W+MPQGG++EGED   A  REL EETGV SAEI+AE P+W+T
Sbjct: 76  MNSSKKIFTASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGVHSAEILAEAPHWIT 135

Query: 336 YDFSPETSIKLSKHWGVRYKGQTQKWY 360
           YDF P+   KL   WG  +KGQ QKW+
Sbjct: 136 YDFPPDVREKLKVRWGSDWKGQAQKWF 158

[Close]

BLAST of CmoCh14G003520 vs. ExPASy Swiss-Prot
Match: Q9FNH4 (Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT27 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.3e-33
Identity = 65/109 (59.63%), Postives = 80/109 (73.39%), Query Frame = 0


Query: 251 SSSSSSMEFPPEGYRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKR 310
           SS + ++E PP GYR+NVGICL +P  KIF AS+++ P+ W+MPQGG +EGED   AA R
Sbjct: 49  SSPARTVESPPVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQGGADEGEDLRNAAFR 108

Query: 311 ELTEETGVVSAEIIAELPYWLTYDFSPETSIKLSKHWGVRYKGQTQKWY 360
           EL EETGV SAE IAE+P WLTYDF  E   KL++ W   YKGQ QKW+
Sbjct: 109 ELREETGVTSAEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQKWF 157

[Close]

BLAST of CmoCh14G003520 vs. ExPASy Swiss-Prot
Match: Q9C6Z2 (Nudix hydrolase 25 OS=Arabidopsis thaliana OX=3702 GN=NUDT25 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.1e-31
Identity = 61/103 (59.22%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 257 MEFPPEGYRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEET 316
           ME  P GYR NVG+CL N    +F ASRLN P  W+MPQGG+ +GED  +AA REL EET
Sbjct: 1   MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60

Query: 317 GVVSAEIIAELPYWLTYDFSPETSIKLSKHWGVRYKGQTQKWY 360
           GVVSAEI++E+P WLTYDF P    K+++ WG  + GQ QKWY
Sbjct: 61  GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWY 103

[Close]

BLAST of CmoCh14G003520 vs. ExPASy Swiss-Prot
Match: Q2RV14 (RNA pyrophosphohydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=rppH PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.2e-19
Identity = 47/96 (48.96%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 264 YRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEETGVVSAEI 323
           YR+ VGI L N  G++F A RL+ PE W+MPQGG++ GED  TAA RE+ EE G  +A +
Sbjct: 14  YRQGVGIMLINARGQVFVARRLDSPEAWQMPQGGIDAGEDPETAAWREMEEEIGTRNALL 73

Query: 324 IAELPYWLTYDFSPETSIKLSKHWGVRYKGQTQKWY 360
           + E   WL YD   E   +L   WG R++GQ QKW+
Sbjct: 74  LGETAGWLGYDLPEELRGRL---WGGRFQGQRQKWF 106

[Close]

BLAST of CmoCh14G003520 vs. ExPASy Swiss-Prot
Match: Q5FU29 (RNA pyrophosphohydrolase OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rppH PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.8e-18
Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = 0


Query: 264 YRRNVGICLFNPSGKIFAASRLNRP-EVWEMPQGGVNEGEDFTTAAKRELTEETGVVSAE 323
           YR NVGI LFN  GK+F A R + P +VW+ PQGG++EGE    AA RE+ EE G  +A 
Sbjct: 9   YRPNVGIALFNRDGKLFIARRTDLPGDVWQCPQGGIDEGETPQVAALREMGEEIGTQNAR 68

Query: 324 IIAELPYWLTYDFSPETSIKLSKHWGVRYKGQTQKWY 360
           I+AE   WL+YD   +    + K  G R++GQTQKW+
Sbjct: 69  ILAERSGWLSYDLPSDL---IGKALGGRFRGQTQKWF 102

[Close]

BLAST of CmoCh14G003520 vs. ExPASy TrEMBL
Match: A0A6J1F566 (nudix hydrolase 26, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442265 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 2.2e-80
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 214 MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 273
           MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF
Sbjct: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60

Query: 274 NPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEETGVVSAEIIAELPYWLTY 333
           NPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEETGVVSAEIIAELPYWLTY
Sbjct: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEETGVVSAEIIAELPYWLTY 120

Query: 334 DFSPETSIKLSKHWGVRYKGQTQKWY 360
           DFSPETSIKLSKHWGVRYKGQTQKW+
Sbjct: 121 DFSPETSIKLSKHWGVRYKGQTQKWF 146

[Close]

BLAST of CmoCh14G003520 vs. ExPASy TrEMBL
Match: A0A6J1J4S6 (nudix hydrolase 26, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111481747 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 9.3e-79
Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 214 MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 273
           MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF
Sbjct: 1   MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLF 60

Query: 274 NPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEETGVVSAEIIAELPYWLTY 333
           NPSGKIFAASRLNRPEVWEMPQGGVNEGED  TAAKRELTEETGVVSAEII+ELPYWLTY
Sbjct: 61  NPSGKIFAASRLNRPEVWEMPQGGVNEGEDLNTAAKRELTEETGVVSAEIISELPYWLTY 120

Query: 334 DFSPETSIKLSKHWGVRYKGQTQKWY 360
           DFSPETSIKLSKHWGVRYKGQTQKW+
Sbjct: 121 DFSPETSIKLSKHWGVRYKGQTQKWF 146

[Close]

BLAST of CmoCh14G003520 vs. ExPASy TrEMBL
Match: A0A6J1DC58 (nudix hydrolase 26, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019369 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 7.1e-63
Identity = 119/147 (80.95%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 214 MVALSVFGPNCPSFSIDV-SSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICL 273
           MVAL VFGPN P +SI++ SSTPHWRG+    CLFR  +SSSSSMEFPPEGYRRNVGICL
Sbjct: 1   MVALGVFGPNYPYYSIEISSSTPHWRGLPLLSCLFR--ASSSSSMEFPPEGYRRNVGICL 60

Query: 274 FNPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEETGVVSAEIIAELPYWLT 333
           FN SGKIFAASRLNRPE+WEMPQGGVNEGED   AA+RELTEETGV+SAEI+AELPYWLT
Sbjct: 61  FNSSGKIFAASRLNRPEIWEMPQGGVNEGEDLKAAARRELTEETGVISAEIVAELPYWLT 120

Query: 334 YDFSPETSIKLSKHWGVRYKGQTQKWY 360
           YD SPE SIKLS+HWGVRYKGQ QKW+
Sbjct: 121 YDLSPEASIKLSQHWGVRYKGQAQKWF 145

[Close]

BLAST of CmoCh14G003520 vs. ExPASy TrEMBL
Match: A0A6J1DB53 (nudix hydrolase 26, chloroplastic-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111019369 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 7.1e-63
Identity = 119/147 (80.95%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 214 MVALSVFGPNCPSFSIDV-SSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICL 273
           MVAL VFGPN P +SI++ SSTPHWRG+    CLFR  +SSSSSMEFPPEGYRRNVGICL
Sbjct: 1   MVALGVFGPNYPYYSIEISSSTPHWRGLPLLSCLFR--ASSSSSMEFPPEGYRRNVGICL 60

Query: 274 FNPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEETGVVSAEIIAELPYWLT 333
           FN SGKIFAASRLNRPE+WEMPQGGVNEGED   AA+RELTEETGV+SAEI+AELPYWLT
Sbjct: 61  FNSSGKIFAASRLNRPEIWEMPQGGVNEGEDLKAAARRELTEETGVISAEIVAELPYWLT 120

Query: 334 YDFSPETSIKLSKHWGVRYKGQTQKWY 360
           YD SPE SIKLS+HWGVRYKGQ QKW+
Sbjct: 121 YDLSPEASIKLSQHWGVRYKGQAQKWF 145

[Close]

BLAST of CmoCh14G003520 vs. ExPASy TrEMBL
Match: A0A6J1DD27 (nudix hydrolase 26, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019369 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.7e-56
Identity = 112/147 (76.19%), Postives = 121/147 (82.31%), Query Frame = 0


Query: 214 MVALSVFGPNCPSFSIDV-SSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICL 273
           MVAL VFGPN P +SI++ SSTPHWRG+    CLFR  +SSSSSMEFPPEGYRRNVGICL
Sbjct: 1   MVALGVFGPNYPYYSIEISSSTPHWRGLPLLSCLFR--ASSSSSMEFPPEGYRRNVGICL 60

Query: 274 FNPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEETGVVSAEIIAELPYWLT 333
           FN SGKIFAASRLNRPE+WEMPQGGVNEGED   AA+RELTEETG         LPYWLT
Sbjct: 61  FNSSGKIFAASRLNRPEIWEMPQGGVNEGEDLKAAARRELTEETG---------LPYWLT 120

Query: 334 YDFSPETSIKLSKHWGVRYKGQTQKWY 360
           YD SPE SIKLS+HWGVRYKGQ QKW+
Sbjct: 121 YDLSPEASIKLSQHWGVRYKGQAQKWF 136

[Close]

BLAST of CmoCh14G003520 vs. TAIR 10
Match: AT3G10620.1 (nudix hydrolase homolog 26 )

HSP 1 Score: 156.8 bits (395), Expect = 3.5e-38
Identity = 82/147 (55.78%), Postives = 97/147 (65.99%), Query Frame = 0


Query: 216 ALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSS---SSMEFPPEGYRRNVGICL 275
           +++ F  N PS  I  SS P        C   R SSSS+   SSME PPEGYRRNVG+CL
Sbjct: 16  SVTTFLRNYPSKPIKFSSLPFLHR----CRKSRVSSSSARCCSSMESPPEGYRRNVGVCL 75

Query: 276 FNPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEETGVVSAEIIAELPYWLT 335
            N S KIF ASRL+ P  W+MPQGG++EGED   A  REL EETGV SAEI+AE P+W+T
Sbjct: 76  MNSSKKIFTASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGVHSAEILAEAPHWIT 135

Query: 336 YDFSPETSIKLSKHWGVRYKGQTQKWY 360
           YDF P+   KL   WG  +KGQ QKW+
Sbjct: 136 YDFPPDVREKLKVRWGSDWKGQAQKWF 158

[Close]

BLAST of CmoCh14G003520 vs. TAIR 10
Match: AT5G06340.1 (nudix hydrolase homolog 27 )

HSP 1 Score: 144.1 bits (362), Expect = 2.4e-34
Identity = 65/109 (59.63%), Postives = 80/109 (73.39%), Query Frame = 0


Query: 251 SSSSSSMEFPPEGYRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKR 310
           SS + ++E PP GYR+NVGICL +P  KIF AS+++ P+ W+MPQGG +EGED   AA R
Sbjct: 49  SSPARTVESPPVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQGGADEGEDLRNAAFR 108

Query: 311 ELTEETGVVSAEIIAELPYWLTYDFSPETSIKLSKHWGVRYKGQTQKWY 360
           EL EETGV SAE IAE+P WLTYDF  E   KL++ W   YKGQ QKW+
Sbjct: 109 ELREETGVTSAEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQKWF 157

[Close]

BLAST of CmoCh14G003520 vs. TAIR 10
Match: AT1G30110.1 (nudix hydrolase homolog 25 )

HSP 1 Score: 137.1 bits (344), Expect = 2.9e-32
Identity = 61/103 (59.22%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 257 MEFPPEGYRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEET 316
           ME  P GYR NVG+CL N    +F ASRLN P  W+MPQGG+ +GED  +AA REL EET
Sbjct: 1   MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60

Query: 317 GVVSAEIIAELPYWLTYDFSPETSIKLSKHWGVRYKGQTQKWY 360
           GVVSAEI++E+P WLTYDF P    K+++ WG  + GQ QKWY
Sbjct: 61  GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWY 103

[Close]

BLAST of CmoCh14G003520 vs. TAIR 10
Match: AT1G30110.2 (nudix hydrolase homolog 25 )

HSP 1 Score: 137.1 bits (344), Expect = 2.9e-32
Identity = 61/103 (59.22%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 257 MEFPPEGYRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDFTTAAKRELTEET 316
           ME  P GYR NVG+CL N    +F ASRLN P  W+MPQGG+ +GED  +AA REL EET
Sbjct: 1   MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60

Query: 317 GVVSAEIIAELPYWLTYDFSPETSIKLSKHWGVRYKGQTQKWY 360
           GVVSAEI++E+P WLTYDF P    K+++ WG  + GQ QKWY
Sbjct: 61  GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWY 103

[Close]

BLAST of CmoCh14G003520 vs. TAIR 10
Match: AT4G12720.1 (MutT/nudix family protein )

HSP 1 Score: 42.4 bits (98), Expect = 9.7e-04
Identity = 18/38 (47.37%), Postives = 27/38 (71.05%), Query Frame = 0


Query: 290 VWEMPQGGVNEGEDFTTAAKRELTEETGVVS--AEIIA 326
           VW++P G +NEGED  T   RE+ EETG+++   E++A
Sbjct: 133 VWKLPTGVINEGEDIWTGVAREVEEETGIIADFVEVLA 170

The following BLAST results are available for this feature:

BLAST of CmoCh14G003520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAF2	5.0e-37	55.78	Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT26 PE=1...	[more]
Q9FNH4	3.3e-33	59.63	Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT27 PE=1...	[more]
Q9C6Z2	4.1e-31	59.22	Nudix hydrolase 25 OS=Arabidopsis thaliana OX=3702 GN=NUDT25 PE=1 SV=1	[more]
Q2RV14	1.2e-19	48.96	RNA pyrophosphohydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1...	[more]
Q5FU29	1.8e-18	49.48	RNA pyrophosphohydrolase OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rpp...	[more]

BLAST of CmoCh14G003520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F566	2.2e-80	99.32	nudix hydrolase 26, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1J4S6	9.3e-79	97.26	nudix hydrolase 26, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1114817...	[more]
A0A6J1DC58	7.1e-63	80.95	nudix hydrolase 26, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673...	[more]
A0A6J1DB53	7.1e-63	80.95	nudix hydrolase 26, chloroplastic-like isoform X3 OS=Momordica charantia OX=3673...	[more]
A0A6J1DD27	1.7e-56	76.19	nudix hydrolase 26, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673...	[more]

BLAST of CmoCh14G003520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10620.1	3.5e-38	55.78	nudix hydrolase homolog 26	[more]
AT5G06340.1	2.4e-34	59.63	nudix hydrolase homolog 27	[more]
AT1G30110.1	2.9e-32	59.22	nudix hydrolase homolog 25	[more]
AT1G30110.2	2.9e-32	59.22	nudix hydrolase homolog 25	[more]
AT4G12720.1	9.7e-04	47.37	MutT/nudix family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 264..347 e-value: 1.1E-17 score: 64.2
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 263..377 score: 13.799354
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 253..365 e-value: 1.1E-30 score: 108.5
None	No IPR available	PANTHER	PTHR11839:SF22	NUDIX HYDROLASE 26, CHLOROPLASTIC	coord: 215..360
None	No IPR available	PANTHER	PTHR11839	UDP/ADP-SUGAR PYROPHOSPHATASE	coord: 215..360
IPR020084	NUDIX hydrolase, conserved site	PROSITE	PS00893	NUDIX_BOX	coord: 296..317
IPR022927	RNA pyrophosphohydrolase RppH	CDD	cd03671	Ap4A_hydrolase_plant_like	coord: 263..360 e-value: 6.47709E-41 score: 139.263
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	55811	Nudix	coord: 258..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G003520.1	CmoCh14G003520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006753	nucleoside phosphate metabolic process
biological_process	GO:0019693	ribose phosphate metabolic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0034432	bis(5'-adenosyl)-pentaphosphatase activity
molecular_function	GO:0008893	guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity
molecular_function	GO:0016787	hydrolase activity