CmoCh14G001260 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G001260
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RING-type E3 ubiquitin transferase
Location	Cmo_Chr14: 554519 .. 556682 (+)
RNA-Seq Expression	CmoCh14G001260
Synteny	CmoCh14G001260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTGATTACATCCACACTCGATCCTCCTCACAATCAAACTCAAGCAAGTTCAACCCAGTCTATTCTAAATTTTGACAGTAGACGAAATGCATATTCAAGCAACAATATCACCAAAACTATACAACAATGACAAATTATGTACCGATTGTTTGTTTTGGGAAGGCCGTACCATCTGGCATTGCTTAAACAATGTCTCGCTAGAGCTGGACGAGAACCCAGAATTTCCTGACATGCCATCAAAGACTTGATGAAGAAGGAGATGTCGAAAGCCTGAAACCTTAAATTGCCGTGGGGACGGTAGAGAATATTCGACATGTCGAATTGTTGAATGGGTTGGATTGGGCTGGGCTTTGGAAGCCCATTAAATAACTAAATCCTGTAAGCCCAAACAAGAAAAGCCTTTGAATAAACATAGCTGAAACTAAAAATATAAAAATTTAAATATGTATAATTTTGTGATAAATATGAGAAAGGGTCGATGTTTCAATTATGGAGTAAGAAAAAATATATATATAAATATTGATTTTAGAAAATCATTACAAAAAAAAAATAATAATAATAAATAATTTGAATAAACAGAATGGAAGATTATTAATGTAAATTGGTGTTGTTTTAGTTTATTTAAATTGAAGACAAATGCACATGGCGGCAACCAACAATAATTAATGCTAATTATTTAAAAACTAATGCAAAGAAATTTGTGTATAATAACGAAATTTGGCGCGTTAATTCCACGCTTTGATAAGCGACGTGCCTTCGCTGTCGAAGCTCCACGCAATTGTTTTTAACCTCAATTTTCGTCCGTTGCGAATCTCTCTGTCTCTCGATTTTACTACACCACTTAAAAGGCGAATTCTTTTCTGCAATTTTGGCATCCTTTCTTCCGTTCGAGGGAGATCATTTTTGGATTCTTGAAGTTTCTTGGCGTTCGTTGATTTCCGAGCATCGAATTCGGATAGGTAATTTCAATCACTTCATCGAACTTTATATAATTAGGGTATATTCTGTCAAGGAGTTATGGTGCCATTCTTTCGATCGATCAATTGATGGATTTGATGGGATCGACATCTTTTTGCTACAGATGCAATCGATTTATCAGAGCTCGGGCTCGGGCCCTACATTAGGTCTGTTGTCTTGATTGTGGAGGAGAAGAATTTAGGTCTCTGCCGTCTGTTTCTCCGGTTGATCATCGGTTTCCACCTGCTGCGATGAACCACGATGATGCTTCTGACCTAGACCCTTCCTTCGTCCCAAGATTGCGTCGCAGCCGAAGAAACGGTGAGGATCGCTCCTCTTTCAATCGTATCATTGTTCTACGCGATCCCTCTAATTCGGGCGCTATTAGTAATAATGGTGTTGGAGGTGGAGGAAATTATGAGATTTATTATGATGATGGTACGGGGGCTAGTCTCCGTTCCTTGCCTTCTAATATATCCGAGTTCTTGATGGGATCGGGGATCGATCGCCTTCTCAATCAATTGGCGCAACTGGAGGTGAACGGGGTTGGCCCATTGGAACACCCACCGGCGTCGAAGGCTGCAATTGAATCTTTGCCTGTGGTTAAGATTCTTGCTAGCGATGTGCCTTTGGAATCACATTGTGCGGTCTGTAAGGAACCATTTGAGCTCGACTCTGAGGCTCGACAGATGCCGTGTAAGCATATTTACCATTCGGATTGTATATTCCCTTGGCTTTCTATCCGGAATTCCTGTCCTGTTTGTCGCCACCAATTGCCTACCGATGCGCATGGCAGTGGCAGGAGCTCCCCGGCTTCTGCTGAAGAAGTTGTTGGATTAACAATTTGGAGGCTTCCCGGTGGGGGATTTGCTGTTGGAAGGTTCACTTGGGGAAGGGGAGCTGCAGAACATGACCTTCCTGTTGTTTACACTGAAATTGATGGTGGGTTTAGTACCACCAGCGGTGTTCCAAGGAGTATTACATGGGCGTCAAGTGGGATAAGATCAAATGAAAGTGGTGGATTTCGTCGTATTTTTCGCAATTTCTTCTCCTTTTTTGGGAGGTTTAGAAGTACATCCCGTCGTTCTGGTTCAGTTACTGGTTTAATTAGAAGGAGCTTCTCTACTACCTTATTCAATAGACGCTCAAGGAGGAATAATCACTCTATGGTGTCGGACGCAAACTATACATTTTCTGCTTAG

mRNA sequence

ATGGGATTGATTACATCCACACTCGATCCTCCTCACAATCAAACTCAAGCAAGTTCAACCCAGTCTATTCTAAATTTTGACAGCGAATTCTTTTCTGCAATTTTGGCATCCTTTCTTCCGTTCGAGGGAGATCATTTTTGGATTCTTGAAGTTTCTTGGCGTTCGTTGATTTCCGAGCATCGAATTCGGATAGATGCAATCGATTTATCAGAGCTCGGGCTCGGGCCCTACATTAGGTCTGTTGTCTTGATTGTGGAGGAGAAGAATTTAGACCCTTCCTTCGTCCCAAGATTGCGTCGCAGCCGAAGAAACGGTGAGGATCGCTCCTCTTTCAATCGTATCATTGTTCTACGCGATCCCTCTAATTCGGGCGCTATTAGTAATAATGGTGTTGGAGGTGGAGGAAATTATGAGATTTATTATGATGATGGTACGGGGGCTAGTCTCCGTTCCTTGCCTTCTAATATATCCGAGTTCTTGATGGGATCGGGGATCGATCGCCTTCTCAATCAATTGGCGCAACTGGAGGTGAACGGGGTTGGCCCATTGGAACACCCACCGGCGTCGAAGGCTGCAATTGAATCTTTGCCTGTGGTTAAGATTCTTGCTAGCGATGTGCCTTTGGAATCACATTGTGCGGTCTGTAAGGAACCATTTGAGCTCGACTCTGAGGCTCGACAGATGCCGTGTAAGCATATTTACCATTCGGATTGTATATTCCCTTGGCTTTCTATCCGGAATTCCTGTCCTGTTTGTCGCCACCAATTGCCTACCGATGCGCATGGCAGTGGCAGGAGCTCCCCGGCTTCTGCTGAAGAAGTTGTTGGATTAACAATTTGGAGGCTTCCCGGTGGGGGATTTGCTGTTGGAAGGTTCACTTGGGGAAGGGGAGCTGCAGAACATGACCTTCCTGTTGTTTACACTGAAATTGATGGTGGGTTTAGTACCACCAGCGGTGTTCCAAGGAGTATTACATGGGCGTCAAGTGGGATAAGATCAAATGAAAGTGGTGGATTTCGTCGTATTTTTCGCAATTTCTTCTCCTTTTTTGGGAGGTTTAGAAGTACATCCCGTCGTTCTGGTTCAGTTACTGGTTTAATTAGAAGGAGCTTCTCTACTACCTTATTCAATAGACGCTCAAGGAGGAATAATCACTCTATGGTGTCGGACGCAAACTATACATTTTCTGCTTAG

Coding sequence (CDS)

ATGGGATTGATTACATCCACACTCGATCCTCCTCACAATCAAACTCAAGCAAGTTCAACCCAGTCTATTCTAAATTTTGACAGCGAATTCTTTTCTGCAATTTTGGCATCCTTTCTTCCGTTCGAGGGAGATCATTTTTGGATTCTTGAAGTTTCTTGGCGTTCGTTGATTTCCGAGCATCGAATTCGGATAGATGCAATCGATTTATCAGAGCTCGGGCTCGGGCCCTACATTAGGTCTGTTGTCTTGATTGTGGAGGAGAAGAATTTAGACCCTTCCTTCGTCCCAAGATTGCGTCGCAGCCGAAGAAACGGTGAGGATCGCTCCTCTTTCAATCGTATCATTGTTCTACGCGATCCCTCTAATTCGGGCGCTATTAGTAATAATGGTGTTGGAGGTGGAGGAAATTATGAGATTTATTATGATGATGGTACGGGGGCTAGTCTCCGTTCCTTGCCTTCTAATATATCCGAGTTCTTGATGGGATCGGGGATCGATCGCCTTCTCAATCAATTGGCGCAACTGGAGGTGAACGGGGTTGGCCCATTGGAACACCCACCGGCGTCGAAGGCTGCAATTGAATCTTTGCCTGTGGTTAAGATTCTTGCTAGCGATGTGCCTTTGGAATCACATTGTGCGGTCTGTAAGGAACCATTTGAGCTCGACTCTGAGGCTCGACAGATGCCGTGTAAGCATATTTACCATTCGGATTGTATATTCCCTTGGCTTTCTATCCGGAATTCCTGTCCTGTTTGTCGCCACCAATTGCCTACCGATGCGCATGGCAGTGGCAGGAGCTCCCCGGCTTCTGCTGAAGAAGTTGTTGGATTAACAATTTGGAGGCTTCCCGGTGGGGGATTTGCTGTTGGAAGGTTCACTTGGGGAAGGGGAGCTGCAGAACATGACCTTCCTGTTGTTTACACTGAAATTGATGGTGGGTTTAGTACCACCAGCGGTGTTCCAAGGAGTATTACATGGGCGTCAAGTGGGATAAGATCAAATGAAAGTGGTGGATTTCGTCGTATTTTTCGCAATTTCTTCTCCTTTTTTGGGAGGTTTAGAAGTACATCCCGTCGTTCTGGTTCAGTTACTGGTTTAATTAGAAGGAGCTTCTCTACTACCTTATTCAATAGACGCTCAAGGAGGAATAATCACTCTATGGTGTCGGACGCAAACTATACATTTTCTGCTTAG

Protein sequence

MGLITSTLDPPHNQTQASSTQSILNFDSEFFSAILASFLPFEGDHFWILEVSWRSLISEHRIRIDAIDLSELGLGPYIRSVVLIVEEKNLDPSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYYDDGTGASLRSLPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKILASDVPLESHCAVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDAHGSGRSSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGVPRSITWASSGIRSNESGGFRRIFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNRRSRRNNHSMVSDANYTFSA

Homology

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BLAST of CmoCh14G001260 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.0e-61
Identity = 143/295 (48.47%), Postives = 173/295 (58.64%), Query Frame = 0


Query: 102 RRNGEDRSSFNRIIVLRDPSNSGAIS--NNGVGGGGN-----YEIYYDDGTGASLRSLPS 161
           RR    R+SFN +IVL      GA     N  G G       YE YYDDG+G+ LR LP 
Sbjct: 96  RRRSNRRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERRAYEFYYDDGSGSGLRPLPD 155

Query: 162 NISEFLMGSGIDRLLNQLAQLEV--NGVGPLEHPPASKAAIESLPVVKILASDVPLESHC 221
           ++SE LMGSG +RLL QL+Q+E   NG+G   +PPASK+AIESLP V+I       E++C
Sbjct: 156 SVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANC 215

Query: 222 AVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDAHGSGRSSPASAE 281
           AVC E FE   E R+MPCKHI+H DCI PWLSIRNSCPVCR +LP+D     RS+    E
Sbjct: 216 AVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDP--IQRSN--EEE 275

Query: 282 EVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGVPRSITW------ 341
             VG+TIWRLPGGGFAVGRF  G    E  LPVV TE+DGG   ++  PR I+W      
Sbjct: 276 HAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGSNEGPRRISWVRAHET 335

Query: 342 ---ASSGIRSNESGGFRRIFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNR 379
              + +G RS   G  RR  R   SF  R R +   S S    +     T + NR
Sbjct: 336 PEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNSNVIDLDSDGETRVMNR 386

[Close]

BLAST of CmoCh14G001260 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.4e-60
Identity = 152/328 (46.34%), Postives = 196/328 (59.76%), Query Frame = 0


Query: 92  PSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGG---GNYEIYYDDGTGAS 151
           P+ V R R +R       S N +IVLR   ++ A S++ V  G     +++YYDDGT + 
Sbjct: 82  PTIVTRTRSNR-------SPNPVIVLR--GSAAAPSSDVVSEGLDRSAFQMYYDDGTDSG 141

Query: 152 LRSLPSNISEFLMGSGIDRLLNQLAQLEVN---GVGPLEHPPASKAAIESLPVVKI---- 211
           LR LP +++EFL+GSG DRLL+Q++Q+E+N    +   EHPPASK+AIE+LP+++I    
Sbjct: 142 LRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALPLIEIDPTH 201

Query: 212 LASDVPLESHCAVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLP---- 271
           L SD   +SHCAVCKE F L S AR+MPC HIYH DCI PWL+IRNSCPVCRH+LP    
Sbjct: 202 LLSD--SQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAEDL 261

Query: 272 TDAHGSGRSS-PASAEE----VVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDG 331
           TD  G+  ++  A+AEE      GLTIWRLPGGGFAVGR   G    +  +PVVYTE+DG
Sbjct: 262 TDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWRGGDRMMPVVYTEVDG 321

Query: 332 GFSTTSGVPRSITWAS-------SGIRSNESGGFRRIFRNFFSFFGRFRS------TSRR 385
           G      +PR + W S        G R    G   RI R F  F G   S       S  
Sbjct: 322 GRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGCFSGSSGSIAAAAAASSG 381

[Close]

BLAST of CmoCh14G001260 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.7e-59
Identity = 132/279 (47.31%), Postives = 168/279 (60.22%), Query Frame = 0


Query: 100 RSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGN--YEIYYDDGTGASLRSLPSNIS 159
           R RR+G  R SFN +IVL+  +        G        +E YYDDG+G+ LR LP ++S
Sbjct: 84  RRRRSGR-RPSFNPVIVLQGGAGEREEGEEGDAARDRRAFEFYYDDGSGSGLRPLPDSVS 143

Query: 160 EFLMGSGIDRLLNQLAQLEVN--GVGPLEHPPASKAAIESLPVVKILASDVPLESHCAVC 219
           E LMGSG +RLL QL+Q+E +  G+G   +PPASK+AIESLP V+I    +  E++CAVC
Sbjct: 144 EILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVC 203

Query: 220 KEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDAHGSGRSSPASAEEVV 279
            E FE ++EAR+MPCKH++H DCI PWLSIRNSCPVCR +LP++   + RS+    +  V
Sbjct: 204 TEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEP--NRRSNNNEEDNAV 263

Query: 280 GLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEID-GGFSTTSGVPRSITWASS----- 339
           G+TIWRLPGGGFAVGRF       E  LPVV TE+D GG   +   PR I+W  S     
Sbjct: 264 GMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRISWVRSHGTLE 323

Query: 340 ------GIRSNESGGFRRIFRNFFSFFGRFRSTSRRSGS 363
                 G  S   G  RR+ R   S   R R     S S
Sbjct: 324 SDSNGTGSGSGSGGRLRRMVRGMVSLMRRVRPNRSSSSS 359

[Close]

BLAST of CmoCh14G001260 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.1e-29
Identity = 59/109 (54.13%), Postives = 82/109 (75.23%), Query Frame = 0


Query: 152 LPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKILASDVPLE-S 211
           LP+NI ++ +G G+++L+ QLA+ + N  G    PPASK+AIE+LP+V I  S++  E +
Sbjct: 166 LPANIGDYFIGPGLEQLIQQLAENDPNRYGT---PPASKSAIEALPLVNITKSNLNSEFN 225

Query: 212 HCAVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTD 260
            CAVC + FE  +EA+QMPCKH+YH DC+ PWL + NSCPVCRH+LPTD
Sbjct: 226 QCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTD 271

[Close]

BLAST of CmoCh14G001260 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.4e-26
Identity = 62/169 (36.69%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 92  PSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYYDDGTGASLRS 151
           PS  P+ R +++N +   +F+    L++   +   S      G ++E   ++        
Sbjct: 105 PSMQPQARSTQQNPQS-DAFDPFTFLQNHLQTLRSS------GTHFEFVIENHPSDPGNR 164

Query: 152 LPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKILASDVPLE-S 211
           +P N  ++  G G+++L+ QLA+ + N  G    PPASK+AI++LP VK+    +  E +
Sbjct: 165 MPGNFGDYFFGPGLEQLIQQLAENDPNRYGT---PPASKSAIDALPTVKVTKDMLKSEMN 224

Query: 212 HCAVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTD 260
            CAVC + FE  S+ +QMPCKH++H DC+ PWL + NSCPVCR +LPTD
Sbjct: 225 QCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTD 263

[Close]

BLAST of CmoCh14G001260 vs. ExPASy TrEMBL
Match: A0A6J1F5C6 (E3 ubiquitin-protein ligase RDUF1-like OS=Cucurbita moschata OX=3662 GN=LOC111442455 PE=4 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.8e-174
Identity = 308/312 (98.72%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 86  EEKNLDPSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYYDDGT 145
           +  +LDPSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYYDDGT
Sbjct: 5   DASDLDPSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYYDDGT 64

Query: 146 GASLRSLPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKILASD 205
           GASLRSLPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKILASD
Sbjct: 65  GASLRSLPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKILASD 124

Query: 206 VPLESHCAVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDAHGSGR 265
           VPLESHCAVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDAHGSGR
Sbjct: 125 VPLESHCAVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDAHGSGR 184

Query: 266 SSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGVPRSIT 325
           SSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGVPRSIT
Sbjct: 185 SSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGVPRSIT 244

Query: 326 WASSGIRSNESGGFRRIFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNRRSRRNNH 385
           WASSGIRSNESGGFRRIFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNRRSRRNNH
Sbjct: 245 WASSGIRSNESGGFRRIFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNRRSRRNNH 304

Query: 386 SMVSDANYTFSA 398
           SMVSDANYTFSA
Sbjct: 305 SMVSDANYTFSA 316

[Close]

BLAST of CmoCh14G001260 vs. ExPASy TrEMBL
Match: A0A6J1J964 (E3 ubiquitin-protein ligase RDUF1-like OS=Cucurbita maxima OX=3661 GN=LOC111482444 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 4.1e-170
Identity = 302/312 (96.79%), Postives = 305/312 (97.76%), Query Frame = 0


Query: 86  EEKNLDPSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYYDDGT 145
           +  +LDPSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYYDDGT
Sbjct: 5   DASDLDPSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYYDDGT 64

Query: 146 GASLRSLPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKILASD 205
           GASLRSLPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKILAS 
Sbjct: 65  GASLRSLPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKILASH 124

Query: 206 VPLESHCAVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDAHGSGR 265
           VPLESHCAVCKEPFELDSEARQMPCKHIYHSDCI PWLSIRNSCPVCRHQLPTD HGSGR
Sbjct: 125 VPLESHCAVCKEPFELDSEARQMPCKHIYHSDCICPWLSIRNSCPVCRHQLPTDVHGSGR 184

Query: 266 SSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGVPRSIT 325
           SSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTT GVPRSIT
Sbjct: 185 SSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTIGVPRSIT 244

Query: 326 WASSGIRSNESGGFRRIFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNRRSRRNNH 385
           WASSGIRS+ESGGFR IFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNRRSRRNNH
Sbjct: 245 WASSGIRSSESGGFRSIFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNRRSRRNNH 304

Query: 386 SMVSDANYTFSA 398
           SMVSDANYTFSA
Sbjct: 305 SMVSDANYTFSA 316

[Close]

BLAST of CmoCh14G001260 vs. ExPASy TrEMBL
Match: A0A6J1CXJ7 (probable E3 ubiquitin-protein ligase RHC2A OS=Momordica charantia OX=3673 GN=LOC111015120 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 2.3e-152
Identity = 267/299 (89.30%), Postives = 281/299 (93.98%), Query Frame = 0


Query: 91  DPSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYYDDGTGASLR 150
           DPSFVPRLRRSRRNGEDR+ FNRIIVLRDPSN+GAISNNG+G GGNYEIYYDDGTG++LR
Sbjct: 10  DPSFVPRLRRSRRNGEDRAPFNRIIVLRDPSNAGAISNNGIGAGGNYEIYYDDGTGSTLR 69

Query: 151 SLPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKILASDVPLES 210
            LPSNISEFLMGSG DRLLNQLAQLEVNGVG LEHPPASKAAIESLPVVKILAS VP+ES
Sbjct: 70  PLPSNISEFLMGSGFDRLLNQLAQLEVNGVGSLEHPPASKAAIESLPVVKILASHVPVES 129

Query: 211 HCAVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDAHGSGRSSPAS 270
           HCAVCKEPFELDSEAR+MPCKHIYHSDCI PWLSIRNSCPVCRHQLPTD HGSGRSSPAS
Sbjct: 130 HCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTDGHGSGRSSPAS 189

Query: 271 AEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGVPRSITWASSG 330
           AEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSG+PR I+WASSG
Sbjct: 190 AEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIPRRISWASSG 249

Query: 331 IRSNESGGFRRIFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNRRSRRNNHSMVS 390
            RS+E GGFRR+FRNFFSFFGRFRS+S  S S TGL+RRSFS+TLFNRRSRRNNH   S
Sbjct: 250 RRSSEGGGFRRVFRNFFSFFGRFRSSSHHSSSGTGLMRRSFSSTLFNRRSRRNNHLTAS 308

[Close]

BLAST of CmoCh14G001260 vs. ExPASy TrEMBL
Match: A0A0A0LFJ3 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G734090 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 4.4e-148
Identity = 262/307 (85.34%), Postives = 278/307 (90.55%), Query Frame = 0


Query: 91  DPSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYYDDGTGASLR 150
           +PSFVPRLRRS RNGEDRSSFNRIIVLRDPSNSG +SNNG+GGGGNYEI+ DDGTGASLR
Sbjct: 10  NPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFCDDGTGASLR 69

Query: 151 SLPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKILASDVPLES 210
            LPSN+SEFLMGSG DRLLNQLAQLEVNGV PLE+PPASKAAIESLPVVKILA+ V +ES
Sbjct: 70  PLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKILANHVRVES 129

Query: 211 HCAVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDAHGSGRSSPAS 270
           HCAVCKEPFELDSEAR+MPCKHIYH DCI PWLSIRNSCPVCRHQLPTD H SGR+SPAS
Sbjct: 130 HCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVHSSGRNSPAS 189

Query: 271 AEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGVPRSITWASSG 330
           AEEVVGLTIWRLPG GFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSG+PR ITW SSG
Sbjct: 190 AEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIPRRITWESSG 249

Query: 331 IRSNESGGFRRIFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNRRSRRNNHSMVSD 390
            RS+ESGGFR +FRN FSFFGRFRS+SR SGS  G +RRSFS  LFNR SRRNN  + SD
Sbjct: 250 RRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSRRNNQPIASD 309

Query: 391 ANYTFSA 398
            NYTFSA
Sbjct: 310 INYTFSA 316

[Close]

BLAST of CmoCh14G001260 vs. ExPASy TrEMBL
Match: A0A1S3B6J2 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103486374 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 5.4e-146
Identity = 260/307 (84.69%), Postives = 274/307 (89.25%), Query Frame = 0


Query: 91  DPSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYYDDGTGASLR 150
           +PSFVPRLRRS RNGEDRS FNR IVLRDPSNSG +SNNG+G GGNYEI+ DDGTGASLR
Sbjct: 10  NPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFCDDGTGASLR 69

Query: 151 SLPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKILASDVPLES 210
            LPSNISEFLMGSG DRLLNQLA+LEVN V PLE+PPASKAAIESLPVVKILAS VP+ES
Sbjct: 70  PLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKILASHVPMES 129

Query: 211 HCAVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDAHGSGRSSPAS 270
           HCAVCKEPFELDSEAR+MPCKHIYH DCI PWLSIRNSCPVCRHQLPTD H SGR+SPAS
Sbjct: 130 HCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVHSSGRNSPAS 189

Query: 271 AEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGVPRSITWASSG 330
           AEEVVGLTIWRLPG GFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSG+PR ITW SSG
Sbjct: 190 AEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIPRRITWESSG 249

Query: 331 IRSNESGGFRRIFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNRRSRRNNHSMVSD 390
            RS ESGGFRR+FRN FSF GRFRS+SR SGS  G +RRSFS  LFNRRSRRNN  + SD
Sbjct: 250 RRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSRRNNQPIASD 309

Query: 391 ANYTFSA 398
            NY FSA
Sbjct: 310 INYMFSA 316

[Close]

BLAST of CmoCh14G001260 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 238.8 bits (608), Expect = 7.4e-63
Identity = 143/295 (48.47%), Postives = 173/295 (58.64%), Query Frame = 0


Query: 102 RRNGEDRSSFNRIIVLRDPSNSGAIS--NNGVGGGGN-----YEIYYDDGTGASLRSLPS 161
           RR    R+SFN +IVL      GA     N  G G       YE YYDDG+G+ LR LP 
Sbjct: 96  RRRSNRRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERRAYEFYYDDGSGSGLRPLPD 155

Query: 162 NISEFLMGSGIDRLLNQLAQLEV--NGVGPLEHPPASKAAIESLPVVKILASDVPLESHC 221
           ++SE LMGSG +RLL QL+Q+E   NG+G   +PPASK+AIESLP V+I       E++C
Sbjct: 156 SVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANC 215

Query: 222 AVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDAHGSGRSSPASAE 281
           AVC E FE   E R+MPCKHI+H DCI PWLSIRNSCPVCR +LP+D     RS+    E
Sbjct: 216 AVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDP--IQRSN--EEE 275

Query: 282 EVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGVPRSITW------ 341
             VG+TIWRLPGGGFAVGRF  G    E  LPVV TE+DGG   ++  PR I+W      
Sbjct: 276 HAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGSNEGPRRISWVRAHET 335

Query: 342 ---ASSGIRSNESGGFRRIFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNR 379
              + +G RS   G  RR  R   SF  R R +   S S    +     T + NR
Sbjct: 336 PEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNSNVIDLDSDGETRVMNR 386

[Close]

BLAST of CmoCh14G001260 vs. TAIR 10
Match: AT2G39720.1 (RING-H2 finger C2A )

HSP 1 Score: 233.4 bits (594), Expect = 3.1e-61
Identity = 152/328 (46.34%), Postives = 196/328 (59.76%), Query Frame = 0


Query: 92  PSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGG---GNYEIYYDDGTGAS 151
           P+ V R R +R       S N +IVLR   ++ A S++ V  G     +++YYDDGT + 
Sbjct: 82  PTIVTRTRSNR-------SPNPVIVLR--GSAAAPSSDVVSEGLDRSAFQMYYDDGTDSG 141

Query: 152 LRSLPSNISEFLMGSGIDRLLNQLAQLEVN---GVGPLEHPPASKAAIESLPVVKI---- 211
           LR LP +++EFL+GSG DRLL+Q++Q+E+N    +   EHPPASK+AIE+LP+++I    
Sbjct: 142 LRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALPLIEIDPTH 201

Query: 212 LASDVPLESHCAVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLP---- 271
           L SD   +SHCAVCKE F L S AR+MPC HIYH DCI PWL+IRNSCPVCRH+LP    
Sbjct: 202 LLSD--SQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAEDL 261

Query: 272 TDAHGSGRSS-PASAEE----VVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDG 331
           TD  G+  ++  A+AEE      GLTIWRLPGGGFAVGR   G    +  +PVVYTE+DG
Sbjct: 262 TDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWRGGDRMMPVVYTEVDG 321

Query: 332 GFSTTSGVPRSITWAS-------SGIRSNESGGFRRIFRNFFSFFGRFRS------TSRR 385
           G      +PR + W S        G R    G   RI R F  F G   S       S  
Sbjct: 322 GRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGCFSGSSGSIAAAAAASSG 381

[Close]

BLAST of CmoCh14G001260 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 230.3 bits (586), Expect = 2.6e-60
Identity = 132/279 (47.31%), Postives = 168/279 (60.22%), Query Frame = 0


Query: 100 RSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGN--YEIYYDDGTGASLRSLPSNIS 159
           R RR+G  R SFN +IVL+  +        G        +E YYDDG+G+ LR LP ++S
Sbjct: 84  RRRRSGR-RPSFNPVIVLQGGAGEREEGEEGDAARDRRAFEFYYDDGSGSGLRPLPDSVS 143

Query: 160 EFLMGSGIDRLLNQLAQLEVN--GVGPLEHPPASKAAIESLPVVKILASDVPLESHCAVC 219
           E LMGSG +RLL QL+Q+E +  G+G   +PPASK+AIESLP V+I    +  E++CAVC
Sbjct: 144 EILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVC 203

Query: 220 KEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDAHGSGRSSPASAEEVV 279
            E FE ++EAR+MPCKH++H DCI PWLSIRNSCPVCR +LP++   + RS+    +  V
Sbjct: 204 TEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEP--NRRSNNNEEDNAV 263

Query: 280 GLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEID-GGFSTTSGVPRSITWASS----- 339
           G+TIWRLPGGGFAVGRF       E  LPVV TE+D GG   +   PR I+W  S     
Sbjct: 264 GMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRISWVRSHGTLE 323

Query: 340 ------GIRSNESGGFRRIFRNFFSFFGRFRSTSRRSGS 363
                 G  S   G  RR+ R   S   R R     S S
Sbjct: 324 SDSNGTGSGSGSGGRLRRMVRGMVSLMRRVRPNRSSSSS 359

[Close]

BLAST of CmoCh14G001260 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-27
Identity = 62/169 (36.69%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 92  PSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYYDDGTGASLRS 151
           PS  P+ R +++N +   +F+    L++   +   S      G ++E   ++        
Sbjct: 105 PSMQPQARSTQQNPQS-DAFDPFTFLQNHLQTLRSS------GTHFEFVIENHPSDPGNR 164

Query: 152 LPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKILASDVPLE-S 211
           +P N  ++  G G+++L+ QLA+ + N  G    PPASK+AI++LP VK+    +  E +
Sbjct: 165 MPGNFGDYFFGPGLEQLIQQLAENDPNRYGT---PPASKSAIDALPTVKVTKDMLKSEMN 224

Query: 212 HCAVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTD 260
            CAVC + FE  S+ +QMPCKH++H DC+ PWL + NSCPVCR +LPTD
Sbjct: 225 QCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTD 263

[Close]

BLAST of CmoCh14G001260 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 2.8e-25
Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 154 SNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKILASDV-PLESHC 213
           +N  ++  G G++ L+ QL+    +G      PPA K++I++LP +KI    +   +SHC
Sbjct: 131 TNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHC 190

Query: 214 AVCKEPFELDSEARQMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDAHGSGRSSPAS 271
            VCK+ FEL SEA+QMPC HIYHSDCI PWL   NSCPVCR +LP  + GS  S+ +S
Sbjct: 191 PVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP--SRGSSSSTQSS 242

The following BLAST results are available for this feature:

BLAST of CmoCh14G001260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SNB6	1.0e-61	48.47	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
O22283	4.4e-60	46.34	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q940T5	3.7e-59	47.31	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
P0CH30	1.1e-29	54.13	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	2.4e-26	36.69	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]

BLAST of CmoCh14G001260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5C6	2.8e-174	98.72	E3 ubiquitin-protein ligase RDUF1-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1J964	4.1e-170	96.79	E3 ubiquitin-protein ligase RDUF1-like OS=Cucurbita maxima OX=3661 GN=LOC1114824...	[more]
A0A6J1CXJ7	2.3e-152	89.30	probable E3 ubiquitin-protein ligase RHC2A OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A0A0LFJ3	4.4e-148	85.34	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G734090 P...	[more]
A0A1S3B6J2	5.4e-146	84.69	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103486374 P...	[more]

BLAST of CmoCh14G001260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46620.1	7.4e-63	48.47	zinc finger (C3HC4-type RING finger) family protein	[more]
AT2G39720.1	3.1e-61	46.34	RING-H2 finger C2A	[more]
AT5G59550.1	2.6e-60	47.31	zinc finger (C3HC4-type RING finger) family protein	[more]
AT3G19950.1	1.7e-27	36.69	RING/U-box superfamily protein	[more]
AT3G56580.2	2.8e-25	47.46	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 212..252 e-value: 1.9E-7 score: 40.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 211..253 e-value: 3.2E-10 score: 40.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 212..253 score: 12.164712
IPR010543	Domain of unknown function DUF1117	PFAM	PF06547	DUF1117	coord: 275..363 e-value: 7.7E-35 score: 119.9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 180..259 e-value: 6.8E-20 score: 72.5
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 93..341
None	No IPR available	PANTHER	PTHR15710:SF61	E3 UBIQUITIN-PROTEIN LIGASE RHC2A-RELATED	coord: 93..341
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 212..253 e-value: 4.55758E-24 score: 91.6104
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 192..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G001260.1	CmoCh14G001260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity