CmoCh14G001220 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G001220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein, putative isoform 1
Location	Cmo_Chr14: 542304 .. 551355 (-)
RNA-Seq Expression	CmoCh14G001220
Synteny	CmoCh14G001220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTCTCTCTCTCTGGCCATTTCTCTGATAGCTATGATTCGCGTCGCCGTTCAGCTGTCAAAAACCACTGCGGCGGTCGTTCGAACTGCAGGACTGGGCTCCAGCTCCCGCTTCGATCTTCTCTCCTCTCCATCTTCCTCATGGTTAGCTTCACCGTTGAGATCACTTTACGTTGGAATAGACCGTCCGAATGCGAGCCCGGTCTCTTGTCAGATGATTAATTATGCTCTGTCTCACGCTAGGTCTCAGAAATCAGGTCCATATTCTTATTTGTTTTTATGTCAAAAATCGGTGTGAAGTTTTTGGTCTGTAATCTTTTTAATGTGATAATTAGACGAATCGTACGCACAAGGTCGTCTGGTTCTGGAGCAGTGCCTCTCTGCTCAGTCGAGTGAAGGCCAAGATGCCGATAACTCTAGGGGAGCGGTATTACTTGCCATGTCTACCTTGTTTGCTGAAAGGTTTTCCTTCTGTTTCATTTGTCCTGTCGTTTTTTGATTCATTTCTTTAAGAGCTACATTGTAGTTTAATGGAATTGCTTATGGCTTAACAATTGTCCTATTTTGTTATTTCAGAGGTGATATTCACGACGCTATAGATAAGCTTCAACGAGTTGAGGATTTAGCACATTGCTCTCTAGATATTAGAGGTAAAGTTTCCAAGGGTTTTTAGTTCATTCTTTTAGCGTAGGTAGCTCGGTTCAAATCGATTATTGGGAGCTCGTGTTTTGACTCTAGTTTTTTCTTGTTTTTCTTGTAGTTGCTGCTCTTGAAGCACTTGCTGGACTTCATCTCGAACTAAACCTGGTAAATATCCTTGTAAACTTGTAATTATTGCTCATCTCTAATCGTGTAACATGGATCAAAGTTATCTGGGGATGATTCTTCATATATAGGATGATTCTTCATCAGATATCGCAGATAAATGCTTAAAACTATTTGAAAATAGCAAGGTTGCTGATGATGGAAATTCTGGCGTTCTGAGAGCTCGTGTTAAAGCTGTAAAGGGGCTGGTTGAGCTTGTAAAAAATAACCTTGATGCAGGTGTTTGGCTTTTAGTACTCTCTCTACGCACTTTGTTCTTTTGTGATGTTTTACTCAAGTTAATGTTGGTTATCTATCTGCAGCTGAATCGTTATTTGAAGGGTTTCAAACTATTGAAAGATGTGCTGGTGAGGTTCACTTGAACGATCTGTGTGGGAAAAGTTGTTGATTACATCCTATTGACCATTTGATATGTAGGTAGTGCTGCATTTGCATATGGAGAATTCTTAGTTGCCTCACAGAATTTTTCATCAGCAAAAGAGGTGTATCAAAGAGTAATTGAAGTGGGATCCGAAGTCCAAGATTTGAGTGAGCAATGTGCTTTAGCTGGTGGTAAGATGTCTCCAATGGAAGTGTTAGTGGCTGCGACTTGTGCTTTAGGGCAGCTTGAGGGGCACTTGGGGTAGCTTTTTGATCATTGTGCTATGTTGTGCTATTTGTCCATAAGATTCTTTATTGCAATAGTTATGAATCATAACTATACCCTGTTTTGTTTAGGAATTTTTCTGAAGCCGAGGATATACTGACAAACGCGTTGACCAAAGCAGAAGCATATTTTGGTATGGTAGTTGCTAGTTTAGAATTCCCAATATACTTGAATCTTTACGACATGTATACAACTGAGGTTCCTGTTTGTTCTCATGTGGAATTGTTTGGCTATTTTCCAAGTGGGTGGGCGTCTAATTTTTGGAAAATTACATGGTACAGGATCTCACCATCCCAAGGTTGGAGTTGTCTTAACCTGCATAGCACTCATGTATCGATACAAAGCAAAGAAGGAGCATTCGAGTTCACTTTTGATTCAGGAGGTTGGATTTTGCTCCTGCCCTCTTATGTTTGGCATATGTAGATTCTATGTAGTTAATGAAACTTGTTGCATCAGTTACGGAGGTTGGTAATTCAGTCTACTTAACTTTGGGAAGTTTTTTTCATTAATAAAAGTGAAATTTTACAGATGACTATAAATTGGGGACATTGAGCGTAAAGACTTAAGTCCATTTTCGAAACGCCCTTTGAAGAGTGATATCAAAAGAAAAGGGGAATTGTGTTGGGAGATTCCTGATTAGAAAAGTGATTAGAAAACGGATATCGATTTGAGAGGATGTAGCTCACGTCTGAATCATTTGTATCGTGTAAATCTACTCATAAGTTAATTTGTGAGAACTGTCATGCTCTTTTCCACTGCTTACTTATGTTTTAAACTCCCTTCAAATATAAGCAAAAATTACATTCCTTAGTGCATTGAGGAAGGTGTTGATTTCTCATCCAAACAACCTGGTGTTGGTTCTTGTATACTGGCCCATGATTGAATCTTTTGCCAAGATAGAAAAGTTATACAACTAATTCCGGTCGTTATCAAGTTGTCTGTACAATTCAATTCCAGTTAACATTTAGGCTTCTTGTCTGAATGTTGGGAAATCAAATATGAAATCCTCATAGTTTATAAAAGTATTTCTTGTTAGTTTCCTTTCTGCAGATTTCTCTAAAAATTCATTTACAGGGACTCTATAGGAGAGCAATGGACTTGATGAAAGTTTCACCAGAAGGTATTGCCAACCAACTCAACATCTCAAGCTTTTTTTTATTTTTATTTTTTATTTTTATGTATGTATATATATATATTAATTTCAATTGAATGGTTTATCCTCTTGAAGGCACGGGAGAACAAGTAAAGGTGGACAGATGTGACATTGCAAATATCGCCGGAGGTACTGATCAAGTATAATCTAAGTGATTCTAAGCATTTAGCTCGATGCTTTAAAAAAAACAAACAAATCACTGCATCAGGTAGAAACGTTCGTTAGGAGAGTTGTAGTACTTAGAAAATTGATAGCTTTCAGCTGTACTCTTAAATGAAACCGAGCTAAACTGATCGTTATCCCACCATTGATTATAATTGAAATCATTCATAAAGTCACATATTATAGTAAGAAAGACGTTTTAAGCTTCATAAACGTGGTGGTCTGAGCATGATTATTCTTTGATATCACTGATTGCCTCTGCAGGTGCGTACGCGGAGATACTTGACGTCCAAAAGAATAGAAAGGCTGAAGGACAGATGATGAGGAAATGGTCGGAACTTGCTTGGAAGAATCGTAGGATATCACTGGAAGAGGTACTAGACATAGCTCAGCCGCCTTCCAAGGTGCCTATTATCGATACTCGACTCTGTAGGCTTATTTAATTTGCAATATTTTCGAGTTCTGGTTGTTATGCATCTTTATAGAAGACAAGAGGGTGAGCACATTCTCTAGGCTGACAATGTTGTGTAATTTACTCATGAAGTACAAGAACTTGAAGAATGTAGAATTCTCTGATACAGTTGAGAGGTCTATATTACAGTTACAATTTTGATTTAAAAAAAAAAAACACGAAGGATCTCAAGATGATAATAAGCCTTCTGGAAATCAAAGAGGAAGATCCAGTCCTTTCCCAATATCAACTCCAATCACCTGAAGTATACCCTTGTTCAATATCTGGAAAAACAGAAAATAAATCAATAAATAAAACCCCTAAACTTGGATATAGAAGGTAAAAGAAAGAAACTTTTCTTTGAAAAGAAAAAAGAAAGAAAAGCTCACCAGCTCTACTACGAATATCCCAATGAGGCCTATCATGCTGGCTCTGGAATTCCAGATTTCAGCAGTTTTAGTGAATCCAAGAAACGGGGCTTCAAATTTCGGCTGTACTTTTGGCAATTCAACCTTCAAAACAGAAATGAAAAGGTAACTCGCAAGCTCACATGAATTTATTATTCTGAATTTCTCTAAGCTTTTCAGATGTAAACGATATTTTCAACAGGTGAAACAGAATTGGGAAAAGTCCAGTGGTTTGAAGAGGATAGTCAGCTTACTCCAGCCGGAGGCTTTGCGGCCTGAACCCTAAAAGGGGCACGAGCCCTTCTGTTATTGGCACGGACAGACCCAACTTGGAAGAGACAGAGTCGGCCGTCTTGACGGTCACAGATCGGAGCTCTGGCCGGAAGAAGAGAAGACGATAAAATCGTAGCGGAGGACGCCATTACTTGGTAATGCCCCAAACACAACGACAACCACAACCACAACCACGGCTTCGGTAATGTTATCACAACTTTCCTCTTCAATTTCTCTTCTTTTCCGGAACTCTTTTTTCCACCTTAAATTAAATGCTAGGCTGGAGTCTTGGTCCCACCATATCTTGATGATTTTCAGATTTGTTAAAAGTATTTTCACTTCACTGATTACTGTCGACGTATAGAAACGGGATAGAAATTGCCCGTTCCTTTTAATTTTTTTATGAAGATAAACATCCATACGAAATAAAGTTATTGTAAAAGAATTTCCAACCTCAAATTCATTTTTGGTTAAATTATGAGTTTAATCTATGATATTTTCAACCATTTTTAAGATTAATGAATCTACTATATATATATATATATATAATTGAATTTTGTGTTCAATAATAAATTACTAAATTTAGTATAACATTCATTTTTGAAGGGAGTATGAAGAGTTTATAAAATGTGTTGCTATTATTGCCCTACCAAACATAGCATAGTCTATTGATGGTTCGTCTTTCGCCTGTAATTTTTAACTAAAAAAAAATATGTATGCTTTTTTCTTTTTTTTTTTCTTTTTTTGATTACAAAAAATTATATTTGAATTTTCATTGATTTCGTGGAATATTTAATTTGTTAAATTATTTTTTTTAAAAAGGTACAATGGAATTGGTTTAATTATACTTCGAATTTCGAAAAGTTTCATTTTAACTTTCAAAGTTTGAAATTCGTTAGAAAAGCTTTTATTGTTAAACTCATGTTCAAAAAGTTTCATTTATGTGTTGTTTATATGAACTATTTAAATACATTCGGGAGGTAAATTTGGGGCGAATAAGAAAAATTGTAAACAAAGAATAAAAAAATTGGGTGTGTGGGGTTGAAGGTGTAAAAGGACAACATGAATGGTTCATAATTTTAATGTTTTTCTTTTTTCTTTTTCCTTCCATTTGTGTTTAAATTATTCACATAAGTGTACACTACTTTTTTTACATTCAAATTTTACTGCAAAACCTACTATAGTTATTTTGAAACAAACTTTTCAACTTCAAGAGGTAAAATAAATTTTTCAACGTTTAAACAAAACCAATTTCATTATTTAGAGTTATTTTGATCATTTAACTGCTTTTTTTTTTATTATTATTATTTTATTTATATATATATAAATCAGAAGGTCAAGATTCTTACCATTTGAATGTTCACGACTCCCACGAAATTTGGAAAATTCAAATTTCAAATTTCAAATTTGTATTTAATGATGGTTAGGGTGTATGCAAATTTTATAATTCACATCTAACTATCTGAGTTGTCAATTTTTGGTGGTCTTCTTCAAGTTTTTTCCCAACTCCACACCAAAAGGTTTGCTTAAAAAAAGTTAAGGCCCAAAAAACCCATATGGTTCTTTAACTAGAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTAGAAAAAGTAGTTTTTATAGTATAATATTAAAAATAAAATGTAATTCCAAAAAATGTTAGAACCTGTTCTACAATGGTACCCTAAAAACAAAGGATGTTGGTACTATTTGTCATTGTTATAATCTTATGACGTGCCATGATGTTATGCTTACATTTGTGATAAATGTGTCTTACTAGTTTTTATAAAGATTGAGCCATAAGAAACTTGAATTAGTATGATTTATATTTGATTTTTGAGGTCTCAATTCGTAACCATGAGTTTCAAGAAGCTTTATTTTTATAAGTAGCACTGTACTCACAAACTGGGTACAAAATACATTGTTGATTTCAGGTACAATCGCAATCTGTTGACCAACTGTGTTGATGGATGGGTTATATTCAACGGCCACCAGACAGAAGAGACTGAGCATCGGAAGAATGGGCGAAACCCCTCACAAAGGAAGAAGTAGAATATGCGAGAGCCTTATCCAAGGAAGAGTAGGACATGGCAAGATCATCAAAACCTTCAAATCCACCGCCTGAAGTATCTATAGAAGCCATCTCTGGCATGGGAGTATCGCCTTCCAAGTACTGTACAATTTGGCGCATGCTTGGCCTCGCCATTGGGTTGGATTGAGAAGACAACAATCCAAGTTTCAGAACCATTTCCATTTCCTCTACTACATAATCTGATCCCAATTTTGGATCCTTGGCGTCGACAATGGCTCCTCTCGCCCAACATAAAAACACCCAATCCAGCAGTATTACATCTTCTGTCATTCCCCGAATCTCTATTGGCCTCTTTCCTGTTGCAACCTCCAGCAGAAATGCCCCAAAAGCATACACATCCATGTGGGTCGTCGGCCTGCCGGATCTGATGTGTTCTGGAGCCAAATATCCGAGCGTTCCCACTATGTGTGTTGTTTGAGGGTCTGTTCCATGGTCATACAGTCTCGCCAACCCAAAATCTCCCAATCTTCCGTTTAACTCACTGTCTAGCAAGACATTACTGGCTTTGACATCTCTGTGAATCACAACTTGCTCCCATTCTTCATGAAGGTAAAGCAGCCCCGAGGCCACCCCTTTGATGATTCGAAACCTCTGGCTCCAATTCAGACTAGGATTTGTTTCGCCAAACAGGTACTTATCTAAACTTCCATTCTGCATGTAATCATATACTAAAAGCAGCTCTCCTTTTCGTCTGCAGTAGCCTAAAAGCTGTACAAGGTTTCTGTGTCGAAGCCTCCCAAGACTAACAATCTCAGCCACAAATTCTTTCATTCCCTGCCTTGATTCATGAGAAATCCTCTTGACAGCGATTTCAAGTTTTGATTTTGGTAATACCCCTTTGTAGACTCGTCCAAATCCGCCAGAACCCAGAACCTCTTTCTCTTTAAATCCGTTTGTAGCCACGTATAAGTCTTTGTATTTGAACCTGTGAGGCCCATAATCAAGCTCCCAGTCCTCGAGCAACTCGGCGAACTTCCTCTTCCTTCTGACAACATGAACAATGCCTAAAATCACCAACAAAATAACCCCTCCAGAAATTAAAGGCAACCCAATTGTTAAAAACTTGGATGTTTGTTTTTTCCGAGGTAGCTTTGGCAGGTGGGAAATGTCAAGTCTTCGAGCCTGCCCGTTTAATCTGAAACTCCATCCTAAAACATAATGAGAAGTTGAAACCGAGCCAGTGGAGGATGAAAACCCGACGAACATGGAGCTGTTGTTTATGACAGATGAAAGGTCACGAGAGTAAGACAAGAGTGGAATTTGGGGTTTGGGTATGTTGATTGGCGCCAAAGTGACGTTGATTTCTTTGTGGATACCATCATATTCGACCCAAACCTGCATTGGTTGGCCACTTATAAGAGTCAAATTTCTTAAAGTCCCATTGTTCTCGGGATAAAATCCAGCAGTTGCAGCTCTCTCAGAGGTCAACCCATTTATATCTATGCCAACGTGATTCGCATCGATATCTTTCAACTCTAAATTCTGAATTGTGTCGAGCTCTACGGCAAAAATATGGTTGCTTGTGTTACCGTTGTTGCCGTCATTGAAAAGGCCAAGATGCTGACTTGGCTGAGCTCCGGGAAAAGTTCTCGTCGGAGCCACCACAAAGGCAATTCCATGGCCGCTTAGATTTGGGTATTCAGATATAATGGCAAAGACGAAAGTGGTTGAGAAGGACGAAACGCCATAAGAGGAATTGACAAAATTTACAGGATTAGTATAAAACCCATGGCCAATTCTTTGCCTGGTCTCGTTGGTCAGTTGCAGGAGGCCATTTGGGGTAACAACAGCCATCCCATCGAGTGATAGATTTGCAGATTGGAAGCCATTGAAGATGAAATTAGGACCTTCAGAAGCAGCTGAGACTACTAAGGCCACAATCAGGCACACCACAATTGAGAGCTTGAAAAACATGGTTTTTTTCATCTTTCTTCACAAGGGTCGATAAAAAATACAGGCTACAGCGATGAGGAAGTAGCAGGCCTCCATAAAAAGATGCTCATTCGGAGGTAAGCAATTTCTTTCAAACATCTTCTTAGGTTATTTTGAATTTTTGAGCTGGTAAGTTCCACGGATTCTGAATCTGTGGAGTCTTCATATCAATATAAGGCTCACCGTTGAAGAATTCCTGATCAACTAACTAAAGTAATAGAAAAATTAGACGAAGAAAGAGAAATCCACATTTTAAAAACCTTTAAATCCAATTGAATCTTATCGTTTTAGATGTACAAGTCTGTGTATCGAATATAAAATTTGTTGGAAGGTCTCCT

mRNA sequence

CTCTCTCTCTCTCTCTGGCCATTTCTCTGATAGCTATGATTCGCGTCGCCGTTCAGCTGTCAAAAACCACTGCGGCGGTCGTTCGAACTGCAGGACTGGGCTCCAGCTCCCGCTTCGATCTTCTCTCCTCTCCATCTTCCTCATGGTTAGCTTCACCGTTGAGATCACTTTACGTTGGAATAGACCGTCCGAATGCGAGCCCGGTCTCTTGTCAGATGATTAATTATGCTCTGTCTCACGCTAGGTCTCAGAAATCAGACGAATCGTACGCACAAGGTCGTCTGGTTCTGGAGCAGTGCCTCTCTGCTCAGTCGAGTGAAGGCCAAGATGCCGATAACTCTAGGGGAGCGGTATTACTTGCCATGTCTACCTTGTTTGCTGAAAGAGGTGATATTCACGACGCTATAGATAAGCTTCAACGAGTTGAGGATTTAGCACATTGCTCTCTAGATATTAGAGTTGCTGCTCTTGAAGCACTTGCTGGACTTCATCTCGAACTAAACCTGGATGATTCTTCATCAGATATCGCAGATAAATGCTTAAAACTATTTGAAAATAGCAAGGTTGCTGATGATGGAAATTCTGGCGTTCTGAGAGCTCGTGTTAAAGCTGTAAAGGGGCTGGTTGAGCTTGTAAAAAATAACCTTGATGCAGCTGAATCGTTATTTGAAGGGTTTCAAACTATTGAAAGATGTGCTGGTAGTGCTGCATTTGCATATGGAGAATTCTTAGTTGCCTCACAGAATTTTTCATCAGCAAAAGAGGTGTATCAAAGAGTAATTGAAGTGGGATCCGAAGTCCAAGATTTGAGTGAGCAATGTGCTTTAGCTGGTGGTAAGATGTCTCCAATGGAAGTGTTAGTGGCTGCGACTTGTGCTTTAGGGCAGCTTGAGGGGCACTTGGGGAATTTTTCTGAAGCCGAGGATATACTGACAAACGCGTTGACCAAAGCAGAAGCATATTTTGGATCTCACCATCCCAAGGTTGGAGTTGTCTTAACCTGCATAGCACTCATGTATCGATACAAAGCAAAGAAGGAGCATTCGAGTTCACTTTTGATTCAGGAGATTTCTCTAAAAATTCATTTACAGGGACTCTATAGGAGAGCAATGGACTTGATGAAAGTTTCACCAGAAGGCACGGGAGAACAAGTAAAGGTGGACAGATGTGACATTGCAAATATCGCCGGAGGTGCGTACGCGGAGATACTTGACGTCCAAAAGAATAGAAAGGCTGAAGGACAGATGATGAGGAAATGGTCGGAACTTGCTTGGAAGAATCGTAGGATATCACTGGAAGAGGTACTAGACATAGCTCAGCCGCCTTCCAAGGTGCCTATTATCGATACTCGACTCTGTAGGCTTATTTAATTTGCAATATTTTCGAGTTCTGGTTGTTATGCATCTTTATAGAAGACAAGAGGGTGAGCACATTCTCTAGGCTGACAATGTTGTGTAATTTACTCATGAAGTACAAGAACTTGAAGAATGTAGAATTCTCTGATACAGTTGAGAGGTCTATATTACAGTTACAATTTTGATTTAAAAAAAAAAAACACGAAGGATCTCAAGATGATAATAAGCCTTCTGGAAATCAAAGAGGAAGATCCAGTCCTTTCCCAATATCAACTCCAATCACCTGAAGTATACCCTTGTTCAATATCTGGAAAAACAGAAAATAAATCAATAAATAAAACCCCTAAACTTGGATATAGAAGGTAAAAGAAAGAAACTTTTCTTTGAAAAGAAAAAAGAAAGAAAAGCTCACCAGCTCTACTACGAATATCCCAATGAGGCCTATCATGCTGGCTCTGGAATTCCAGATTTCAGCAGTTTTAGTGAATCCAAGAAACGGGGCTTCAAATTTCGGCTGTACTTTTGGCAATTCAACCTTCAAAACAGAAATGAAAAGGTGAAACAGAATTGGGAAAAGTCCAGTGGTTTGAAGAGGATAGTCAGCTTACTCCAGCCGGAGGCTTTGCGGCCTGAACCCTAAAAGGGGCACGAGCCCTTCTGTTATTGGCACGGACAGACCCAACTTGGAAGAGACAGAGTCGGCCGTCTTGACGGTCACAGATCGGAGCTCTGGCCGGAAGAAGAGAAGACGATAAAATCGTAGCGGAGGACGCCATTACTTGGTAATGCCCCAAACACAACGACAACCACAACCACAACCACGGCTTCGGTACAATCGCAATCTGTTGACCAACTGTGTTGATGGATGGGTTATATTCAACGGCCACCAGACAGAAGAGACTGAGCATCGGAAGAATGGGCGAAACCCCTCACAAAGGAAGAAGTAGAATATGCGAGAGCCTTATCCAAGGAAGAGTAGGACATGGCAAGATCATCAAAACCTTCAAATCCACCGCCTGAAGTATCTATAGAAGCCATCTCTGGCATGGGAGTATCGCCTTCCAAGTACTGTACAATTTGGCGCATGCTTGGCCTCGCCATTGGGTTGGATTGAGAAGACAACAATCCAAGTTTCAGAACCATTTCCATTTCCTCTACTACATAATCTGATCCCAATTTTGGATCCTTGGCGTCGACAATGGCTCCTCTCGCCCAACATAAAAACACCCAATCCAGCAGTATTACATCTTCTGTCATTCCCCGAATCTCTATTGGCCTCTTTCCTGTTGCAACCTCCAGCAGAAATGCCCCAAAAGCATACACATCCATGTGGGTCGTCGGCCTGCCGGATCTGATGTGTTCTGGAGCCAAATATCCGAGCGTTCCCACTATGTGTGTTGTTTGAGGGTCTGTTCCATGGTCATACAGTCTCGCCAACCCAAAATCTCCCAATCTTCCGTTTAACTCACTGTCTAGCAAGACATTACTGGCTTTGACATCTCTGTGAATCACAACTTGCTCCCATTCTTCATGAAGGTAAAGCAGCCCCGAGGCCACCCCTTTGATGATTCGAAACCTCTGGCTCCAATTCAGACTAGGATTTGTTTCGCCAAACAGTAGCCTAAAAGCTGTACAAGGTTTCTGTGTCGAAGCCTCCCAAGACTAACAATCTCAGCCACAAATTCTTTCATTCCCTGCCTTGATTCATGAGAAATCCTCTTGACAGCGATTTCAAGTTTTGATTTTGGTAATACCCCTTTGTAGACTCGTCCAAATCCGCCAGAACCCAGAACCTCTTTCTCTTTAAATCCGTTTGTAGCCACGTATAAGTCTTTGTATTTGAACCTGTGAGGCCCATAATCAAGCTCCCAGTCCTCGAGCAACTCGGCGAACTTCCTCTTCCTTCTGACAACATGAACAATGCCTAAAATCACCAACAAAATAACCCCTCCAGAAATTAAAGGCAACCCAATTGTTAAAAACTTGGATGTTTGTTTTTTCCGAGGTAGCTTTGGCAGGTGGGAAATGTCAAGTCTTCGAGCCTGCCCGTTTAATCTGAAACTCCATCCTAAAACATAATGAGAAGTTGAAACCGAGCCAGTGGAGGATGAAAACCCGACGAACATGGAGCTGTTGTTTATGACAGATGAAAGGTCACGAGAGTAAGACAAGAGTGGAATTTGGGGTTTGGGTATGTTGATTGGCGCCAAAGTGACGTTGATTTCTTTGTGGATACCATCATATTCGACCCAAACCTGCATTGGTTGGCCACTTATAAGAGTCAAATTTCTTAAAGTCCCATTGTTCTCGGGATAAAATCCAGCAGTTGCAGCTCTCTCAGAGGTCAACCCATTTATATCTATGCCAACGTGATTCGCATCGATATCTTTCAACTCTAAATTCTGAATTGTGTCGAGCTCTACGGCAAAAATATGGTTGCTTGTGTTACCGTTGTTGCCGTCATTGAAAAGGCCAAGATGCTGACTTGGCTGAGCTCCGGGAAAAGTTCTCGTCGGAGCCACCACAAAGGCAATTCCATGGCCGCTTAGATTTGGGTATTCAGATATAATGGCAAAGACGAAAGTGGTTGAGAAGGACGAAACGCCATAAGAGGAATTGACAAAATTTACAGGATTAGTATAAAACCCATGGCCAATTCTTTGCCTGGTCTCGTTGGTCAGTTGCAGGAGGCCATTTGGGGTAACAACAGCCATCCCATCGAGTGATAGATTTGCAGATTGGAAGCCATTGAAGATGAAATTAGGACCTTCAGAAGCAGCTGAGACTACTAAGGCCACAATCAGGCACACCACAATTGAGAGCTTGAAAAACATGGTTTTTTTCATCTTTCTTCACAAGGGTCGATAAAAAATACAGGCTACAGCGATGAGGAAGTAGCAGGCCTCCATAAAAAGATGCTCATTCGGAGGTAAGCAATTTCTTTCAAACATCTTCTTAGGTTATTTTGAATTTTTGAGCTGGTAAGTTCCACGGATTCTGAATCTGTGGAGTCTTCATATCAATATAAGGCTCACCGTTGAAGAATTCCTGATCAACTAACTAAAGTAATAGAAAAATTAGACGAAGAAAGAGAAATCCACATTTTAAAAACCTTTAAATCCAATTGAATCTTATCGTTTTAGATGTACAAGTCTGTGTATCGAATATAAAATTTGTTGGAAGGTCTCCT

Coding sequence (CDS)

ATGATTCGCGTCGCCGTTCAGCTGTCAAAAACCACTGCGGCGGTCGTTCGAACTGCAGGACTGGGCTCCAGCTCCCGCTTCGATCTTCTCTCCTCTCCATCTTCCTCATGGTTAGCTTCACCGTTGAGATCACTTTACGTTGGAATAGACCGTCCGAATGCGAGCCCGGTCTCTTGTCAGATGATTAATTATGCTCTGTCTCACGCTAGGTCTCAGAAATCAGACGAATCGTACGCACAAGGTCGTCTGGTTCTGGAGCAGTGCCTCTCTGCTCAGTCGAGTGAAGGCCAAGATGCCGATAACTCTAGGGGAGCGGTATTACTTGCCATGTCTACCTTGTTTGCTGAAAGAGGTGATATTCACGACGCTATAGATAAGCTTCAACGAGTTGAGGATTTAGCACATTGCTCTCTAGATATTAGAGTTGCTGCTCTTGAAGCACTTGCTGGACTTCATCTCGAACTAAACCTGGATGATTCTTCATCAGATATCGCAGATAAATGCTTAAAACTATTTGAAAATAGCAAGGTTGCTGATGATGGAAATTCTGGCGTTCTGAGAGCTCGTGTTAAAGCTGTAAAGGGGCTGGTTGAGCTTGTAAAAAATAACCTTGATGCAGCTGAATCGTTATTTGAAGGGTTTCAAACTATTGAAAGATGTGCTGGTAGTGCTGCATTTGCATATGGAGAATTCTTAGTTGCCTCACAGAATTTTTCATCAGCAAAAGAGGTGTATCAAAGAGTAATTGAAGTGGGATCCGAAGTCCAAGATTTGAGTGAGCAATGTGCTTTAGCTGGTGGTAAGATGTCTCCAATGGAAGTGTTAGTGGCTGCGACTTGTGCTTTAGGGCAGCTTGAGGGGCACTTGGGGAATTTTTCTGAAGCCGAGGATATACTGACAAACGCGTTGACCAAAGCAGAAGCATATTTTGGATCTCACCATCCCAAGGTTGGAGTTGTCTTAACCTGCATAGCACTCATGTATCGATACAAAGCAAAGAAGGAGCATTCGAGTTCACTTTTGATTCAGGAGATTTCTCTAAAAATTCATTTACAGGGACTCTATAGGAGAGCAATGGACTTGATGAAAGTTTCACCAGAAGGCACGGGAGAACAAGTAAAGGTGGACAGATGTGACATTGCAAATATCGCCGGAGGTGCGTACGCGGAGATACTTGACGTCCAAAAGAATAGAAAGGCTGAAGGACAGATGATGAGGAAATGGTCGGAACTTGCTTGGAAGAATCGTAGGATATCACTGGAAGAGGTACTAGACATAGCTCAGCCGCCTTCCAAGGTGCCTATTATCGATACTCGACTCTGTAGGCTTATTTAA

Protein sequence

MIRVAVQLSKTTAAVVRTAGLGSSSRFDLLSSPSSSWLASPLRSLYVGIDRPNASPVSCQMINYALSHARSQKSDESYAQGRLVLEQCLSAQSSEGQDADNSRGAVLLAMSTLFAERGDIHDAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNLDDSSSDIADKCLKLFENSKVADDGNSGVLRARVKAVKGLVELVKNNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSSAKEVYQRVIEVGSEVQDLSEQCALAGGKMSPMEVLVAATCALGQLEGHLGNFSEAEDILTNALTKAEAYFGSHHPKVGVVLTCIALMYRYKAKKEHSSSLLIQEISLKIHLQGLYRRAMDLMKVSPEGTGEQVKVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISLEEVLDIAQPPSKVPIIDTRLCRLI

Homology

[Close]

BLAST of CmoCh14G001220 vs. ExPASy TrEMBL
Match: A0A6J1F2A0 (uncharacterized protein LOC111441740 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441740 PE=4 SV=1)

HSP 1 Score: 828.2 bits (2138), Expect = 1.7e-236
Identity = 436/444 (98.20%), Postives = 436/444 (98.20%), Query Frame = 0


Query: 1   MIRVAVQLSKTTAAVVRTAGLGSSSRFDLLSSPSSSWLASPLRSLYVGIDRPNASPVSCQ 60
           MIRVAVQLSKTTAAVVRTAGLGSSSRFDLLSSPSSSWLASPLRSLYVGIDRPNASPVSCQ
Sbjct: 1   MIRVAVQLSKTTAAVVRTAGLGSSSRFDLLSSPSSSWLASPLRSLYVGIDRPNASPVSCQ 60

Query: 61  MINYALSHARSQKSDESYAQGRLVLEQCLSAQSSEGQDADNSRGAVLLAMSTLFAERGDI 120
           MINYALSHARSQKSDESYAQGRLVLEQCLSAQSSEGQDADNSRGAVLLAMSTLFAERGDI
Sbjct: 61  MINYALSHARSQKSDESYAQGRLVLEQCLSAQSSEGQDADNSRGAVLLAMSTLFAERGDI 120

Query: 121 HDAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNLDDSSSDIADKCLKLFENSKVADD 180
           HDAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNLDDSSSDIADKCLKLFENSKVADD
Sbjct: 121 HDAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNLDDSSSDIADKCLKLFENSKVADD 180

Query: 181 GNSGVLRARVKAVKGLVELVKNNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSS 240
           GNSGVLRARVKAVKGLVELVKNNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSS
Sbjct: 181 GNSGVLRARVKAVKGLVELVKNNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSS 240

Query: 241 AKEVYQRVIEVGSEVQDLSEQCALAGGKMSPMEVLVAATCALGQLEGHLGNFSEAEDILT 300
           AKEVYQRVIEVGSEVQDLSEQCALAGGKMSPMEVLVAATCALGQLEGHLGNFSEAEDILT
Sbjct: 241 AKEVYQRVIEVGSEVQDLSEQCALAGGKMSPMEVLVAATCALGQLEGHLGNFSEAEDILT 300

Query: 301 NALTKAEAYFGSHHPKVGVVLTCIALMYRYKAKKEHSSSLLIQEISLKIHLQGLYRRAMD 360
           NALTKAEAYFGSHHPKVGVVLTCIALMYRYKAKKEHSSSLLIQE        GLYRRAMD
Sbjct: 301 NALTKAEAYFGSHHPKVGVVLTCIALMYRYKAKKEHSSSLLIQE--------GLYRRAMD 360

Query: 361 LMKVSPEGTGEQVKVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISL 420
           LMKVSPEGTGEQVKVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISL
Sbjct: 361 LMKVSPEGTGEQVKVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISL 420

Query: 421 EEVLDIAQPPSKVPIIDTRLCRLI 445
           EEVLDIAQPPSKVPIIDTRLCRLI
Sbjct: 421 EEVLDIAQPPSKVPIIDTRLCRLI 436

[Close]

BLAST of CmoCh14G001220 vs. ExPASy TrEMBL
Match: A0A6J1J0W3 (uncharacterized protein LOC111482443 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482443 PE=4 SV=1)

HSP 1 Score: 805.1 bits (2078), Expect = 1.5e-229
Identity = 423/444 (95.27%), Postives = 431/444 (97.07%), Query Frame = 0


Query: 1   MIRVAVQLSKTTAAVVRTAGLGSSSRFDLLSSPSSSWLASPLRSLYVGIDRPNASPVSCQ 60
           MIRVAV+LSKT+AAVVRTAGLGSSSRFDLLSSPS SWLASPLRSL+VGIDRPNAS V+CQ
Sbjct: 1   MIRVAVKLSKTSAAVVRTAGLGSSSRFDLLSSPSFSWLASPLRSLHVGIDRPNASSVTCQ 60

Query: 61  MINYALSHARSQKSDESYAQGRLVLEQCLSAQSSEGQDADNSRGAVLLAMSTLFAERGDI 120
           MINYALSHARSQKSDESYAQGRLVLEQC SAQSSEGQDADNSRGAVLLAMSTLFAERGDI
Sbjct: 61  MINYALSHARSQKSDESYAQGRLVLEQCFSAQSSEGQDADNSRGAVLLAMSTLFAERGDI 120

Query: 121 HDAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNLDDSSSDIADKCLKLFENSKVADD 180
           HDAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNLDDSSSDIADKCLKLFENSKVADD
Sbjct: 121 HDAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNLDDSSSDIADKCLKLFENSKVADD 180

Query: 181 GNSGVLRARVKAVKGLVELVKNNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSS 240
           GNSGVLRARVKAVKGLVELV NNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSS
Sbjct: 181 GNSGVLRARVKAVKGLVELVTNNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSS 240

Query: 241 AKEVYQRVIEVGSEVQDLSEQCALAGGKMSPMEVLVAATCALGQLEGHLGNFSEAEDILT 300
           AKEVYQRVIEVGSEVQDLSEQCALAGG MSPMEVLVAATCALGQLEGHLGNFSEAEDILT
Sbjct: 241 AKEVYQRVIEVGSEVQDLSEQCALAGGNMSPMEVLVAATCALGQLEGHLGNFSEAEDILT 300

Query: 301 NALTKAEAYFGSHHPKVGVVLTCIALMYRYKAKKEHSSSLLIQEISLKIHLQGLYRRAMD 360
           NALTKAEAYFGSHHPKVGVVLTCIALM+RYKAKKEHSSSLLIQE        GLYRRA+D
Sbjct: 301 NALTKAEAYFGSHHPKVGVVLTCIALMFRYKAKKEHSSSLLIQE--------GLYRRAID 360

Query: 361 LMKVSPEGTGEQVKVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISL 420
           LMKVSP+GTGEQ+KVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISL
Sbjct: 361 LMKVSPKGTGEQLKVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISL 420

Query: 421 EEVLDIAQPPSKVPIIDTRLCRLI 445
           EEVLDIAQPPSKVPIIDTRLCRLI
Sbjct: 421 EEVLDIAQPPSKVPIIDTRLCRLI 436

[Close]

BLAST of CmoCh14G001220 vs. ExPASy TrEMBL
Match: A0A6J1F3A1 (uncharacterized protein LOC111441740 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441740 PE=4 SV=1)

HSP 1 Score: 780.0 bits (2013), Expect = 5.2e-222
Identity = 417/444 (93.92%), Postives = 417/444 (93.92%), Query Frame = 0


Query: 1   MIRVAVQLSKTTAAVVRTAGLGSSSRFDLLSSPSSSWLASPLRSLYVGIDRPNASPVSCQ 60
           MIRVAVQLSKTTAAVVRTAGLGSSSRFDLLSSPSSSWLASPLRSLYVGIDRPNASPVSCQ
Sbjct: 1   MIRVAVQLSKTTAAVVRTAGLGSSSRFDLLSSPSSSWLASPLRSLYVGIDRPNASPVSCQ 60

Query: 61  MINYALSHARSQKSDESYAQGRLVLEQCLSAQSSEGQDADNSRGAVLLAMSTLFAERGDI 120
           MINYALSHARSQKSDESYAQGRLVLEQCLSAQSSEGQDADNSRGAVLLAMSTLFAERGDI
Sbjct: 61  MINYALSHARSQKSDESYAQGRLVLEQCLSAQSSEGQDADNSRGAVLLAMSTLFAERGDI 120

Query: 121 HDAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNLDDSSSDIADKCLKLFENSKVADD 180
           HDAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNL                   VADD
Sbjct: 121 HDAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNL-------------------VADD 180

Query: 181 GNSGVLRARVKAVKGLVELVKNNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSS 240
           GNSGVLRARVKAVKGLVELVKNNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSS
Sbjct: 181 GNSGVLRARVKAVKGLVELVKNNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSS 240

Query: 241 AKEVYQRVIEVGSEVQDLSEQCALAGGKMSPMEVLVAATCALGQLEGHLGNFSEAEDILT 300
           AKEVYQRVIEVGSEVQDLSEQCALAGGKMSPMEVLVAATCALGQLEGHLGNFSEAEDILT
Sbjct: 241 AKEVYQRVIEVGSEVQDLSEQCALAGGKMSPMEVLVAATCALGQLEGHLGNFSEAEDILT 300

Query: 301 NALTKAEAYFGSHHPKVGVVLTCIALMYRYKAKKEHSSSLLIQEISLKIHLQGLYRRAMD 360
           NALTKAEAYFGSHHPKVGVVLTCIALMYRYKAKKEHSSSLLIQE        GLYRRAMD
Sbjct: 301 NALTKAEAYFGSHHPKVGVVLTCIALMYRYKAKKEHSSSLLIQE--------GLYRRAMD 360

Query: 361 LMKVSPEGTGEQVKVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISL 420
           LMKVSPEGTGEQVKVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISL
Sbjct: 361 LMKVSPEGTGEQVKVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISL 417

Query: 421 EEVLDIAQPPSKVPIIDTRLCRLI 445
           EEVLDIAQPPSKVPIIDTRLCRLI
Sbjct: 421 EEVLDIAQPPSKVPIIDTRLCRLI 417

[Close]

BLAST of CmoCh14G001220 vs. ExPASy TrEMBL
Match: A0A6J1J9A4 (uncharacterized protein LOC111482443 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482443 PE=4 SV=1)

HSP 1 Score: 756.9 bits (1953), Expect = 4.7e-215
Identity = 404/444 (90.99%), Postives = 412/444 (92.79%), Query Frame = 0


Query: 1   MIRVAVQLSKTTAAVVRTAGLGSSSRFDLLSSPSSSWLASPLRSLYVGIDRPNASPVSCQ 60
           MIRVAV+LSKT+AAVVRTAGLGSSSRFDLLSSPS SWLASPLRSL+VGIDRPNAS V+CQ
Sbjct: 1   MIRVAVKLSKTSAAVVRTAGLGSSSRFDLLSSPSFSWLASPLRSLHVGIDRPNASSVTCQ 60

Query: 61  MINYALSHARSQKSDESYAQGRLVLEQCLSAQSSEGQDADNSRGAVLLAMSTLFAERGDI 120
           MINYALSHARSQKSDESYAQGRLVLEQC SAQSSEGQDADNSRGAVLLAMSTLFAERGDI
Sbjct: 61  MINYALSHARSQKSDESYAQGRLVLEQCFSAQSSEGQDADNSRGAVLLAMSTLFAERGDI 120

Query: 121 HDAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNLDDSSSDIADKCLKLFENSKVADD 180
           HDAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNL                   VADD
Sbjct: 121 HDAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNL-------------------VADD 180

Query: 181 GNSGVLRARVKAVKGLVELVKNNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSS 240
           GNSGVLRARVKAVKGLVELV NNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSS
Sbjct: 181 GNSGVLRARVKAVKGLVELVTNNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSS 240

Query: 241 AKEVYQRVIEVGSEVQDLSEQCALAGGKMSPMEVLVAATCALGQLEGHLGNFSEAEDILT 300
           AKEVYQRVIEVGSEVQDLSEQCALAGG MSPMEVLVAATCALGQLEGHLGNFSEAEDILT
Sbjct: 241 AKEVYQRVIEVGSEVQDLSEQCALAGGNMSPMEVLVAATCALGQLEGHLGNFSEAEDILT 300

Query: 301 NALTKAEAYFGSHHPKVGVVLTCIALMYRYKAKKEHSSSLLIQEISLKIHLQGLYRRAMD 360
           NALTKAEAYFGSHHPKVGVVLTCIALM+RYKAKKEHSSSLLIQE        GLYRRA+D
Sbjct: 301 NALTKAEAYFGSHHPKVGVVLTCIALMFRYKAKKEHSSSLLIQE--------GLYRRAID 360

Query: 361 LMKVSPEGTGEQVKVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISL 420
           LMKVSP+GTGEQ+KVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISL
Sbjct: 361 LMKVSPKGTGEQLKVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISL 417

Query: 421 EEVLDIAQPPSKVPIIDTRLCRLI 445
           EEVLDIAQPPSKVPIIDTRLCRLI
Sbjct: 421 EEVLDIAQPPSKVPIIDTRLCRLI 417

[Close]

BLAST of CmoCh14G001220 vs. ExPASy TrEMBL
Match: A0A5A7TLN0 (Tetratricopeptide repeat (TPR)-like superfamily protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004550 PE=4 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 8.4e-196
Identity = 366/443 (82.62%), Postives = 399/443 (90.07%), Query Frame = 0


Query: 3   RVAVQLSKTTAAVV-RTAGLGSSSRFDLLSSPSSSWLASPLRSLYVGIDRPNASPVSCQM 62
           RV VQLSKT AA   R A LGSSSRF LLSSPSSS LASP R L+VG+DRPNASPV+ QM
Sbjct: 4   RVVVQLSKTVAATAFRAASLGSSSRFSLLSSPSSSRLASPWRLLHVGMDRPNASPVTRQM 63

Query: 63  INYALSHARSQKSDESYAQGRLVLEQCLSAQSSEGQDADNSRGAVLLAMSTLFAERGDIH 122
           INYALSHARSQ+SDESYAQG LVLEQCLS QSSEGQDADNSRGAVLLAMSTL AERGDIH
Sbjct: 64  INYALSHARSQRSDESYAQGLLVLEQCLSVQSSEGQDADNSRGAVLLAMSTLLAERGDIH 123

Query: 123 DAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNLDDSSSDIADKCLKLFENSKVADDG 182
           +AIDKLQR+EDL HCSLDIRVAALEALAGLHL L+L+DSSS IA+KCL+LF+N ++ADDG
Sbjct: 124 NAIDKLQRIEDLIHCSLDIRVAALEALAGLHLVLDLNDSSSAIANKCLQLFKNGELADDG 183

Query: 183 NSGVLRARVKAVKGLVELVKNNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSSA 242
           NS VLRARVKAVKGLVELV+NNLDAAESLFEGFQTIERCAGSAAF YGEFLVASQNFS+A
Sbjct: 184 NSEVLRARVKAVKGLVELVQNNLDAAESLFEGFQTIERCAGSAAFTYGEFLVASQNFSAA 243

Query: 243 KEVYQRVIEVGSEVQDLSEQCALAGGKMSPMEVLVAATCALGQLEGHLGNFSEAEDILTN 302
           KEVYQRVIEVGSEV+D SEQCALAGG MSPMEVLVAATCALGQLEG+LGNF+EAED+LTN
Sbjct: 244 KEVYQRVIEVGSEVKDSSEQCALAGGNMSPMEVLVAATCALGQLEGNLGNFAEAEDLLTN 303

Query: 303 ALTKAEAYFGSHHPKVGVVLTCIALMYRYKAKKEHSSSLLIQEISLKIHLQGLYRRAMDL 362
           ALTK E YFGSHHPKVGV+LTCIALM+R+KA+KEHSSS+LIQE        GLYRRA+DL
Sbjct: 304 ALTKTEEYFGSHHPKVGVILTCIALMFRHKARKEHSSSILIQE--------GLYRRAIDL 363

Query: 363 MKVSPEGTGEQVKVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISLE 422
           MKVSPEG+G Q KVDRC+IA IAG AYAEILDVQKNRK E +M+R W   AW+NRRIS+E
Sbjct: 364 MKVSPEGSGGQSKVDRCEIAAIAGEAYAEILDVQKNRKPEARMVRGWVRDAWRNRRISME 423

Query: 423 EVLDIAQPPSKVPIIDTRLCRLI 445
           EVLDI QPPSKVP+IDTR+CRLI
Sbjct: 424 EVLDIGQPPSKVPVIDTRICRLI 438

[Close]

BLAST of CmoCh14G001220 vs. TAIR 10
Match: AT5G02130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 370.2 bits (949), Expect = 2.4e-102
Identity = 214/444 (48.20%), Postives = 296/444 (66.67%), Query Frame = 0


Query: 1   MIRVAVQLSKTTAAVVRTAGLGSSSRFDLLSSPSSSWLASPLRSLYVGIDRPNASPVSCQ 60
           MIR A + S+  AA +R  G   S R +L+        ++PLR ++  I  PNA+ V+ Q
Sbjct: 1   MIRAAAKFSREAAATIR--GRTISVRGNLIR------YSTPLRLIHGEISVPNANHVAIQ 60

Query: 61  MINYALSHARSQKSDESYAQGRLVLEQCLSAQSSEGQDADNSRGAVLLAMSTLFAERGDI 120
           M+NYALSHARSQKSDESYAQG LVLEQCL  Q ++ Q + +S+  VLLAMS L  E G+ 
Sbjct: 61  MVNYALSHARSQKSDESYAQGMLVLEQCLGNQPNDDQVSHDSKATVLLAMSDLLYESGNS 120

Query: 121 HDAIDKLQRVEDLAHCSLDIRVAALEALAGLHLELNLDDSSSDIADKCLKLFENSKVADD 180
            +AI++L++V  L H SL IRV A+EAL GL ++   DD+S D+AD+ LKL + S    +
Sbjct: 121 SEAIERLKQVMTLTHSSLAIRVVAVEALVGLLIQSGQDDASLDVADEFLKLVKES--GHE 180

Query: 181 GNSGVLRARVKAVKGLVELVKNNLDAAESLFEGFQTIERCAGSAAFAYGEFLVASQNFSS 240
              GV+ A VKA+KGL ELVK N+++AESLF G +  E C G+ A +YGE+L A+ NF  
Sbjct: 181 NLQGVV-ATVKAIKGLAELVKGNIESAESLFRGLENHESCKGNIALSYGEYLHATGNFEL 240

Query: 241 AKEVYQRVIEVGSEVQDLSEQCALAGGKMSPMEVLVAATCALGQLEGHLGNFSEAEDILT 300
           AKE+YQ+ I+  +E ++    C      M+   V +AAT ALGQLE H+GNF  AE  LT
Sbjct: 241 AKEMYQKAIQGVTETKESMCSC-----NMNLKAVSLAATFALGQLESHIGNFGVAEKTLT 300

Query: 301 NALTKAEAYFGSHHPKVGVVLTCIALMYRYKAKKEHSSSLLIQEISLKIHLQGLYRRAMD 360
           +ALTK E ++G +HPKVGV+LT +ALMY  KAK+E SSS+LIQE        GLYR+A++
Sbjct: 301 DALTKTEEHYGDNHPKVGVILTAVALMYGNKAKQERSSSILIQE--------GLYRKALE 360

Query: 361 LMKVSPEGTGEQVKVDRCDIANIAGGAYAEILDVQKNRKAEGQMMRKWSELAWKNRRISL 420
           LMK  P  +   + ++  ++  +A   YAE+L +Q+NRK+EG+ M+ W+E AW+N+RISL
Sbjct: 361 LMKAPPLDSKGIINMENQEVIALARAGYAELLLIQENRKSEGEKMKSWAESAWRNKRISL 420

Query: 421 EEVLDIAQPPSKVPIIDTRLCRLI 445
            E L +++P  KV IID R  R++
Sbjct: 421 SEALTLSEPLGKVAIIDARTTRVL 420

The following BLAST results are available for this feature:

BLAST of CmoCh14G001220 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh14G001220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F2A0	1.7e-236	98.20	uncharacterized protein LOC111441740 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J0W3	1.5e-229	95.27	uncharacterized protein LOC111482443 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F3A1	5.2e-222	93.92	uncharacterized protein LOC111441740 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J9A4	4.7e-215	90.99	uncharacterized protein LOC111482443 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7TLN0	8.4e-196	82.62	Tetratricopeptide repeat (TPR)-like superfamily protein, putative isoform 1 OS=C...	[more]

BLAST of CmoCh14G001220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02130.1	2.4e-102	48.20	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 59..258 e-value: 1.5E-7 score: 33.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 265..401 e-value: 3.5E-6 score: 28.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 108..305
None	No IPR available	PANTHER	PTHR47868	OS05G0457700 PROTEIN	coord: 1..443
None	No IPR available	PANTHER	PTHR47868:SF2	OS05G0457700 PROTEIN	coord: 1..443

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G001220.1	CmoCh14G001220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding