CmoCh14G000360 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G000360
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	PRA1 family protein
Location	Cmo_Chr14: 181483 .. 182157 (+)
RNA-Seq Expression	CmoCh14G000360
Synteny	CmoCh14G000360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCCTCTCCGGCCATACTTCCCATCTCCAATCCTCAATCCCCCGCCATCCTCTCCGCTGCATCCGGCGGTTCTCTCCAATCTCAAGGCCCTGTCACCACGCCGGCCTTCCGCGTCTTCATTAACCACATATCGGAATCTCTCCGGCACGGCCTCTCCCAGCGAAAACCATGGGCCGAACTTGCGGATCGGACGGCATTTTCAAAGCCCGAATCATTATCCGAAGCGACCTCGCGAATTCGCAAGAATTACTCCTATTTTCGCGTCAATTATCTCGCTGTGGTTGCTCTGATCCTTGGCTTTTCTCTCGTTTCTCATCCGTTTTCCCTTATTCTTCTGGTCGGGCTTTTATCCTCGTGGATATTCCTCTACCTCTTCCGTCCGTCGGATCAGCCGCTGGTTGTATTCGGCCGCACATTCAAGGACAGTGAAACCCTAATTCTCCTGGTTTTGCTCAGCGTGTTCGTCGTGTTCCTCACCAGCGTTGGATCGGTCCTCGTTTCGGCTCTTTTGGTCGGTGTGGCTCTGGTTTGTGCCCACGGCGCGTTTAGAGTTCCCGAAGATCTCTTCCTGGACGAACAAGACAATGTATCCCCCGGATTTCTCTCGTTCTTTAGCAGCGCGGCTTCCAGCGCTGCCGCTGCCGCCGTGCCTGTGGCTGCTCGCACGTGA

mRNA sequence

ATGTCTTCCTCTCCGGCCATACTTCCCATCTCCAATCCTCAATCCCCCGCCATCCTCTCCGCTGCATCCGGCGGTTCTCTCCAATCTCAAGGCCCTGTCACCACGCCGGCCTTCCGCGTCTTCATTAACCACATATCGGAATCTCTCCGGCACGGCCTCTCCCAGCGAAAACCATGGGCCGAACTTGCGGATCGGACGGCATTTTCAAAGCCCGAATCATTATCCGAAGCGACCTCGCGAATTCGCAAGAATTACTCCTATTTTCGCGTCAATTATCTCGCTGTGGTTGCTCTGATCCTTGGCTTTTCTCTCGTTTCTCATCCGTTTTCCCTTATTCTTCTGGTCGGGCTTTTATCCTCGTGGATATTCCTCTACCTCTTCCGTCCGTCGGATCAGCCGCTGGTTGTATTCGGCCGCACATTCAAGGACAGTGAAACCCTAATTCTCCTGGTTTTGCTCAGCGTGTTCGTCGTGTTCCTCACCAGCGTTGGATCGGTCCTCGTTTCGGCTCTTTTGGTCGGTGTGGCTCTGGTTTGTGCCCACGGCGCGTTTAGAGTTCCCGAAGATCTCTTCCTGGACGAACAAGACAATGTATCCCCCGGATTTCTCTCGTTCTTTAGCAGCGCGGCTTCCAGCGCTGCCGCTGCCGCCGTGCCTGTGGCTGCTCGCACGTGA

Coding sequence (CDS)

ATGTCTTCCTCTCCGGCCATACTTCCCATCTCCAATCCTCAATCCCCCGCCATCCTCTCCGCTGCATCCGGCGGTTCTCTCCAATCTCAAGGCCCTGTCACCACGCCGGCCTTCCGCGTCTTCATTAACCACATATCGGAATCTCTCCGGCACGGCCTCTCCCAGCGAAAACCATGGGCCGAACTTGCGGATCGGACGGCATTTTCAAAGCCCGAATCATTATCCGAAGCGACCTCGCGAATTCGCAAGAATTACTCCTATTTTCGCGTCAATTATCTCGCTGTGGTTGCTCTGATCCTTGGCTTTTCTCTCGTTTCTCATCCGTTTTCCCTTATTCTTCTGGTCGGGCTTTTATCCTCGTGGATATTCCTCTACCTCTTCCGTCCGTCGGATCAGCCGCTGGTTGTATTCGGCCGCACATTCAAGGACAGTGAAACCCTAATTCTCCTGGTTTTGCTCAGCGTGTTCGTCGTGTTCCTCACCAGCGTTGGATCGGTCCTCGTTTCGGCTCTTTTGGTCGGTGTGGCTCTGGTTTGTGCCCACGGCGCGTTTAGAGTTCCCGAAGATCTCTTCCTGGACGAACAAGACAATGTATCCCCCGGATTTCTCTCGTTCTTTAGCAGCGCGGCTTCCAGCGCTGCCGCTGCCGCCGTGCCTGTGGCTGCTCGCACGTGA

Protein sequence

MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAELADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSWIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAHGAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAVPVAART

Homology

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BLAST of CmoCh14G000360 vs. ExPASy Swiss-Prot
Match: O80915 (PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 8.8e-74
Identity = 143/217 (65.90%), Postives = 182/217 (83.87%), Query Frame = 0


Query: 2   SSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAE 61
           SS+P +LPISNPQ+   + +A+  S++SQ P+ TPAFR FIN I+E++++GLS+R+PWAE
Sbjct: 3   SSAPPVLPISNPQT---VPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAE 62

Query: 62  LADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSW 121
           LADR+A SKPES+S+A  RIRKNYSYF+VNYL V   I+GFSLV+HPFSL+ L+ LL+SW
Sbjct: 63  LADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASW 122

Query: 122 IFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAH 181
           +FLYLFRP+DQP+V+FGRTF D ETL  L+L S+FV+FLT VGSVLVSA+++GVAL+CAH
Sbjct: 123 LFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAH 182

Query: 182 GAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAV 219
           GAFR PEDLFLDEQ+  + GFLSF   AASSAA A +
Sbjct: 183 GAFRAPEDLFLDEQEPAATGFLSFLGGAASSAAPAVI 216

[Close]

BLAST of CmoCh14G000360 vs. ExPASy Swiss-Prot
Match: Q9LYN0 (PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.7e-65
Identity = 128/214 (59.81%), Postives = 168/214 (78.50%), Query Frame = 0


Query: 3   SSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAEL 62
           ++P  LP++N Q           ++QSQ P+ TPAFR F + +S S+R GLSQR+PW EL
Sbjct: 2   ATPPTLPVTNQQ-----------AVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTEL 61

Query: 63  ADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSWI 122
            DR++ ++PESL++A SRIRKN +YF+VNY+A+V+L+L FSL SHP SL++L+GLL  W+
Sbjct: 62  IDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWM 121

Query: 123 FLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAHG 182
           FLYLFRPSDQPLVVFGRTF D ETL+ LVL ++ VVF+TSVGS+L SAL++GVA+VC HG
Sbjct: 122 FLYLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHG 181

Query: 183 AFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAA 217
           AF VP+DLFLDEQ+  + G LSF   +A+SAAAA
Sbjct: 182 AFVVPDDLFLDEQEPANAGLLSFLGGSATSAAAA 204

[Close]

BLAST of CmoCh14G000360 vs. ExPASy Swiss-Prot
Match: Q9FLB6 (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.8e-64
Identity = 133/222 (59.91%), Postives = 169/222 (76.13%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           M ++P  LPIS+          SGG  QSQ PV+TPAFR F++ +S S+R  LSQR+PW 
Sbjct: 1   MMANPPTLPISD---------HSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWL 60

Query: 61  ELADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           EL DR+A S+PESL++A SRIR+N  YF+VNY+ +V+L+L  SL+SHPFSL++L+ L  +
Sbjct: 61  ELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCA 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           WIFLYLFRPSDQPLVV GRTF D ETL +LV+L++ VVFLTSVGS+L SAL++G  +VC 
Sbjct: 121 WIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCL 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAVPVAA 223
           HGAFRVPEDLFLD+Q+  + G LSF S AA+SAA AA    A
Sbjct: 181 HGAFRVPEDLFLDDQEPANTGLLSFLSGAATSAAVAAASTPA 213

[Close]

BLAST of CmoCh14G000360 vs. ExPASy Swiss-Prot
Match: Q9SIY7 (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.7e-64
Identity = 131/223 (58.74%), Postives = 178/223 (79.82%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           MSSSPAILP++N Q+          + QSQ P+ + AFR F++ +S SLR  LSQR+PW 
Sbjct: 1   MSSSPAILPVTNQQA----------ATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWL 60

Query: 61  ELADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           EL DR++F++P+SL+++ SRIRKN +YF+VNY A+V+L+L FSL+SHPFSL++L+ LL S
Sbjct: 61  ELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGS 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           W+FLYLFR SDQPLV+FGR+F D ETL+ LVL ++ VVF+TSVGS+L SAL +G+A+VC 
Sbjct: 121 WMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCL 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAVPVAAR 224
           HGAFRVP+DLFLDEQ+  + G LSF  ++A+++AAA+V VA R
Sbjct: 181 HGAFRVPDDLFLDEQEPANAGLLSFIGNSAATSAAASV-VAGR 212

[Close]

BLAST of CmoCh14G000360 vs. ExPASy Swiss-Prot
Match: Q9M012 (PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 6.1e-59
Identity = 128/230 (55.65%), Postives = 174/230 (75.65%), Query Frame = 0


Query: 1   MSSSPAILPIS-----NPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQ 60
           +S++P +LPIS         P I++A     ++SQ PV     R F+N ++E++  GLS+
Sbjct: 2   VSTNPPVLPISTTATDTTNQPPIVTAV----VESQPPVV----RAFVNGVTETVCGGLSR 61

Query: 61  RKPWAELADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLV 120
            +PW+EL DR+AF+KP+SLSEA +R RKN SYFRVNY+ +VALILGFSL++HPFSLILL+
Sbjct: 62  SRPWSELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLL 121

Query: 121 GLLSSWIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGV 180
            L +SW+FLYLFRPSD+PL++FGR+F + ETL  L+L ++ V+F TSVGSVL+SAL++G+
Sbjct: 122 CLAASWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGI 181

Query: 181 ALVCAHGAFRVPEDLFLDEQDNVSPGFLSFFS-----SAASSAAAAAVPV 221
           A +C HGAFR P+DLFLDEQD+ + GFLSF       S A SA++AA PV
Sbjct: 182 ATICVHGAFRAPDDLFLDEQDHAASGFLSFIGVPAIPSVAPSASSAASPV 223

[Close]

BLAST of CmoCh14G000360 vs. ExPASy TrEMBL
Match: A0A6J1F288 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111441519 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.5e-110
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA
Sbjct: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60

Query: 61  ELADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           ELADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS
Sbjct: 61  ELADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA
Sbjct: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAVPVAART 225
           HGAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAVPVAART
Sbjct: 181 HGAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAVPVAART 224

[Close]

BLAST of CmoCh14G000360 vs. ExPASy TrEMBL
Match: A0A6J1J1U7 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111481946 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 8.2e-107
Identity = 217/224 (96.88%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           MSSSPAILPISNPQS A+LSA SGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA
Sbjct: 1   MSSSPAILPISNPQSTAVLSATSGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60

Query: 61  ELADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           ELADRTAFSKPESLSEAT RIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILL+GLLSS
Sbjct: 61  ELADRTAFSKPESLSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLLGLLSS 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA
Sbjct: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAVPVAART 225
           HGAFRVPEDLFLDEQDNV+PGFLSFFSSAASSAAAAAVP AART
Sbjct: 181 HGAFRVPEDLFLDEQDNVTPGFLSFFSSAASSAAAAAVPAAART 224

[Close]

BLAST of CmoCh14G000360 vs. ExPASy TrEMBL
Match: A0A6J1DYL3 (PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111025780 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 7.4e-100
Identity = 201/224 (89.73%), Postives = 214/224 (95.54%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           MSSSPAILPISNPQS A ++AASGGS+QSQGPVTTPAFRVFINH+SESLRHGLSQR+PWA
Sbjct: 1   MSSSPAILPISNPQSTATVAAASGGSVQSQGPVTTPAFRVFINHLSESLRHGLSQRRPWA 60

Query: 61  ELADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           E+ADRTAFSKPESLSEAT RIRKNY+YFRVNYLAV+ALILGFSLVSHPFSLILL GLLSS
Sbjct: 61  EVADRTAFSKPESLSEATLRIRKNYTYFRVNYLAVIALILGFSLVSHPFSLILLAGLLSS 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           W+FLYLFRPSDQPLV+FGRTFKDSETLILLV LSVFVVFLTSVGSVLVSAL+VGVALVCA
Sbjct: 121 WLFLYLFRPSDQPLVLFGRTFKDSETLILLVCLSVFVVFLTSVGSVLVSALMVGVALVCA 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAVPVAART 225
           HGAFRVPEDLFLDEQ+ VS GFLSFFSSAAS+AAA  VPV ART
Sbjct: 181 HGAFRVPEDLFLDEQETVSTGFLSFFSSAASNAAAVGVPVTART 224

[Close]

BLAST of CmoCh14G000360 vs. ExPASy TrEMBL
Match: A0A0A0LF69 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_3G730850 PE=3 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.7e-99
Identity = 200/223 (89.69%), Postives = 212/223 (95.07%), Query Frame = 0


Query: 2   SSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAE 61
           SSSPAILPISNPQS  + +  SGGS+QSQGPVTTPAFR FINH+SE LRHGLSQR+PWAE
Sbjct: 3   SSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAE 62

Query: 62  LADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSW 121
           LADRTAFSKPES SEAT RIRKNYSYFRVNYLAV+ALILGFSLVSHPFSLILL GLLSSW
Sbjct: 63  LADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVIALILGFSLVSHPFSLILLAGLLSSW 122

Query: 122 IFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAH 181
           +FLYLFRPSDQPLV+FGRTFKDSETLILLV+LSVFVVFLTSVGSVLVSAL+VGVALVCAH
Sbjct: 123 LFLYLFRPSDQPLVLFGRTFKDSETLILLVVLSVFVVFLTSVGSVLVSALMVGVALVCAH 182

Query: 182 GAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAVPVAART 225
           GAFRVPEDLFLDEQ+NVS GFLSFFSSAAS+AAAAAVPVAART
Sbjct: 183 GAFRVPEDLFLDEQENVSTGFLSFFSSAASTAAAAAVPVAART 225

[Close]

BLAST of CmoCh14G000360 vs. ExPASy TrEMBL
Match: A0A5A7TRJ0 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00460 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.1e-98
Identity = 198/223 (88.79%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 2   SSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAE 61
           SSSPAILPISNPQS  + +  SGGS+QSQGPVTTPAFR FINH+SE LRHGLSQR+PWAE
Sbjct: 3   SSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAE 62

Query: 62  LADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSW 121
           LADRTAFSKPES SEAT RIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILL GLLSSW
Sbjct: 63  LADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLSSW 122

Query: 122 IFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAH 181
           +FLYLFRPSDQPLV+FGRTFKDSETLILLV+ SVFV+FLTSVGSVLVSAL+VGVALVCAH
Sbjct: 123 LFLYLFRPSDQPLVLFGRTFKDSETLILLVVFSVFVIFLTSVGSVLVSALMVGVALVCAH 182

Query: 182 GAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAVPVAART 225
           GAFRVPEDLFLDEQ+NVS GFLSFFSSAAS+AAAAA PVAART
Sbjct: 183 GAFRVPEDLFLDEQENVSTGFLSFFSSAASTAAAAAAPVAART 225

[Close]

BLAST of CmoCh14G000360 vs. TAIR 10
Match: AT2G38360.1 (prenylated RAB acceptor 1.B4 )

HSP 1 Score: 278.1 bits (710), Expect = 6.2e-75
Identity = 143/217 (65.90%), Postives = 182/217 (83.87%), Query Frame = 0


Query: 2   SSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAE 61
           SS+P +LPISNPQ+   + +A+  S++SQ P+ TPAFR FIN I+E++++GLS+R+PWAE
Sbjct: 3   SSAPPVLPISNPQT---VPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAE 62

Query: 62  LADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSW 121
           LADR+A SKPES+S+A  RIRKNYSYF+VNYL V   I+GFSLV+HPFSL+ L+ LL+SW
Sbjct: 63  LADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASW 122

Query: 122 IFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAH 181
           +FLYLFRP+DQP+V+FGRTF D ETL  L+L S+FV+FLT VGSVLVSA+++GVAL+CAH
Sbjct: 123 LFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAH 182

Query: 182 GAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAV 219
           GAFR PEDLFLDEQ+  + GFLSF   AASSAA A +
Sbjct: 183 GAFRAPEDLFLDEQEPAATGFLSFLGGAASSAAPAVI 216

[Close]

BLAST of CmoCh14G000360 vs. TAIR 10
Match: AT3G56110.1 (prenylated RAB acceptor 1.B1 )

HSP 1 Score: 248.8 bits (634), Expect = 4.0e-66
Identity = 128/214 (59.81%), Postives = 168/214 (78.50%), Query Frame = 0


Query: 3   SSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAEL 62
           ++P  LP++N Q           ++QSQ P+ TPAFR F + +S S+R GLSQR+PW EL
Sbjct: 2   ATPPTLPVTNQQ-----------AVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTEL 61

Query: 63  ADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSWI 122
            DR++ ++PESL++A SRIRKN +YF+VNY+A+V+L+L FSL SHP SL++L+GLL  W+
Sbjct: 62  IDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWM 121

Query: 123 FLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAHG 182
           FLYLFRPSDQPLVVFGRTF D ETL+ LVL ++ VVF+TSVGS+L SAL++GVA+VC HG
Sbjct: 122 FLYLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHG 181

Query: 183 AFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAA 217
           AF VP+DLFLDEQ+  + G LSF   +A+SAAAA
Sbjct: 182 AFVVPDDLFLDEQEPANAGLLSFLGGSATSAAAA 204

[Close]

BLAST of CmoCh14G000360 vs. TAIR 10
Match: AT3G56110.2 (prenylated RAB acceptor 1.B1 )

HSP 1 Score: 248.8 bits (634), Expect = 4.0e-66
Identity = 128/214 (59.81%), Postives = 168/214 (78.50%), Query Frame = 0


Query: 3   SSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWAEL 62
           ++P  LP++N Q           ++QSQ P+ TPAFR F + +S S+R GLSQR+PW EL
Sbjct: 2   ATPPTLPVTNQQ-----------AVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTEL 61

Query: 63  ADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSSWI 122
            DR++ ++PESL++A SRIRKN +YF+VNY+A+V+L+L FSL SHP SL++L+GLL  W+
Sbjct: 62  IDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWM 121

Query: 123 FLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCAHG 182
           FLYLFRPSDQPLVVFGRTF D ETL+ LVL ++ VVF+TSVGS+L SAL++GVA+VC HG
Sbjct: 122 FLYLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHG 181

Query: 183 AFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAA 217
           AF VP+DLFLDEQ+  + G LSF   +A+SAAAA
Sbjct: 182 AFVVPDDLFLDEQEPANAGLLSFLGGSATSAAAA 204

[Close]

BLAST of CmoCh14G000360 vs. TAIR 10
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3 )

HSP 1 Score: 246.5 bits (628), Expect = 2.0e-65
Identity = 133/222 (59.91%), Postives = 169/222 (76.13%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           M ++P  LPIS+          SGG  QSQ PV+TPAFR F++ +S S+R  LSQR+PW 
Sbjct: 1   MMANPPTLPISD---------HSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWL 60

Query: 61  ELADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           EL DR+A S+PESL++A SRIR+N  YF+VNY+ +V+L+L  SL+SHPFSL++L+ L  +
Sbjct: 61  ELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCA 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           WIFLYLFRPSDQPLVV GRTF D ETL +LV+L++ VVFLTSVGS+L SAL++G  +VC 
Sbjct: 121 WIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCL 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAVPVAA 223
           HGAFRVPEDLFLD+Q+  + G LSF S AA+SAA AA    A
Sbjct: 181 HGAFRVPEDLFLDDQEPANTGLLSFLSGAATSAAVAAASTPA 213

[Close]

BLAST of CmoCh14G000360 vs. TAIR 10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2 )

HSP 1 Score: 246.1 bits (627), Expect = 2.6e-65
Identity = 131/223 (58.74%), Postives = 178/223 (79.82%), Query Frame = 0


Query: 1   MSSSPAILPISNPQSPAILSAASGGSLQSQGPVTTPAFRVFINHISESLRHGLSQRKPWA 60
           MSSSPAILP++N Q+          + QSQ P+ + AFR F++ +S SLR  LSQR+PW 
Sbjct: 1   MSSSPAILPVTNQQA----------ATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWL 60

Query: 61  ELADRTAFSKPESLSEATSRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLVGLLSS 120
           EL DR++F++P+SL+++ SRIRKN +YF+VNY A+V+L+L FSL+SHPFSL++L+ LL S
Sbjct: 61  ELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGS 120

Query: 121 WIFLYLFRPSDQPLVVFGRTFKDSETLILLVLLSVFVVFLTSVGSVLVSALLVGVALVCA 180
           W+FLYLFR SDQPLV+FGR+F D ETL+ LVL ++ VVF+TSVGS+L SAL +G+A+VC 
Sbjct: 121 WMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCL 180

Query: 181 HGAFRVPEDLFLDEQDNVSPGFLSFFSSAASSAAAAAVPVAAR 224
           HGAFRVP+DLFLDEQ+  + G LSF  ++A+++AAA+V VA R
Sbjct: 181 HGAFRVPDDLFLDEQEPANAGLLSFIGNSAATSAAASV-VAGR 212

The following BLAST results are available for this feature:

BLAST of CmoCh14G000360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80915	8.8e-74	65.90	PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1	[more]
Q9LYN0	5.7e-65	59.81	PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1	[more]
Q9FLB6	2.8e-64	59.91	PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1	[more]
Q9SIY7	3.7e-64	58.74	PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1	[more]
Q9M012	6.1e-59	55.65	PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1	[more]

BLAST of CmoCh14G000360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F288	3.5e-110	100.00	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111441519 PE=3 SV=1	[more]
A0A6J1J1U7	8.2e-107	96.88	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111481946 PE=3 SV=1	[more]
A0A6J1DYL3	7.4e-100	89.73	PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111025780 PE=3 SV=1	[more]
A0A0A0LF69	3.7e-99	89.69	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_3G730850 PE=3 SV=1	[more]
A0A5A7TRJ0	3.1e-98	88.79	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G...	[more]

BLAST of CmoCh14G000360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38360.1	6.2e-75	65.90	prenylated RAB acceptor 1.B4	[more]
AT3G56110.1	4.0e-66	59.81	prenylated RAB acceptor 1.B1	[more]
AT3G56110.2	4.0e-66	59.81	prenylated RAB acceptor 1.B1	[more]
AT5G05380.1	2.0e-65	59.91	prenylated RAB acceptor 1.B3	[more]
AT2G40380.1	2.6e-65	58.74	prenylated RAB acceptor 1.B2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 53..195 e-value: 1.2E-48 score: 164.4
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 2..222
None	No IPR available	PANTHER	PTHR19317:SF34	PRA1 FAMILY PROTEIN-RELATED	coord: 2..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G000360.1	CmoCh14G000360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane