CmoCh14G000110 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G000110
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	pentatricopeptide repeat-containing protein At1g09900-like
Location	Cmo_Chr14: 67122 .. 69381 (+)
RNA-Seq Expression	CmoCh14G000110
Synteny	CmoCh14G000110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTGGTTAAGAAATTTGGGGACGAACACAGCAACTTGTTGGACCAATACGAGAGACGGAGCTTTGAGGCGCGACTAAACCAAGCGATTCTGGGGCGGAGTCTTTCGGATCCGAGGACGTTGAGGTCTCAACAGCAGCCGCAGCCGCAACTTAGTGCCTCAGGCTCAGTTCGGCTACCATGCTTGGTAACAAGTAGCAATCAGCCCAGAAAAGGAGGCCGTGGATCCACATTCAACTTCAACAAGATTATCAATAAGTTACTCAAACCCATTTTGGGGAGAAAGAGTAAGAGTAGGGCAAAGAAGGAACTTCCAGATTTCAGAAACCCCGTGTCTTGGAAAGCCCTCAGTAAATCCATGCGCCTTTGATCTTTTTTCAATGCTGTCAATCTGCGTCCCCTTGCTTTCCTTGTCTATTTTCTTACATCGGAACAGGATACTCCAATGTCAATCAATCAACAGATTCAGTGATTTTCATTTGTAGTTGAAGTAATTAACATTCGGATAATTATTCTGTTGTCTTTTCTTTATTAAATTATTTTAACCAACTTTCTCCTTCAAGATTTTGGGCTGTTCTTGCTATCAATGCCATGGAGCGGACTGGGCTCAAGTCAAGTCACTCGAGGCCCAAACAACTTCGTTCTCCAATCTCCCAATTTCTGGAGATACAGACCAAACCCAATTTCACCCTGCCGTGCCCTCCACCAACTTCAGCTTCCCATCCAATCATCTCTGCAAAAACCAATCTTTCCTTCCATAGAAATCCCAACATAAACGAATGCGTATCGCCCTTCGCCCGTCTTTCCTCACAACTCTTCCGCTCTCTTCTACAGATACGCCTTTCGGTGCCAACTTTATCGAAGAAAATGGTAGGCTTAGCGCGAATAAACGACCCCATTCCGTCTGTAATGGCGGGCTTAGTTTCAATCACCATGTTCACGGCTCACCTTTCAAACTGGGGATTCAGATCCCCACTAGAATGACCATTCAAAATGTTGCCGACACAATTAAATCACTGCCAATACCGTCGGAAGAAGGGACTGAAATTTTCATCATGTCTCAGAAAAGTTGTGAGATTCAAAACATATGTGAATTCAATGACCTGTTCATGGAATTCGTCTCAGAAGATGAGCTCGATCTTGCCCTAAAACTGTTGTCCAATTTATCATCTTACGGTTTGGTCCCAAATTGTAGAACATTTTCCATCATGATAAGGTGCTATTGCAAGAAAGGAGATTTAGAAAATGCGGCTAGGGTTTTAGGCCAAATGCTGGGAAGGGGTTGTAATCCAAACGATGCAACCATCACAGTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAATGCAGAAAGCTTTAGAAATGGTCGAGCTCGTGGGAAGGAATGGACGCAAGCCAACCGTTCAGGCATACAATTGTTTGTTGAAAGGGCTATGTTACGTTGGGAGAGTGGAAGAGGCATGCGAAATGGTGACGGAAATGAAGAAGGATAGCTTGATACCTGATATTTACACGTACACGGCTCTTATGGATGGCTTGTGTAAGGTAGGCCGATCAGACGAGGCAATGGAATTGCTCAGTGAAGCTGAGCAAAATGGTGTTAAACCAAGTGTAGTTACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGGCCACTGGATGGGATCCGTGTGTTGAAGAAAATGAAGCAAATGAACTGTACGCCGGATCGCATTAGTTATAGCACTCTGCTGCAGGGGCTGATAAAATGGGGTAAAATCCGAACAGCCTTGAGGACATACAAGGAAATGGTTAGCTCAGGCCACAGCATCGAAGAAAAAATGATGAATACCTTCATGAGAGCGTTATGCAGGAGAACCTGGAAAGAAAAGGACCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAGAACGAATTGCAAGTTATTGATCGGAGTACATATGGCCTGCTGATCCAAGCACTCTGTTCAGGAAACAGGACTTCTGAGGCTTTGGCAAATTTGCATCATATGATTGGAAAAGGGTACTCTCCAAGGGCGATTACCATCGACGTTATGGTTCAAGCGCTTTGTCACAGCGGAGGCGCCAGTGAAGCATTGTGTGTCTTGGGGCATGGAATCCGTTTCAGCAGAATTTCCTTTGACCTGGTTATCGAGGAGCTAAATGAAGAAGGAATGTGGTTTAGTGCTTGTAACGTATATGGCCTGGCTTTGAAACGAGGTATTAAACCCACGAAGAGGCCTCGGTGA

mRNA sequence

ATGGCAGTGGTTAAGAAATTTGGGGACGAACACAGCAACTTGTTGGACCAATACGAGAGACGGAGCTTTGAGGCGCGACTAAACCAAGCGATTCTGGGGCGGAGTCTTTCGGATCCGAGGACGTTGAGGTCTCAACAGCAGCCGCAGCCGCAACTTAGTGCCTCAGGCTCAGTTCGGCTACCATGCTTGGTAACAAGTAGCAATCAGCCCAGAAAAGGAGGCCGTGGATCCACATTCAACTTCAACAAGATTATCAATAAGTTACTCAAACCCATTTTGGGGAGAAAGAGTAAGAGTAGGGCAAAGAAGGAACTTCCAGATTTCAGAAACCCCGTGTCTTGGAAAGCCCTCAGATACTCCAATGTCAATCAATCAACAGATTCAAAATCCCAACATAAACGAATGCGTATCGCCCTTCGCCCGTCTTTCCTCACAACTCTTCCGCTCTCTTCTACAGATACGCCTTTCGGTGCCAACTTTATCGAAGAAAATGGTAGGCTTAGCGCGAATAAACGACCCCATTCCGTCTGTAATGGCGGGCTTAGTTTCAATCACCATGTTCACGGCTCACCTTTCAAACTGGGGATTCAGATCCCCACTAGAATGACCATTCAAAATGTTGCCGACACAATTAAATCACTGCCAATACCGTCGGAAGAAGGGACTGAAATTTTCATCATGTCTCAGAAAAGTTGTGAGATTCAAAACATATGTGAATTCAATGACCTGTTCATGGAATTCGTCTCAGAAGATGAGCTCGATCTTGCCCTAAAACTGTTGTCCAATTTATCATCTTACGGTTTGGTCCCAAATTGTAGAACATTTTCCATCATGATAAGGTGCTATTGCAAGAAAGGAGATTTAGAAAATGCGGCTAGGGTTTTAGGCCAAATGCTGGGAAGGGGTTGTAATCCAAACGATGCAACCATCACAGTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAATGCAGAAAGCTTTAGAAATGGTCGAGCTCGTGGGAAGGAATGGACGCAAGCCAACCGTTCAGGCATACAATTGTTTGTTGAAAGGGCTATGTTACGTTGGGAGAGTGGAAGAGGCATGCGAAATGGTGACGGAAATGAAGAAGGATAGCTTGATACCTGATATTTACACGTACACGGCTCTTATGGATGGCTTGTGTAAGGTAGGCCGATCAGACGAGGCAATGGAATTGCTCAGTGAAGCTGAGCAAAATGGTGTTAAACCAAGTGTAGTTACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGGCCACTGGATGGGATCCGTGTGTTGAAGAAAATGAAGCAAATGAACTGTACGCCGGATCGCATTAGTTATAGCACTCTGCTGCAGGGGCTGATAAAATGGGGTAAAATCCGAACAGCCTTGAGGACATACAAGGAAATGGTTAGCTCAGGCCACAGCATCGAAGAAAAAATGATGAATACCTTCATGAGAGCGTTATGCAGGAGAACCTGGAAAGAAAAGGACCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAGAACGAATTGCAAGTTATTGATCGGAGTACATATGGCCTGCTGATCCAAGCACTCTGTTCAGGAAACAGGACTTCTGAGGCTTTGGCAAATTTGCATCATATGATTGGAAAAGGGTACTCTCCAAGGGCGATTACCATCGACGTTATGGTTCAAGCGCTTTGTCACAGCGGAGGCGCCAGTGAAGCATTGTGTGTCTTGGGGCATGGAATCCGTTTCAGCAGAATTTCCTTTGACCTGGTTATCGAGGAGCTAAATGAAGAAGGAATGTGGTTTAGTGCTTGTAACGTATATGGCCTGGCTTTGAAACGAGGTATTAAACCCACGAAGAGGCCTCGGTGA

Coding sequence (CDS)

ATGGCAGTGGTTAAGAAATTTGGGGACGAACACAGCAACTTGTTGGACCAATACGAGAGACGGAGCTTTGAGGCGCGACTAAACCAAGCGATTCTGGGGCGGAGTCTTTCGGATCCGAGGACGTTGAGGTCTCAACAGCAGCCGCAGCCGCAACTTAGTGCCTCAGGCTCAGTTCGGCTACCATGCTTGGTAACAAGTAGCAATCAGCCCAGAAAAGGAGGCCGTGGATCCACATTCAACTTCAACAAGATTATCAATAAGTTACTCAAACCCATTTTGGGGAGAAAGAGTAAGAGTAGGGCAAAGAAGGAACTTCCAGATTTCAGAAACCCCGTGTCTTGGAAAGCCCTCAGATACTCCAATGTCAATCAATCAACAGATTCAAAATCCCAACATAAACGAATGCGTATCGCCCTTCGCCCGTCTTTCCTCACAACTCTTCCGCTCTCTTCTACAGATACGCCTTTCGGTGCCAACTTTATCGAAGAAAATGGTAGGCTTAGCGCGAATAAACGACCCCATTCCGTCTGTAATGGCGGGCTTAGTTTCAATCACCATGTTCACGGCTCACCTTTCAAACTGGGGATTCAGATCCCCACTAGAATGACCATTCAAAATGTTGCCGACACAATTAAATCACTGCCAATACCGTCGGAAGAAGGGACTGAAATTTTCATCATGTCTCAGAAAAGTTGTGAGATTCAAAACATATGTGAATTCAATGACCTGTTCATGGAATTCGTCTCAGAAGATGAGCTCGATCTTGCCCTAAAACTGTTGTCCAATTTATCATCTTACGGTTTGGTCCCAAATTGTAGAACATTTTCCATCATGATAAGGTGCTATTGCAAGAAAGGAGATTTAGAAAATGCGGCTAGGGTTTTAGGCCAAATGCTGGGAAGGGGTTGTAATCCAAACGATGCAACCATCACAGTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAATGCAGAAAGCTTTAGAAATGGTCGAGCTCGTGGGAAGGAATGGACGCAAGCCAACCGTTCAGGCATACAATTGTTTGTTGAAAGGGCTATGTTACGTTGGGAGAGTGGAAGAGGCATGCGAAATGGTGACGGAAATGAAGAAGGATAGCTTGATACCTGATATTTACACGTACACGGCTCTTATGGATGGCTTGTGTAAGGTAGGCCGATCAGACGAGGCAATGGAATTGCTCAGTGAAGCTGAGCAAAATGGTGTTAAACCAAGTGTAGTTACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGGCCACTGGATGGGATCCGTGTGTTGAAGAAAATGAAGCAAATGAACTGTACGCCGGATCGCATTAGTTATAGCACTCTGCTGCAGGGGCTGATAAAATGGGGTAAAATCCGAACAGCCTTGAGGACATACAAGGAAATGGTTAGCTCAGGCCACAGCATCGAAGAAAAAATGATGAATACCTTCATGAGAGCGTTATGCAGGAGAACCTGGAAAGAAAAGGACCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAGAACGAATTGCAAGTTATTGATCGGAGTACATATGGCCTGCTGATCCAAGCACTCTGTTCAGGAAACAGGACTTCTGAGGCTTTGGCAAATTTGCATCATATGATTGGAAAAGGGTACTCTCCAAGGGCGATTACCATCGACGTTATGGTTCAAGCGCTTTGTCACAGCGGAGGCGCCAGTGAAGCATTGTGTGTCTTGGGGCATGGAATCCGTTTCAGCAGAATTTCCTTTGACCTGGTTATCGAGGAGCTAAATGAAGAAGGAATGTGGTTTAGTGCTTGTAACGTATATGGCCTGGCTTTGAAACGAGGTATTAAACCCACGAAGAGGCCTCGGTGA

Protein sequence

MAVVKKFGDEHSNLLDQYERRSFEARLNQAILGRSLSDPRTLRSQQQPQPQLSASGSVRLPCLVTSSNQPRKGGRGSTFNFNKIINKLLKPILGRKSKSRAKKELPDFRNPVSWKALRYSNVNQSTDSKSQHKRMRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKLGIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNVYGLALKRGIKPTKRPR

Homology

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BLAST of CmoCh14G000110 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 4.2e-49
Identity = 108/346 (31.21%), Postives = 181/346 (52.31%), Query Frame = 0


Query: 240 FNDLFMEFVSEDELDLALKLLSNL-SSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQM 299
           FN L   FV+   LD A  +LS++ +SYG+VP+  T++ +I  Y K+G +  A  VL  M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415

Query: 300 LGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRV 359
             +GC PN  + T+LV+ FCK GK+ +A  ++  +  +G KP    +NCL+   C   R+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475

Query: 360 EEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTL 419
            EA E+  EM +    PD+YT+ +L+ GLC+V     A+ LL +    GV  + VT+NTL
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535

Query: 420 FNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGH 479
            N + + G   +  +++ +M       D I+Y++L++GL + G++  A   +++M+  GH
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595

Query: 480 SIEEKMMNTFMRALCRRTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRT 539
           +      N  +  LCR       ++E+A +  ++M       D  T+  LI  LC   R 
Sbjct: 596 APSNISCNILINGLCR-----SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 655

Query: 540 SEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALCVLGHGI 585
            + L     +  +G  P  +T + ++  LC  G   +A  +L  GI
Sbjct: 656 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI 696

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BLAST of CmoCh14G000110 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.2e-49
Identity = 109/344 (31.69%), Postives = 187/344 (54.36%), Query Frame = 0


Query: 236 NICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVL 295
           ++  FN L        +L  A+ +L ++ SYGLVP+ +TF+ +++ Y ++GDL+ A R+ 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247

Query: 296 GQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMV-ELVGRNGRKPTVQAYNCLLKGLCY 355
            QM+  GC+ ++ ++ V+V+ FCK G+++ AL  + E+  ++G  P    +N L+ GLC 
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307

Query: 356 VGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVT 415
            G V+ A E++  M ++   PD+YTY +++ GLCK+G   EA+E+L +       P+ VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367

Query: 416 FNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMV 475
           +NTL +  CKE +  +   + + +      PD  ++++L+QGL      R A+  ++EM 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 476 SSGHSIEEKMMNTFMRALCRRTWKEKDLLEDAHQVFEKMKNELQVIDRS--TYGLLIQAL 535
           S G   +E   N  + +LC      K  L++A  + ++M  EL    RS  TY  LI   
Sbjct: 428 SKGCEPDEFTYNMLIDSLC-----SKGKLDEALNMLKQM--ELSGCARSVITYNTLIDGF 487

Query: 536 CSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEA 577
           C  N+T EA      M   G S  ++T + ++  LC S    +A
Sbjct: 488 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524

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BLAST of CmoCh14G000110 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.6e-48
Identity = 111/350 (31.71%), Postives = 179/350 (51.14%), Query Frame = 0


Query: 227 MSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKG 286
           M  K C + N+  +N L   +    ++D   KLL +++  GL PN  +++++I   C++G
Sbjct: 231 METKGC-LPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 290

Query: 287 DLENAARVLGQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGRNGRKPTVQAYN 346
            ++  + VL +M  RG + ++ T   L+  +CK G   +AL M   + R+G  P+V  Y 
Sbjct: 291 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 350

Query: 347 CLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQN 406
            L+  +C  G +  A E + +M+   L P+  TYT L+DG  + G  +EA  +L E   N
Sbjct: 351 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 410

Query: 407 GVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTA 466
           G  PSVVT+N L NG+C  G+  D I VL+ MK+   +PD +SYST+L G  +   +  A
Sbjct: 411 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 470

Query: 467 LRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLLEDAHQVFEKMKNELQVIDRSTYG 526
           LR  +EMV  G   +    ++ ++  C     E+   ++A  ++E+M       D  TY 
Sbjct: 471 LRVKREMVEKGIKPDTITYSSLIQGFC-----EQRRTKEACDLYEEMLRVGLPPDEFTYT 530

Query: 527 LLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEA 577
            LI A C      +AL   + M+ KG  P  +T  V++  L       EA
Sbjct: 531 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574

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BLAST of CmoCh14G000110 vs. ExPASy Swiss-Prot
Match: Q3ECK2 (Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62680 PE=2 SV=2)

HSP 1 Score: 193.4 bits (490), Expect = 7.9e-48
Identity = 114/410 (27.80%), Postives = 203/410 (49.51%), Query Frame = 0


Query: 216 IPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTF 275
           I   +  ++F    KS    +I +FN L    V   + D+ + L   +   G+  +  TF
Sbjct: 64  IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 276 SIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGR 335
           +I+I C+C    +  A  +LG+ML  G  P+  TI  LVN FC+R ++  A+ +V+ +  
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183

Query: 336 NGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDE 395
            G KP + AYN ++  LC   RV +A +   E+++  + P++ TYTAL++GLC   R  +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 396 AMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQ 455
           A  LLS+  +  + P+V+T++ L + + K G+ L+   + ++M +M+  PD ++YS+L+ 
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303

Query: 456 GLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLLEDAHQVFEKMKN 515
           GL    +I  A + +  MVS G   +    NT +   C+        +ED  ++F +M  
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK-----AKRVEDGMKLFREMSQ 363

Query: 516 ELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASE 575
              V +  TY  LIQ         +A      M   G SP   T ++++  LC +G   +
Sbjct: 364 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 423

Query: 576 ALCVL----GHGIRFSRISFDLVIEELNEEGMWFSACNVYGLALKRGIKP 622
           AL +        +    +++  VI  + + G    A +++     +G+KP
Sbjct: 424 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468

[Close]

BLAST of CmoCh14G000110 vs. ExPASy Swiss-Prot
Match: P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 3.0e-47
Identity = 110/400 (27.50%), Postives = 199/400 (49.75%), Query Frame = 0


Query: 216 IPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTF 275
           I  ++   +F    +S  + ++ +F+  F       + +L L     L   G+  N  T 
Sbjct: 67  IKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126

Query: 276 SIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGR 335
           +IMI C+C+      A  VLG+++  G  P+  T   L+      GK+ +A+ +V+ +  
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186

Query: 336 NGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDE 395
           NG +P V  YN ++ G+C  G    A +++ +M++ ++  D++TY+ ++D LC+ G  D 
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246

Query: 396 AMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQ 455
           A+ L  E E  G+K SVVT+N+L  G CK G+  DG  +LK M      P+ I+++ LL 
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306

Query: 456 GLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLLEDAHQVFEKMKN 515
             +K GK++ A   YKEM++ G S      NT M   C      ++ L +A+ + + M  
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM-----QNRLSEANNMLDLMVR 366

Query: 516 ELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSG--GA 575
                D  T+  LI+  C   R  + +    ++  +G    A+T  ++VQ  C SG    
Sbjct: 367 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 426

Query: 576 SEALC--VLGHGIRFSRISFDLVIEELNEEGMWFSACNVY 612
           +E L   ++ HG+    +++ ++++ L + G    A  ++
Sbjct: 427 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

[Close]

BLAST of CmoCh14G000110 vs. ExPASy TrEMBL
Match: A0A6J1F9P1 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111442091 PE=4 SV=1)

HSP 1 Score: 1001.9 bits (2589), Expect = 1.2e-288
Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 0


Query: 135 MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKL 194
           MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKL
Sbjct: 1   MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKL 60

Query: 195 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 254
           GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 255 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 314
           LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180

Query: 315 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 374
           NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 375 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 434
           PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 435 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 494
           LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 495 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 554
           RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 555 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNVYGLA 614
           PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNVYGLA
Sbjct: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNVYGLA 480

Query: 615 LKRGIKPTKRPR 627
           LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492

[Close]

BLAST of CmoCh14G000110 vs. ExPASy TrEMBL
Match: A0A6J1J506 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111481420 PE=4 SV=1)

HSP 1 Score: 965.3 bits (2494), Expect = 1.2e-277
Identity = 474/492 (96.34%), Postives = 479/492 (97.36%), Query Frame = 0


Query: 135 MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKL 194
           MR+ALRPSFLTTLPLSSTDTPFGANFIE N R SANKRPHSVCNGG SFNHHVH SPFKL
Sbjct: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEANDRRSANKRPHSVCNGGFSFNHHVHASPFKL 60

Query: 195 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 254
           GIQIPTRMTIQNVAD IKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61  GIQIPTRMTIQNVADRIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 255 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 314
           LALKLLSNL+SYGLVPN RTFSIMIRCYCKKGDL+NAARVLGQMLGRGCNPNDATITVLV
Sbjct: 121 LALKLLSNLTSYGLVPNSRTFSIMIRCYCKKGDLDNAARVLGQMLGRGCNPNDATITVLV 180

Query: 315 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 374
           NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 375 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 434
           PDIYTYTALMDGLCKVGRSDEAMELLSEAE NGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEGNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 435 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 494
           LKKMKQMNCTPDRISYSTLL GLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 495 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 554
           RTWKEKDLLEDAHQVFEKMKNE QVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNEFQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 555 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNVYGLA 614
           P AITIDVMVQALCHSG ASEALCVLGHGIRFSRISFDL+IEELNEEGMW SAC+VYGLA
Sbjct: 421 PWAITIDVMVQALCHSGSASEALCVLGHGIRFSRISFDLIIEELNEEGMWLSACSVYGLA 480

Query: 615 LKRGIKPTKRPR 627
           LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492

[Close]

BLAST of CmoCh14G000110 vs. ExPASy TrEMBL
Match: A0A6J1DW66 (pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charantia OX=3673 GN=LOC111024057 PE=4 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 1.1e-214
Identity = 374/490 (76.33%), Postives = 420/490 (85.71%), Query Frame = 0


Query: 147 LPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSF-NHHVHGSPFKLGIQIPTRMTIQ 206
           LPLSST      NFIEENGRLS NK+ HS  N G  F   +V+  PFKL I+ P R+T++
Sbjct: 9   LPLSST----SVNFIEENGRLSPNKQSHSNRNRGPGFGGDNVYALPFKLEIENPRRITVK 68

Query: 207 NVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSS 266
           N A  I SLP PS+EGTE+FI SQK CEIQNI EFNDLF +FVS +ELDLAL+LLSN+SS
Sbjct: 69  NEAGRIGSLPTPSKEGTEMFITSQKDCEIQNISEFNDLFADFVSAEELDLALRLLSNISS 128

Query: 267 YGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLVNAFCKRGKMQK 326
           YGLVPN RTFSI IRCYCKKGDL+NA RV  QMLG GCNPNDAT+TVLVNA C+RGK+++
Sbjct: 129 YGLVPNSRTFSIAIRCYCKKGDLDNAKRVFDQMLGSGCNPNDATVTVLVNALCRRGKIKR 188

Query: 327 ALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMD 386
           ALEMVELVGR GRK TV+ YNCLLKGLCYVGRVEEACEMV +MKKD L+PDIYTYTALMD
Sbjct: 189 ALEMVELVGRIGRKQTVRTYNCLLKGLCYVGRVEEACEMVAKMKKDGLVPDIYTYTALMD 248

Query: 387 GLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTP 446
           GLCKVGRSDEAMELL+EAE+NG++PSVVTFNTLFNGYCKEGRPLDGI VLKKMKQMNC P
Sbjct: 249 GLCKVGRSDEAMELLNEAEENGLEPSVVTFNTLFNGYCKEGRPLDGIHVLKKMKQMNCMP 308

Query: 447 DRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLLED 506
           DRISY+TLL GLIKWGKIRTALRTYKEMVSSGHS+EEKMMNTFMRALCRR+WKEKDLLED
Sbjct: 309 DRISYTTLLHGLIKWGKIRTALRTYKEMVSSGHSVEEKMMNTFMRALCRRSWKEKDLLED 368

Query: 507 AHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQ 566
           AHQVFEKMKNE QVI RSTYG++I ALCSGN+ SEA+ANLHHMI KGYSPRAITI+V+V+
Sbjct: 369 AHQVFEKMKNEFQVIHRSTYGVVIPALCSGNKISEAVANLHHMIRKGYSPRAITINVVVE 428

Query: 567 ALCHSGGASEALCVLG---------HGIRFSRISFDLVIEELNEEGMWFSACNVYGLALK 626
           ALC  G  +EAL V+G         H I FSR+S+DL+I+ELN++GMWF AC VYGLALK
Sbjct: 429 ALCRRGSTNEALGVVGLGLVGDGHHHVIPFSRVSYDLIIDELNKQGMWFDACKVYGLALK 488

[Close]

BLAST of CmoCh14G000110 vs. ExPASy TrEMBL
Match: A0A6J5VAX5 (PPR_long domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS40612 PE=3 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 1.0e-151
Identity = 304/642 (47.35%), Postives = 408/642 (63.55%), Query Frame = 0


Query: 2   AVVKKFGDEHSNLLDQYERRSFEARLNQAILGRSLSDPRTLRSQQQPQPQLSASGSVRLP 61
           A+++ FGD+ S+LLD +ER S E +LNQA+L RSLS+P  +RSQQ             L 
Sbjct: 10  AILRTFGDDKSSLLDHFERLSVELKLNQAMLRRSLSEPTQIRSQQP-----------LLI 69

Query: 62  CLVTSSNQP------RKGGRGSTFNFNKIINKLLKPILGRKSKSRAKKELPDFRNPVSWK 121
           C   S ++P       K  RGS   F+K++ K++KPIL R S    KKE+PD ++P    
Sbjct: 70  CQAPSESEPPPPPLVTKKRRGS--GFSKVLKKMIKPILSRMSAK--KKEIPDAKDP---- 129

Query: 122 ALRYSNVNQSTDSKSQHKRMRI-------ALRPSFLTTLPLSSTDTPFGANFIEENGRLS 181
                   ++ + ++QH ++ +       A  P+  T L + S       ++ ++ G  S
Sbjct: 130 --------RTHNKRTQHGKLLVFAALSCSATNPTGTTPLNVVSLADKTHQSYPKDYGLQS 189

Query: 182 ANKRPHSVCNGGLSFNHHVHGSPFKLGIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMS 241
           + + P       L F+             I +R+ +Q   D IK+LP   E    + I  
Sbjct: 190 SIEEPK------LDFD------------SIASRLQVQRFIDRIKALPF-RETSVILGIFE 249

Query: 242 QKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDL 301
           Q  C  Q + EFN L M  V   E D+AL L + +S+YGLVP+  TFSIMIRCYC+K DL
Sbjct: 250 QDGC-FQTVSEFNALLMALVIAKEPDIALSLFNEVSAYGLVPDSLTFSIMIRCYCEKNDL 309

Query: 302 ENAARVLGQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCL 361
           + A RVL  M+  G  PN ATITVL+N+ CKRG++Q+ALE++E++GR G KPTVQ YNCL
Sbjct: 310 DEAIRVLVHMVENGFYPNAATITVLINSLCKRGRLQRALEVLEVMGRIGCKPTVQIYNCL 369

Query: 362 LKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGV 421
           LKGLCYVGRVE+A EM+  +KKD++ PDIYT+TA+MDG CKVGRSDEAMELL EA + G+
Sbjct: 370 LKGLCYVGRVEDAYEMLMRIKKDAIKPDIYTFTAVMDGFCKVGRSDEAMELLDEAVEMGL 429

Query: 422 KPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALR 481
            P VVTFNTLFNGYCKEGRP++G+ VLK+MK+ NC PD I+YSTLL GL+KWGK R ALR
Sbjct: 430 TPDVVTFNTLFNGYCKEGRPMEGLNVLKQMKERNCNPDCITYSTLLHGLLKWGKTRNALR 489

Query: 482 TYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLL 541
            YKEMV +G  ++ ++MN  +R LCRR+ KEKDLLEDAH+VFEKM+NE+  ID STYGL+
Sbjct: 490 VYKEMVENGVEVDGRLMNNLVRGLCRRSRKEKDLLEDAHEVFEKMQNEVLGIDASTYGLM 549

Query: 542 IQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALCVLG----HGI 601
           IQ LC   +   A+  L  MIG GYSP  IT + +++ LC  G  +EAL VL      G 
Sbjct: 550 IQTLCMEKKMDAAVVCLQEMIGMGYSPWIITFNNVIKTLCVEGKVTEALLVLSIMYEGGR 604

Query: 602 RFSRISFDLVIEELNEEGMWFSACNVYGLALKRGIKPTKRPR 627
             + IS++ +I  LN  G +   C+VYG A+KRG+ P  +P+
Sbjct: 610 GTNGISYNPLIHGLNRRGSFLGGCSVYGAAVKRGVIPNTKPQ 604

[Close]

BLAST of CmoCh14G000110 vs. ExPASy TrEMBL
Match: A0A6J5V7D1 (PPR_long domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS40610 PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 9.8e-150
Identity = 302/634 (47.63%), Postives = 403/634 (63.56%), Query Frame = 0


Query: 2   AVVKKFGDEHSNLLDQYERRSFEARLNQAILGRSLSDPRTLRSQQQPQPQLSASGSVRLP 61
           A+++ FGD+ S+LLD +ER S E +LNQA+L RSLS+P  +RSQQ             L 
Sbjct: 19  AILRTFGDDKSSLLDHFERLSVELKLNQAMLRRSLSEPTQIRSQQP-----------LLI 78

Query: 62  CLVTSSNQP------RKGGRGSTFNFNKIINKLLKPILGRKSKSRAKKELPDFRNPVSWK 121
           C   S ++P       K  RGS   F+K++ K++KPIL R S    KKE+PD ++P    
Sbjct: 79  CQAPSESEPPPPPLVTKKRRGS--GFSKVLKKMIKPILSRMSAK--KKEIPDAKDP---- 138

Query: 122 ALRYSNVNQSTDSKSQHKRMRI-------ALRPSFLTTLPLSSTDTPFGANFIEENGRLS 181
                   ++ + ++QH ++ +       A  P+  T L + S       ++ ++ G  S
Sbjct: 139 --------RTHNKRTQHGKLLVFAALSCSATNPTGTTPLNVVSLADKTHQSYPKDYGLQS 198

Query: 182 ANKRPHSVCNGGLSFNHHVHGSPFKLGIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMS 241
           + + P       L F+             I +R+ +Q   D IK+LP   E    + I  
Sbjct: 199 SIEEPK------LDFD------------SIASRLQVQRFIDRIKALPF-RETSVILGIFE 258

Query: 242 QKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDL 301
           Q  C  Q + EFN L M  V   E D+AL L + +S+YGLVP+  TFSIMIRCYC+K DL
Sbjct: 259 QDGC-FQTVSEFNALLMALVIAKEPDIALSLFNEVSAYGLVPDSLTFSIMIRCYCEKNDL 318

Query: 302 ENAARVLGQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCL 361
           + A RVL  M+  G  PN ATITVL+N+ CKRG++Q+ALE++E++GR G KPTVQ YNCL
Sbjct: 319 DEAIRVLVHMVENGFYPNAATITVLINSLCKRGRLQRALEVLEVMGRIGCKPTVQIYNCL 378

Query: 362 LKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGV 421
           LKGLCYVGRVE+A EM+  +KKD++ PDIYT+TA+MDG CKVGRSDEAMELL EA + G+
Sbjct: 379 LKGLCYVGRVEDAYEMLMRIKKDAIKPDIYTFTAVMDGFCKVGRSDEAMELLDEAVEMGL 438

Query: 422 KPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALR 481
            P VVTFNTLFNGYCKEGRP++G+ VLK+MK+ NC PD I+YSTLL GL+KWGK R ALR
Sbjct: 439 TPDVVTFNTLFNGYCKEGRPMEGLNVLKQMKERNCNPDCITYSTLLHGLLKWGKTRNALR 498

Query: 482 TYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLL 541
            YKEMV +G  ++ ++MN  +R LCRR+ KEKDLLEDAH+VFEKM+NE+  ID STYGL+
Sbjct: 499 VYKEMVENGVEVDGRLMNNLVRGLCRRSRKEKDLLEDAHEVFEKMQNEVLGIDASTYGLM 558

Query: 542 IQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALCVLG----HGI 601
           IQ LC   +   A+  L  MIG GYSP  IT + +++ LC  G  +EAL VL      G 
Sbjct: 559 IQTLCMEKKMDAAVVCLQEMIGMGYSPWIITFNNVIKTLCVEGKVTEALLVLSIMYEGGR 605

Query: 602 RFSRISFDLVIEELNEEGMWFSACNVYGLALKRG 619
             + IS++ +I  LN  G +   C+VYG A+KRG
Sbjct: 619 GTNGISYNPLIHGLNRRGSFLGGCSVYGAAVKRG 605

[Close]

BLAST of CmoCh14G000110 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 197.6 bits (501), Expect = 3.0e-50
Identity = 108/346 (31.21%), Postives = 181/346 (52.31%), Query Frame = 0


Query: 240 FNDLFMEFVSEDELDLALKLLSNL-SSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQM 299
           FN L   FV+   LD A  +LS++ +SYG+VP+  T++ +I  Y K+G +  A  VL  M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415

Query: 300 LGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRV 359
             +GC PN  + T+LV+ FCK GK+ +A  ++  +  +G KP    +NCL+   C   R+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475

Query: 360 EEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTL 419
            EA E+  EM +    PD+YT+ +L+ GLC+V     A+ LL +    GV  + VT+NTL
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535

Query: 420 FNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGH 479
            N + + G   +  +++ +M       D I+Y++L++GL + G++  A   +++M+  GH
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595

Query: 480 SIEEKMMNTFMRALCRRTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRT 539
           +      N  +  LCR       ++E+A +  ++M       D  T+  LI  LC   R 
Sbjct: 596 APSNISCNILINGLCR-----SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 655

Query: 540 SEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALCVLGHGI 585
            + L     +  +G  P  +T + ++  LC  G   +A  +L  GI
Sbjct: 656 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI 696

[Close]

BLAST of CmoCh14G000110 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 196.8 bits (499), Expect = 5.1e-50
Identity = 109/344 (31.69%), Postives = 187/344 (54.36%), Query Frame = 0


Query: 236 NICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVL 295
           ++  FN L        +L  A+ +L ++ SYGLVP+ +TF+ +++ Y ++GDL+ A R+ 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247

Query: 296 GQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMV-ELVGRNGRKPTVQAYNCLLKGLCY 355
            QM+  GC+ ++ ++ V+V+ FCK G+++ AL  + E+  ++G  P    +N L+ GLC 
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307

Query: 356 VGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVT 415
            G V+ A E++  M ++   PD+YTY +++ GLCK+G   EA+E+L +       P+ VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367

Query: 416 FNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMV 475
           +NTL +  CKE +  +   + + +      PD  ++++L+QGL      R A+  ++EM 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 476 SSGHSIEEKMMNTFMRALCRRTWKEKDLLEDAHQVFEKMKNELQVIDRS--TYGLLIQAL 535
           S G   +E   N  + +LC      K  L++A  + ++M  EL    RS  TY  LI   
Sbjct: 428 SKGCEPDEFTYNMLIDSLC-----SKGKLDEALNMLKQM--ELSGCARSVITYNTLIDGF 487

Query: 536 CSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEA 577
           C  N+T EA      M   G S  ++T + ++  LC S    +A
Sbjct: 488 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524

[Close]

BLAST of CmoCh14G000110 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 194.5 bits (493), Expect = 2.5e-49
Identity = 111/350 (31.71%), Postives = 179/350 (51.14%), Query Frame = 0


Query: 227 MSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKG 286
           M  K C + N+  +N L   +    ++D   KLL +++  GL PN  +++++I   C++G
Sbjct: 231 METKGC-LPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 290

Query: 287 DLENAARVLGQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGRNGRKPTVQAYN 346
            ++  + VL +M  RG + ++ T   L+  +CK G   +AL M   + R+G  P+V  Y 
Sbjct: 291 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 350

Query: 347 CLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQN 406
            L+  +C  G +  A E + +M+   L P+  TYT L+DG  + G  +EA  +L E   N
Sbjct: 351 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 410

Query: 407 GVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTA 466
           G  PSVVT+N L NG+C  G+  D I VL+ MK+   +PD +SYST+L G  +   +  A
Sbjct: 411 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 470

Query: 467 LRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLLEDAHQVFEKMKNELQVIDRSTYG 526
           LR  +EMV  G   +    ++ ++  C     E+   ++A  ++E+M       D  TY 
Sbjct: 471 LRVKREMVEKGIKPDTITYSSLIQGFC-----EQRRTKEACDLYEEMLRVGLPPDEFTYT 530

Query: 527 LLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEA 577
            LI A C      +AL   + M+ KG  P  +T  V++  L       EA
Sbjct: 531 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574

[Close]

BLAST of CmoCh14G000110 vs. TAIR 10
Match: AT1G62680.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 193.4 bits (490), Expect = 5.6e-49
Identity = 114/410 (27.80%), Postives = 203/410 (49.51%), Query Frame = 0


Query: 216 IPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTF 275
           I   +  ++F    KS    +I +FN L    V   + D+ + L   +   G+  +  TF
Sbjct: 64  IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 276 SIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGR 335
           +I+I C+C    +  A  +LG+ML  G  P+  TI  LVN FC+R ++  A+ +V+ +  
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183

Query: 336 NGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDE 395
            G KP + AYN ++  LC   RV +A +   E+++  + P++ TYTAL++GLC   R  +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 396 AMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQ 455
           A  LLS+  +  + P+V+T++ L + + K G+ L+   + ++M +M+  PD ++YS+L+ 
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303

Query: 456 GLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLLEDAHQVFEKMKN 515
           GL    +I  A + +  MVS G   +    NT +   C+        +ED  ++F +M  
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK-----AKRVEDGMKLFREMSQ 363

Query: 516 ELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASE 575
              V +  TY  LIQ         +A      M   G SP   T ++++  LC +G   +
Sbjct: 364 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 423

Query: 576 ALCVL----GHGIRFSRISFDLVIEELNEEGMWFSACNVYGLALKRGIKP 622
           AL +        +    +++  VI  + + G    A +++     +G+KP
Sbjct: 424 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468

[Close]

BLAST of CmoCh14G000110 vs. TAIR 10
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases )

HSP 1 Score: 191.4 bits (485), Expect = 2.1e-48
Identity = 110/400 (27.50%), Postives = 199/400 (49.75%), Query Frame = 0


Query: 216 IPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTF 275
           I  ++   +F    +S  + ++ +F+  F       + +L L     L   G+  N  T 
Sbjct: 67  IKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126

Query: 276 SIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGR 335
           +IMI C+C+      A  VLG+++  G  P+  T   L+      GK+ +A+ +V+ +  
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186

Query: 336 NGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDE 395
           NG +P V  YN ++ G+C  G    A +++ +M++ ++  D++TY+ ++D LC+ G  D 
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246

Query: 396 AMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQ 455
           A+ L  E E  G+K SVVT+N+L  G CK G+  DG  +LK M      P+ I+++ LL 
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306

Query: 456 GLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLLEDAHQVFEKMKN 515
             +K GK++ A   YKEM++ G S      NT M   C      ++ L +A+ + + M  
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM-----QNRLSEANNMLDLMVR 366

Query: 516 ELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSG--GA 575
                D  T+  LI+  C   R  + +    ++  +G    A+T  ++VQ  C SG    
Sbjct: 367 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 426

Query: 576 SEALC--VLGHGIRFSRISFDLVIEELNEEGMWFSACNVY 612
           +E L   ++ HG+    +++ ++++ L + G    A  ++
Sbjct: 427 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

The following BLAST results are available for this feature:

BLAST of CmoCh14G000110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMF6	4.2e-49	31.21	Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop...	[more]
Q9LFF1	7.2e-49	31.69	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]
Q9FIX3	3.6e-48	31.71	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q3ECK2	7.9e-48	27.80	Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidop...	[more]
P0C7Q7	3.0e-47	27.50	Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS...	[more]

BLAST of CmoCh14G000110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9P1	1.2e-288	100.00	pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata...	[more]
A0A6J1J506	1.2e-277	96.34	pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cuc...	[more]
A0A6J1DW66	1.1e-214	76.33	pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charanti...	[more]
A0A6J5VAX5	1.0e-151	47.35	PPR_long domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS4...	[more]
A0A6J5V7D1	9.8e-150	47.63	PPR_long domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS4...	[more]

BLAST of CmoCh14G000110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64320.1	3.0e-50	31.21	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G53700.1	5.1e-50	31.69	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G39710.1	2.5e-49	31.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62680.1	5.6e-49	27.80	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G12700.1	2.1e-48	27.50	ATP binding;nucleic acid binding;helicases	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 406..497 e-value: 4.7E-24 score: 86.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 498..624 e-value: 5.1E-14 score: 54.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 336..405 e-value: 5.1E-22 score: 80.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 218..335 e-value: 8.7E-22 score: 79.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 523..552 e-value: 0.51 score: 10.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 448..479 e-value: 1.3E-6 score: 26.2 coord: 413..446 e-value: 2.4E-9 score: 34.8 coord: 378..412 e-value: 1.2E-8 score: 32.6 coord: 309..341 e-value: 2.6E-4 score: 19.0 coord: 344..377 e-value: 7.2E-8 score: 30.1 coord: 274..306 e-value: 1.7E-9 score: 35.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 340..389 e-value: 2.2E-16 score: 59.8 coord: 278..319 e-value: 1.8E-10 score: 40.9 coord: 410..459 e-value: 2.0E-14 score: 53.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 411..445 score: 12.682281
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 446..480 score: 10.457138
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 376..410 score: 13.657837
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 341..375 score: 11.454616
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 271..305 score: 12.605553
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 521..555 score: 10.303679
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 306..340 score: 10.161182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..59
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 198..625
None	No IPR available	PANTHER	PTHR47942:SF36	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 198..625
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 252..416

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G000110.1	CmoCh14G000110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding