CmoCh13G011700 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh13G011700
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr13: 9367454 .. 9369771 (-)
RNA-Seq ExpressionCmoCh13G011700
SyntenyCmoCh13G011700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCCCATTTCAGCGACAAATCAAACAACCAACCATTCTCCATTACGAACACACACACACACAACGTTGGTGTGAATAATTCTTAATTATAATGTTGTCTGCCCAAGAACACACTCTCTTAAAACCCTAATCATCTTTGTTTTTATTCAATTAATGATAAGGCTTTTTTGTGGGCAGATTTATGTGTGTGAACGGTACAAAAACCAAGTGTCAGAAAAGAAAAGGCGCAGCATGAAGCACATAAAGTGATGGGTTTAGGCTAAGGGTTATTAGAGTTCCTTCAAATCCCAAATCCCATACCAAATCTTTCAACCAAATCCTATCCCTTTGAATGGTCACTTCCCCTCTACTCCCACCACCTTTTTCTCCTTGTATTGGTATGGTATCGCCAAAATCTAAATTTCAATTTGAGTTACTTACTTGAAGGTCATTGTTGGTAATGTTGAGATTATAGGCTTCAATTCTCGAATTATCGACCATTGTAATGATTATTGTTTGTATGTATAATTAATATTTTCCCTTTTTTTTTGTACACATTAGTCTACCACCTACTTGGGATAGCCACTGGGAAAGCATTAGTAGTTAAGAAAGTATTAAATTATTGTAGGGAGGAGAGCATCTAAGATTAAAAAAAGAAGGGAATAAAAGAGTAGATTGGAAAGAGAACGACCAATTAAACACATCTATTTCTCTTAAATGGTTTAAAATGGAATGGAGCCGAGAAAATAAGAAATACACAATATTTTTAAAAGGACAAACAATGAATGGGGATAGTATGAAAAAACAAAGATATATATATTTTTTATTTAGTGATTGTGATTTTGTTTGGTTGTGTGACATGTGACGACACTAAAACCAATTTAGTACTATATTTATGTACATATTGGTCCATGCCTATTATAGTTAGGCATGCGTATGTTTCATTTTTCCATTCTTACAGTGCCAACATAGTTTTAATGTTTTTATTAATAAAATCACGCTTCAACAAAACTATCAATAATGTAAAATTCATTAATTAATTACATATTTCACTTACATTGGATCTGAATGTAAATCCAATAAGGTCTTTGGACGTTTTGCCCTAATTTCGAGGGTAGGCTACCCCACGAACTGAGCTCAAAGGGACGGGCCTCCTCTGGAGTCAACCCCCCCATTAATGTAAATGTCAAACCCCTTCAAATCTTTTTTTTATAAAAATATAAATAACAATTAATGATAATAATAAGCAAAGGAATACTAATTTATCATAATATATATAGACAACAACAGTTGTCTGTTGTTGAGGAAATAATGAAATTACAAGAATCTCCCTCCCTCCCTCCTTTTCTCTCTATGCTCCCCCACCCCCACCTAGCTCAGTTGAATTGATTGGAGTCACTTTCTGTAAATGAGTTTCAACGACATTGAAATCTTTCTTAATGTAAAGACCCTTAAAAACTGGGTAATGAGATAAGGTGAAAGTGTAAAACAGATCTCTACATGCTAGGGAGGGGTATGGGAGGGGGCCGGGGCCAGGGCCAGGGCATGTAGTTTAGAAAGTCGGATAGAGGGAGGGCGGGGGTGGGTTAATGAGCTGTGCAGCACCCACGTCACATGAGACTCACCGCTACAGCTTCAGGTGGGGTCTTTCACCCCATAGGTACGCCCCCACCGCCCTTTTGTCCACGGGGGGAGGGGAAGAGCAGGAGCACTGCAACCCCAGTTTTCCTTTTTCTTTTCCTTCTCGCCTCCTCGGTGCTGCTAATGAACCACCTCACTCAATGCCAATATTTCAGTCACATAAGTAATGTAATGTAGGAGGCCCAATGGCTACTGCCTATTCAGTATCCGAAGGTCAAGGAATGACAATAAAGCAACTTTGAGTTGCCCGACATTGGCATTCACAGCTTTCACTGTATGGTTACAATATTGGATACAAAGTCTACGGGGAATATATTTATATATCCATAATCTACATCATATGATGAGAGAGGGGAATGGGATCATGGTGATACTAGTTGCACAGGCCCCTCCTCCCCCACTGAAAAGGATCCCATTCTGGCACTTAAAAGGCACCCAGTTGGGTCACAATCCTTTCATGGCTAGAATTCATTAATCCGATCATTTCAATCAAAATCACAAAAAGTAGAATCCCAAAAGTGTGCAGTTCTCATATGCTATGCCACACTTACTGTCTATGAGAAAGGAGAAAAAAACAGATAACACATCACACACTGTATCCTTCTTAATTTTTCTTGGCATAGGAAAACAGAGGCAGCTATGCAAAATTATTCCACTTCACAATTCAGTAAGTTCAAATTGAAGCAGCGCACATAG

mRNA sequence

ATGCGCCCATTTCAGCGACAAATCAAACAACCAACCATTCTCCATTACGAACACACACACACACAACTGATTGTGATTTTGTTTGGTTGTGTGACATGTGACGACACTAAAACCAATTTAGTACTATATTTATGTACATATTGGTCCATGCCTATTATAGTTAGGCATGCAATCTCCCTCCCTCCCTCCTTTTCTCTCTATGCTCCCCCACCCCCACCTAGCTCAGTTGAATTGATTGGAGTCACTTTCTATCTCTACATGCTAGGGAGGGGTATGGGAGGGGGCCGGGGCCAGGGCCAGGGCATGTACGCCCCCACCGCCCTTTTGTCCACGGGGGGAGGGGAAGAGCAGGAGCACTGCAACCCCAGTTTTCCTTTTTCTTTTCCTTCTCGCCTCCTCGGTGCTGCTAATGAACCACCTCACTCAATGCCAATATTTCAGTCACATAAGAAAACAGAGGCAGCTATGCAAAATTATTCCACTTCACAATTCAGTAAGTTCAAATTGAAGCAGCGCACATAG

Coding sequence (CDS)

ATGCGCCCATTTCAGCGACAAATCAAACAACCAACCATTCTCCATTACGAACACACACACACACAACTGATTGTGATTTTGTTTGGTTGTGTGACATGTGACGACACTAAAACCAATTTAGTACTATATTTATGTACATATTGGTCCATGCCTATTATAGTTAGGCATGCAATCTCCCTCCCTCCCTCCTTTTCTCTCTATGCTCCCCCACCCCCACCTAGCTCAGTTGAATTGATTGGAGTCACTTTCTATCTCTACATGCTAGGGAGGGGTATGGGAGGGGGCCGGGGCCAGGGCCAGGGCATGTACGCCCCCACCGCCCTTTTGTCCACGGGGGGAGGGGAAGAGCAGGAGCACTGCAACCCCAGTTTTCCTTTTTCTTTTCCTTCTCGCCTCCTCGGTGCTGCTAATGAACCACCTCACTCAATGCCAATATTTCAGTCACATAAGAAAACAGAGGCAGCTATGCAAAATTATTCCACTTCACAATTCAGTAAGTTCAAATTGAAGCAGCGCACATAG

Protein sequence

MRPFQRQIKQPTILHYEHTHTQLIVILFGCVTCDDTKTNLVLYLCTYWSMPIIVRHAISLPPSFSLYAPPPPPSSVELIGVTFYLYMLGRGMGGGRGQGQGMYAPTALLSTGGGEEQEHCNPSFPFSFPSRLLGAANEPPHSMPIFQSHKKTEAAMQNYSTSQFSKFKLKQRT
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..30
score: 6.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G011700.1CmoCh13G011700.1mRNA