CmoCh13G010480 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G010480
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Location	Cmo_Chr13: 8769608 .. 8774227 (+)
RNA-Seq Expression	CmoCh13G010480
Synteny	CmoCh13G010480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCCCATCAACCTCACCGAAAGAAACCACACTCCCATTACAACAACTGGGCTCCATAGCTTCATTCATGGCAATGATCTAAAGGGAAAAAAACACAAGGAGGAAGAAAGAATAATCAAAACAGAAACAGAGAGAAAAAGATTGTTTGATAATGATGAGGGGATGGCCGTTCATTCATCTTCCTCTGTACTTGTGGTAGAAATGTGAGAGGAGGGAGGCAGGGAGCTTCTGCCCCTTGGAAATTTGCTGCTATCATTAAGAAGCCCAATGGGTAGCACCGGAGGTCTTTGATAATTGGTAGCCAAAATTTGAGGAAATTTTCTGTTCATGCCAAGTGACCATGATGACCATGATGATCATGATCTCTTGCTTTCAGGCTATAAATTGAGAAGCAAATGAACCCATTTTCATCCAACATTCCACATCTCTCTCTCTCTATCACAGTACCTAAAGTTCAAGAGTATTCTGAGAGGGAAAATGAAGGCATCACAGATAGCAGTGAGCATATTGGTGATGTTTATGATGGCGGAGGTCTCAGTGGCAGTGACATGCAGTCCACTGCAACTGAGCTCCTGTGTGAGTGCAATCACATCTTCAGTTCCGCCATCTAAGCTCTGCTGCTCAAAGATTAAGGAACAGAAGCCCTGCCTCTGCAAGTACATGCAGAACCCCACCTTAAGGAAGTTTGTGGCCTCTCCCAATGCCAGGAAAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAGGAATTGGTCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCTCAAGGGACCTCTCTCTCTCATTTTCTACACTGTTCTGCGTCCATTGTCATGTGCTTGATTGATTACTAGCTAAATCATAATCTGTGTGTGTGGTGTGTTTGACTTCAGTGTGTATCTGTCCAGTGTTTGTAGTAAGATCAGAGAGGGTTGTAGTTATTGAACAAATGGGGAGTATTTGTGTTGAGTCTTGCTCTTATCACATCCCCCATCTTATGTGTACAAGCTTCTGATGATTGCAGCCCCATCTTATGTGTACAAGCTTCTGATGATTGTTTGTAATAGCAAATCAGATTTGGACCAAAGCTCTTCCTACCCCCCCCCTCCCCAAGACCTGAATCCTCTCCTCAAACTATATTATGAACTACTGCTACCAAAGTTATATACTTAGAAAAAAAAACCTCTAATATTTAACGGACCAAGAGATCCCACGATGGTTGGAGAGGAAAACTAAACATTCTTTTATAAGGGTGCAGAAACTTTTCCTGAACGAACCCGTTTTAAAATCTTGAGAGAAACCTCGGAAGAGAAAGTCCAAAGAAATCTGTTAGTGGTAGGCTTAAACGGTTACAACCCTAATGAACGACGTGGGAAAACGAATCAAATTCTTTTGTTCAGATTGGAATTAGTGAATCGATTGTCTCCTATCTATCTCAGACACAGTCTACGAGGAATTCTGGAGGAAAGCTCCAAAATTAGTCAAGACATACGAAAGGAATCAGAAGATTATTTACAAGAAAAACGAATTTTCTCACAGATTAAGGAAGTTTGAAATTGGGTTCCATCCCATAATCCATGGTCTTTTGTCAGAAGGAACAGCAAAGTTGAGTTCAAACATCTCCCTGGACATGTTGCCACCTTCGCGGAACCCAACAAGCTTTGCCACTATCTCTGCACTGTCCTGAATATGCTTAGGGTCGTGAGGATTTGTCCAGAGTTTGTTTACAAATTGGATTCTCCTCTGTTTCCCCTCAAGAGGTACTTCCCATCTAATGTACAATGCATCTCTTTCTTCTGCTGTCAAACGAGAAGAAAATCTCTTTGCAAGAAACTCTCTTTCACGTCTCAATGCCCTTATGCTACATAGAAGAACAAGATGGAGAAGGAAAAATTACGGTAATCATTCCAATTGATTGATCAAACGTTAAGAAAGGAGAGAAAAGAAACCTTGACGAGCGAGAGATTGTTGGCTCGTCTCCAACGTGAGCTCCACTAGCATTGCCAAATTCCGCTAGGTGCTCCTGCAGCCATGTTAAGCGCCTCATCTCTACTTCCAGGTAAATCTGATCAGCCTGGTCGCCCTTGAATAAAAGGTAGAACTGAGATCTGTGAATAATGGAGACATAGCAAGCATCCCATAACTCAATAATCTGCTGCCTTTGCTCCCTGAAAGTTACATGCCACGGAACTTGGAACTCATCCTGCTCAAATGAGTTTTCATCACAATCTAATTTGTTGCCAGCAGCTTCATTTGCTTCCAGCTCAAGGACCTACATACAACGTGGAAAAGAACATGTAGACTTAGTGATGTTAATGAATGCAAAAATTTTATGGATGAAATTCAAACAACAATTATAGCACACCTGACAAACAAGTAGCTGTTTTTGGTACTGCAGTTTAGCCACACGTTCTTTCAATTCTGTAACATATGCTCTTATGCTTCTTACGTTTTCTTCTGCAGCATTTTGGAACATCTTTTGCATCTTCTTCATGTTCACAGAACTTGATCTTTGATAACAAGGAGTGCTCACCTTTGACGAGACATCTCCACCTTCTTCACTCTTTGTTGGAGTCCCTTTCTCAGACTCGTACAAAATTTCAGGTGAGAATACATCATCATTCCCAGGAGGTCTATTTTCAAAATCGGACTCCAGTACTTGCTGGGAAGTTGTTGAAGGTGAGCATGGCGATCTTAAAAAGTTTTGGCGGTTGGCAACATTACTTGAGGCCAAAGGAAGCAATTTCTTCTTTTTGGTATAACTTTTTTGTTTGGGGGTTGATTCACTCATGAACTGCTGATAATTGGTTGGCAGAGACATTACCAACTTGTCAATAGACTTCTGAACATTTTCAAGCTGCTCTTCTAAATTGGCAATGGTGCTACCTTGAGAATGAAGCCGTGTTATCTCTTCCTTTAGATTAGCACCTACACTCTGGTTAGTAGCAATAACGCTACCAACCTCAACCTCTTTTGGTTCTAAACGGACTGACCTCATTCCTCTTATTTCAGCTTGCAACTTGGCAATTGTTTCTGCTGCATCTTGGTTCCCCAGTCTGTGACAAGCCACCTCCTTTTGCAATACTTCCAGGGCTCTATTAGCTTCCTCCCCAAGCTGTTCCTGGAGATGTTCCAGCTTGCGAATTTCATGCATAAGTGTGAAAGGAGCAGTAGATGATTGTCGCATGATAGACTGCCTTAATATCATGCCACGGCCAAAGTCCTTGCCGTCAAGTTTCTGAGGCAATGTCCCAGTGAAGGACAAGCACTTCTTCACTGGAGGACGAGCAGATTCAATTGGGTTTGAAACCTGAAAATAACAATGGATGTTACTATTTTTTCTGATCTCAAGGAACGTGATATATTGTTAGAGAGAATTGTATTGTCAGCGAGTATAAGGAGGTAGGAGAGAGACCTGCTGGTCCTCCTCAAGTTTTCTGCGGAGCTCGTCGACCTGGGATTGAGCAAGGTCTCTTTGTCGCCTTAATTCTTCAATCTCCATTTCCATCTGGATTTTGA

mRNA sequence

ATGACTCCCATCAACCTCACCGAAAGAAACCACACTCCCATTACAACAACTGGGCTCCATAGCTTCATTCATGGCAATGATCTAAAGGGAAAAAAACACAAGGAGGAAGAAAGAATAATCAAAACAGAAACAGAGAGAAAAAGATTGTTTGATAATGATGAGGGGATGGCCGTTCATTCATCTTCCTCTGTACTTGTGTACCTAAAGTTCAAGAGTATTCTGAGAGGGAAAATGAAGGCATCACAGATAGCAGTGAGCATATTGGTGATGTTTATGATGGCGGAGGTCTCAGTGGCAGTGACATGCAGTCCACTGCAACTGAGCTCCTGTGTGAGTGCAATCACATCTTCAGTTCCGCCATCTAAGCTCTGCTGCTCAAAGATTAAGGAACAGAAGCCCTGCCTCTGCAAGTACATGCAGAACCCCACCTTAAGGAAGTTTGTGGCCTCTCCCAATGCCAGGAAAGTTGCTAACACTTGTGGAACTCCATTTCCCAAAAGGAACAGCAAAGTTGAGTTCAAACATCTCCCTGGACATGTTGCCACCTTCGCGGAACCCAACAAGCTTTGCCACTATCTCTGCACTGTCCTGAATATGCTTAGGGTCGTGAGGATTTGTCCAGAGTTTGTTTACAAATTGGATTCTCCTCTGTTTCCCCTCAAGAGGTACTTCCCATCTAATCATTTTGGAACATCTTTTGCATCTTCTTCATGTTCACAGAACTTGATCTTTGATAACAAGGAGTGCTCACCTTTGACGAGACATCTCCACCTTCTTCACTCTTTGTTGGAGTCCCTTTCTCAGACTCGTACAAAATTTCAGTCTGTGACAAGCCACCTCCTTTTGCAATACTTCCAGGGCTCTATTAGCTTCCTCCCCAAGCTGTTCCTGGAGATGTTCCAGCTTGCGAATTTCATGCATAACGAGTATAAGGAGGTAGGAGAGAGACCTGCTGGTCCTCCTCAAGTTTTCTGCGGAGCTCGTCGACCTGGGATTGAGCAAGGTCTCTTTGTCGCCTTAATTCTTCAATCTCCATTTCCATCTGGATTTTGA

Coding sequence (CDS)

ATGACTCCCATCAACCTCACCGAAAGAAACCACACTCCCATTACAACAACTGGGCTCCATAGCTTCATTCATGGCAATGATCTAAAGGGAAAAAAACACAAGGAGGAAGAAAGAATAATCAAAACAGAAACAGAGAGAAAAAGATTGTTTGATAATGATGAGGGGATGGCCGTTCATTCATCTTCCTCTGTACTTGTGTACCTAAAGTTCAAGAGTATTCTGAGAGGGAAAATGAAGGCATCACAGATAGCAGTGAGCATATTGGTGATGTTTATGATGGCGGAGGTCTCAGTGGCAGTGACATGCAGTCCACTGCAACTGAGCTCCTGTGTGAGTGCAATCACATCTTCAGTTCCGCCATCTAAGCTCTGCTGCTCAAAGATTAAGGAACAGAAGCCCTGCCTCTGCAAGTACATGCAGAACCCCACCTTAAGGAAGTTTGTGGCCTCTCCCAATGCCAGGAAAGTTGCTAACACTTGTGGAACTCCATTTCCCAAAAGGAACAGCAAAGTTGAGTTCAAACATCTCCCTGGACATGTTGCCACCTTCGCGGAACCCAACAAGCTTTGCCACTATCTCTGCACTGTCCTGAATATGCTTAGGGTCGTGAGGATTTGTCCAGAGTTTGTTTACAAATTGGATTCTCCTCTGTTTCCCCTCAAGAGGTACTTCCCATCTAATCATTTTGGAACATCTTTTGCATCTTCTTCATGTTCACAGAACTTGATCTTTGATAACAAGGAGTGCTCACCTTTGACGAGACATCTCCACCTTCTTCACTCTTTGTTGGAGTCCCTTTCTCAGACTCGTACAAAATTTCAGTCTGTGACAAGCCACCTCCTTTTGCAATACTTCCAGGGCTCTATTAGCTTCCTCCCCAAGCTGTTCCTGGAGATGTTCCAGCTTGCGAATTTCATGCATAACGAGTATAAGGAGGTAGGAGAGAGACCTGCTGGTCCTCCTCAAGTTTTCTGCGGAGCTCGTCGACCTGGGATTGAGCAAGGTCTCTTTGTCGCCTTAATTCTTCAATCTCCATTTCCATCTGGATTTTGA

Protein sequence

MTPINLTERNHTPITTTGLHSFIHGNDLKGKKHKEEERIIKTETERKRLFDNDEGMAVHSSSSVLVYLKFKSILRGKMKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCGTPFPKRNSKVEFKHLPGHVATFAEPNKLCHYLCTVLNMLRVVRICPEFVYKLDSPLFPLKRYFPSNHFGTSFASSSCSQNLIFDNKECSPLTRHLHLLHSLLESLSQTRTKFQSVTSHLLLQYFQGSISFLPKLFLEMFQLANFMHNEYKEVGERPAGPPQVFCGARRPGIEQGLFVALILQSPFPSGF

Homology

[Close]

BLAST of CmoCh13G010480 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.3e-17
Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 0


Query: 74  LRGKMKASQI-AVSILVMFM--MAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKE 133
           ++ KMK S + AV ++ +F+  +  V+ AVTC+P +LSSCV AIT    PS  CCSK+K 
Sbjct: 3   MKMKMKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKV 62

Query: 134 QKPCLCKYMQNPTLRKFVASPNARKVANTCGTPFP 166
           Q+PCLC Y++NP+L+++V SP A+KV + CG  +P
Sbjct: 63  QEPCLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYP 97

[Close]

BLAST of CmoCh13G010480 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 9.0e-17
Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 100 VTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANT 159
           VTCSP+QLS C+  I S  P    CC K++EQ+PCLC Y++NP+LR++V SPNARK+A+ 
Sbjct: 1   VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 160 CGTPFPK 167
           CG P P+
Sbjct: 61  CGVPVPQ 67

[Close]

BLAST of CmoCh13G010480 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.2e-15
Identity = 36/61 (59.02%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 101 TCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTC 160
           TCS +QLS C++AIT + PPS  CC+K+KEQKPCLC Y+++P L+ +V SP ARK A++C
Sbjct: 2   TCSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSC 61

Query: 161 G 162
           G
Sbjct: 62  G 62

[Close]

BLAST of CmoCh13G010480 vs. ExPASy Swiss-Prot
Match: P82901 (Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.6e-08
Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 0


Query: 102 CSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCG 161
           C   QL+ C SAI S   PS  CC  ++ Q+PC C+Y ++PT  +++ SP+AR    +CG
Sbjct: 2   CQASQLAVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTLQSCG 61

Query: 162 TPFP 166
              P
Sbjct: 62  LAVP 65

[Close]

BLAST of CmoCh13G010480 vs. ExPASy Swiss-Prot
Match: P82900 (Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 2.9e-07
Identity = 30/94 (31.91%), Postives = 48/94 (51.06%), Query Frame = 0


Query: 74  LRGKMKASQIAVSILVMFMMAEV--SVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQ 133
           + G MK   +   +L + ++A         C   QL+ C SAI S   PS  CC  ++ Q
Sbjct: 1   MAGMMKKQVVTALMLALVVLAAAPGGARAACQASQLAVCASAILSGAKPSGECCGNLRAQ 60

Query: 134 KPCLCKYMQNPTLRKFVASPNARKVANTCGTPFP 166
           + C C+Y ++PT  +++ SP+AR    +CG   P
Sbjct: 61  QGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVP 94

[Close]

BLAST of CmoCh13G010480 vs. ExPASy TrEMBL
Match: A0A6J1KNT4 (probable non-specific lipid-transfer protein AKCS9 OS=Cucurbita maxima OX=3661 GN=LOC111495166 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 4.3e-46
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 59  HSSSSVLVYLKFKSILRGKMKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSV 118
           H S S+  YLKFKSILRGKMKASQIAV+ILVMFMMAEVSVAVTCSPLQLSSCVSAITSSV
Sbjct: 32  HLSLSLSQYLKFKSILRGKMKASQIAVTILVMFMMAEVSVAVTCSPLQLSSCVSAITSSV 91

Query: 119 PPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCGTPFPK 167
           PPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCGTPFPK
Sbjct: 92  PPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCGTPFPK 139

[Close]

BLAST of CmoCh13G010480 vs. ExPASy TrEMBL
Match: A0A6J1ECM2 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111431330 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.9e-39
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 78  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 137
           MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1   MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 138 YMQNPTLRKFVASPNARKVANTCGTPFPK 167
           YMQNPTLRKFVASPNARKVANTCGTPFPK
Sbjct: 61  YMQNPTLRKFVASPNARKVANTCGTPFPK 89

[Close]

BLAST of CmoCh13G010480 vs. ExPASy TrEMBL
Match: A0A0A0LVT5 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042560 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 6.9e-36
Identity = 80/89 (89.89%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 78  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 137
           MKASQIA+SI+VMFM  E+++AVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1   MKASQIALSIIVMFMTVEITMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 138 YMQNPTLRKFVASPNARKVANTCGTPFPK 167
           YMQNPTL+KFVASPNARKVANTCGTPFPK
Sbjct: 61  YMQNPTLKKFVASPNARKVANTCGTPFPK 89

[Close]

BLAST of CmoCh13G010480 vs. ExPASy TrEMBL
Match: A0A5D3BJV8 (Non-specific lipid-transfer protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002150 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.5e-35
Identity = 78/89 (87.64%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 78  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 137
           MKASQIA+SI+VMFMM E+S+AVTCSP+QLSSCVSAITSSVPPS LCCSKIKEQ+PCLCK
Sbjct: 1   MKASQIALSIIVMFMMVEISMAVTCSPVQLSSCVSAITSSVPPSSLCCSKIKEQRPCLCK 60

Query: 138 YMQNPTLRKFVASPNARKVANTCGTPFPK 167
           YMQNPTL+KFVASPNA+KVA+TCGTPFPK
Sbjct: 61  YMQNPTLKKFVASPNAKKVASTCGTPFPK 89

[Close]

BLAST of CmoCh13G010480 vs. ExPASy TrEMBL
Match: V7C3M6 (AAI domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G154200g PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.1e-28
Identity = 69/91 (75.82%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 78  MKASQIAVSILVMFMMAE--VSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCL 137
           MKA+ IA+  LV+ ++AE  VS+AVTCSP+QLSSCVSAITSS PPS LCCSKIKEQKPCL
Sbjct: 1   MKAAHIALCTLVVLLVAEVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQKPCL 60

Query: 138 CKYMQNPTLRKFVASPNARKVANTCGTPFPK 167
           CKY++NP L+KFV SPNARKVA+TCGTPFP+
Sbjct: 61  CKYLKNPNLKKFVDSPNARKVASTCGTPFPR 91

[Close]

BLAST of CmoCh13G010480 vs. NCBI nr
Match: XP_023000838.1 (probable non-specific lipid-transfer protein AKCS9 [Cucurbita maxima])

HSP 1 Score: 195.3 bits (495), Expect = 8.9e-46
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 59  HSSSSVLVYLKFKSILRGKMKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSV 118
           H S S+  YLKFKSILRGKMKASQIAV+ILVMFMMAEVSVAVTCSPLQLSSCVSAITSSV
Sbjct: 32  HLSLSLSQYLKFKSILRGKMKASQIAVTILVMFMMAEVSVAVTCSPLQLSSCVSAITSSV 91

Query: 119 PPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCGTPFPK 167
           PPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCGTPFPK
Sbjct: 92  PPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCGTPFPK 139

[Close]

BLAST of CmoCh13G010480 vs. NCBI nr
Match: XP_022923700.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata] >XP_023519179.1 non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo] >KAG6584342.1 hypothetical protein SDJN03_20274, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172.2 bits (435), Expect = 8.1e-39
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 78  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 137
           MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1   MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 138 YMQNPTLRKFVASPNARKVANTCGTPFPK 167
           YMQNPTLRKFVASPNARKVANTCGTPFPK
Sbjct: 61  YMQNPTLRKFVASPNARKVANTCGTPFPK 89

[Close]

BLAST of CmoCh13G010480 vs. NCBI nr
Match: KAG7019930.1 (hypothetical protein SDJN02_18897, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 168.7 bits (426), Expect = 8.9e-38
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 78  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 137
           MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1   MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 138 YMQNPTLRKFVASPNARKVANTCGTPFPK 167
           YMQNPTLRKFVASPNARKVANTC TPFPK
Sbjct: 61  YMQNPTLRKFVASPNARKVANTCVTPFPK 89

[Close]

BLAST of CmoCh13G010480 vs. NCBI nr
Match: XP_004137484.1 (non-specific lipid-transfer protein 2 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-35
Identity = 80/89 (89.89%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 78  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 137
           MKASQIA+SI+VMFM  E+++AVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1   MKASQIALSIIVMFMTVEITMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 138 YMQNPTLRKFVASPNARKVANTCGTPFPK 167
           YMQNPTL+KFVASPNARKVANTCGTPFPK
Sbjct: 61  YMQNPTLKKFVASPNARKVANTCGTPFPK 89

[Close]

BLAST of CmoCh13G010480 vs. NCBI nr
Match: KAG6572947.1 (hypothetical protein SDJN03_26834, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 160.6 bits (405), Expect = 2.4e-35
Identity = 81/89 (91.01%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 78  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 137
           MKASQIAVS++VMFMM EV VAVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1   MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 138 YMQNPTLRKFVASPNARKVANTCGTPFPK 167
           YMQNPTL+KFV SPNAR+VANTCGTPFPK
Sbjct: 61  YMQNPTLKKFVDSPNARRVANTCGTPFPK 89

[Close]

BLAST of CmoCh13G010480 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 3.0e-23
Identity = 49/86 (56.98%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 81  SQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQ 140
           S  A++ +++ ++A  + AVTCSP+QLS C +AITSS PPS LCC+K+KEQ+PCLC YM+
Sbjct: 10  SLFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCGYMR 69

Query: 141 NPTLRKFVASPNARKVANTCGTPFPK 167
           NP+LR+FV++PNARKV+ +C  P P+
Sbjct: 70  NPSLRRFVSTPNARKVSKSCKLPIPR 95

[Close]

BLAST of CmoCh13G010480 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 1.5e-22
Identity = 48/88 (54.55%), Postives = 70/88 (79.55%), Query Frame = 0


Query: 78  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 137
           M  S +A++  ++ +   V+  VTCSP+QL+SC +A+TSS PPS+ CC+K++EQ+PCLC 
Sbjct: 5   MWVSVLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCG 64

Query: 138 YMQNPTLRKFVASPNARKVANTCGTPFP 166
           YM+NPTLR++V+SPNARKV+N+C  P P
Sbjct: 65  YMRNPTLRQYVSSPNARKVSNSCKIPSP 92

[Close]

BLAST of CmoCh13G010480 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-14
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 100 VTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANT 159
           VTC  +QLSSC + + + VPPS  CC K+KEQ+PC C Y+++P   ++V S NA+K   T
Sbjct: 36  VTCDAVQLSSCATPMLTGVPPSTECCGKLKEQQPCFCTYIKDPRYSQYVGSANAKKTLAT 95

Query: 160 CGTPFP 166
           CG P+P
Sbjct: 96  CGVPYP 101

[Close]

BLAST of CmoCh13G010480 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 3.3e-14
Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 0


Query: 98  VAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVA 157
           V VTC   QLSSCV+A+++  PPS  CC K+KE + CLC Y+QNP    +V SPNARK  
Sbjct: 34  VNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTL 93

Query: 158 NTCGTPFP 166
             C   +P
Sbjct: 94  AACDVAYP 101

[Close]

BLAST of CmoCh13G010480 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 4.3e-14
Identity = 35/80 (43.75%), Postives = 51/80 (63.75%), Query Frame = 0


Query: 87  ILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRK 146
           IL++     V+    C+P QLS C+  I     PS LCCSK+KEQ+ C+C+Y++NP  + 
Sbjct: 18  ILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKNPNFKS 77

Query: 147 FVASPNARKVANTCGTPFPK 167
           F+ SPNA+ +A  C  P+PK
Sbjct: 78  FLNSPNAKIIATDCHCPYPK 97

The following BLAST results are available for this feature:

BLAST of CmoCh13G010480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43681	5.3e-17	48.42	Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 ...	[more]
P82353	9.0e-17	56.72	Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1	[more]
P86809	2.2e-15	59.02	Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=27811...	[more]
P82901	2.6e-08	40.63	Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1	[more]
P82900	2.9e-07	31.91	Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2	[more]

BLAST of CmoCh13G010480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KNT4	4.3e-46	94.44	probable non-specific lipid-transfer protein AKCS9 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1ECM2	3.9e-39	100.00	non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0LVT5	6.9e-36	89.89	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042560 PE=4 SV...	[more]
A0A5D3BJV8	4.5e-35	87.64	Non-specific lipid-transfer protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
V7C3M6	4.1e-28	75.82	AAI domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G154200g...	[more]

BLAST of CmoCh13G010480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023000838.1	8.9e-46	94.44	probable non-specific lipid-transfer protein AKCS9 [Cucurbita maxima]	[more]
XP_022923700.1	8.1e-39	100.00	non-specific lipid-transfer protein 2-like [Cucurbita moschata] >XP_023519179.1 ...	[more]
KAG7019930.1	8.9e-38	98.88	hypothetical protein SDJN02_18897, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_004137484.1	1.4e-35	89.89	non-specific lipid-transfer protein 2 [Cucumis sativus]	[more]
KAG6572947.1	2.4e-35	91.01	hypothetical protein SDJN03_26834, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh13G010480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18280.1	3.0e-23	56.98	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G48750.1	1.5e-22	54.55	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38170.1	1.1e-14	50.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38160.1	3.3e-14	51.47	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73780.1	4.3e-14	43.75	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 97..163 e-value: 3.0E-6 score: 27.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 100..167 e-value: 4.5E-21 score: 76.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 101..166
IPR033872	Non-specific lipid-transfer protein type 2	PANTHER	PTHR33214	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 79..166
IPR033872	Non-specific lipid-transfer protein type 2	CDD	cd01959	nsLTP2	coord: 102..166 e-value: 6.59557E-30 score: 107.399
None	No IPR available	PANTHER	PTHR33214:SF30	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 79..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G010480.1	CmoCh13G010480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding