CmoCh13G006220 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh13G006220
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr13: 6741939 .. 6747479 (+)
RNA-Seq ExpressionCmoCh13G006220
SyntenyCmoCh13G006220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGAAGAAGAAGAAGAAGATTCCTTTTTGCCAATTCGCATCATAATTTTGTTCGTTCATATGAAGCTGTGGGTTAATTTAGAGGAAAAGGGAAACAAAGTTGTGGGTGTGGGGTCTCTGGTTTACTCTTTAGCGATTATTTAGGGAAAGAGGTAAATTTGGGCCAACATACATCGAGACAAGAATTAAAGGGCGAGGCTGATGGTATTGACTTTAAAGTATTTGGTGATGTTTTGGTTTGGTAGTGTGCGTGTGAGAGAATGGCAGACACAGAGTTGAAGACAGCCGCTTGATTGTGGGGTTCATAATTGCTTGGAATTTTGGCTGTTTGCAGGGTTGAAGAAGATCGAGGGGCGTGGGGGAAAAGGGCAGAAGCTGTAAGCCAAAAACGTCGCTGTCTCGAGGTGGCCAACCTATATAGAGAGGATCATTTGTCAATTTTTTCACTGACTTGATGCTTATCGGACATCAAATTTCTATGAATTTTCTACTCATAGGAGGGAGTCCACTGCAGTAAAAATTAGTGGGCCAAAGCTTGATATGGTAGACGTAATATCCCCTCCAATCTTCAAAGCCTACGGAAGTAGCGAGTAAATCACTTGATTGGTGTTTAAAGTAGAGATGCCCCCACCGGCCAGGCAGGGGAAAAGAACAGGGCAGGATCGGAGCTGGGGTTCTGCTGAGAATTTGAAGGGATCCGGTTCCACTCATAATTTTACCTATTTACTATCCTTTAAAAAAATAGTTAATAACCCTGGCCCCGTTTATACATCGGAAAAAAGTATTTCTCACTCCCTCTCCCATTCCTTGATGAGACGGAGATAACCCCTCCCTGTTTGGGGCGGGTCTTGCAAGAACCCTGACCCCGCAAATAAAATAGATATCAGGTCCTGTACTTTAGCAGTCTTAACCTGATTACACTTAGAAAGTTGAGCAATAACAAAAGATCTCATTAATATTTACTATTCAATAGAGAGAGCAAATCTAAAGATAAGTTCCCATGCACTGGTGTACAGTCAGTTCGTGCTTCTCTGATGAAACTTACAAAAAAAAGGAGCCTCCTTCGTTCTGGTGTAATTTGCTTTCCCCCTGGCTATTTTTTACAGGTCGAGAAATTTAGTGGAATACATGAGTTACAAGCAACATTTTCACGACATTTTCATTCTGAACGTATACATGGTTGGTCACAGATAAAAAGCTAAAAGCCATTTCCCTTGCTTTTCAAAATGGTTCGATACTTACTACCATGGAACTGTATTCATCCCTCTTAGGATCTTCTATCCAACTTCCTCTCACTGGATCTTTGAGATCTTTTTTCTTCAGCCGCTCGCCGTCTTTGTTGTCTATCAACAGGAATGATGTGTTAGGATCGTACAACAACGCACACACTCGATCAAGATGAACACAAAGAACAAGGGAGAAAAAATTCGAAGAGGAATATTGGTTAAAGGTTTTATTGATGACTTCACGTATGTACACAAACAGAGAATATAAAGAATGAAAAAAGTACGTCGTGAAAGCACGGCCTAATGGGGTATATATTTGGTTTCAGTTTAACAAATTTAAACACCTATTAAATATAATCTACCAAATATCTCTACCACATTTTTTCAATATCTACCATTAATATCTCTGCCAGATCTTTACGAAATATCTACTATATATATCTCTACCAAATCTTTTATTATAAATGATCATCAGGTTCCATATCCAACAATTCTCCCATTTGGACACATCTTGTCATCAGGTTCCATATCCAACAATTCTCCCATTTGGACACATCTTGTCATCAGGTTCCATATCCAACAATTCACCAATAATTTCATTCTCAATTTCACCACACCAAACCAATTGAGGCTTTGCACAATCTCAATGTTCCAACATCAACACATCTTGTCAACATGTTTGCTAGATTTTTTGCACCATCTATCTTTGACAAACACATCACCATTTTCCACTAACCTGCGAGTGAAATTGTATTGTCTTTTGTGTTTTGTCTTTGAATGATAGACCGGATTCCTCACCATCCGTATGACATACTAACTATCTGTATAAAGAATCTTTTCATGCGGCTTATTGTCCAATTCTTCTATATAGTATGTCATCCATATCATCTCCTTTCCAACTTCAACTATTACCACATACTCAGTCTCAGTAGATGAAGGAGCAACACATTTTTGAAGCCTAAACATTCCATCATTCATGGTTTGCTCCAACTGTAGGGCCTCATCAAAGAACTTTGGTTCCCCTTCATCTCATCAGTTAACAACAGATAGTGTAATGAAGGTAGATACCTATCTAATACTCTAATAGCTCTTGATGACCTTTTCAACACCTGCTCAAGTGTCACTTGCTCCTCTAGTTCCTCAGCAACAGTCTCGGGAGTTCATTCAGTACTTGCTCTACCTCTGTCCAAAAGTGACCTATTTCTCCACAACTCCAACACTTTACGTTTGGTTTGTTTGGAAATTTTCACAGTTTTTTGACTTTGATCGACCTTTGTTTGGGCCATGTGATTACTTCTTCCCCTCTGGTCAACACTGAGAACACCACCAAATGAATCCCCCAATTTCTCATTCGCGAATACTTTCGCTAAGAACTACATCTTGGATTTCATCGAACTTCAGCTTCTCATATCATCAGGAACTGCTAATCGCGGCAACAACAGTATCCCACAACTCGAGTAAAGATGACAGCAAAATCAATGTTTTAATTTCATCTTCGAAATTAATCTCCACCGAACTCAATTAACTTACAATCACATTGAATTCGTTTATATGATCAGCAACAGATACACTTTCAGACATTTGTAAATTGAACAATCTTCGCATCAAATACACTTTGTTCATAGCCGACAGTTTTTCGTACATATTCGACAACACCTTCAATAGGTCTGATGTTGTCTTCTCCTTGATTATGTTGAGCGCCACATTTCTGGACAGCGTCAACCGGATCAATCCTAGGGCTTAATGATCCTTGAGCTTCCACTTCTCCGTGGTCATGGTATTCGGCTTTAGCCCAACAGGGGGTTCGGGAAGATCTTTCTGGTACAGATAATCTTTAATCTGCATCTTCCAGAAACCAAAATCGGATCCATTGAACTTCTCAATTGCAATCATTGAACTTTCCATCTTCACAAATCGTGGTGAATTTCACCTAGCTCTAATACCAGTTGTTAGGATCGTACACACTCGATCAAGATGAACAAAAAGAATAGGAGATAGAAAATTCAATGAACAATGTTGACTAAAGGTTTTATTGATGACTCCAGGTATGTACACCAAGAGAGAATACAGAGAATGAAGAAACTATGTTCCGAAAGCACTTCCTAATGGGGTATATATAGGTTTAGGTTTAACAGATTTAACCACCGAAATATAATCTAACAAATCTTTACGAAATATCTACCATATATATCTCTATCAGATCTTTTAATATAAATAGTCATCAAGGTCCATGATGCGGATGAATATTTAACTTTCAGATGCCACTAAAAGTTAAAGAGCTCTAATTGTTCCTATTCAAGGCAGTACAATATCTATGCTAATTAAAAAACCAAAATCAATGTAGTCATTGAGAAAGGGTAAACAAACTTACGCAAAAGCCATGTATCCAGAGCCAACATTAGCAGCAGATAGTAAAGTTGAATGAGCACTAGCTGCATCAGACCCACCAGAAATGACTGGATTTTTTCTATCGCCATCTACCTGAAATGTATTCAACAAATACTAAGCAATACAGTATAGATCACTGATACGCACGATTACACATTGGAAAATCGTCACCTTATCCCATTTTGATTTTTTGTTTTGTCTTCCATCTCTAGTAATGGCATCAGATGCATGAGCTCCAGAATGTAATCCATTACCAGCGACAGCTGAAACACCTGCAAAAGGAATCAACAGAAAAACGCTATAAGAAGAAAATACACCATCAGAAAGAGACTAAAGCACGATTGGTACAAACCTGAAAAAGGTATATTTATTTTAGGAGCAGCCACAACTGTACCACCAGGTTGTGTTCCTCCAGAAACAAACTCCATCTTCGGACTTTTCTTCCTTTCCAGCTCCTTCCTCTCCATCTCACGTTTCATGTCAGCCTCTAGAACAAAATATGAAGCTTTGAAAATATTGTTTGAAATTAATAATAAGTGCATGTAAATAATACAATTGTTTGTACTTTGTAACATGTTCTCCAGTCTCCACCACATACTAAATTTGCGTCTTGCAAATGGGTAAAAGTAGAATGTGCAGAGAATATAGATCAACGTAAAAAAAACATTAACACTGAGAGGAGAAAGACAGAAATTCTGCCAATTGTGCAAATTTTAGTTCCTTGATAACCTCTCAATGTCAAAAGATCCTATCAGTCAGTTCATGACAGCAAAATCATCACAATATGACCGCCCGTATTTCTGTAATAACATCTTGAGTAATCTTTTCAAATTGTCAAGACAGCTGATTATGAAATTTATTTAAAAAAACAAAACTGGTAATATTAAAACTAGTGTCATACACGGACCAAGAGCATGTGATGTTTTTTTATAAATGATAAGGAGAAATAACATGAGAGATATACAGAAGGAATTGTCAATGACCTATTTCAGTATAGTAGTCACTTTTATCATATCCATGAGGGTCAAACACATCCTTACTGAAGCAAGACCCAATCTGGTCAATATCTTGATACCTCACAGCGTGTAACAAGAAATCTGGATTCCGGTAGTCTTTCCTAATGCGTACTTCTGCATTGAAGCTTTTTCCAGCTTTCTTATACTCAAGAAACTTATTGATTTTCCTCTGCACATAAAGTTAAGGAAAGAAACAAGAACGTCAGGAGAATAAAAAATAATTAAGCCATGAATATTGAAGAAACTAGATGGATGTGGTTATCAATGACTAAAAGGTACTGTCTTCTTACTTAACAGTCCACAGGGACTCCTTTTAACTGGTCCTTAAGGTAAGTCATACCCAAGTTGCTAGGAATTGAAAAACCAATACATCCTGCAGAACTAAAATAATTTCATCGCACTAAGACCTTACACTTACATAATTCCCCGTGCATCCACATTCTAAAATTTATATCTATCAAGAGGGCCATACAACAAAAAACCAATCCCCATCAAGGTCAGAAACCAAGTCACACACTCGCCGACATAGAATACATTAGGCCCACCAACATGTAAGCATATCCTAACCCCATATCCTGCCAGTCACATTAGTAAACAACCCAAGCTACTCACTTGAGAAACTAAAAAGGAGTAAATATATTTCATACAAATTAACTGCTTTATGTTTCTTTTCAAAATCTAGATCAACAGTCACATACTATTTCCTCAGAACACAAGTAGCCAATATATCAGAAAGGAAACTAACTTGCAGATCCTCAGCGCATCTTTCCTTTGGCGGAGGAAGAAAATTGTCCAAGGGATCAGTATCTTTTTTAGCTTCTTCAACAGTTTCCTCAACATTTTCAGTTTCAGATTCCAGTATCACATTATTCATTGAACCAGAATGTGGTGATTCAGAAATCTGA

mRNA sequence

ATGGAAGAAGAAGAAGAAGAAGAAGATTCCTTTTTGCCAATTCGCATCATAATTTTGTTCGTTCATATGAAGCTGTGGGTTAATTTAGAGGAAAAGGGAAACAAAGTTGTGGGGTTGAAGAAGATCGAGGGGCGTGGGGGAAAAGGGCAGAAGCTGAGGGAGTCCACTGCAGTAAAAATTAGTGGGCCAAAGCTTGATATGGTAGACGTAATATCCCCTCCAATCTTCAAAGCCTACGGAAGTAGCGAGTCGAGAAATTTAGTGGAATACATGAGTTACAAGCAACATTTTCACGACATTTTCATTCTGAACGTATACATGATGCATGAGCTCCAGAATGTAATCCATTACCAGCGACAGCTGAAACACCTGCAAAAGGAATCAACAGAAAAACGCTATAAGAAGAAAATACACCATCAGAAAGAGACTAAAGCACGATTGGAGCAGCCACAACTGTACCACCAGGTTGTGTTCCTCCAGAAACAAACTCCATCTTCGGACTTTTCTTCCTTTCCAGCTCCTTCCTCTCCATCTCACAGGGCCATACAACAAAAAACCAATCCCCATCAAGGTCAGAAACCAAGTCACACACTCGCCGACATAGAATACATTAGGCCCACCAACATATCAACAGTCACATACTATTTCCTCAGAACACAAGTAGCCAATATATCAGAAAGGAAACTAACTTGCAGATCCTCAGCGCATCTTTCCTTTGGCGGAGGAAGAAAATTGTCCAAGGGATCAGTATCTTTTTTAGCTTCTTCAACAGTTTCCTCAACATTTTCAGTTTCAGATTCCAGTATCACATTATTCATTGAACCAGAATGTGGTGATTCAGAAATCTGA

Coding sequence (CDS)

ATGGAAGAAGAAGAAGAAGAAGAAGATTCCTTTTTGCCAATTCGCATCATAATTTTGTTCGTTCATATGAAGCTGTGGGTTAATTTAGAGGAAAAGGGAAACAAAGTTGTGGGGTTGAAGAAGATCGAGGGGCGTGGGGGAAAAGGGCAGAAGCTGAGGGAGTCCACTGCAGTAAAAATTAGTGGGCCAAAGCTTGATATGGTAGACGTAATATCCCCTCCAATCTTCAAAGCCTACGGAAGTAGCGAGTCGAGAAATTTAGTGGAATACATGAGTTACAAGCAACATTTTCACGACATTTTCATTCTGAACGTATACATGATGCATGAGCTCCAGAATGTAATCCATTACCAGCGACAGCTGAAACACCTGCAAAAGGAATCAACAGAAAAACGCTATAAGAAGAAAATACACCATCAGAAAGAGACTAAAGCACGATTGGAGCAGCCACAACTGTACCACCAGGTTGTGTTCCTCCAGAAACAAACTCCATCTTCGGACTTTTCTTCCTTTCCAGCTCCTTCCTCTCCATCTCACAGGGCCATACAACAAAAAACCAATCCCCATCAAGGTCAGAAACCAAGTCACACACTCGCCGACATAGAATACATTAGGCCCACCAACATATCAACAGTCACATACTATTTCCTCAGAACACAAGTAGCCAATATATCAGAAAGGAAACTAACTTGCAGATCCTCAGCGCATCTTTCCTTTGGCGGAGGAAGAAAATTGTCCAAGGGATCAGTATCTTTTTTAGCTTCTTCAACAGTTTCCTCAACATTTTCAGTTTCAGATTCCAGTATCACATTATTCATTGAACCAGAATGTGGTGATTCAGAAATCTGA

Protein sequence

MEEEEEEEDSFLPIRIIILFVHMKLWVNLEEKGNKVVGLKKIEGRGGKGQKLRESTAVKISGPKLDMVDVISPPIFKAYGSSESRNLVEYMSYKQHFHDIFILNVYMMHELQNVIHYQRQLKHLQKESTEKRYKKKIHHQKETKARLEQPQLYHQVVFLQKQTPSSDFSSFPAPSSPSHRAIQQKTNPHQGQKPSHTLADIEYIRPTNISTVTYYFLRTQVANISERKLTCRSSAHLSFGGGRKLSKGSVSFLASSTVSSTFSVSDSSITLFIEPECGDSEI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..194

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G006220.1CmoCh13G006220.1mRNA