CmoCh13G003710 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G003710
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	secoisolariciresinol dehydrogenase-like
Location	Cmo_Chr13: 4730906 .. 4732946 (-)
RNA-Seq Expression	CmoCh13G003710
Synteny	CmoCh13G003710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGTTAATTGCGTGTCGCCCCATGTAGTGCCCTCGCAGATGACTAGGGATCTATTTAAGCTTGAAGATGGCGATGAGTTTCCTAATGTTTATTCGCATTTCAAATGTGGAGATATTTTAAGGGCCGAAGATATAGCTGAAGCTGCTTTGTATTTAGCAAGTGATGCATCGAAATTTGTGAGTGGACATAACTTAATTGTTGATGGAGGCTTCACTTCAGCAAACCAAGGTCTTTGTTCCTACCAATAATAAAGTTGAAACGAAGAACTACTTGTTTCAGACTTCGGGTTCTTTTCTAAACTTGATCATGGATTATGTTTCTAGTTTTATTTTTATGGTTTGTGTCTCAATTGAACTATTTCAACTTTTGTTTGTTGCATATTTCTCGTGTTTAACATTATTATAAGAATATGAATTCTAATAATGTAATTTAATTTTTCGCTTTGGTTCTTGTCTCAATTGTGGTGTTGACATCATCTTCATCCATTTAAGTTGTCGAGTATTAGTAGTCTGAACAATAGTAGGGTTGGATCCTGCAATTACTGAGCATTTAGCTAGAGACATGGAAATTACTTTGTATTTTAGTAGAAAATCCATACCTAACACGACATTAAAGTCATCCATCTAGACAATCACAAAATCGACCTGATCATTCCAATTCTCCAGTTTGATTGGAGTTCCTTTTACAATTCTCTAGGTACACTTCGAGGGCTTGGCGTTAGCTGGCACACACTTGATATTGTCAATATCTTTCTTAGGTGATCTTTGTGATCCACCTCCACCTTGAAACGCTGATATACCATCAATGATGACAATAATGATCATATCAAGAAAGTCCTACGAACACTTGATTTGTTAGTTCTTTAAACTCGACAAGACAATAGTTAGGTCGAAGGACATAACGGTAATCTCTTAATTCTCTTATAGCTCCCGAATGAAACTTTTGGCATGTTCTTCTCTCTGATCCTTATTTGAATGTAACATGACCTTGACATGACCCTTGTGGTCCTTATTCTATTACCAAGGATAGCCTCATAGTTCCTTCTCATGTGACCAACTCGGGTTCTCATAGCGTGACACCCTGTCACTTGCTTGCTAGAGCACTATTACTTAGCTAAATTTTGTAGAGCCTAGTTGGGAGTAGCTAATCATTTCATGAGTCTTTTTGGTGTTTACCTAAGCTAGTTCTCATAATATCTCAAGGTTGGCCTAGTCGAGATTCCTGTAGCAATGATATCTCGTCACTGGCTCATCCAAACACATCAACCTCTTTGGTTCTTGTACTGGATCCTAGAGAACTCTCTGTAAGCTCAAGTGTGGTGGCTAGCTTTTTCTTAAGTTTTTTTATACTTCCTCTACAGATAGGTGTAACGTTCTATACCCAAGTTTCAAATCATAATTTAAATCTGGATTTAGTACCTAATGGCCCCGACCATCTCTTGGATCCCGTGTGACATACTATGTCTTCTGTTAGTCTTGTCTACTGGCTAGTCATGAATACTACCACCACCGAGGTTGTTCTTAAATCGTGTTATCTAGAGGCTCTCTTCTATCTGAGCTTGTTTCACAAGCATTTCATATGAAATCGTGCATTTGGAATTTGAGTTCAACTCTTCATGATCTAGATCACCTAAACGAGTGTAGGTTCTTATCATCGCAGCACCTAGTCACTCCTTTCTTTAGATGATGAAAGAGTGGGTCATAGCTTGACCCATTAGTATTGTCCTTCACTAGCCAACCATGAGGGTTCCCGACCTTGACTTTGTGAACATGCTTGTCTAATGTTGAGGACGGCTCAGGTCACAGTCATATAATCTTGATAACTACATGCTGCTACTAAGCTTGAACCTCTCCTCTAAAGTCTATAACAAATTCATCTCTTCTAAACCAAGGATGCTACTCGAAACAAGTACTTTTTGGGACTCTGTAGCTATTTCTATGTACTCCTATTGTAAATGAAAAAACATTTTGTTATCCTAAATTTTAATATTTTGACGACTTTATATATAAATTACCTTTTTTTTTTCAAGTTCATTGA

mRNA sequence

ATGAGGGTTAATTGCGTGTCGCCCCATGTAGTGCCCTCGCAGATGACTAGGGATCTATTTAAGCTTGAAGATGGCGATGAGTTTCCTAATGTTTATTCGCATTTCAAATGTGGAGATATTTTAAGGGCCGAAGATATAGCTGAAGCTGCTTTGTATTTAGCAAGTGATGCATCGAAATTTGTGAGTGGACATAACTTAATTGTTGATGGAGGCTTCACTTCAGCAAACCAAGTTCATTGA

Coding sequence (CDS)

ATGAGGGTTAATTGCGTGTCGCCCCATGTAGTGCCCTCGCAGATGACTAGGGATCTATTTAAGCTTGAAGATGGCGATGAGTTTCCTAATGTTTATTCGCATTTCAAATGTGGAGATATTTTAAGGGCCGAAGATATAGCTGAAGCTGCTTTGTATTTAGCAAGTGATGCATCGAAATTTGTGAGTGGACATAACTTAATTGTTGATGGAGGCTTCACTTCAGCAAACCAAGTTCATTGA

Protein sequence

MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKFVSGHNLIVDGGFTSANQVH

Homology

[Close]

BLAST of CmoCh13G003710 vs. ExPASy Swiss-Prot
Match: Q94KL8 (Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum OX=35933 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.4e-13
Identity = 37/78 (47.44%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDG--DEFPNVYSHFKCGDILRAEDIAEAALYLASDAS 60
           +RVNCVSP++V S +  D+F ++    +E  +  ++ K G +LRAED+A+A  YLA D S
Sbjct: 190 IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLK-GTLLRAEDVADAVAYLAGDES 249

Query: 61  KFVSGHNLIVDGGFTSAN 77
           K+VSG NL++DGG+T  N
Sbjct: 250 KYVSGLNLVIDGGYTRTN 266

[Close]

BLAST of CmoCh13G003710 vs. ExPASy Swiss-Prot
Match: A3F5F0 (Secoisolariciresinol dehydrogenase OS=Sinopodophyllum hexandrum OX=93608 GN=SDH PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.8e-13
Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDG--DEFPNVYSHFKCGDILRAEDIAEAALYLASDAS 60
           +RVNCVSP+VV S +  D+F ++    +E  +  ++ K G +LRAED+A+A  YLA D S
Sbjct: 190 IRVNCVSPYVVASPLLTDVFGVDSSRVEELAHQAANLK-GILLRAEDVADAVAYLAGDES 249

Query: 61  KFVSGHNLIVDGGFTSAN 77
           K+VSG NL++DGG+T  N
Sbjct: 250 KYVSGLNLVIDGGYTRTN 266

[Close]

BLAST of CmoCh13G003710 vs. ExPASy Swiss-Prot
Match: Q9SCU0 (Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana OX=3702 GN=SDR2a PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.0e-13
Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFK-----------LEDGDEFPNVYSHFKCGDILRAEDIAEA 60
           +RVNC+SP  V + M  + ++           +E+ +EF    ++ K G+ LRA DIAEA
Sbjct: 213 IRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLK-GETLRANDIAEA 272

Query: 61  ALYLASDASKFVSGHNLIVDGGFTSA 76
           ALYLASD SK+V+GHNL+VDGG T+A
Sbjct: 273 ALYLASDESKYVNGHNLVVDGGVTTA 297

[Close]

BLAST of CmoCh13G003710 vs. ExPASy Swiss-Prot
Match: Q94KL7 (Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia OX=55183 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 6.8e-13
Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNV--YSHFKCGDILRAEDIAEAALYLASDAS 60
           +RVNC+SP  +P+ + +    +++ +EF NV  ++    G     ED+A AALYLASD +
Sbjct: 189 IRVNCLSPFGLPTALGKKFSGIKNEEEFENVINFAGNLKGPKFNVEDVANAALYLASDEA 248

Query: 61  KFVSGHNLIVDGGFTSANQV 79
           K+VSGHNL +DGGF+  N V
Sbjct: 249 KYVSGHNLFIDGGFSVCNSV 268

[Close]

BLAST of CmoCh13G003710 vs. ExPASy Swiss-Prot
Match: F1SWA0 (Zerumbone synthase OS=Zingiber zerumbet OX=311405 GN=ZSD1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-09
Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDGDE--------FPNVYSHFKCGDILRAEDIAEAALY 60
           +RVNCVSP+ VP++++       +  E        F    ++ K  D++   D+AEA LY
Sbjct: 178 IRVNCVSPYAVPTRLSMPYLPESEMQEDALRGFLTFVRSNANLKGVDLM-PNDVAEAVLY 237

Query: 61  LASDASKFVSGHNLIVDGGFTSAN 77
           LA++ SK+VSG NL++DGGF+ AN
Sbjct: 238 LATEESKYVSGLNLVIDGGFSIAN 260

[Close]

BLAST of CmoCh13G003710 vs. ExPASy TrEMBL
Match: A0A6J1I6S5 (secoisolariciresinol dehydrogenase-like OS=Cucurbita maxima OX=3661 GN=LOC111471670 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 7.7e-36
Identity = 75/77 (97.40%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKF 60
           +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDAS+F
Sbjct: 187 IRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASRF 246

Query: 61  VSGHNLIVDGGFTSANQ 78
           VSGHNLIVDGGFTSANQ
Sbjct: 247 VSGHNLIVDGGFTSANQ 263

[Close]

BLAST of CmoCh13G003710 vs. ExPASy TrEMBL
Match: A0A6J1EID0 (secoisolariciresinol dehydrogenase-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434358 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.9e-35
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKF 60
           +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILR EDIAEAALYLASDAS+F
Sbjct: 187 IRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRPEDIAEAALYLASDASRF 246

Query: 61  VSGHNLIVDGGFTSANQ 78
           VSGHNLIVDGGFTSANQ
Sbjct: 247 VSGHNLIVDGGFTSANQ 263

[Close]

BLAST of CmoCh13G003710 vs. ExPASy TrEMBL
Match: A0A6J1EPB9 (secoisolariciresinol dehydrogenase-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434358 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.9e-35
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKF 60
           +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILR EDIAEAALYLASDAS+F
Sbjct: 187 IRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRPEDIAEAALYLASDASRF 246

Query: 61  VSGHNLIVDGGFTSANQ 78
           VSGHNLIVDGGFTSANQ
Sbjct: 247 VSGHNLIVDGGFTSANQ 263

[Close]

BLAST of CmoCh13G003710 vs. ExPASy TrEMBL
Match: A0A6J1EI14 (secoisolariciresinol dehydrogenase-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111434358 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.9e-35
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKF 60
           +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILR EDIAEAALYLASDAS+F
Sbjct: 187 IRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRPEDIAEAALYLASDASRF 246

Query: 61  VSGHNLIVDGGFTSANQ 78
           VSGHNLIVDGGFTSANQ
Sbjct: 247 VSGHNLIVDGGFTSANQ 263

[Close]

BLAST of CmoCh13G003710 vs. ExPASy TrEMBL
Match: A0A6J1ELC4 (secoisolariciresinol dehydrogenase-like OS=Cucurbita moschata OX=3662 GN=LOC111434357 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.5e-34
Identity = 71/77 (92.21%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKF 60
           +RVNCVSPHVVPS +TR+LFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDAS+F
Sbjct: 187 IRVNCVSPHVVPSDITRELFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASRF 246

Query: 61  VSGHNLIVDGGFTSANQ 78
           VSGHNLIVDGGFT+ANQ
Sbjct: 247 VSGHNLIVDGGFTAANQ 263

[Close]

BLAST of CmoCh13G003710 vs. NCBI nr
Match: XP_022973162.1 (secoisolariciresinol dehydrogenase-like [Cucurbita maxima])

HSP 1 Score: 159.1 bits (401), Expect = 1.6e-35
Identity = 75/77 (97.40%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKF 60
           +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDAS+F
Sbjct: 187 IRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASRF 246

Query: 61  VSGHNLIVDGGFTSANQ 78
           VSGHNLIVDGGFTSANQ
Sbjct: 247 VSGHNLIVDGGFTSANQ 263

[Close]

BLAST of CmoCh13G003710 vs. NCBI nr
Match: XP_022927565.1 (secoisolariciresinol dehydrogenase-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 157.1 bits (396), Expect = 6.1e-35
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKF 60
           +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILR EDIAEAALYLASDAS+F
Sbjct: 187 IRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRPEDIAEAALYLASDASRF 246

Query: 61  VSGHNLIVDGGFTSANQ 78
           VSGHNLIVDGGFTSANQ
Sbjct: 247 VSGHNLIVDGGFTSANQ 263

[Close]

BLAST of CmoCh13G003710 vs. NCBI nr
Match: XP_022927564.1 (secoisolariciresinol dehydrogenase-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 157.1 bits (396), Expect = 6.1e-35
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKF 60
           +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILR EDIAEAALYLASDAS+F
Sbjct: 187 IRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRPEDIAEAALYLASDASRF 246

Query: 61  VSGHNLIVDGGFTSANQ 78
           VSGHNLIVDGGFTSANQ
Sbjct: 247 VSGHNLIVDGGFTSANQ 263

[Close]

BLAST of CmoCh13G003710 vs. NCBI nr
Match: KAG6583702.1 (hypothetical protein SDJN03_19634, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 157.1 bits (396), Expect = 6.1e-35
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKF 60
           +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILR EDIAEAALYLASDAS+F
Sbjct: 187 IRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRPEDIAEAALYLASDASRF 246

Query: 61  VSGHNLIVDGGFTSANQ 78
           VSGHNLIVDGGFTSANQ
Sbjct: 247 VSGHNLIVDGGFTSANQ 263

[Close]

BLAST of CmoCh13G003710 vs. NCBI nr
Match: XP_022927566.1 (secoisolariciresinol dehydrogenase-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 157.1 bits (396), Expect = 6.1e-35
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASKF 60
           +RVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILR EDIAEAALYLASDAS+F
Sbjct: 187 IRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFKCGDILRPEDIAEAALYLASDASRF 246

Query: 61  VSGHNLIVDGGFTSANQ 78
           VSGHNLIVDGGFTSANQ
Sbjct: 247 VSGHNLIVDGGFTSANQ 263

[Close]

BLAST of CmoCh13G003710 vs. TAIR 10
Match: AT3G51680.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 2.8e-14
Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFK-----------LEDGDEFPNVYSHFKCGDILRAEDIAEA 60
           +RVNC+SP  V + M  + ++           +E+ +EF    ++ K G+ LRA DIAEA
Sbjct: 213 IRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLK-GETLRANDIAEA 272

Query: 61  ALYLASDASKFVSGHNLIVDGGFTSA 76
           ALYLASD SK+V+GHNL+VDGG T+A
Sbjct: 273 ALYLASDESKYVNGHNLVVDGGVTTA 297

[Close]

BLAST of CmoCh13G003710 vs. TAIR 10
Match: AT3G26760.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 3.8e-11
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLF---------KLEDGDEFPNVYSHFKCGDILRAEDIAEAAL 60
           +R+NC+SP  +P+ +T  +F         + E      N     K G+     D+A+AAL
Sbjct: 210 LRINCISPAGIPTPLTLRMFREAFAGHSIREEQLLAIVNATGELK-GEKCEEIDVAKAAL 269

Query: 61  YLASDASKFVSGHNLIVDGGFT 74
           YLASD +KFV+GHNL+VDGGFT
Sbjct: 270 YLASDDAKFVTGHNLVVDGGFT 290

[Close]

BLAST of CmoCh13G003710 vs. TAIR 10
Match: AT4G03140.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 1.1e-10
Identity = 33/80 (41.25%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFK-----LEDGDEFPNVYS-HFKCGDILRAEDIAEAALYLA 60
           +RVNC+SP  + +    D  +     ++D      V S     G++    D+A AA+YLA
Sbjct: 251 IRVNCISPFAITTSFVMDEMRQIYPGVDDSRLIQIVQSTGVLNGEVCEPTDVANAAVYLA 310

Query: 61  SDASKFVSGHNLIVDGGFTS 75
           SD SK+V+GHNL+VDGGFT+
Sbjct: 311 SDDSKYVNGHNLVVDGGFTT 330

[Close]

BLAST of CmoCh13G003710 vs. TAIR 10
Match: AT1G52340.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 1.6e-09
Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDGDEFPNVYSHFK---------CGDILRAEDIAEAAL 60
           +RVNCVSP+ V +++   L  L + +   + +  F+          G  L  +D+A A L
Sbjct: 196 IRVNCVSPYAVATKLA--LAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVL 255

Query: 61  YLASDASKFVSGHNLIVDGGFTSAN 77
           +LASD S+++SG NL++DGGFT  N
Sbjct: 256 FLASDDSRYISGDNLMIDGGFTCTN 278

[Close]

BLAST of CmoCh13G003710 vs. TAIR 10
Match: AT2G47140.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 6.1e-09
Identity = 32/75 (42.67%), Postives = 50/75 (66.67%), Query Frame = 0


Query: 1   MRVNCVSPHVVPSQMTRDLFKLEDG--DEFPNVYSHFKCGDILRAEDIAEAALYLASDAS 60
           +RVN V+P  V + +  + FK+E    ++  +  ++ K G +L+A  +AEAAL+LASD S
Sbjct: 180 IRVNGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLK-GIVLKARHVAEAALFLASDES 239

Query: 61  KFVSGHNLIVDGGFT 74
            +VSG NL VDGG++
Sbjct: 240 AYVSGQNLAVDGGYS 253

The following BLAST results are available for this feature:

BLAST of CmoCh13G003710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94KL8	1.4e-13	47.44	Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum OX=35933 P...	[more]
A3F5F0	1.8e-13	48.72	Secoisolariciresinol dehydrogenase OS=Sinopodophyllum hexandrum OX=93608 GN=SDH ...	[more]
Q9SCU0	4.0e-13	47.67	Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana OX=3702 GN=SDR2a ...	[more]
Q94KL7	6.8e-13	45.00	Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia OX=55183 P...	[more]
F1SWA0	1.2e-09	40.48	Zerumbone synthase OS=Zingiber zerumbet OX=311405 GN=ZSD1 PE=1 SV=1	[more]

BLAST of CmoCh13G003710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I6S5	7.7e-36	97.40	secoisolariciresinol dehydrogenase-like OS=Cucurbita maxima OX=3661 GN=LOC111471...	[more]
A0A6J1EID0	2.9e-35	96.10	secoisolariciresinol dehydrogenase-like isoform X1 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1EPB9	2.9e-35	96.10	secoisolariciresinol dehydrogenase-like isoform X2 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1EI14	2.9e-35	96.10	secoisolariciresinol dehydrogenase-like isoform X3 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1ELC4	5.5e-34	92.21	secoisolariciresinol dehydrogenase-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of CmoCh13G003710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022973162.1	1.6e-35	97.40	secoisolariciresinol dehydrogenase-like [Cucurbita maxima]	[more]
XP_022927565.1	6.1e-35	96.10	secoisolariciresinol dehydrogenase-like isoform X2 [Cucurbita moschata]	[more]
XP_022927564.1	6.1e-35	96.10	secoisolariciresinol dehydrogenase-like isoform X1 [Cucurbita moschata]	[more]
KAG6583702.1	6.1e-35	96.10	hypothetical protein SDJN03_19634, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022927566.1	6.1e-35	96.10	secoisolariciresinol dehydrogenase-like isoform X3 [Cucurbita moschata]	[more]

BLAST of CmoCh13G003710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51680.1	2.8e-14	47.67	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G26760.1	3.8e-11	42.68	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G03140.1	1.1e-10	41.25	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G52340.1	1.6e-09	37.65	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47140.1	6.1e-09	42.67	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 78..79
None	No IPR available	PFAM	PF13561	adh_short_C2	coord: 2..73 e-value: 7.5E-15 score: 55.1
None	No IPR available	GENE3D	3.40.50.720		coord: 1..78 e-value: 6.0E-17 score: 63.7
None	No IPR available	PANTHER	PTHR43180	3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210)	coord: 1..77
None	No IPR available	PANTHER	PTHR43180:SF30	MOMILACTONE A SYNTHASE	coord: 1..77
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 2..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G003710.1	CmoCh13G003710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity