CmoCh13G003670 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G003670
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	NDR1/HIN1-like protein 1
Location	Cmo_Chr13: 4702845 .. 4703897 (+)
RNA-Seq Expression	CmoCh13G003670
Synteny	CmoCh13G003670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTCACCTACTATAAAACTATCTTGTTTGTGAAGCCAAAAATATATCCCTCTCTCTCTCTCACAACAATGACGGTAAAGGACTGCGACCACCACCACCACCACCACTGCGAGCGCCGCCGTCTCTACCGCCGAATAGCCTGCGCCATCTTCACTGTCATCCTCTTGATTAGCCTTGTCATCTTCCTCATCTGGGCTATCCTCCGGCCGTCCAAGCCCCGCCTCATTCTCCAAGACGTCACCGTTTTCGGCCTGAACGTCTCGTCGGTGCCACCGGCTGCCATCTCGACCACCATGCAGGTCACCATCTCCTCCCACAACCCCAACTCCCGCATTGGTGTTTACTACCAAATCATGGATGTTTACGCCGCCTACCGCGGCCAGCAGGTCACTCTCCCGACGCTCTTGCCGCCGACTTACCAAGGCCACAATGATGTCACCATTTGGTCACCGTTTTTGTACGGCGAAGCTGTGCCGGTGGCGCCCGAGTTTGCTGAAGCTTTGAATGAGGATAATAACGTTGGAGCCATGCTGTTCAATATCAAGATCAATGGACAGGTTTTGCTCGTAGAATATATTTTATACAGTTGTAATCAGTATTTTTCTTTTTTAATTGTGTTGCACTATACTTTCCATCTTATTTATGTTGTTCATTCTTAACTTAATATATTTTGTCTCAACGAAACAGGTTAGGTGGAAGGTTGGGAGCTGGATCTCAGGCAGGTATCGGTTGAACGCGAACTGTCCGGCGTATATAAAGTTCGGTGATCCAAAGAATGGGATTGCATTCGGACCGGCGATGAAATTTCGGTTCGTTCAAGGTTGTTATGTCGATATTTGAGGTCCCAAGAGTCCACTTCTTGTATTTCCTTTTCCACGACCCTTATAAGTCTTTATGATCAACGAGATTTATTAGAATTATAGTTCTAAATTCTTTAAATCGACTACTTTTTATATGTATACACACATCATAGATCCGGGTGTACCTCGTTAGATTGAGGGAACTTTTTGGACCAACCTAAAAGTTCGGGTTCGTTGGATTAGTAGTCTAACC

mRNA sequence

CTGTCACCTACTATAAAACTATCTTGTTTGTGAAGCCAAAAATATATCCCTCTCTCTCTCTCACAACAATGACGGTAAAGGACTGCGACCACCACCACCACCACCACTGCGAGCGCCGCCGTCTCTACCGCCGAATAGCCTGCGCCATCTTCACTGTCATCCTCTTGATTAGCCTTGTCATCTTCCTCATCTGGGCTATCCTCCGGCCGTCCAAGCCCCGCCTCATTCTCCAAGACGTCACCGTTTTCGGCCTGAACGTCTCGTCGGTGCCACCGGCTGCCATCTCGACCACCATGCAGGTCACCATCTCCTCCCACAACCCCAACTCCCGCATTGGTGTTTACTACCAAATCATGGATGTTTACGCCGCCTACCGCGGCCAGCAGGTCACTCTCCCGACGCTCTTGCCGCCGACTTACCAAGGCCACAATGATGTCACCATTTGGTCACCGTTTTTGTACGGCGAAGCTGTGCCGGTGGCGCCCGAGTTTGCTGAAGCTTTGAATGAGGATAATAACGTTGGAGCCATGCTGTTCAATATCAAGATCAATGGACAGGTTAGGTGGAAGGTTGGGAGCTGGATCTCAGGCAGGTATCGGTTGAACGCGAACTGTCCGGCGTATATAAAGTTCGGTGATCCAAAGAATGGGATTGCATTCGGACCGGCGATGAAATTTCGGTTCGTTCAAGGTTGTTATGTCGATATTTGAGGTCCCAAGAGTCCACTTCTTGTATTTCCTTTTCCACGACCCTTATAAGTCTTTATGATCAACGAGATTTATTAGAATTATAGTTCTAAATTCTTTAAATCGACTACTTTTTATATGTATACACACATCATAGATCCGGGTGTACCTCGTTAGATTGAGGGAACTTTTTGGACCAACCTAAAAGTTCGGGTTCGTTGGATTAGTAGTCTAACC

Coding sequence (CDS)

ATGACGGTAAAGGACTGCGACCACCACCACCACCACCACTGCGAGCGCCGCCGTCTCTACCGCCGAATAGCCTGCGCCATCTTCACTGTCATCCTCTTGATTAGCCTTGTCATCTTCCTCATCTGGGCTATCCTCCGGCCGTCCAAGCCCCGCCTCATTCTCCAAGACGTCACCGTTTTCGGCCTGAACGTCTCGTCGGTGCCACCGGCTGCCATCTCGACCACCATGCAGGTCACCATCTCCTCCCACAACCCCAACTCCCGCATTGGTGTTTACTACCAAATCATGGATGTTTACGCCGCCTACCGCGGCCAGCAGGTCACTCTCCCGACGCTCTTGCCGCCGACTTACCAAGGCCACAATGATGTCACCATTTGGTCACCGTTTTTGTACGGCGAAGCTGTGCCGGTGGCGCCCGAGTTTGCTGAAGCTTTGAATGAGGATAATAACGTTGGAGCCATGCTGTTCAATATCAAGATCAATGGACAGGTTAGGTGGAAGGTTGGGAGCTGGATCTCAGGCAGGTATCGGTTGAACGCGAACTGTCCGGCGTATATAAAGTTCGGTGATCCAAAGAATGGGATTGCATTCGGACCGGCGATGAAATTTCGGTTCGTTCAAGGTTGTTATGTCGATATTTGA

Protein sequence

MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVFGLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGHNDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI

Homology

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BLAST of CmoCh13G003670 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.7e-61
Identity = 111/212 (52.36%), Postives = 151/212 (71.23%), Query Frame = 0


Query: 3   VKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVFGL 62
           +KDC++H H    RR+L RRI  +I  V+ +I L I LIWAIL+PSKPR ILQD TV+  
Sbjct: 1   MKDCENHGH---SRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAF 60

Query: 63  NVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGHND 122
           NVS  PP  +++  Q+T+SS NPN++IG+YY  +DVYA YR QQ+T PT +PPTYQGH D
Sbjct: 61  NVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKD 120

Query: 123 VTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANC 182
           V IWSPF+YG +VP+AP    +L+ D + G +L  I+ +G+VRWKVG++I+G+Y L+  C
Sbjct: 121 VDIWSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKC 180

Query: 183 PAYIKFGDPKNGIAFGP-AMKFRFVQGCYVDI 214
           PAYI FG+  NG+  G  A+K+ F   C V +
Sbjct: 181 PAYINFGNKANGVIVGDNAVKYTFTTSCSVSV 209

[Close]

BLAST of CmoCh13G003670 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.0e-47
Identity = 95/214 (44.39%), Postives = 136/214 (63.55%), Query Frame = 0


Query: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60
           MT KDC +H            RI   I   I+++ + IFL+W IL+P+KPR ILQD TV+
Sbjct: 1   MTTKDCGNHGGG--GGGGTASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVY 60

Query: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120
             N+S   P  +++  Q+TI+S N NSRIG+YY  + VYA YR QQ+TL T +PPTYQGH
Sbjct: 61  AFNLSQ--PNLLTSNFQITIASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGH 120

Query: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180
            +  +WSPF+YG +VP+AP  A AL ++ N G +   I+ +G+VRWKVG+ I+G+Y L+ 
Sbjct: 121 KEDNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHV 180

Query: 181 NCPAYIKFGDPKNGIAFGP-AMKFRFVQGCYVDI 214
            C A+I   D   G+  G  A+K+  +  C V++
Sbjct: 181 RCQAFINLADKAAGVHVGENAVKYMLINKCSVNV 210

[Close]

BLAST of CmoCh13G003670 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.4e-35
Identity = 65/183 (35.52%), Postives = 113/183 (61.75%), Query Frame = 0


Query: 13  HCERR------RLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVFGLNVSS 72
           HC ++        ++++     T    + L+IFL+W IL P +P   L +  ++ LN+++
Sbjct: 11  HCAKKGGININNRHKKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTEADIYSLNLTT 70

Query: 73  VPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGHNDVTIW 132
                +++++Q+T+ S NPN ++G+YY  + VYAAYRGQQ+T    LPP YQ H ++ + 
Sbjct: 71  SSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLL 130

Query: 133 SPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANCPAYI 190
           + FL G  +PVA  F   ++ + + G ++  +K++G++RWK+G+W+SG YR N NC A +
Sbjct: 131 TAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAIV 190

[Close]

BLAST of CmoCh13G003670 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10
Identity = 42/157 (26.75%), Postives = 80/157 (50.96%), Query Frame = 0


Query: 27  IFTVILLISLVIFLIWAILRPSKPRLILQDVTVFGLNVSSVPPAAISTTMQVTISSHNPN 86
           I ++I+++ +   + W I+RP   +  + D ++   + +S P   +   + +T+   NPN
Sbjct: 45  IISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTS-PDNILRYNLALTVPVRNPN 104

Query: 87  SRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGHNDVTIWSPFLYGEAVPV-APEFAEAL 146
            RIG+YY  ++ +A Y G++ +  T L P YQGH + T+ +P   G+ + +     +  L
Sbjct: 105 KRIGLYYDRIEAHAYYEGKRFSTIT-LTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTL 164

Query: 147 NEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANC 183
           N +   G     IK   +VR+K+G     R +   +C
Sbjct: 165 NAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDC 199

[Close]

BLAST of CmoCh13G003670 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.8e-10
Identity = 42/157 (26.75%), Postives = 76/157 (48.41%), Query Frame = 0


Query: 26  AIFTVILLISLVIFLIWAILRPSKPRLILQDVTVFGLNVSSVPPAAISTTMQVTISSHNP 85
           A+F +I+L  +   +++ I RP  P+  ++  +V G+N++S  P  IS +  VT+ S N 
Sbjct: 81  AVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSP--ISPSFNVTVRSRNG 140

Query: 86  NSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGHNDVTIWSPFLYGEAVPVAPEFAEAL 145
           N +IGVYY+       Y         ++P  YQ   +VT+    L G  + +     + +
Sbjct: 141 NGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEM 200

Query: 146 NEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANC 183
             + +   + F +KI   V+ K GS  +    +N +C
Sbjct: 201 RNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDC 235

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BLAST of CmoCh13G003670 vs. ExPASy TrEMBL
Match: A0A6J1ENV2 (NDR1/HIN1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111434247 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.7e-120
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF
Sbjct: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180
           NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 214
           NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

[Close]

BLAST of CmoCh13G003670 vs. ExPASy TrEMBL
Match: A0A6J1IAN4 (NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111471672 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 2.6e-118
Identity = 210/213 (98.59%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHH CERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180
           NDVT+WSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWIS RYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISDRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 214
           NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

[Close]

BLAST of CmoCh13G003670 vs. ExPASy TrEMBL
Match: A0A0A0LVW5 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169420 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.0e-116
Identity = 201/213 (94.37%), Postives = 209/213 (98.12%), Query Frame = 0


Query: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHH CERRRLYRRIAC IFTV+LLI LVIFLIWAILRPSKPRLILQDVT+ 
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60

Query: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNVSSVPPAAISTTMQ+TISSHNPN+RIGVYYQ+MDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQITISSHNPNNRIGVYYQVMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180
           NDVT+WSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIK+NGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 214
           NCPAYIKFGDPKNGIAFGPAMKF+FVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 213

[Close]

BLAST of CmoCh13G003670 vs. ExPASy TrEMBL
Match: A0A5D3E518 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001850 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.7e-114
Identity = 198/213 (92.96%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHH CERRRLYRRIAC IF+++LLI LVIFLIWAILRPSKPRLILQDVT+ 
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFSLLLLIGLVIFLIWAILRPSKPRLILQDVTLL 60

Query: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNVSSVPPAAISTTMQ+TISSHNPN+RIGVYYQ+MDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQITISSHNPNTRIGVYYQVMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180
           NDVT+WSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIK+NGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 214
           NCPAYIKFGDPKNGIAFGP MKF+FVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPTMKFQFVQGCYVDI 213

[Close]

BLAST of CmoCh13G003670 vs. ExPASy TrEMBL
Match: A0A1S3CJQ5 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103501736 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.7e-114
Identity = 198/213 (92.96%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHH CERRRLYRRIAC IF+++LLI LVIFLIWAILRPSKPRLILQDVT+ 
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFSLLLLIGLVIFLIWAILRPSKPRLILQDVTLL 60

Query: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNVSSVPPAAISTTMQ+TISSHNPN+RIGVYYQ+MDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQITISSHNPNTRIGVYYQVMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180
           NDVT+WSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIK+NGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 214
           NCPAYIKFGDPKNGIAFGP MKF+FVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPTMKFQFVQGCYVDI 213

[Close]

BLAST of CmoCh13G003670 vs. NCBI nr
Match: XP_022927415.1 (NDR1/HIN1-like protein 1 [Cucurbita moschata])

HSP 1 Score: 441.0 bits (1133), Expect = 5.7e-120
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF
Sbjct: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180
           NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 214
           NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

[Close]

BLAST of CmoCh13G003670 vs. NCBI nr
Match: KAG7019347.1 (NDR1/HIN1-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 436.4 bits (1121), Expect = 1.4e-118
Identity = 210/213 (98.59%), Postives = 212/213 (99.53%), Query Frame = 0


Query: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHH CERRRLYRRIACAIFTV+LLISLVIFLIWAILRPSKPRLILQDVTVF
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180
           NDVT+WSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 214
           NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

[Close]

BLAST of CmoCh13G003670 vs. NCBI nr
Match: XP_022973165.1 (NDR1/HIN1-like protein 1 [Cucurbita maxima])

HSP 1 Score: 434.5 bits (1116), Expect = 5.3e-118
Identity = 210/213 (98.59%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHH CERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180
           NDVT+WSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWIS RYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISDRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 214
           NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

[Close]

BLAST of CmoCh13G003670 vs. NCBI nr
Match: XP_023520711.1 (NDR1/HIN1-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 432.2 bits (1110), Expect = 2.6e-117
Identity = 208/213 (97.65%), Postives = 210/213 (98.59%), Query Frame = 0


Query: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHH CERRRLYRRIACAIFTV+LLISLVIFLIWAILRPSKPRLILQDVTVF
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNVSSVPPAAIS TMQVTISSHNPNSRIGVYYQ MDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISITMQVTISSHNPNSRIGVYYQTMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180
           NDVT+WSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 214
           NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

[Close]

BLAST of CmoCh13G003670 vs. NCBI nr
Match: KAG6583699.1 (NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 424.9 bits (1091), Expect = 4.2e-115
Identity = 206/211 (97.63%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHH CERRRLYRRIACAIFTV+LLISLVIFLIWAILRPSKPRLILQDVTVF
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180
           NDVT+WSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYV 212
           NCPAYIKFGDPKNGIAFGPAMKFRFVQG  V
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGTAV 211

[Close]

BLAST of CmoCh13G003670 vs. TAIR 10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 239.2 bits (609), Expect = 3.1e-63
Identity = 114/213 (53.52%), Postives = 151/213 (70.89%), Query Frame = 0


Query: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60
           MT K+C+HHH    E  ++ +RI   +   +  +  V+FL+WAIL P  PR +LQD T++
Sbjct: 1   MTEKECEHHHD---EDEKMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIY 60

Query: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120
             NVS   P  +++ +QVT+SS NPN +IG++Y  +D+YA+YR QQVTL TLLP TYQGH
Sbjct: 61  AFNVSQ--PNYLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGH 120

Query: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180
            DVTIWSPFLYG  VPVAP F+ AL++D   G +L NIKI+G VRWKVG+W+SGRYRL+ 
Sbjct: 121 LDVTIWSPFLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHV 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 214
           NCPAYI      +G   GPA+K++ VQ C VD+
Sbjct: 181 NCPAYITLAGHFSG--DGPAVKYQLVQRCAVDV 206

[Close]

BLAST of CmoCh13G003670 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 235.7 bits (600), Expect = 3.4e-62
Identity = 111/212 (52.36%), Postives = 151/212 (71.23%), Query Frame = 0


Query: 3   VKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVFGL 62
           +KDC++H H    RR+L RRI  +I  V+ +I L I LIWAIL+PSKPR ILQD TV+  
Sbjct: 1   MKDCENHGH---SRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAF 60

Query: 63  NVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGHND 122
           NVS  PP  +++  Q+T+SS NPN++IG+YY  +DVYA YR QQ+T PT +PPTYQGH D
Sbjct: 61  NVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKD 120

Query: 123 VTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANC 182
           V IWSPF+YG +VP+AP    +L+ D + G +L  I+ +G+VRWKVG++I+G+Y L+  C
Sbjct: 121 VDIWSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKC 180

Query: 183 PAYIKFGDPKNGIAFGP-AMKFRFVQGCYVDI 214
           PAYI FG+  NG+  G  A+K+ F   C V +
Sbjct: 181 PAYINFGNKANGVIVGDNAVKYTFTTSCSVSV 209

[Close]

BLAST of CmoCh13G003670 vs. TAIR 10
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 226.9 bits (577), Expect = 1.6e-59
Identity = 114/214 (53.27%), Postives = 148/214 (69.16%), Query Frame = 0


Query: 1   MTVKDCDHHHHHHCER-RRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTV 60
           MT + CD H+ +   R R + RRIA A   +I+ ++ V+FL+WAIL P  PR +LQDVT+
Sbjct: 1   MTGRYCDQHNGYEERRMRMMMRRIAWACLGLIVAVAFVVFLVWAILHPHGPRFVLQDVTI 60

Query: 61  FGLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQG 120
              NVS   P  +S+ +QVT+SS NPN +IG++Y  +D+Y  YR Q+VTL  LLP TYQG
Sbjct: 61  NDFNVSQ--PNFLSSNLQVTVSSRNPNDKIGIFYDRLDIYVTYRNQEVTLARLLPSTYQG 120

Query: 121 HNDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLN 180
           H +VT+WSPFL G AVPVAP  + ALNED   G +L NIKI+G VRWKVGSW+SG YRL+
Sbjct: 121 HLEVTVWSPFLIGSAVPVAPYLSSALNEDLFAGLVLLNIKIDGWVRWKVGSWVSGSYRLH 180

Query: 181 ANCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 214
            NCPA+I       G   GPA+K++ VQ C VD+
Sbjct: 181 VNCPAFITVTGKLTGT--GPAIKYQLVQRCAVDV 210

[Close]

BLAST of CmoCh13G003670 vs. TAIR 10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 204.5 bits (519), Expect = 8.3e-53
Identity = 100/213 (46.95%), Postives = 142/213 (66.67%), Query Frame = 0


Query: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60
           MT KDC  H  H    R++   +   I  ++LLI +VI L+WAIL+PSKPR +LQD TVF
Sbjct: 1   MTSKDCGSHDSHSSCNRKI---VIWTISIILLLILVVILLVWAILQPSKPRFVLQDATVF 60

Query: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120
             NVS  PP  +++  Q T+SS NPN +IG+YY  +DVYA+YR QQ+TLP+ +  TYQGH
Sbjct: 61  NFNVSGNPPNLLTSNFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGH 120

Query: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180
            +V +WSPF+ G +VPVAP  A  L++D++ GA++  + ++G+VRWKVGS+I+G+Y L+ 
Sbjct: 121 KEVNVWSPFVGGYSVPVAPYNAFYLDQDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHV 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 214
            C A I FG    G+  G   K+   + C V +
Sbjct: 181 RCHALINFGSSAAGVIVG---KYMLTETCSVSV 207

[Close]

BLAST of CmoCh13G003670 vs. TAIR 10
Match: AT3G52470.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 190.7 bits (483), Expect = 1.2e-48
Identity = 92/211 (43.60%), Postives = 137/211 (64.93%), Query Frame = 0


Query: 4   KDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVFGLN 63
           KDC +H      +  + R++  AI   I+++ + IFL+W ILRP+KPR +LQD TV+  N
Sbjct: 3   KDCGNHGG---GKEVVVRKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFN 62

Query: 64  VSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGHNDV 123
           +S   P  +++  QVTI+S NPNS+IG+YY  + VYA Y  QQ+TL T +PPTYQGH +V
Sbjct: 63  LSQ--PNLLTSNFQVTIASRNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEV 122

Query: 124 TIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANCP 183
            +WSPF+YG AVP+AP  + AL E+ + G +   I+ +G VRWKV + I+G+Y ++  C 
Sbjct: 123 NVWSPFVYGTAVPIAPYNSVALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQ 182

Query: 184 AYIKFGDPKNGIAFGP-AMKFRFVQGCYVDI 214
           A+I  G+   G+  G  A+K+     C V++
Sbjct: 183 AFINLGNKAAGVLVGDNAVKYTLANKCSVNV 208

The following BLAST results are available for this feature:

BLAST of CmoCh13G003670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRN0	4.7e-61	52.36	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9SJ54	3.0e-47	44.39	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9FI03	3.4e-35	35.52	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9SJ52	1.0e-10	26.75	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9ZVD2	3.8e-10	26.75	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]

BLAST of CmoCh13G003670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENV2	2.7e-120	100.00	NDR1/HIN1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111434247 PE=4 SV=1	[more]
A0A6J1IAN4	2.6e-118	98.59	NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111471672 PE=4 SV=1	[more]
A0A0A0LVW5	7.0e-116	94.37	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169420 PE=4 ...	[more]
A0A5D3E518	1.7e-114	92.96	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CJQ5	1.7e-114	92.96	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103501736 PE=4 SV=1	[more]

BLAST of CmoCh13G003670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927415.1	5.7e-120	100.00	NDR1/HIN1-like protein 1 [Cucurbita moschata]	[more]
KAG7019347.1	1.4e-118	98.59	NDR1/HIN1-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022973165.1	5.3e-118	98.59	NDR1/HIN1-like protein 1 [Cucurbita maxima]	[more]
XP_023520711.1	2.6e-117	97.65	NDR1/HIN1-like protein 1 [Cucurbita pepo subsp. pepo]	[more]
KAG6583699.1	4.2e-115	97.63	NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh13G003670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44220.1	3.1e-63	53.52	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	3.4e-62	52.36	NDR1/HIN1-like 1	[more]
AT5G22200.1	1.6e-59	53.27	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06330.1	8.3e-53	46.95	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G52470.1	1.2e-48	43.60	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 79..182 e-value: 1.7E-10 score: 41.4
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 11..213
None	No IPR available	PANTHER	PTHR31415:SF117	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 11..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G003670.1	CmoCh13G003670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma