CmoCh13G003620 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G003620
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Mitochondrial transcription termination factor family protein
Location	Cmo_Chr13: 4630340 .. 4631825 (+)
RNA-Seq Expression	CmoCh13G003620
Synteny	CmoCh13G003620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCCTCCTATTCTTTCCGGCTGCCATTCTCTCATAATCCCCTTCCCGCCGCTCGCTGTCACTCCTCCGACTCCCATTTTCCCCCTTCCCCGCCGCTCGCTGCCACTCCTCCGCCTCCCGTTTTCATTATTCGTTACTCTTGCGAGGCATTCGTGTTTCTCTGATTCGTCTTCTCAAGAGGAAGCAGGTTTTCTTTCCCCTCGCGTTTTCACAGTCATGTTGTTGCTTCGTCGGATCATTATAGTCAGGCAGCCATCATCAGTCTTTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTCATCGACTTCTTCTGAGATCGCATCATCTCCAAAATCTGCATCGCCGGATTCTAATTCTGTCAGGCCAGAGAACGATGAGAAGCCTGTAATCGTGCTCTTTGAGAATCATGGATTCTCAAAAACACAGATCTCTGAGCTTGTCAAGAAATTCCCTCAAGTTCTTTCAGCGAACCCCGAAAAGACGCTATTGCCAAAATTGTTGTTCTTTCAATCGAAAGGCCTTTCTTCCCCCGAGATTGCCAAATTAGTGTGTGGTTTTCCTTCGATTTTAACGCGAAGTTTAGACAGAAAAATCATTCCAGCTTTTGATTACATTCAAGTGCTACTTCAAACTAAGGAGAAGGCTATCGCATCCATAAAACGGTCTTTAGGTATTCTCACTTGGGATCTCCAAACTGTTCGTCCCAATGTTGAAACTCTAATACAAATTGGAGTTCCTGATTCCAACATTGCAACCATTCTTCAGTACCAACCACGAGTGTTCTTGGTAAACACCGTCCGATTCAAGGAGATTGTGGAGGACGTTAAGGAAATGGGATTCAACCCTCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTATGCGAGCAATGAGCAAATGTACATGGAGAAAAAAAGTTGAAGTTTACAAGAAATGGGGATGGCCTGAAGAAGAGATTCTCGTCGCTTTTCGAAGGCATCCATGGTGCATGATGGCTTCGGAGGACAAGATCAATGGCATAATGGATTTCTTTGTGAACAAGATTGGATGTGAAACTTCATACGTTGCAAAGCGACCTGCTGTGATTACACTTAGTTTAAAGAAGAGGATTGTGCCAAGAGGCTTTGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAGATGTGAATCTTCCTATGGTGTTCGAGTCTACTGAAAGCCGATTCTTAGACAAATTCATCGACCCTCATAAGGAGCTGATTCCTGGATTGTTGAAGTTGTATAAAGAGAAATTGGAGGATGCTAAGAGATAGCAGGTTCAATCTCCTTCTCTAAATGTTAATATTTACCTGTTTTGCTTGTTCATATGTCTATTCATATCTAAAATTGATGTATGTTCAAGAGCTTGTGCTGAATTGGCTGCTATTTAGATTGTTAACTAAATGATGGTTTGAGCTGAATTGACTATAGCACGTTGTAAGTGGAGTCTGA

mRNA sequence

CCGCCTCCTATTCTTTCCGGCTGCCATTCTCTCATAATCCCCTTCCCGCCGCTCGCTGTCACTCCTCCGACTCCCATTTTCCCCCTTCCCCGCCGCTCGCTGCCACTCCTCCGCCTCCCGTTTTCATTATTCGTTACTCTTGCGAGGCATTCGTGTTTCTCTGATTCGTCTTCTCAAGAGGAAGCAGGTTTTCTTTCCCCTCGCGTTTTCACAGTCATGTTGTTGCTTCGTCGGATCATTATAGTCAGGCAGCCATCATCAGTCTTTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTCATCGACTTCTTCTGAGATCGCATCATCTCCAAAATCTGCATCGCCGGATTCTAATTCTGTCAGGCCAGAGAACGATGAGAAGCCTGTAATCGTGCTCTTTGAGAATCATGGATTCTCAAAAACACAGATCTCTGAGCTTGTCAAGAAATTCCCTCAAGTTCTTTCAGCGAACCCCGAAAAGACGCTATTGCCAAAATTGTTGTTCTTTCAATCGAAAGGCCTTTCTTCCCCCGAGATTGCCAAATTAGTGTGTGGTTTTCCTTCGATTTTAACGCGAAGTTTAGACAGAAAAATCATTCCAGCTTTTGATTACATTCAAGTGCTACTTCAAACTAAGGAGAAGGCTATCGCATCCATAAAACGGTCTTTAGGTATTCTCACTTGGGATCTCCAAACTGTTCGTCCCAATGTTGAAACTCTAATACAAATTGGAGTTCCTGATTCCAACATTGCAACCATTCTTCAGTACCAACCACGAGTGTTCTTGGTAAACACCGTCCGATTCAAGGAGATTGTGGAGGACGTTAAGGAAATGGGATTCAACCCTCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTATGCGAGCAATGAGCAAATGTACATGGAGAAAAAAAGTTGAAGTTTACAAGAAATGGGGATGGCCTGAAGAAGAGATTCTCGTCGCTTTTCGAAGGCATCCATGGTGCATGATGGCTTCGGAGGACAAGATCAATGGCATAATGGATTTCTTTGTGAACAAGATTGGATGTGAAACTTCATACGTTGCAAAGCGACCTGCTGTGATTACACTTAGTTTAAAGAAGAGGATTGTGCCAAGAGGCTTTGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAGATGTGAATCTTCCTATGGTGTTCGAGTCTACTGAAAGCCGATTCTTAGACAAATTCATCGACCCTCATAAGGAGCTGATTCCTGGATTGTTGAAGTTGTATAAAGAGAAATTGGAGGATGCTAAGAGATAGCACGTTGTAAGTGGAGTCTGA

Coding sequence (CDS)

ATGTTGTTGCTTCGTCGGATCATTATAGTCAGGCAGCCATCATCAGTCTTTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTCATCGACTTCTTCTGAGATCGCATCATCTCCAAAATCTGCATCGCCGGATTCTAATTCTGTCAGGCCAGAGAACGATGAGAAGCCTGTAATCGTGCTCTTTGAGAATCATGGATTCTCAAAAACACAGATCTCTGAGCTTGTCAAGAAATTCCCTCAAGTTCTTTCAGCGAACCCCGAAAAGACGCTATTGCCAAAATTGTTGTTCTTTCAATCGAAAGGCCTTTCTTCCCCCGAGATTGCCAAATTAGTGTGTGGTTTTCCTTCGATTTTAACGCGAAGTTTAGACAGAAAAATCATTCCAGCTTTTGATTACATTCAAGTGCTACTTCAAACTAAGGAGAAGGCTATCGCATCCATAAAACGGTCTTTAGGTATTCTCACTTGGGATCTCCAAACTGTTCGTCCCAATGTTGAAACTCTAATACAAATTGGAGTTCCTGATTCCAACATTGCAACCATTCTTCAGTACCAACCACGAGTGTTCTTGGTAAACACCGTCCGATTCAAGGAGATTGTGGAGGACGTTAAGGAAATGGGATTCAACCCTCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTATGCGAGCAATGAGCAAATGTACATGGAGAAAAAAAGTTGAAGTTTACAAGAAATGGGGATGGCCTGAAGAAGAGATTCTCGTCGCTTTTCGAAGGCATCCATGGTGCATGATGGCTTCGGAGGACAAGATCAATGGCATAATGGATTTCTTTGTGAACAAGATTGGATGTGAAACTTCATACGTTGCAAAGCGACCTGCTGTGATTACACTTAGTTTAAAGAAGAGGATTGTGCCAAGAGGCTTTGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAGATGTGAATCTTCCTATGGTGTTCGAGTCTACTGAAAGCCGATTCTTAGACAAATTCATCGACCCTCATAAGGAGCTGATTCCTGGATTGTTGAAGTTGTATAAAGAGAAATTGGAGGATGCTAAGAGATAG

Protein sequence

MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKPVIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTVRPNVETLIQIGVPDSNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEVYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKKRIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLEDAKR

Homology

[Close]

BLAST of CmoCh13G003620 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-06
Identity = 34/137 (24.82%), Postives = 70/137 (51.09%), Query Frame = 0


Query: 57  DEKPVIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVC 116
           D  PV+   +      + +  +++++P+VL    E T+   + +    G++  EI  ++ 
Sbjct: 214 DLAPVVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILT 273

Query: 117 GFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDL-QTVRPNVETLIQI 176
            +P IL   + R I P  +Y++VL   +  A   I++   IL ++L  TV+PNV+ L   
Sbjct: 274 RYPEILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDF 333

Query: 177 GVPDSNIATILQYQPRV 193
            V ++++ +I+   P +
Sbjct: 334 NVRETSLPSIIAQYPEI 350

[Close]

BLAST of CmoCh13G003620 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.6e-06
Identity = 51/270 (18.89%), Postives = 117/270 (43.33%), Query Frame = 0


Query: 57  DEKPVIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVC 116
           D  PV+   +      T +  +++++P++L    E T+   + +    G+   ++  ++ 
Sbjct: 170 DLAPVVKYLQGMDVRPTDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQVGSVIT 229

Query: 117 GFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQ-TVRPNVETLIQI 176
            FP +L   + + I P  ++++ +   +      I++   +L + LQ  V+PN+E L+ I
Sbjct: 230 RFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPNIEALVDI 289

Query: 177 GVPDSNIATILQYQPRVFLVNTVRFKEIVED--------VKEMGFNPLRLKFVLAVFAMR 236
           GV    +A+I+   P V L   +R K + +         V    F  +  +   A+    
Sbjct: 290 GVRKEALASIVMQYPDV-LGLELRDKLVAQQSLFESSILVSREDFGRVLERMPQAI---- 349

Query: 237 AMSKCTWRKKVEVYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYV 296
           ++ +    K V      G+   ++       P  +  + D +    ++F N++  +   +
Sbjct: 350 SLGRAAVLKHVNFLTACGFMLSQVSKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEEL 409

Query: 297 AKRPAVITLSLKKRIVPRGFVYQVLLSKGL 318
            + PA  T  ++  + PR   ++++  KGL
Sbjct: 410 VEFPAFFTYGIESTVRPR---HEMVSRKGL 431

[Close]

BLAST of CmoCh13G003620 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 8.2e-05
Identity = 39/174 (22.41%), Postives = 88/174 (50.57%), Query Frame = 0


Query: 44  SASPDSNSVRPENDEKPVIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQS 103
           S  P   ++R +    P++    + G +  +++  + KFP +LS + E+ L P L FFQ+
Sbjct: 64  SRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQA 123

Query: 104 KGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASI-KRSLGILTWDL 163
            G+   ++ K++   P +++ S+D K+     ++  L   ++  I  +  ++  ++ + +
Sbjct: 124 LGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSV 183

Query: 164 -QTVRPNVETL-IQIGVPDSNIATILQYQPRVFL--VNTVRFKEIVEDVKEMGF 213
            + +RP  E L   +G+ +  I +++   P++    VN +  K   + +KE GF
Sbjct: 184 DKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKI-LKPNYDYLKECGF 236

[Close]

BLAST of CmoCh13G003620 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-04
Identity = 45/202 (22.28%), Postives = 82/202 (40.59%), Query Frame = 0


Query: 17  FAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKPVIVLFENHGFSKTQIS 76
           F+    E  +  L+    S+E      +  P       E   KP++  F   G  K  + 
Sbjct: 347 FSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMK 406

Query: 77  ELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDY 136
            ++   P +   + EKT+ PK+ F Q  G+ +  I  ++  FPS+LT SL +KI P   +
Sbjct: 407 RILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIF 466

Query: 137 IQVLLQTKEKAIAS-IKRSLGILTWDLQT-VRPNVETLIQIGVPDSNIATILQYQPRVFL 196
           +       +K I   I     +L   + T + PN+   I +G+    +  ++   P +  
Sbjct: 467 LLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLR 526

Query: 197 VNTVRFKEIVEDVKEMGFNPLR 217
            N    +     ++     PL+
Sbjct: 527 YNVDNLRPKYRYLRRTMIRPLQ 548

[Close]

BLAST of CmoCh13G003620 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-04
Identity = 44/264 (16.67%), Postives = 110/264 (41.67%), Query Frame = 0


Query: 57  DEKPVIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVC 116
           D  PV+   +        +  +++++P++L    E T+   + +    G++  ++  ++ 
Sbjct: 179 DLAPVVKYLQGMDVRPHDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARRQVGSVIT 238

Query: 117 GFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQ-TVRPNVETLIQI 176
            FP +L   + + I P  ++++ +   +      I++   +L + L+  V+PN+E L++ 
Sbjct: 239 RFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLEDKVKPNIEALLEF 298

Query: 177 GVPDSNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMR---AMSKC 236
           GV    +A I+   P +  +         + + E         F   +  M    ++ + 
Sbjct: 299 GVRKEALAFIVAQYPDILGIELRDKLATQQSLFESSILVSSEDFGRVIERMPQAISLGRT 358

Query: 237 TWRKKVEVYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPA 296
              K V      G+   ++       P  +  + D +    ++F N++  +   + + PA
Sbjct: 359 AVLKHVNFLTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERDLEELVEFPA 418

Query: 297 VITLSLKKRIVPRGFVYQVLLSKG 317
             T  L+  + PR   ++++  KG
Sbjct: 419 FFTYGLESTVRPR---HEMVAKKG 439

[Close]

BLAST of CmoCh13G003620 vs. ExPASy TrEMBL
Match: A0A6J1EK58 (uncharacterized protein LOC111434072 OS=Cucurbita moschata OX=3662 GN=LOC111434072 PE=3 SV=1)

HSP 1 Score: 708.0 bits (1826), Expect = 2.1e-200
Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0


Query: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP 60
           MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP
Sbjct: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP 60

Query: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120
           VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS
Sbjct: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120

Query: 121 ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTVRPNVETLIQIGVPDS 180
           ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTVRPNVETLIQIGVPDS
Sbjct: 121 ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTVRPNVETLIQIGVPDS 180

Query: 181 NIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEV 240
           NIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEV
Sbjct: 181 NIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEV 240

Query: 241 YKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKK 300
           YKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKK
Sbjct: 241 YKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKK 300

Query: 301 RIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLED 360
           RIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLED
Sbjct: 301 RIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLED 360

Query: 361 AKR 364
           AKR
Sbjct: 361 AKR 363

[Close]

BLAST of CmoCh13G003620 vs. ExPASy TrEMBL
Match: A0A6J1IAL8 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111471659 PE=3 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 1.7e-186
Identity = 338/363 (93.11%), Postives = 352/363 (96.97%), Query Frame = 0


Query: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP 60
           MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSS+IASSPKS S DS SV+PENDEKP
Sbjct: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSKIASSPKSTSLDSISVKPENDEKP 60

Query: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120
           V+VLFENHGFSKTQISELVKKFP+VLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS
Sbjct: 61  VMVLFENHGFSKTQISELVKKFPRVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120

Query: 121 ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTVRPNVETLIQIGVPDS 180
           ILTRSLDRKIIPAFDYIQ LLQT+EK IASIKRSLGILTWDLQTVRPNVETLIQIGVPDS
Sbjct: 121 ILTRSLDRKIIPAFDYIQALLQTEEKTIASIKRSLGILTWDLQTVRPNVETLIQIGVPDS 180

Query: 181 NIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEV 240
           NIATILQYQPRVFL+NTVRFKEIVE+VKEMGFNPLRLKFVLAVFA+RAMSK TWRKKVEV
Sbjct: 181 NIATILQYQPRVFLINTVRFKEIVEEVKEMGFNPLRLKFVLAVFALRAMSKSTWRKKVEV 240

Query: 241 YKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKK 300
           YKKWGWPEEEIL AFRRHPWCMMASEDKING+MDFFVNKIGCE SYVAKRPA+ITLSLKK
Sbjct: 241 YKKWGWPEEEILFAFRRHPWCMMASEDKINGVMDFFVNKIGCEPSYVAKRPALITLSLKK 300

Query: 301 RIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLED 360
           RI PRG+VYQVLLSKGLIKKDVNLP++FESTESRFL KFIDPHKELIP LLKLYK+KLED
Sbjct: 301 RIEPRGWVYQVLLSKGLIKKDVNLPLLFESTESRFLVKFIDPHKELIPRLLKLYKKKLED 360

Query: 361 AKR 364
           AKR
Sbjct: 361 AKR 363

[Close]

BLAST of CmoCh13G003620 vs. ExPASy TrEMBL
Match: A0A6J1GVP2 (uncharacterized protein LOC111457902 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457902 PE=3 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 1.0e-183
Identity = 334/364 (91.76%), Postives = 346/364 (95.05%), Query Frame = 0


Query: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP 60
           MLLLRRII+V +PSSVF HGFSESPLKSLRYSSTSSEIASSPKSASPDSNSV PENDEKP
Sbjct: 1   MLLLRRIIVVSRPSSVFVHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVEPENDEKP 60

Query: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120
           VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS
Sbjct: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120

Query: 121 ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQT-VRPNVETLIQIGVPD 180
           IL RSLDRKIIPAFDYIQ LLQT+EK IASIKR LGILTWDLQ   RPNVETLIQIGVPD
Sbjct: 121 ILMRSLDRKIIPAFDYIQELLQTEEKTIASIKRFLGILTWDLQIYARPNVETLIQIGVPD 180

Query: 181 SNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVE 240
           S IATIL+YQPRVFLVNTVRFKEIVE+VKEMGFNPLRL FVLAVFAMRAMSK TWRKKVE
Sbjct: 181 SKIATILEYQPRVFLVNTVRFKEIVEEVKEMGFNPLRLNFVLAVFAMRAMSKSTWRKKVE 240

Query: 241 VYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLK 300
           VYKKWGWPEEEIL AFRRHPWCMMASEDKING+MDFFVNKIGCE SY+AKRPA+I+LSLK
Sbjct: 241 VYKKWGWPEEEILSAFRRHPWCMMASEDKINGVMDFFVNKIGCEPSYIAKRPALISLSLK 300

Query: 301 KRIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLE 360
           KRIVPRG VYQVLLSKGLIKKDVNLP +FES E+RFLDKFIDPHKELIPGLLKLYKEKLE
Sbjct: 301 KRIVPRGSVYQVLLSKGLIKKDVNLPFLFESAENRFLDKFIDPHKELIPGLLKLYKEKLE 360

Query: 361 DAKR 364
           D+KR
Sbjct: 361 DSKR 364

[Close]

BLAST of CmoCh13G003620 vs. ExPASy TrEMBL
Match: A0A6J1EZH0 (uncharacterized protein LOC111440613 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440613 PE=3 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 3.9e-183
Identity = 333/364 (91.48%), Postives = 345/364 (94.78%), Query Frame = 0


Query: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP 60
           MLLLRRI +VRQPSSVFAHGFSESPLKSLRY STSSEIASSPKSASPDSN V+PENDEKP
Sbjct: 95  MLLLRRINVVRQPSSVFAHGFSESPLKSLRYLSTSSEIASSPKSASPDSNKVKPENDEKP 154

Query: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120
           VIV FENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS
Sbjct: 155 VIVFFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 214

Query: 121 ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQT-VRPNVETLIQIGVPD 180
           IL RSLDRKIIPAFDYIQ LLQT+EK IASIKR LGILTWDLQ   RPNVETLIQIGVPD
Sbjct: 215 ILMRSLDRKIIPAFDYIQELLQTEEKTIASIKRFLGILTWDLQIYARPNVETLIQIGVPD 274

Query: 181 SNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVE 240
           S IATIL+YQPRVFLVNTVRFKEIVE+VKEMGFNPLRL FVLAVFAMRAMSK TWRKKVE
Sbjct: 275 SKIATILEYQPRVFLVNTVRFKEIVEEVKEMGFNPLRLNFVLAVFAMRAMSKSTWRKKVE 334

Query: 241 VYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLK 300
           VYKKWGWPEEEIL AFRRHPWCMMASEDKING+MDFFVNKIGCE SY+AKRPA+I+LSLK
Sbjct: 335 VYKKWGWPEEEILSAFRRHPWCMMASEDKINGVMDFFVNKIGCEPSYIAKRPALISLSLK 394

Query: 301 KRIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLE 360
           KRIVPRG VYQVLLSKGLIKKDVNLP +FES E+RFLDKFIDPHKELIPGLLKLYKEKLE
Sbjct: 395 KRIVPRGSVYQVLLSKGLIKKDVNLPFLFESAENRFLDKFIDPHKELIPGLLKLYKEKLE 454

Query: 361 DAKR 364
           D+KR
Sbjct: 455 DSKR 458

[Close]

BLAST of CmoCh13G003620 vs. ExPASy TrEMBL
Match: A0A6J1F4G8 (uncharacterized protein LOC111440613 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440613 PE=3 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 3.9e-183
Identity = 333/364 (91.48%), Postives = 345/364 (94.78%), Query Frame = 0


Query: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP 60
           MLLLRRI +VRQPSSVFAHGFSESPLKSLRY STSSEIASSPKSASPDSN V+PENDEKP
Sbjct: 96  MLLLRRINVVRQPSSVFAHGFSESPLKSLRYLSTSSEIASSPKSASPDSNKVKPENDEKP 155

Query: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120
           VIV FENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS
Sbjct: 156 VIVFFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 215

Query: 121 ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQT-VRPNVETLIQIGVPD 180
           IL RSLDRKIIPAFDYIQ LLQT+EK IASIKR LGILTWDLQ   RPNVETLIQIGVPD
Sbjct: 216 ILMRSLDRKIIPAFDYIQELLQTEEKTIASIKRFLGILTWDLQIYARPNVETLIQIGVPD 275

Query: 181 SNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVE 240
           S IATIL+YQPRVFLVNTVRFKEIVE+VKEMGFNPLRL FVLAVFAMRAMSK TWRKKVE
Sbjct: 276 SKIATILEYQPRVFLVNTVRFKEIVEEVKEMGFNPLRLNFVLAVFAMRAMSKSTWRKKVE 335

Query: 241 VYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLK 300
           VYKKWGWPEEEIL AFRRHPWCMMASEDKING+MDFFVNKIGCE SY+AKRPA+I+LSLK
Sbjct: 336 VYKKWGWPEEEILSAFRRHPWCMMASEDKINGVMDFFVNKIGCEPSYIAKRPALISLSLK 395

Query: 301 KRIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLE 360
           KRIVPRG VYQVLLSKGLIKKDVNLP +FES E+RFLDKFIDPHKELIPGLLKLYKEKLE
Sbjct: 396 KRIVPRGSVYQVLLSKGLIKKDVNLPFLFESAENRFLDKFIDPHKELIPGLLKLYKEKLE 455

Query: 361 DAKR 364
           D+KR
Sbjct: 456 DSKR 459

[Close]

BLAST of CmoCh13G003620 vs. NCBI nr
Match: XP_022927133.1 (uncharacterized protein LOC111434072 [Cucurbita moschata])

HSP 1 Score: 708.0 bits (1826), Expect = 4.2e-200
Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0


Query: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP 60
           MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP
Sbjct: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP 60

Query: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120
           VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS
Sbjct: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120

Query: 121 ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTVRPNVETLIQIGVPDS 180
           ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTVRPNVETLIQIGVPDS
Sbjct: 121 ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTVRPNVETLIQIGVPDS 180

Query: 181 NIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEV 240
           NIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEV
Sbjct: 181 NIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEV 240

Query: 241 YKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKK 300
           YKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKK
Sbjct: 241 YKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKK 300

Query: 301 RIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLED 360
           RIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLED
Sbjct: 301 RIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLED 360

Query: 361 AKR 364
           AKR
Sbjct: 361 AKR 363

[Close]

BLAST of CmoCh13G003620 vs. NCBI nr
Match: KAG6583690.1 (hypothetical protein SDJN03_19622, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 696.0 bits (1795), Expect = 1.7e-196
Identity = 355/363 (97.80%), Postives = 362/363 (99.72%), Query Frame = 0


Query: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP 60
           MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP
Sbjct: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP 60

Query: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120
           VIVLFENHGFSKTQISELVKKFPQVLSANPEKTL+PKLLFFQSKGLSSPEIAKLVCGFPS
Sbjct: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLVPKLLFFQSKGLSSPEIAKLVCGFPS 120

Query: 121 ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTVRPNVETLIQIGVPDS 180
           ILTRSLDRKIIPAFDYIQ+LLQ+KEKAIASIKRSLGILTWDLQTVRPNVETLI+IGVPDS
Sbjct: 121 ILTRSLDRKIIPAFDYIQLLLQSKEKAIASIKRSLGILTWDLQTVRPNVETLIRIGVPDS 180

Query: 181 NIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEV 240
           NIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEV
Sbjct: 181 NIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEV 240

Query: 241 YKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKK 300
           YK+WGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKK
Sbjct: 241 YKRWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKK 300

Query: 301 RIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLED 360
           RIVPRGFVYQVLLSKGLIKKDVNLP+VFESTESRFL KFI+PHKELIPGLLKLYKEKLED
Sbjct: 301 RIVPRGFVYQVLLSKGLIKKDVNLPLVFESTESRFLGKFIEPHKELIPGLLKLYKEKLED 360

Query: 361 AKR 364
           AKR
Sbjct: 361 AKR 363

[Close]

BLAST of CmoCh13G003620 vs. NCBI nr
Match: XP_023520325.1 (uncharacterized protein LOC111783639 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 682.6 bits (1760), Expect = 1.9e-192
Identity = 350/363 (96.42%), Postives = 356/363 (98.07%), Query Frame = 0


Query: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP 60
           MLLLRRII+VRQ SSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPD NSV+PENDEKP
Sbjct: 1   MLLLRRIILVRQTSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDFNSVKPENDEKP 60

Query: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120
           VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFF+SKGLSSPEIAKLVCGFPS
Sbjct: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFESKGLSSPEIAKLVCGFPS 120

Query: 121 ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTVRPNVETLIQIGVPDS 180
           ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQT+RPNVETLIQIGVPDS
Sbjct: 121 ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTIRPNVETLIQIGVPDS 180

Query: 181 NIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEV 240
           NIATILQYQPRVFLVNTVRFKEIVE+VKEMGFNPLRLKFVLAVFAMRAMSK TWRKKVEV
Sbjct: 181 NIATILQYQPRVFLVNTVRFKEIVEEVKEMGFNPLRLKFVLAVFAMRAMSKSTWRKKVEV 240

Query: 241 YKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKK 300
           YKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCE  YVAKRPAVITLSLKK
Sbjct: 241 YKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCEPLYVAKRPAVITLSLKK 300

Query: 301 RIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLED 360
           RIVPRG VYQVLLSKGLIKKDVNLP+VFESTESRFL KFIDPHKELIPGLLKLYKEKLED
Sbjct: 301 RIVPRGVVYQVLLSKGLIKKDVNLPLVFESTESRFLGKFIDPHKELIPGLLKLYKEKLED 360

Query: 361 AKR 364
           AKR
Sbjct: 361 AKR 363

[Close]

BLAST of CmoCh13G003620 vs. NCBI nr
Match: XP_022973145.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 661.8 bits (1706), Expect = 3.5e-186
Identity = 338/363 (93.11%), Postives = 352/363 (96.97%), Query Frame = 0


Query: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP 60
           MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSS+IASSPKS S DS SV+PENDEKP
Sbjct: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSKIASSPKSTSLDSISVKPENDEKP 60

Query: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120
           V+VLFENHGFSKTQISELVKKFP+VLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS
Sbjct: 61  VMVLFENHGFSKTQISELVKKFPRVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120

Query: 121 ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTVRPNVETLIQIGVPDS 180
           ILTRSLDRKIIPAFDYIQ LLQT+EK IASIKRSLGILTWDLQTVRPNVETLIQIGVPDS
Sbjct: 121 ILTRSLDRKIIPAFDYIQALLQTEEKTIASIKRSLGILTWDLQTVRPNVETLIQIGVPDS 180

Query: 181 NIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEV 240
           NIATILQYQPRVFL+NTVRFKEIVE+VKEMGFNPLRLKFVLAVFA+RAMSK TWRKKVEV
Sbjct: 181 NIATILQYQPRVFLINTVRFKEIVEEVKEMGFNPLRLKFVLAVFALRAMSKSTWRKKVEV 240

Query: 241 YKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKK 300
           YKKWGWPEEEIL AFRRHPWCMMASEDKING+MDFFVNKIGCE SYVAKRPA+ITLSLKK
Sbjct: 241 YKKWGWPEEEILFAFRRHPWCMMASEDKINGVMDFFVNKIGCEPSYVAKRPALITLSLKK 300

Query: 301 RIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLED 360
           RI PRG+VYQVLLSKGLIKKDVNLP++FESTESRFL KFIDPHKELIP LLKLYK+KLED
Sbjct: 301 RIEPRGWVYQVLLSKGLIKKDVNLPLLFESTESRFLVKFIDPHKELIPRLLKLYKKKLED 360

Query: 361 AKR 364
           AKR
Sbjct: 361 AKR 363

[Close]

BLAST of CmoCh13G003620 vs. NCBI nr
Match: XP_022956116.1 (uncharacterized protein LOC111457902 isoform X2 [Cucurbita moschata])

HSP 1 Score: 652.5 bits (1682), Expect = 2.1e-183
Identity = 334/364 (91.76%), Postives = 346/364 (95.05%), Query Frame = 0


Query: 1   MLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP 60
           MLLLRRII+V +PSSVF HGFSESPLKSLRYSSTSSEIASSPKSASPDSNSV PENDEKP
Sbjct: 1   MLLLRRIIVVSRPSSVFVHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVEPENDEKP 60

Query: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120
           VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS
Sbjct: 61  VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPS 120

Query: 121 ILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQT-VRPNVETLIQIGVPD 180
           IL RSLDRKIIPAFDYIQ LLQT+EK IASIKR LGILTWDLQ   RPNVETLIQIGVPD
Sbjct: 121 ILMRSLDRKIIPAFDYIQELLQTEEKTIASIKRFLGILTWDLQIYARPNVETLIQIGVPD 180

Query: 181 SNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVE 240
           S IATIL+YQPRVFLVNTVRFKEIVE+VKEMGFNPLRL FVLAVFAMRAMSK TWRKKVE
Sbjct: 181 SKIATILEYQPRVFLVNTVRFKEIVEEVKEMGFNPLRLNFVLAVFAMRAMSKSTWRKKVE 240

Query: 241 VYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLK 300
           VYKKWGWPEEEIL AFRRHPWCMMASEDKING+MDFFVNKIGCE SY+AKRPA+I+LSLK
Sbjct: 241 VYKKWGWPEEEILSAFRRHPWCMMASEDKINGVMDFFVNKIGCEPSYIAKRPALISLSLK 300

Query: 301 KRIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLE 360
           KRIVPRG VYQVLLSKGLIKKDVNLP +FES E+RFLDKFIDPHKELIPGLLKLYKEKLE
Sbjct: 301 KRIVPRGSVYQVLLSKGLIKKDVNLPFLFESAENRFLDKFIDPHKELIPGLLKLYKEKLE 360

Query: 361 DAKR 364
           D+KR
Sbjct: 361 DSKR 364

[Close]

BLAST of CmoCh13G003620 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 236.1 bits (601), Expect = 4.4e-62
Identity = 126/318 (39.62%), Postives = 200/318 (62.89%), Query Frame = 0


Query: 41  SPKSASPDSNSVRPENDEKP--VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKL 100
           SP SA+  S  +  ++ E+P  V+ L  +HGF+  QIS LVKK P +L AN E  LLPKL
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 101 LFFQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGIL 160
            FF S G+S   +A+ +   P+ILTRSL  ++IP++++++ +L + EK +A+++R+  + 
Sbjct: 142 SFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVF 201

Query: 161 TWD-LQTVRPNVETLIQIGVPDSNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRL 220
             D  + + PN+  + + GVP+  I  +L + P   +     F+ I +  +EMGFNP + 
Sbjct: 202 LEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 221 KFVLAVFAMRAM-SKCTWRKKVEVYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFF 280
            FVLA+ A+    +K  W K  EVY++WGW E++I+ AF++HP CMM SE KIN  M++F
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 281 VNKIGCETSYVAKRPAVITLSLKKRIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFL 340
           VN++      +A+ P V+  SL+KRI+PR  V +VL+S GL+K+D +L  +    E  FL
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

Query: 341 DKFIDPHKELIPGLLKLY 355
           +K +  ++E +P L+ LY
Sbjct: 382 EKLVIKYEEELPELMNLY 399

[Close]

BLAST of CmoCh13G003620 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 203.4 bits (516), Expect = 3.2e-52
Identity = 112/331 (33.84%), Postives = 193/331 (58.31%), Query Frame = 0


Query: 26  LKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP--VIVLFENHGFSKTQISELVKKFP 85
           L+S   S        S +SA  +S  V+  + +KP  V+ LF++HGF+  QI+ ++K FP
Sbjct: 54  LESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFP 113

Query: 86  QVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQT 145
           +VLS +PE  + PKL+FF S G S+ + AK++   P +L+ SL +++IP +D ++ +L  
Sbjct: 114 RVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVE 173

Query: 146 KEKAIASIKRSLGILTWDL-QTVRPNVETLIQIGVPDSNIATILQYQPRVFLVNTVRFKE 205
           +E  +  +KR +   +  +   V   V    ++GVPD +I  ++Q  P  F     RF E
Sbjct: 174 EESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNE 233

Query: 206 IVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEVYKKWGWPEEEILVAFRRHPWCM 265
           ++  V   GF+P +  FV A+ A    S+    +K ++++ +GW +E+ + A  R P C+
Sbjct: 234 VLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCV 293

Query: 266 MASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKKRIVPRGFVYQVLLSKGLIKK-D 325
             S++KI   +++ VN IG +   +  RP V++LS++KRI PR  V  +LLSKGL+KK D
Sbjct: 294 TVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKED 353

Query: 326 VNLPMVFESTESRFLDKFIDPHKELIPGLLK 353
           +N   + +   S F+DKF+  +++ +P L++
Sbjct: 354 INYFTILKLKSSEFMDKFVLKYQDEMPQLVQ 384

[Close]

BLAST of CmoCh13G003620 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 154.1 bits (388), Expect = 2.2e-37
Identity = 96/305 (31.48%), Postives = 171/305 (56.07%), Query Frame = 0


Query: 59  KPVIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGF 118
           + VI + +++ FS TQI + ++  P+++  N EK L PKL FF+  G +   + K V   
Sbjct: 72  RSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQN 131

Query: 119 PSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLG--ILTWDLQT-VRPNVETLIQI 178
            S++  SL +K+IP  + ++ ++  K + +  I    G  +L+ D    + PN+  L   
Sbjct: 132 SSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETC 191

Query: 179 GVPDSNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWR 238
           G+  S +A++L+ QPR+F ++  + +  V    ++GF       V AV ++ ++S+ T+ 
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251

Query: 239 KKVEVYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVIT 298
           +KV+++   G+ E+EI    RR P  +  SEDK+    +F++ ++G E   +AKRP V++
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311

Query: 299 LSLKKRIVPRGFVYQVLLSKGLI----KKDVNLPMVFESTESRFLDKFIDPH-KELIPGL 356
            +L+KR++PR  V Q+L  KGL+    KK  N+  + E TE  FL+K++     E+   L
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEEL 371

[Close]

BLAST of CmoCh13G003620 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 144.1 bits (362), Expect = 2.3e-34
Identity = 104/345 (30.14%), Postives = 175/345 (50.72%), Query Frame = 0


Query: 51  SVRPENDEKPVIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPE 110
           S   +N+   V+ L  +HGF+ +QIS +++ +PQ+L A+ EK+L PKL F QS+G SS E
Sbjct: 77  SFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSE 136

Query: 111 IAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTVRPNVE 170
           I ++V   P IL +   + I   +D+I+  L   EK+  + K    +   +L+    NV 
Sbjct: 137 ITEIVSSVPEILGKKGHKTISVYYDFIKDTL--LEKSSKNEKLCHSLPQGNLENKIRNVS 196

Query: 171 TLIQIGVPDSNIATIL--QYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRA 230
            L ++G+P   + ++L    QP   +    +F+E ++ V EMGF+P   KFV A+  +  
Sbjct: 197 VLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYK 256

Query: 231 MSKCTWRKKVEVY--------------KKW---------------------GWPEEEILV 290
           M++ T  +KV +Y              KKW                     G+  +E   
Sbjct: 257 MNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAK 316

Query: 291 AFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKKRIVPRGFVYQVLL 350
             +  P C+  S + +    +F V K+      V   PAV   SL+KRIVPRG V + L+
Sbjct: 317 MVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALM 376

Query: 351 SKGLIKKDV-NLPMVFESTESRFLDKFIDPH--KELIPGLLKLYK 356
           SKGL++ ++ ++  V   T+  FL++++  H  K+L+  L+ +Y+
Sbjct: 377 SKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYR 416

[Close]

BLAST of CmoCh13G003620 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 144.1 bits (362), Expect = 2.3e-34
Identity = 104/345 (30.14%), Postives = 175/345 (50.72%), Query Frame = 0


Query: 51  SVRPENDEKPVIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPE 110
           S   +N+   V+ L  +HGF+ +QIS +++ +PQ+L A+ EK+L PKL F QS+G SS E
Sbjct: 77  SFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSE 136

Query: 111 IAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTVRPNVE 170
           I ++V   P IL +   + I   +D+I+  L   EK+  + K    +   +L+    NV 
Sbjct: 137 ITEIVSSVPEILGKKGHKTISVYYDFIKDTL--LEKSSKNEKLCHSLPQGNLENKIRNVS 196

Query: 171 TLIQIGVPDSNIATIL--QYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRA 230
            L ++G+P   + ++L    QP   +    +F+E ++ V EMGF+P   KFV A+  +  
Sbjct: 197 VLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYK 256

Query: 231 MSKCTWRKKVEVY--------------KKW---------------------GWPEEEILV 290
           M++ T  +KV +Y              KKW                     G+  +E   
Sbjct: 257 MNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAK 316

Query: 291 AFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKKRIVPRGFVYQVLL 350
             +  P C+  S + +    +F V K+      V   PAV   SL+KRIVPRG V + L+
Sbjct: 317 MVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALM 376

Query: 351 SKGLIKKDV-NLPMVFESTESRFLDKFIDPH--KELIPGLLKLYK 356
           SKGL++ ++ ++  V   T+  FL++++  H  K+L+  L+ +Y+
Sbjct: 377 SKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYR 416

The following BLAST results are available for this feature:

BLAST of CmoCh13G003620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT96	1.1e-06	24.82	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
B6TGN4	2.6e-06	18.89	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
Q9SZL6	8.2e-05	22.41	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
F4IHL3	2.4e-04	22.28	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q6AUK6	2.4e-04	16.67	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]

BLAST of CmoCh13G003620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EK58	2.1e-200	100.00	uncharacterized protein LOC111434072 OS=Cucurbita moschata OX=3662 GN=LOC1114340...	[more]
A0A6J1IAL8	1.7e-186	93.11	transcription termination factor MTERF6, chloroplastic/mitochondrial-like OS=Cuc...	[more]
A0A6J1GVP2	1.0e-183	91.76	uncharacterized protein LOC111457902 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EZH0	3.9e-183	91.48	uncharacterized protein LOC111440613 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1F4G8	3.9e-183	91.48	uncharacterized protein LOC111440613 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CmoCh13G003620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927133.1	4.2e-200	100.00	uncharacterized protein LOC111434072 [Cucurbita moschata]	[more]
KAG6583690.1	1.7e-196	97.80	hypothetical protein SDJN03_19622, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023520325.1	1.9e-192	96.42	uncharacterized protein LOC111783639 [Cucurbita pepo subsp. pepo]	[more]
XP_022973145.1	3.5e-186	93.11	transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucur...	[more]
XP_022956116.1	2.1e-183	91.76	uncharacterized protein LOC111457902 isoform X2 [Cucurbita moschata]	[more]

BLAST of CmoCh13G003620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	4.4e-62	39.62	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	3.2e-52	33.84	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	2.2e-37	31.48	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	2.3e-34	30.14	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	2.3e-34	30.14	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 148..178 e-value: 1600.0 score: 2.3 coord: 76..107 e-value: 1.9E-5 score: 34.1 coord: 284..318 e-value: 7.0 score: 15.6 coord: 183..213 e-value: 670.0 score: 5.2 coord: 112..143 e-value: 5.8 score: 15.9 coord: 252..283 e-value: 4.0 score: 16.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 64..220 e-value: 2.3E-22 score: 79.3 coord: 229..336 e-value: 1.7E-14 score: 53.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 25..360
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 140..346 e-value: 1.3E-42 score: 147.8
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 25..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G003620.1	CmoCh13G003620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding